BLASTX nr result

ID: Rehmannia23_contig00026190 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00026190
         (801 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006338578.1| PREDICTED: ATP-dependent RNA helicase-like p...    57   1e-05

>ref|XP_006338578.1| PREDICTED: ATP-dependent RNA helicase-like protein DB10-like [Solanum
            tuberosum]
          Length = 730

 Score = 56.6 bits (135), Expect = 1e-05
 Identities = 50/163 (30%), Positives = 72/163 (44%), Gaps = 5/163 (3%)
 Frame = +3

Query: 3    SDKGGG-FGSDREHSDGHDYGSSGHDTNATGGYQYKSFHESMMAAAKNGGGTNCSRSRSP 179
            S+K G  +GSD   SD   YG    D +A   +  +SFHE+MM A++     + SRSRSP
Sbjct: 574  SEKSGRVYGSDSRDSDR--YGDDSRDNDAPASFHARSFHETMMQASQR---RDRSRSRSP 628

Query: 180  DK-NLGWAENHGGAXXXXXXXXPERFDGS---APPRRSFHETMMEGARSLSSKNEQASPY 347
            ++   GW +    +         ERFD +    P   SFHE MM  +RS S+ + +    
Sbjct: 629  NRGGSGWGDRK--SRERSRSCSAERFDRARLQVPEGGSFHEAMMSFSRS-SAGDSREKVG 685

Query: 348  ANADSQSHHLEKSLPPPDDNEKEISRDNGVQLENEQLADGSNS 476
               D+     EK   PP       S D       E+  +G  +
Sbjct: 686  GPCDNFQKDWEKERSPPRSQGDGKSGDGPRANNGEEEGEGDET 728


Top