BLASTX nr result
ID: Rehmannia23_contig00026194
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00026194
(1011 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ17509.1| hypothetical protein PRUPE_ppa019701mg [Prunus pe... 231 3e-58
ref|XP_004243235.1| PREDICTED: ATP-dependent DNA helicase PIF1-l... 231 4e-58
gb|EOX92974.1| DNA repair and recombination protein pif1, putati... 221 4e-55
ref|XP_004306279.1| PREDICTED: DNA repair and recombination prot... 212 2e-52
ref|XP_006380622.1| hypothetical protein POPTR_0007s09900g [Popu... 207 5e-51
ref|XP_002303396.1| predicted protein [Populus trichocarpa] 207 5e-51
ref|XP_006586570.1| PREDICTED: ATP-dependent DNA helicase PIF1-l... 204 3e-50
ref|XP_002520397.1| conserved hypothetical protein [Ricinus comm... 191 3e-46
ref|XP_002975258.1| hypothetical protein SELMODRAFT_451567 [Sela... 151 3e-34
ref|XP_002987435.1| hypothetical protein SELMODRAFT_451566 [Sela... 151 3e-34
emb|CBJ33858.1| conserved unknown protein [Ectocarpus siliculosus] 146 1e-32
ref|XP_004351690.1| DNA helicase, putative [Acanthamoeba castell... 140 8e-31
ref|XP_004348568.1| Rrm3p helicase [Acanthamoeba castellanii str... 138 4e-30
emb|CBJ26927.1| conserved unknown protein [Ectocarpus siliculosus] 133 1e-28
ref|XP_004343985.1| zinc knuckle domain containing protein [Acan... 130 1e-27
ref|XP_647539.1| hypothetical protein DDB_G0268430 [Dictyosteliu... 127 9e-27
ref|XP_004367121.1| DNA repair and recombination protein PIF1 [D... 125 2e-26
dbj|GAA94773.1| hypothetical protein E5Q_01426 [Mixia osmundae I... 125 3e-26
dbj|GAA94772.1| hypothetical protein E5Q_01427 [Mixia osmundae I... 125 3e-26
gb|EKC25648.1| ATP-dependent DNA helicase PIF1 [Crassostrea gigas] 124 6e-26
>gb|EMJ17509.1| hypothetical protein PRUPE_ppa019701mg [Prunus persica]
Length = 549
Score = 231 bits (590), Expect = 3e-58
Identities = 123/225 (54%), Positives = 159/225 (70%), Gaps = 2/225 (0%)
Frame = +2
Query: 17 DVNKVNVEKMKSLEKEVYVYKAQDLGDEQWMRQLKSGIAPDELEICVGARVMLIKNINPW 196
DVN+VN ++ SL E+ VY A D G++ RQL+ GIAP E+ +C ARVML+KN+N W
Sbjct: 284 DVNRVNSSRLASLGNELVVYTAVDSGEDSLKRQLEQGIAPKEIALCEDARVMLVKNLNTW 343
Query: 197 RKLVNGATGTVMELCKVSENQYGMSNTCDHGDVLPLVKFDSGXXXXXXXXXXXXMDGDKV 376
R LVNGATGTV + + G++ CD G +LP+V+FDSG +GD V
Sbjct: 344 RGLVNGATGTVTGFYESED--VGVTRICDDG-LLPVVRFDSGLEMTIEPNTWTANEGDSV 400
Query: 377 VARRRQIPLILSWALSIHKCQGMTLDKLHTDLSRVFDFGMVYVALSRVRSLGGLYLSGLE 556
A+R Q+PLIL+WA SIHKCQGMTLD+LHTDLSR F+ GMVYVALSRVRSL GLYLSG +
Sbjct: 401 -AKREQLPLILAWASSIHKCQGMTLDRLHTDLSRAFENGMVYVALSRVRSLEGLYLSGFD 459
Query: 557 PSKIKAHPKVLEFYHGFNSEQDEKKK--ALIADRSESNSSDQTIT 685
PSKIK HPKV +FY+ F SEQD++++ A + S ++S + +IT
Sbjct: 460 PSKIKVHPKVAQFYNKFTSEQDKEEEINAPVGRNSTNSSCENSIT 504
>ref|XP_004243235.1| PREDICTED: ATP-dependent DNA helicase PIF1-like [Solanum
lycopersicum]
Length = 498
Score = 231 bits (588), Expect = 4e-58
Identities = 115/218 (52%), Positives = 159/218 (72%), Gaps = 4/218 (1%)
Frame = +2
Query: 8 RIVDVNKVNVEKMKSLEKEVYVYKAQDLGDEQWMRQLKSGIAPDELEICVGARVMLIKNI 187
RI DV++VN E++ L++ ++ Y+A D G + W +QLK+GIAP+ L++CVG+RV+L KNI
Sbjct: 279 RIEDVSRVNAERLDCLDEVLFNYQALDSGKDPWKKQLKNGIAPELLKLCVGSRVLLTKNI 338
Query: 188 NPWRKLVNGATGTVMELCKVSENQ----YGMSNTCDHGDVLPLVKFDSGXXXXXXXXXXX 355
+ LVNGATGT+++ V + + +S+ C +G++LP+V+FDSG
Sbjct: 339 DVVGGLVNGATGTILDFAAVQDTHKLYDHEISDICGNGNLLPVVRFDSGQELMIGVERWY 398
Query: 356 XMDGDKVVARRRQIPLILSWALSIHKCQGMTLDKLHTDLSRVFDFGMVYVALSRVRSLGG 535
M+GD+ VA R+QIPLIL+WALSIHKCQGMTL+ LHTDL RVF FGMVYVALSRV+SL G
Sbjct: 399 VMEGDEAVAMRKQIPLILAWALSIHKCQGMTLNNLHTDLYRVFGFGMVYVALSRVKSLDG 458
Query: 536 LYLSGLEPSKIKAHPKVLEFYHGFNSEQDEKKKALIAD 649
L L PSKIKA+PKVL+FY ++E+DE+K+ + D
Sbjct: 459 LNLVNFNPSKIKANPKVLQFYERLSAEKDEQKEDSVTD 496
>gb|EOX92974.1| DNA repair and recombination protein pif1, putative [Theobroma
cacao]
Length = 475
Score = 221 bits (563), Expect = 4e-55
Identities = 118/197 (59%), Positives = 143/197 (72%)
Frame = +2
Query: 8 RIVDVNKVNVEKMKSLEKEVYVYKAQDLGDEQWMRQLKSGIAPDELEICVGARVMLIKNI 187
RI DVNKVN EKMK+L +E +Y+A D G + W RQL G+APD+L +C GARVMLIKN+
Sbjct: 280 RIDDVNKVNEEKMKALSEEQVIYEAIDRGKKPWKRQLALGLAPDKLVLCKGARVMLIKNL 339
Query: 188 NPWRKLVNGATGTVMELCKVSENQYGMSNTCDHGDVLPLVKFDSGXXXXXXXXXXXXMDG 367
N +LVNGATG V +E + G + D+ +LP+VKFDSG M G
Sbjct: 340 NVMHRLVNGATGIVTGF---TETKGGTVLSPDN--LLPVVKFDSGPEMVIEPQKWYVMVG 394
Query: 368 DKVVARRRQIPLILSWALSIHKCQGMTLDKLHTDLSRVFDFGMVYVALSRVRSLGGLYLS 547
+ VA R Q+PL+L+WALSIHKCQGM+LD++HTDLSR F +GMVYVALSRVRSL GL+LS
Sbjct: 395 SRPVAWRLQLPLVLAWALSIHKCQGMSLDRIHTDLSRAFGYGMVYVALSRVRSLDGLHLS 454
Query: 548 GLEPSKIKAHPKVLEFY 598
G PSKIKAHPKVLEFY
Sbjct: 455 GFSPSKIKAHPKVLEFY 471
>ref|XP_004306279.1| PREDICTED: DNA repair and recombination protein pif1,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 515
Score = 212 bits (539), Expect = 2e-52
Identities = 118/222 (53%), Positives = 145/222 (65%)
Frame = +2
Query: 8 RIVDVNKVNVEKMKSLEKEVYVYKAQDLGDEQWMRQLKSGIAPDELEICVGARVMLIKNI 187
RI DVN+VN ++ SL E +Y A D G+E QL+ GIAP E+ +C ARVML+KN+
Sbjct: 280 RIEDVNRVNASRLVSLGNEFVIYTAIDSGEESRKSQLEQGIAPKEVTLCKDARVMLVKNL 339
Query: 188 NPWRKLVNGATGTVMELCKVSENQYGMSNTCDHGDVLPLVKFDSGXXXXXXXXXXXXMDG 367
N WR LVNGATGTV V +N+ ++ C LP+VKFDSG +G
Sbjct: 340 NTWRGLVNGATGTVQGFY-VPKNK-DIAGVCH---ALPIVKFDSGPEMLIEPETWAVTEG 394
Query: 368 DKVVARRRQIPLILSWALSIHKCQGMTLDKLHTDLSRVFDFGMVYVALSRVRSLGGLYLS 547
DKVVA R+Q+PLIL+WA SIHKCQGMTLD LHTDLS+ F+ GMVYVALSRVRSL GLYLS
Sbjct: 395 DKVVAERKQVPLILAWASSIHKCQGMTLDCLHTDLSKAFENGMVYVALSRVRSLEGLYLS 454
Query: 548 GLEPSKIKAHPKVLEFYHGFNSEQDEKKKALIADRSESNSSD 673
G KI HPKVL FY F+ E +++ D ++S D
Sbjct: 455 GFNRWKIMVHPKVLLFYKSFSGEVAQEEN----DDNDSQGQD 492
>ref|XP_006380622.1| hypothetical protein POPTR_0007s09900g [Populus trichocarpa]
gi|550334512|gb|ERP58419.1| hypothetical protein
POPTR_0007s09900g [Populus trichocarpa]
Length = 540
Score = 207 bits (527), Expect = 5e-51
Identities = 116/202 (57%), Positives = 130/202 (64%)
Frame = +2
Query: 8 RIVDVNKVNVEKMKSLEKEVYVYKAQDLGDEQWMRQLKSGIAPDELEICVGARVMLIKNI 187
RI DV KVN E+MKSL + Y A D G E +QL GI PD+L +CVGARVMLI N+
Sbjct: 328 RINDVEKVNEERMKSLGESTVTYAAADSGLEHRKKQLNQGIVPDQLVLCVGARVMLIMNL 387
Query: 188 NPWRKLVNGATGTVMELCKVSENQYGMSNTCDHGDVLPLVKFDSGXXXXXXXXXXXXMDG 367
N R L NGATGTV V + S+ + P VKFD G +G
Sbjct: 388 NIERNLCNGATGTVTGFVPVEDKNARKSDI-----LFPQVKFDRGPEILIEPQKFEIFEG 442
Query: 368 DKVVARRRQIPLILSWALSIHKCQGMTLDKLHTDLSRVFDFGMVYVALSRVRSLGGLYLS 547
D VVA R QIPLIL+WA+SIHKCQGMTLD TDLSR F +GMVYVALSRVRSL GL+LS
Sbjct: 443 DIVVAWRYQIPLILAWAISIHKCQGMTLDHAQTDLSRAFGYGMVYVALSRVRSLEGLHLS 502
Query: 548 GLEPSKIKAHPKVLEFYHGFNS 613
G PSKIKAHPKVL FY F S
Sbjct: 503 GFTPSKIKAHPKVLLFYKSFTS 524
>ref|XP_002303396.1| predicted protein [Populus trichocarpa]
Length = 493
Score = 207 bits (527), Expect = 5e-51
Identities = 116/202 (57%), Positives = 130/202 (64%)
Frame = +2
Query: 8 RIVDVNKVNVEKMKSLEKEVYVYKAQDLGDEQWMRQLKSGIAPDELEICVGARVMLIKNI 187
RI DV KVN E+MKSL + Y A D G E +QL GI PD+L +CVGARVMLI N+
Sbjct: 281 RINDVEKVNEERMKSLGESTVTYAAADSGLEHRKKQLNQGIVPDQLVLCVGARVMLIMNL 340
Query: 188 NPWRKLVNGATGTVMELCKVSENQYGMSNTCDHGDVLPLVKFDSGXXXXXXXXXXXXMDG 367
N R L NGATGTV V + S+ + P VKFD G +G
Sbjct: 341 NIERNLCNGATGTVTGFVPVEDKNARKSDI-----LFPQVKFDRGPEILIEPQKFEIFEG 395
Query: 368 DKVVARRRQIPLILSWALSIHKCQGMTLDKLHTDLSRVFDFGMVYVALSRVRSLGGLYLS 547
D VVA R QIPLIL+WA+SIHKCQGMTLD TDLSR F +GMVYVALSRVRSL GL+LS
Sbjct: 396 DIVVAWRYQIPLILAWAISIHKCQGMTLDHAQTDLSRAFGYGMVYVALSRVRSLEGLHLS 455
Query: 548 GLEPSKIKAHPKVLEFYHGFNS 613
G PSKIKAHPKVL FY F S
Sbjct: 456 GFTPSKIKAHPKVLLFYKSFTS 477
>ref|XP_006586570.1| PREDICTED: ATP-dependent DNA helicase PIF1-like [Glycine max]
Length = 516
Score = 204 bits (520), Expect = 3e-50
Identities = 109/212 (51%), Positives = 140/212 (66%)
Frame = +2
Query: 17 DVNKVNVEKMKSLEKEVYVYKAQDLGDEQWMRQLKSGIAPDELEICVGARVMLIKNINPW 196
DV +VN E+++SL+K+V VY+A D G W L+ GI PDE+ +C GARVML+KN++
Sbjct: 292 DVERVNDERLRSLQKDVVVYRAVDSGKGHWKGNLRYGIVPDEISLCEGARVMLVKNLDTE 351
Query: 197 RKLVNGATGTVMELCKVSENQYGMSNTCDHGDVLPLVKFDSGXXXXXXXXXXXXMDGDKV 376
LVNGATG V+ + +S C+ VLP+VKFD G MDG +V
Sbjct: 352 HGLVNGATGVVVGFSWSLGEEEHLSGICND-KVLPVVKFDGGKFLTIKPAKWHLMDGPEV 410
Query: 377 VARRRQIPLILSWALSIHKCQGMTLDKLHTDLSRVFDFGMVYVALSRVRSLGGLYLSGLE 556
VA R+QIPLIL+WA+SIHKCQGMTL+++HTDLSR F GMVYVALSRVRSL GL+LS
Sbjct: 411 VACRKQIPLILAWAMSIHKCQGMTLERVHTDLSRAFGCGMVYVALSRVRSLEGLHLSAFN 470
Query: 557 PSKIKAHPKVLEFYHGFNSEQDEKKKALIADR 652
SKIK +V FY SE + K+ ++ DR
Sbjct: 471 RSKIKVDQRVSRFYRSLASE--KSKEVMVVDR 500
>ref|XP_002520397.1| conserved hypothetical protein [Ricinus communis]
gi|223540444|gb|EEF42013.1| conserved hypothetical
protein [Ricinus communis]
Length = 512
Score = 191 bits (486), Expect = 3e-46
Identities = 105/204 (51%), Positives = 139/204 (68%)
Frame = +2
Query: 8 RIVDVNKVNVEKMKSLEKEVYVYKAQDLGDEQWMRQLKSGIAPDELEICVGARVMLIKNI 187
RI DVNKVN +++KSL +++ YKA D G + + LK G+A D+LEIC GARVMLIKN+
Sbjct: 266 RIEDVNKVNEKRLKSLGEKIVAYKAVDGGTRKEL--LKQGMAQDQLEICKGARVMLIKNL 323
Query: 188 NPWRKLVNGATGTVMELCKVSENQYGMSNTCDHGDVLPLVKFDSGXXXXXXXXXXXXMDG 367
+ W KL NGATGTV+ + ++ + ++LP++KFDSG +G
Sbjct: 324 HVWSKLCNGATGTVIGFVEPYDDVIDLFPD----NLLPVIKFDSGKVTVIKPQKWECYEG 379
Query: 368 DKVVARRRQIPLILSWALSIHKCQGMTLDKLHTDLSRVFDFGMVYVALSRVRSLGGLYLS 547
D VA R Q+PL L++ALSIHKCQGMT+D L+TDLSR F +GMVY LSR R++ G+ LS
Sbjct: 380 DDFVAWRSQLPLRLAYALSIHKCQGMTIDCLYTDLSRSFIYGMVYAVLSRGRTMKGIQLS 439
Query: 548 GLEPSKIKAHPKVLEFYHGFNSEQ 619
G EPS IKA+PKVL FY +S+Q
Sbjct: 440 GFEPSMIKANPKVLHFYDQLSSKQ 463
>ref|XP_002975258.1| hypothetical protein SELMODRAFT_451567 [Selaginella moellendorffii]
gi|300156832|gb|EFJ23459.1| hypothetical protein
SELMODRAFT_451567 [Selaginella moellendorffii]
Length = 580
Score = 151 bits (382), Expect = 3e-34
Identities = 89/201 (44%), Positives = 124/201 (61%), Gaps = 4/201 (1%)
Frame = +2
Query: 8 RIVDVNKVNVEKMKSLE--KEVYVYKAQDLGDEQWMRQLKSGIAPDELEICVGARVMLIK 181
R DV++ N +K++SL + + A+D G Q L A E+ + +GA+VMLIK
Sbjct: 381 RRADVDRENEQKLRSLNPSSKSVTFSAKDSGRTQ---MLNGSRAEAEITLAIGAQVMLIK 437
Query: 182 NINPWRKLVNGATGTVMELCKVSENQYGMSNTCDHGDVLPLVKFD--SGXXXXXXXXXXX 355
N+ + LVNGA G V+ +++ +S G LP+V+F+
Sbjct: 438 NLGTEQGLVNGARGIVVGFTAPEKSELRISP----GGGLPVVRFNHSGSSEWIIRPEAWS 493
Query: 356 XMDGDKVVARRRQIPLILSWALSIHKCQGMTLDKLHTDLSRVFDFGMVYVALSRVRSLGG 535
M+G+ VA+R Q+PLIL+WALS+HKCQGMTLD + TDLSR F++GMVYVALSRVRSL G
Sbjct: 494 VMEGEVEVAKRLQLPLILAWALSVHKCQGMTLDCVETDLSRTFEYGMVYVALSRVRSLHG 553
Query: 536 LYLSGLEPSKIKAHPKVLEFY 598
L L G +P KI+ HP+V+ FY
Sbjct: 554 LRLLGFDPLKIRVHPEVVTFY 574
>ref|XP_002987435.1| hypothetical protein SELMODRAFT_451566 [Selaginella moellendorffii]
gi|300144841|gb|EFJ11522.1| hypothetical protein
SELMODRAFT_451566 [Selaginella moellendorffii]
Length = 580
Score = 151 bits (382), Expect = 3e-34
Identities = 89/201 (44%), Positives = 124/201 (61%), Gaps = 4/201 (1%)
Frame = +2
Query: 8 RIVDVNKVNVEKMKSLE--KEVYVYKAQDLGDEQWMRQLKSGIAPDELEICVGARVMLIK 181
R DV++ N +K++SL + + A+D G Q L A E+ + +GA+VMLIK
Sbjct: 381 RRADVDRENEQKLRSLNPSSKSVTFSAKDSGRTQ---MLNGSRAEAEITLAIGAQVMLIK 437
Query: 182 NINPWRKLVNGATGTVMELCKVSENQYGMSNTCDHGDVLPLVKFD--SGXXXXXXXXXXX 355
N+ + LVNGA G V+ +++ +S G LP+V+F+
Sbjct: 438 NLGTEQGLVNGARGIVVGFTAPEKSELRISP----GGGLPVVRFNHSGSSEWIIRPEAWS 493
Query: 356 XMDGDKVVARRRQIPLILSWALSIHKCQGMTLDKLHTDLSRVFDFGMVYVALSRVRSLGG 535
M+G+ VA+R Q+PLIL+WALS+HKCQGMTLD + TDLSR F++GMVYVALSRVRSL G
Sbjct: 494 VMEGEVEVAKRLQLPLILAWALSVHKCQGMTLDCVETDLSRTFEYGMVYVALSRVRSLHG 553
Query: 536 LYLSGLEPSKIKAHPKVLEFY 598
L L G +P KI+ HP+V+ FY
Sbjct: 554 LRLLGFDPLKIRVHPEVVTFY 574
>emb|CBJ33858.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 435
Score = 146 bits (369), Expect = 1e-32
Identities = 89/206 (43%), Positives = 122/206 (59%), Gaps = 3/206 (1%)
Frame = +2
Query: 17 DVNKVNVEKMKSLEKEVYVYKAQDLGDE-QWMRQLKSGI-APDELEICVGARVMLIKNIN 190
DV KVN E++ L+ V KA++ G+ +RQL AP L + VGA+VML+KN+
Sbjct: 232 DVLKVNEERLGRLDGAEVVSKAENRGNRPDILRQLDDSCSAPATLRLKVGAQVMLVKNLA 291
Query: 191 PWRKLVNGATGTVMELCKVSENQYGMSNTCDHGDVLPLVKFDSGXXXXXXXXXXXXMDGD 370
R L NG+ G V+ K + + G LP+V+F SG G
Sbjct: 292 TGRGLANGSRGVVVRFAKSTSS----------GARLPVVRFASGLEEVIRPEEFHLYVGG 341
Query: 371 KVVARRRQIPLILSWALSIHKCQGMTLDKLHTDLSRVFDFGMVYVALSRVRSLGGLYLSG 550
+ VA RRQ+PL L+WALS+HK QGM+LD+ LSR F++G YVALSRVRSL GL + G
Sbjct: 342 QAVASRRQLPLALAWALSVHKSQGMSLDRASVCLSRAFEYGQAYVALSRVRSLEGLSVVG 401
Query: 551 -LEPSKIKAHPKVLEFYHGFNSEQDE 625
++PSKI+AHP+V+ FY + E+ E
Sbjct: 402 TIDPSKIRAHPRVVSFYRALSRERKE 427
>ref|XP_004351690.1| DNA helicase, putative [Acanthamoeba castellanii str. Neff]
gi|440801909|gb|ELR22913.1| DNA helicase, putative
[Acanthamoeba castellanii str. Neff]
Length = 1009
Score = 140 bits (353), Expect = 8e-31
Identities = 88/229 (38%), Positives = 126/229 (55%), Gaps = 2/229 (0%)
Frame = +2
Query: 17 DVNKVNVEKMKSLEKEVYVYKAQDLGDEQWMRQLKSGI-APDELEICVGARVMLIKNINP 193
DV+ NV+ ++ + E + + A+D G +++QL+ AP ELE+ VGA+V+L+KN++
Sbjct: 496 DVDAENVKCLQDINTESHTFYAEDEGTNPYLKQLQQNCPAPYELELKVGAQVILLKNLDF 555
Query: 194 WRKLVNGATGTVMELCKVSENQYGMSNTCDHG-DVLPLVKFDSGXXXXXXXXXXXXMDGD 370
+LVNGA G V+E K ++ P V F +G G
Sbjct: 556 ENELVNGARGLVVEFRKPDRSEREKERDKAFAKQEYPDVLFANGHRRILTPEQFSVEVGG 615
Query: 371 KVVARRRQIPLILSWALSIHKCQGMTLDKLHTDLSRVFDFGMVYVALSRVRSLGGLYLSG 550
V A R+Q+PL L+WALSIHK QGMT+ K+ L VF++G YVALSR SL GL L
Sbjct: 616 SVKASRKQVPLGLAWALSIHKSQGMTISKVELHLGNVFEYGQAYVALSRATSLEGLRLLS 675
Query: 551 LEPSKIKAHPKVLEFYHGFNSEQDEKKKALIADRSESNSSDQTITRKTS 697
P+ IKAHP+VL+FY Q + L AD+S ++ T T T+
Sbjct: 676 FNPAGIKAHPRVLQFY------QSLLGRPLFADQSSQRTTISTTTTTTT 718
>ref|XP_004348568.1| Rrm3p helicase [Acanthamoeba castellanii str. Neff]
gi|440801085|gb|ELR22110.1| Rrm3p helicase [Acanthamoeba
castellanii str. Neff]
Length = 805
Score = 138 bits (347), Expect = 4e-30
Identities = 88/225 (39%), Positives = 120/225 (53%), Gaps = 12/225 (5%)
Frame = +2
Query: 32 NVEKMKSLEKEVYVYKAQDLGDEQWMRQLKSGI-APDELEICVGARVMLIKNINPWRKLV 208
N E + +L + Y ++A D G E ++ +L+ AP+ LE+ VGA+V+L+ N+ LV
Sbjct: 533 NHECLAALPGKSYFFRAVDEGKEPFLGKLQKYCPAPETLELKVGAQVILLMNLAFSGGLV 592
Query: 209 NGATGTVMELCKVSENQYGMSNTCDHGDV-----------LPLVKFDSGXXXXXXXXXXX 355
NGA G V S T G P+V+F +G
Sbjct: 593 NGARGVVTGFASDSSEVTVAGRTSSSGKAKRKKVVLDATYYPVVRFTTGLERIILPEEWK 652
Query: 356 XMDGDKVVARRRQIPLILSWALSIHKCQGMTLDKLHTDLSRVFDFGMVYVALSRVRSLGG 535
G K VA R QIPL L+WALSIHK QGMTL K+ +LS VF +G YVALSR ++L G
Sbjct: 653 SEVGPKKVASRTQIPLNLAWALSIHKSQGMTLSKVEMNLSHVFAYGQAYVALSRAQNLEG 712
Query: 536 LYLSGLEPSKIKAHPKVLEFYHGFNSEQDEKKKALIADRSESNSS 670
LYL G E K++AHP+VLE+Y F+S ++ R S+SS
Sbjct: 713 LYLMGFEAGKVRAHPRVLEYYRRFSSSVALRRTGPSQPRPSSSSS 757
>emb|CBJ26927.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 823
Score = 133 bits (334), Expect = 1e-28
Identities = 77/202 (38%), Positives = 118/202 (58%), Gaps = 6/202 (2%)
Frame = +2
Query: 17 DVNKVNVEKMKSLEKEVYVYKAQDLGDEQWMRQLKSGIAPDE-LEICVGARVMLIKNINP 193
DV+++NVE+++ L+ Y+A+D GD+ ++ QL+ A + +E+ VGA+V+L+KN++
Sbjct: 468 DVDRLNVEELQKLQGRAEFYEAEDNGDQMYLTQLQKHCAAGQTIELKVGAKVLLLKNLDS 527
Query: 194 WRKLVNGATGTVMELCKVSENQYGMSNTCDHGDVLPLVKFDSGXXXXXXXXXXXXMD--- 364
+LVNGATG V E + S G LP+V+FD+ +
Sbjct: 528 SSQLVNGATGVVKEFVEAS------------GRRLPMVEFDTIEGGGKVVSVISEEEWTV 575
Query: 365 --GDKVVARRRQIPLILSWALSIHKCQGMTLDKLHTDLSRVFDFGMVYVALSRVRSLGGL 538
GD+ +ARR Q+PL L+WALS+HK QGMT+ + +F+FG YVALSR +L GL
Sbjct: 576 SLGDREMARRVQLPLRLAWALSVHKSQGMTIAHVMVSTRGMFEFGQAYVALSRATTLDGL 635
Query: 539 YLSGLEPSKIKAHPKVLEFYHG 604
+L + +KAH V +FY G
Sbjct: 636 HLVEFQKGVVKAHESVKKFYAG 657
>ref|XP_004343985.1| zinc knuckle domain containing protein [Acanthamoeba castellanii str.
Neff] gi|440799538|gb|ELR20582.1| zinc knuckle domain
containing protein [Acanthamoeba castellanii str. Neff]
Length = 668
Score = 130 bits (326), Expect = 1e-27
Identities = 79/206 (38%), Positives = 114/206 (55%), Gaps = 1/206 (0%)
Frame = +2
Query: 17 DVNKVNVEKMKSLEKEVYVYKAQDLGDEQWMRQL-KSGIAPDELEICVGARVMLIKNINP 193
DV+ N +++ L VY+A D G E + L ++ APD LE+ + A+V+L+KN++
Sbjct: 458 DVDGENTKRLAELAGTSRVYRAVDSGVEPYRSMLARNCSAPDVLELKLNAQVILLKNLDS 517
Query: 194 WRKLVNGATGTVMELCKVSENQYGMSNTCDHGDVLPLVKFDSGXXXXXXXXXXXXMDGDK 373
+LVNGA G V++ K Q + D P V F SG +
Sbjct: 518 ALELVNGARGVVVDF-KKPVKQDNKEESYDESKEYPEVLFTSGVRRLITPEEWNIGVAGE 576
Query: 374 VVARRRQIPLILSWALSIHKCQGMTLDKLHTDLSRVFDFGMVYVALSRVRSLGGLYLSGL 553
A R Q PL L+WALSIHK QGM++ K+ DL +V+++G YVALSR SL GLY+ L
Sbjct: 577 PQAWRVQCPLALAWALSIHKAQGMSISKVQMDLGKVWEYGQGYVALSRATSLDGLYIMDL 636
Query: 554 EPSKIKAHPKVLEFYHGFNSEQDEKK 631
I AHPKVL+FY ++Q +++
Sbjct: 637 NEKGITAHPKVLQFYADMEAQQQQER 662
>ref|XP_647539.1| hypothetical protein DDB_G0268430 [Dictyostelium discoideum AX4]
gi|60475733|gb|EAL73668.1| hypothetical protein
DDB_G0268430 [Dictyostelium discoideum AX4]
Length = 933
Score = 127 bits (318), Expect = 9e-27
Identities = 78/195 (40%), Positives = 108/195 (55%), Gaps = 1/195 (0%)
Frame = +2
Query: 20 VNKVNVEKMKSLEKEVYVYKAQDLGDEQWMRQLKSGIAPDELEICVGARVMLIKNINPWR 199
VN N ++ L E +YKA D + LK+ AP+ L + +GA+V+LIKN++
Sbjct: 743 VNNENEHRLSILNTEARIYKANDNFQPNYADSLKNCPAPETLTLKIGAQVILIKNLDMEN 802
Query: 200 KLVNGATGTVMELCKVSENQYGMSNTCDHGDVLPLVKFDSGXXXXXXXXXXXXMDGDKVV 379
+LVNG+ G V++ S + + LP+VKF +G G+ V+
Sbjct: 803 ELVNGSRGVVIDWTDSSLSP-------SKEESLPIVKFTNGLTRIIGREVWRNEFGEIVI 855
Query: 380 ARRRQIPLILSWALSIHKCQGMTLDKLHTDLSRVFDFGMVYVALSRVRSLGGLYL-SGLE 556
+ RRQIPL+L+WALSIHK QGMT+DKL +L +F+ G YVALSR L GL L S +
Sbjct: 856 SSRRQIPLMLAWALSIHKSQGMTIDKLVINLDGIFENGQTYVALSRSSGLNGLQLVSKFK 915
Query: 557 PSKIKAHPKVLEFYH 601
S IK V FYH
Sbjct: 916 KSHIKVDENVKTFYH 930
>ref|XP_004367121.1| DNA repair and recombination protein PIF1 [Dictyostelium
fasciculatum] gi|328871768|gb|EGG20138.1| DNA repair and
recombination protein PIF1 [Dictyostelium fasciculatum]
Length = 1927
Score = 125 bits (315), Expect = 2e-26
Identities = 83/245 (33%), Positives = 129/245 (52%), Gaps = 10/245 (4%)
Frame = +2
Query: 14 VDVNKVNVEKMKSLEKEVYVYKAQDLGDEQWMRQLKSGIAPDELEICVGARVMLIKNINP 193
V+V++ N++++ + ++ Y +KA D GD Q M + AP+ +++ GA+V+L+ N +
Sbjct: 596 VNVHEENIKQLALINEKEYTFKADDYGDPQHMG-FTNCQAPEIVKLKTGAQVLLMVNQDF 654
Query: 194 WRKLVNGATGTVMELCKVSENQYGMSNTCDHGDVLPLVKFDSGXXXXXXXXXXXXMDG-- 367
+KLVNG+ G ++ + SN +LP+VKF+SG +
Sbjct: 655 KKKLVNGSRGVIVG--------WESSNESKDELLLPIVKFNSGIQKTIKRHTWELEERIL 706
Query: 368 -------DKVVARRRQIPLILSWALSIHKCQGMTLDKLHTDLSRVFDFGMVYVALSRVRS 526
+V+A R QIPLIL+WA+SIHK QGMT+DKL +L VF FG YV+LSR S
Sbjct: 707 YRKEEKVREVIASRTQIPLILAWAISIHKSQGMTIDKLSINLDGVFTFGQTYVSLSRATS 766
Query: 527 LGGLYLS-GLEPSKIKAHPKVLEFYHGFNSEQDEKKKALIADRSESNSSDQTITRKTSKK 703
L GL L + + + H KV+EFY K + E ++ I ++T KK
Sbjct: 767 LDGLNLQIPITSAHVSTHEKVIEFYDQMKKNNMIKAQEPKKIEEEKEKIEEDIVQQTLKK 826
Query: 704 *RISH 718
+ H
Sbjct: 827 SKTEH 831
>dbj|GAA94773.1| hypothetical protein E5Q_01426 [Mixia osmundae IAM 14324]
Length = 705
Score = 125 bits (314), Expect = 3e-26
Identities = 80/226 (35%), Positives = 121/226 (53%), Gaps = 33/226 (14%)
Frame = +2
Query: 20 VNKVNVEKMKSLEKEVYVYKAQDLGD---EQWMRQLKSGIAPDELEICVGARVMLIKNIN 190
V + N K++SL E +++ A+D G E R L+S +AP++L + V A+VM++KN+
Sbjct: 475 VEQANQTKLRSLPGEEHIFTAEDSGTAEVEARRRILESMMAPEKLVLKVDAQVMMLKNM- 533
Query: 191 PWRKLVNGATGTVMELCKVSENQYGMSNTC--------------------------DHGD 292
P LVNG+ GTV+E + + Q ++N G+
Sbjct: 534 PDCGLVNGSVGTVIEFMTLQQYQASLTNRDRSMTPVIGRERSMTPAREERAESSGPSSGE 593
Query: 293 VLPLVKFDSGXXXXXXXXXXXX----MDGDKVVARRRQIPLILSWALSIHKCQGMTLDKL 460
LP+V++ G +G+ V ARRRQ+PL+LSWA+SIHK QG T+ +L
Sbjct: 594 KLPVVRWSLGSGSTMDMLVSREDFKVEEGETVKARRRQLPLLLSWAMSIHKAQGQTIQRL 653
Query: 461 HTDLSRVFDFGMVYVALSRVRSLGGLYLSGLEPSKIKAHPKVLEFY 598
DL++VF+ G YVALSR SL + PSK+ HPKV+++Y
Sbjct: 654 KCDLAKVFERGQAYVALSRACSLESTQILNFNPSKVTTHPKVVKWY 699
>dbj|GAA94772.1| hypothetical protein E5Q_01427 [Mixia osmundae IAM 14324]
Length = 702
Score = 125 bits (314), Expect = 3e-26
Identities = 80/226 (35%), Positives = 121/226 (53%), Gaps = 33/226 (14%)
Frame = +2
Query: 20 VNKVNVEKMKSLEKEVYVYKAQDLGD---EQWMRQLKSGIAPDELEICVGARVMLIKNIN 190
V + N K++SL E +++ A+D G E R L+S +AP++L + V A+VM++KN+
Sbjct: 472 VEQANQTKLRSLPGEEHIFTAEDSGTAEVEARRRILESMMAPEKLVLKVDAQVMMLKNM- 530
Query: 191 PWRKLVNGATGTVMELCKVSENQYGMSNTC--------------------------DHGD 292
P LVNG+ GTV+E + + Q ++N G+
Sbjct: 531 PDCGLVNGSVGTVIEFMTLQQYQASLTNRDRSMTPVIGRERSMTPAREERAESSGPSSGE 590
Query: 293 VLPLVKFDSGXXXXXXXXXXXX----MDGDKVVARRRQIPLILSWALSIHKCQGMTLDKL 460
LP+V++ G +G+ V ARRRQ+PL+LSWA+SIHK QG T+ +L
Sbjct: 591 KLPVVRWSLGSGSTMDMLVSREDFKVEEGETVKARRRQLPLLLSWAMSIHKAQGQTIQRL 650
Query: 461 HTDLSRVFDFGMVYVALSRVRSLGGLYLSGLEPSKIKAHPKVLEFY 598
DL++VF+ G YVALSR SL + PSK+ HPKV+++Y
Sbjct: 651 KCDLAKVFERGQAYVALSRACSLESTQILNFNPSKVTTHPKVVKWY 696
>gb|EKC25648.1| ATP-dependent DNA helicase PIF1 [Crassostrea gigas]
Length = 619
Score = 124 bits (311), Expect = 6e-26
Identities = 80/196 (40%), Positives = 108/196 (55%), Gaps = 1/196 (0%)
Frame = +2
Query: 17 DVNKVNVEKMKSLEKEVYVYKAQDLGDEQWMRQLKS-GIAPDELEICVGARVMLIKNINP 193
DVNK+N + L+ E + A D G+E + QL+ P ++ + VGA+VML KN++
Sbjct: 421 DVNKINQYHLGKLQGEEKTFVAVD-GEEAYKDQLEVLSPVPKKVVLKVGAQVMLAKNLDV 479
Query: 194 WRKLVNGATGTVMELCKVSENQYGMSNTCDHGDVLPLVKFDSGXXXXXXXXXXXXMDGDK 373
R LVNGA G V+ K +++ PLVKF SG
Sbjct: 480 QRGLVNGARGVVVGFDKKNQDY-------------PLVKFVSGEEEVIRPVRWTFKVSGA 526
Query: 374 VVARRRQIPLILSWALSIHKCQGMTLDKLHTDLSRVFDFGMVYVALSRVRSLGGLYLSGL 553
V R+Q+PL L+WA+SIHK QGMTLD + LSRVF+ G YVALSR +SL GL +
Sbjct: 527 VFINRKQVPLKLAWAISIHKSQGMTLDCVEMSLSRVFEAGQTYVALSRAKSLEGLRILDF 586
Query: 554 EPSKIKAHPKVLEFYH 601
+ S + A+P VL FYH
Sbjct: 587 DRSCVLANPDVLRFYH 602