BLASTX nr result
ID: Rehmannia23_contig00026144
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00026144
(358 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containi... 114 1e-23
ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containi... 114 1e-23
emb|CBI36966.3| unnamed protein product [Vitis vinifera] 110 1e-22
ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containi... 110 1e-22
ref|XP_002515260.1| pentatricopeptide repeat-containing protein,... 110 2e-22
gb|EOX95298.1| S uncoupled 1 [Theobroma cacao] 108 7e-22
ref|XP_004240564.1| PREDICTED: pentatricopeptide repeat-containi... 108 1e-21
ref|XP_006355855.1| PREDICTED: pentatricopeptide repeat-containi... 106 4e-21
ref|XP_002320970.2| hypothetical protein POPTR_0014s11380g [Popu... 105 6e-21
ref|XP_006386713.1| hypothetical protein POPTR_0002s19470g [Popu... 104 1e-20
ref|XP_002301519.2| hypothetical protein POPTR_0002s19470g [Popu... 104 1e-20
ref|XP_004288538.1| PREDICTED: pentatricopeptide repeat-containi... 103 2e-20
gb|EMJ22752.1| hypothetical protein PRUPE_ppa001263mg [Prunus pe... 103 2e-20
ref|XP_004240565.1| PREDICTED: pentatricopeptide repeat-containi... 103 2e-20
ref|XP_006492356.1| PREDICTED: pentatricopeptide repeat-containi... 103 3e-20
ref|XP_006444533.1| hypothetical protein CICLE_v10018807mg [Citr... 103 3e-20
gb|EXB28566.1| hypothetical protein L484_009725 [Morus notabilis] 98 1e-18
ref|XP_006417966.1| hypothetical protein EUTSA_v10006755mg [Eutr... 96 5e-18
ref|XP_006841446.1| hypothetical protein AMTR_s00003p00075520 [A... 93 3e-17
ref|XP_006293642.1| hypothetical protein CARUB_v10022597mg [Caps... 87 2e-15
>ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 114 bits (286), Expect = 1e-23
Identities = 55/69 (79%), Positives = 62/69 (89%)
Frame = -3
Query: 356 SKVVGDGALKRTIEALLVSIGAPFRVAKCNIGRFISTGSVVAAWLKESGTLKVLVLQDDR 177
SKVVGDGAL+R IEALL S+GAPFRVAKCNIGR++STGSVVAAWLKESGTLK+LVL DDR
Sbjct: 790 SKVVGDGALRRAIEALLTSMGAPFRVAKCNIGRYVSTGSVVAAWLKESGTLKLLVLHDDR 849
Query: 176 TYPGNTRFD 150
T+P + D
Sbjct: 850 THPDSENMD 858
>ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 114 bits (285), Expect = 1e-23
Identities = 55/69 (79%), Positives = 61/69 (88%)
Frame = -3
Query: 356 SKVVGDGALKRTIEALLVSIGAPFRVAKCNIGRFISTGSVVAAWLKESGTLKVLVLQDDR 177
SKVVGDGAL+R IEALL S+GAPFRVAKCNIGR++STGSVVAAWLKESGTLK+LVL DDR
Sbjct: 790 SKVVGDGALRRAIEALLTSMGAPFRVAKCNIGRYVSTGSVVAAWLKESGTLKLLVLHDDR 849
Query: 176 TYPGNTRFD 150
T+P D
Sbjct: 850 THPDTENMD 858
>emb|CBI36966.3| unnamed protein product [Vitis vinifera]
Length = 730
Score = 110 bits (276), Expect = 1e-22
Identities = 54/67 (80%), Positives = 59/67 (88%)
Frame = -3
Query: 356 SKVVGDGALKRTIEALLVSIGAPFRVAKCNIGRFISTGSVVAAWLKESGTLKVLVLQDDR 177
SKVVGDGAL+R IEALL +GAPFRVAKCN+GRFISTG+VVAAWL+ESGTLKVLVL DDR
Sbjct: 652 SKVVGDGALRRAIEALLTGMGAPFRVAKCNLGRFISTGAVVAAWLRESGTLKVLVLHDDR 711
Query: 176 TYPGNTR 156
T P R
Sbjct: 712 TNPDRAR 718
>ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Vitis vinifera]
Length = 867
Score = 110 bits (276), Expect = 1e-22
Identities = 54/67 (80%), Positives = 59/67 (88%)
Frame = -3
Query: 356 SKVVGDGALKRTIEALLVSIGAPFRVAKCNIGRFISTGSVVAAWLKESGTLKVLVLQDDR 177
SKVVGDGAL+R IEALL +GAPFRVAKCN+GRFISTG+VVAAWL+ESGTLKVLVL DDR
Sbjct: 789 SKVVGDGALRRAIEALLTGMGAPFRVAKCNLGRFISTGAVVAAWLRESGTLKVLVLHDDR 848
Query: 176 TYPGNTR 156
T P R
Sbjct: 849 TNPDRAR 855
>ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223545740|gb|EEF47244.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 878
Score = 110 bits (275), Expect = 2e-22
Identities = 52/65 (80%), Positives = 60/65 (92%)
Frame = -3
Query: 356 SKVVGDGALKRTIEALLVSIGAPFRVAKCNIGRFISTGSVVAAWLKESGTLKVLVLQDDR 177
SKVVGD AL+R +EALL+ +GAPFR+AKCN+GRFISTGSVVAAWLKESGTL+VLVL DDR
Sbjct: 792 SKVVGDSALRRAVEALLIGMGAPFRLAKCNLGRFISTGSVVAAWLKESGTLEVLVLHDDR 851
Query: 176 TYPGN 162
T+P N
Sbjct: 852 THPEN 856
>gb|EOX95298.1| S uncoupled 1 [Theobroma cacao]
Length = 866
Score = 108 bits (270), Expect = 7e-22
Identities = 50/68 (73%), Positives = 59/68 (86%)
Frame = -3
Query: 356 SKVVGDGALKRTIEALLVSIGAPFRVAKCNIGRFISTGSVVAAWLKESGTLKVLVLQDDR 177
SKVVGDGAL+RT+E+L +GAPFR+AKCN+GRF+STG VV AWL+ESGTLK+LVL DDR
Sbjct: 788 SKVVGDGALRRTVESLFTGMGAPFRLAKCNLGRFVSTGPVVTAWLRESGTLKLLVLHDDR 847
Query: 176 TYPGNTRF 153
T P NT F
Sbjct: 848 TQPENTGF 855
>ref|XP_004240564.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like isoform 1 [Solanum lycopersicum]
Length = 841
Score = 108 bits (269), Expect = 1e-21
Identities = 52/69 (75%), Positives = 60/69 (86%)
Frame = -3
Query: 356 SKVVGDGALKRTIEALLVSIGAPFRVAKCNIGRFISTGSVVAAWLKESGTLKVLVLQDDR 177
SK+ GDGALKR IE LL SIGAPF++AKCNIGRFISTG+VV AWL+ESGTL+VLVLQDD
Sbjct: 763 SKITGDGALKRAIEGLLTSIGAPFQIAKCNIGRFISTGAVVTAWLRESGTLEVLVLQDDT 822
Query: 176 TYPGNTRFD 150
++ TRFD
Sbjct: 823 SHLRATRFD 831
>ref|XP_006355855.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Solanum tuberosum]
Length = 848
Score = 106 bits (264), Expect = 4e-21
Identities = 52/68 (76%), Positives = 59/68 (86%)
Frame = -3
Query: 356 SKVVGDGALKRTIEALLVSIGAPFRVAKCNIGRFISTGSVVAAWLKESGTLKVLVLQDDR 177
SK+ GDGALKR IE LL SIGAPF+VAKCNIGRFISTG+VV AWL+ESGTL+VLVLQDD
Sbjct: 770 SKITGDGALKRAIEGLLTSIGAPFQVAKCNIGRFISTGAVVTAWLRESGTLEVLVLQDDT 829
Query: 176 TYPGNTRF 153
++ TRF
Sbjct: 830 SHLRATRF 837
>ref|XP_002320970.2| hypothetical protein POPTR_0014s11380g [Populus trichocarpa]
gi|550323986|gb|EEE99285.2| hypothetical protein
POPTR_0014s11380g [Populus trichocarpa]
Length = 875
Score = 105 bits (262), Expect = 6e-21
Identities = 52/68 (76%), Positives = 58/68 (85%)
Frame = -3
Query: 356 SKVVGDGALKRTIEALLVSIGAPFRVAKCNIGRFISTGSVVAAWLKESGTLKVLVLQDDR 177
SKVVGD L+R IEALL+ +GAPFR+AKCN+GRFISTGSVVAAWL+ESGTLKVLVL D R
Sbjct: 797 SKVVGDSTLRRAIEALLMGMGAPFRLAKCNLGRFISTGSVVAAWLRESGTLKVLVLHDHR 856
Query: 176 TYPGNTRF 153
T N RF
Sbjct: 857 TEQENLRF 864
>ref|XP_006386713.1| hypothetical protein POPTR_0002s19470g [Populus trichocarpa]
gi|550345388|gb|ERP64510.1| hypothetical protein
POPTR_0002s19470g [Populus trichocarpa]
Length = 873
Score = 104 bits (260), Expect = 1e-20
Identities = 50/68 (73%), Positives = 58/68 (85%)
Frame = -3
Query: 356 SKVVGDGALKRTIEALLVSIGAPFRVAKCNIGRFISTGSVVAAWLKESGTLKVLVLQDDR 177
SKVVGD L+R +EALL+ +GAPFR AKCN+GR ISTGSVVA+WL+ESGTLKVLVL DDR
Sbjct: 795 SKVVGDSTLRRAVEALLMGMGAPFRSAKCNLGRLISTGSVVASWLRESGTLKVLVLHDDR 854
Query: 176 TYPGNTRF 153
T+ N RF
Sbjct: 855 THQENLRF 862
>ref|XP_002301519.2| hypothetical protein POPTR_0002s19470g [Populus trichocarpa]
gi|550345387|gb|EEE80792.2| hypothetical protein
POPTR_0002s19470g [Populus trichocarpa]
Length = 864
Score = 104 bits (260), Expect = 1e-20
Identities = 50/68 (73%), Positives = 58/68 (85%)
Frame = -3
Query: 356 SKVVGDGALKRTIEALLVSIGAPFRVAKCNIGRFISTGSVVAAWLKESGTLKVLVLQDDR 177
SKVVGD L+R +EALL+ +GAPFR AKCN+GR ISTGSVVA+WL+ESGTLKVLVL DDR
Sbjct: 786 SKVVGDSTLRRAVEALLMGMGAPFRSAKCNLGRLISTGSVVASWLRESGTLKVLVLHDDR 845
Query: 176 TYPGNTRF 153
T+ N RF
Sbjct: 846 THQENLRF 853
>ref|XP_004288538.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 870
Score = 103 bits (258), Expect = 2e-20
Identities = 50/68 (73%), Positives = 57/68 (83%)
Frame = -3
Query: 356 SKVVGDGALKRTIEALLVSIGAPFRVAKCNIGRFISTGSVVAAWLKESGTLKVLVLQDDR 177
SKVVGD AL+R +EALL S+GAPFRV +CNIGRFISTGSV AAWLKESGTL+VL+L DDR
Sbjct: 792 SKVVGDSALRRAVEALLTSMGAPFRVHECNIGRFISTGSVAAAWLKESGTLEVLMLHDDR 851
Query: 176 TYPGNTRF 153
P + F
Sbjct: 852 AEPNSANF 859
>gb|EMJ22752.1| hypothetical protein PRUPE_ppa001263mg [Prunus persica]
Length = 868
Score = 103 bits (258), Expect = 2e-20
Identities = 50/63 (79%), Positives = 56/63 (88%)
Frame = -3
Query: 356 SKVVGDGALKRTIEALLVSIGAPFRVAKCNIGRFISTGSVVAAWLKESGTLKVLVLQDDR 177
SKVVGD L+R IEALL S+GAPFRVAKCN+GRFISTGS+ AAWL+ESGTL+VLVL DDR
Sbjct: 790 SKVVGDSTLRRAIEALLTSMGAPFRVAKCNLGRFISTGSMAAAWLRESGTLEVLVLHDDR 849
Query: 176 TYP 168
T P
Sbjct: 850 TCP 852
>ref|XP_004240565.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like isoform 2 [Solanum lycopersicum]
Length = 829
Score = 103 bits (257), Expect = 2e-20
Identities = 50/67 (74%), Positives = 58/67 (86%)
Frame = -3
Query: 356 SKVVGDGALKRTIEALLVSIGAPFRVAKCNIGRFISTGSVVAAWLKESGTLKVLVLQDDR 177
SK+ GDGALKR IE LL SIGAPF++AKCNIGRFISTG+VV AWL+ESGTL+VLVLQDD
Sbjct: 763 SKITGDGALKRAIEGLLTSIGAPFQIAKCNIGRFISTGAVVTAWLRESGTLEVLVLQDDT 822
Query: 176 TYPGNTR 156
++ TR
Sbjct: 823 SHLRATR 829
>ref|XP_006492356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Citrus sinensis]
Length = 877
Score = 103 bits (256), Expect = 3e-20
Identities = 49/69 (71%), Positives = 57/69 (82%)
Frame = -3
Query: 356 SKVVGDGALKRTIEALLVSIGAPFRVAKCNIGRFISTGSVVAAWLKESGTLKVLVLQDDR 177
SKVVGDGAL+R +E LL +GAPF VA CN+GRFISTG +VA+WL+ESGTLKVLVL DDR
Sbjct: 799 SKVVGDGALRRAVEVLLTGMGAPFWVANCNLGRFISTGPMVASWLRESGTLKVLVLHDDR 858
Query: 176 TYPGNTRFD 150
T+ N FD
Sbjct: 859 THSENAGFD 867
>ref|XP_006444533.1| hypothetical protein CICLE_v10018807mg [Citrus clementina]
gi|557546795|gb|ESR57773.1| hypothetical protein
CICLE_v10018807mg [Citrus clementina]
Length = 877
Score = 103 bits (256), Expect = 3e-20
Identities = 49/69 (71%), Positives = 57/69 (82%)
Frame = -3
Query: 356 SKVVGDGALKRTIEALLVSIGAPFRVAKCNIGRFISTGSVVAAWLKESGTLKVLVLQDDR 177
SKVVGDGAL+R +E LL +GAPF VA CN+GRFISTG +VA+WL+ESGTLKVLVL DDR
Sbjct: 799 SKVVGDGALRRAVEVLLTGMGAPFWVANCNLGRFISTGPMVASWLRESGTLKVLVLHDDR 858
Query: 176 TYPGNTRFD 150
T+ N FD
Sbjct: 859 THSENAGFD 867
>gb|EXB28566.1| hypothetical protein L484_009725 [Morus notabilis]
Length = 871
Score = 97.8 bits (242), Expect = 1e-18
Identities = 46/67 (68%), Positives = 55/67 (82%)
Frame = -3
Query: 356 SKVVGDGALKRTIEALLVSIGAPFRVAKCNIGRFISTGSVVAAWLKESGTLKVLVLQDDR 177
SKVVGD AL+R IE+LL+S+GAPF AKCN+GRF S G +VA WLKESGTLKVLVL DDR
Sbjct: 794 SKVVGDSALRRAIESLLISMGAPFEAAKCNLGRFTSPGPMVAGWLKESGTLKVLVLHDDR 853
Query: 176 TYPGNTR 156
++ N +
Sbjct: 854 SHSQNAK 860
>ref|XP_006417966.1| hypothetical protein EUTSA_v10006755mg [Eutrema salsugineum]
gi|557095737|gb|ESQ36319.1| hypothetical protein
EUTSA_v10006755mg [Eutrema salsugineum]
Length = 895
Score = 95.9 bits (237), Expect = 5e-18
Identities = 44/60 (73%), Positives = 54/60 (90%)
Frame = -3
Query: 356 SKVVGDGALKRTIEALLVSIGAPFRVAKCNIGRFISTGSVVAAWLKESGTLKVLVLQDDR 177
SKV+GDG L+R +EALL +GAPF VAKCN+GRF+S+GSVVAAWL+ESGTLKVLVL+D +
Sbjct: 826 SKVMGDGTLRRAVEALLRGMGAPFHVAKCNVGRFVSSGSVVAAWLRESGTLKVLVLEDHK 885
>ref|XP_006841446.1| hypothetical protein AMTR_s00003p00075520 [Amborella trichopoda]
gi|548843467|gb|ERN03121.1| hypothetical protein
AMTR_s00003p00075520 [Amborella trichopoda]
Length = 857
Score = 93.2 bits (230), Expect = 3e-17
Identities = 45/63 (71%), Positives = 53/63 (84%)
Frame = -3
Query: 356 SKVVGDGALKRTIEALLVSIGAPFRVAKCNIGRFISTGSVVAAWLKESGTLKVLVLQDDR 177
SKV GD +L++ IEALL SIGAPF VAK N+GRFISTG+VV AWLKES TLK+L+L D+R
Sbjct: 780 SKVAGDSSLRKAIEALLTSIGAPFEVAKFNVGRFISTGAVVGAWLKESRTLKLLILHDER 839
Query: 176 TYP 168
T P
Sbjct: 840 TDP 842
>ref|XP_006293642.1| hypothetical protein CARUB_v10022597mg [Capsella rubella]
gi|482562350|gb|EOA26540.1| hypothetical protein
CARUB_v10022597mg [Capsella rubella]
Length = 932
Score = 87.4 bits (215), Expect = 2e-15
Identities = 40/61 (65%), Positives = 51/61 (83%)
Frame = -3
Query: 356 SKVVGDGALKRTIEALLVSIGAPFRVAKCNIGRFISTGSVVAAWLKESGTLKVLVLQDDR 177
SKVVGDGAL+R +E LL + APF ++KCN+GRFIS+GSVVA WL+ES TLK+L+L D +
Sbjct: 845 SKVVGDGALRRAVEVLLRGMDAPFHLSKCNMGRFISSGSVVATWLRESATLKLLILHDHK 904
Query: 176 T 174
T
Sbjct: 905 T 905