BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00026020
         (428 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006348098.1| PREDICTED: pentatricopeptide repeat-containi...    97   2e-18
ref|XP_006494311.1| PREDICTED: pentatricopeptide repeat-containi...    93   4e-17
ref|XP_002280513.1| PREDICTED: pentatricopeptide repeat-containi...    93   4e-17
ref|XP_006451265.1| hypothetical protein CICLE_v10008215mg [Citr...    91   1e-16
gb|EPS67797.1| hypothetical protein M569_06976 [Genlisea aurea]        88   1e-15
ref|XP_004307867.1| PREDICTED: pentatricopeptide repeat-containi...    87   3e-15
ref|XP_002332354.1| predicted protein [Populus trichocarpa]            87   3e-15
ref|XP_002514235.1| pentatricopeptide repeat-containing protein,...    84   2e-14
gb|AFK47126.1| unknown [Medicago truncatula]                           78   1e-12
ref|XP_003630737.1| Pentatricopeptide repeat-containing protein ...    78   1e-12
ref|XP_004162737.1| PREDICTED: pentatricopeptide repeat-containi...    77   2e-12
ref|XP_004135378.1| PREDICTED: pentatricopeptide repeat-containi...    77   3e-12
gb|ESW32292.1| hypothetical protein PHAVU_002G309900g [Phaseolus...    75   1e-11
ref|XP_004503475.1| PREDICTED: pentatricopeptide repeat-containi...    72   6e-11
ref|NP_177842.1| pentatricopeptide repeat-containing protein [Ar...    69   5e-10
ref|XP_002889127.1| pentatricopeptide repeat-containing protein ...    65   7e-09
ref|XP_006300895.1| hypothetical protein CARUB_v10021262mg [Caps...    65   1e-08
ref|XP_006390118.1| hypothetical protein EUTSA_v10018483mg [Eutr...    62   6e-08
ref|XP_004233792.1| PREDICTED: uncharacterized protein LOC101257...    60   2e-07

>ref|XP_006348098.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77170-like [Solanum tuberosum]
          Length = 456

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 47/89 (52%), Positives = 59/89 (66%)
 Frame = +2

Query: 158 ISHQLPTFPHASHQAIPDNGKAIALQVSNCANLKQLRQIFAHIIRTHFLQLYPYSFHYNN 337
           +SH L T    +   +  N K IA ++SNC NL  L QI++ IIR HFL+LYP  FH+NN
Sbjct: 21  LSHSLAT----ATNILDSNDKIIATRISNCNNLHHLDQIYSQIIRNHFLELYPVQFHWNN 76

Query: 338 ISRIYSRLESPREALHVYIAMCRAGIKPD 424
           I R Y+RL SP  ALHVYI M R G++PD
Sbjct: 77  IIRSYTRLNSPSNALHVYITMSRTGVRPD 105


>ref|XP_006494311.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77170-like [Citrus sinensis]
          Length = 471

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 42/72 (58%), Positives = 54/72 (75%)
 Frame = +2

Query: 209 DNGKAIALQVSNCANLKQLRQIFAHIIRTHFLQLYPYSFHYNNISRIYSRLESPREALHV 388
           D  K +A Q+S C NL QL QI+AHIIRTH L  Y  +FH+NNI R+Y+RLE+P++AL +
Sbjct: 49  DPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDI 108

Query: 389 YIAMCRAGIKPD 424
           YI M RAG+ PD
Sbjct: 109 YIFMSRAGVLPD 120


>ref|XP_002280513.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77170
           [Vitis vinifera] gi|297738768|emb|CBI28013.3| unnamed
           protein product [Vitis vinifera]
          Length = 479

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 46/84 (54%), Positives = 56/84 (66%)
 Frame = +2

Query: 173 PTFPHASHQAIPDNGKAIALQVSNCANLKQLRQIFAHIIRTHFLQLYPYSFHYNNISRIY 352
           PT    S   I D  + IA  +S CANL +L Q+ AHIIRTHFL+LYP  F +NNI R Y
Sbjct: 45  PTAHPPSPDPIQDTAQTIASHLSKCANLIELNQLLAHIIRTHFLELYPAPFQWNNIIRSY 104

Query: 353 SRLESPREALHVYIAMCRAGIKPD 424
           +RLE+   AL +YIAM RAG+ PD
Sbjct: 105 TRLEAHHYALSIYIAMSRAGVSPD 128


>ref|XP_006451265.1| hypothetical protein CICLE_v10008215mg [Citrus clementina]
           gi|557554491|gb|ESR64505.1| hypothetical protein
           CICLE_v10008215mg [Citrus clementina]
          Length = 461

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 41/69 (59%), Positives = 53/69 (76%)
 Frame = +2

Query: 218 KAIALQVSNCANLKQLRQIFAHIIRTHFLQLYPYSFHYNNISRIYSRLESPREALHVYIA 397
           K +A Q+S C NL QL QI+AHIIRTH L  Y  +FH+NNI R+Y+RLE+P++AL +YI 
Sbjct: 42  KIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIF 101

Query: 398 MCRAGIKPD 424
           M RAG+ PD
Sbjct: 102 MSRAGVLPD 110


>gb|EPS67797.1| hypothetical protein M569_06976 [Genlisea aurea]
          Length = 503

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 42/67 (62%), Positives = 53/67 (79%)
 Frame = +2

Query: 224 IALQVSNCANLKQLRQIFAHIIRTHFLQLYPYSFHYNNISRIYSRLESPREALHVYIAMC 403
           +AL VS  +NL++LRQ+FA + RTHFL L P SFHYNN+ RI+ RLESP+EAL +Y AM 
Sbjct: 84  VALLVSESSNLRRLRQVFALMFRTHFLALNPESFHYNNVIRIFIRLESPKEALRLYGAMR 143

Query: 404 RAGIKPD 424
           RAG+ PD
Sbjct: 144 RAGVPPD 150


>ref|XP_004307867.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77170-like [Fragaria vesca subsp. vesca]
          Length = 468

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 40/83 (48%), Positives = 58/83 (69%)
 Frame = +2

Query: 176 TFPHASHQAIPDNGKAIALQVSNCANLKQLRQIFAHIIRTHFLQLYPYSFHYNNISRIYS 355
           T P+    + PD  + +A+Q+SNC+ + QL QI+  +IRT FL LYP  FH+NN+ R Y+
Sbjct: 35  TTPNVESPSTPDP-ETLAIQLSNCSCVSQLDQIYCRVIRTQFLHLYPAPFHWNNLIRSYT 93

Query: 356 RLESPREALHVYIAMCRAGIKPD 424
           R ++P E+L VY+AM RAG+ PD
Sbjct: 94  RRDAPTESLFVYVAMSRAGVLPD 116


>ref|XP_002332354.1| predicted protein [Populus trichocarpa]
          Length = 254

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 37/72 (51%), Positives = 52/72 (72%)
 Frame = +2

Query: 209 DNGKAIALQVSNCANLKQLRQIFAHIIRTHFLQLYPYSFHYNNISRIYSRLESPREALHV 388
           D  K IA Q+SNC +L++L Q +AH+IRTH L +Y   FH+NN+ R Y+RL +P +AL +
Sbjct: 4   DPSKTIATQLSNCTSLQELNQTYAHVIRTHVLDVYTAPFHWNNLIRCYTRLGAPNKALQI 63

Query: 389 YIAMCRAGIKPD 424
           Y++M  AGI PD
Sbjct: 64  YVSMSHAGISPD 75


>ref|XP_002514235.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546691|gb|EEF48189.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 352

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 46/103 (44%), Positives = 59/103 (57%)
 Frame = +2

Query: 116 CHSYHNVAISLPQKISHQLPTFPHASHQAIPDNGKAIALQVSNCANLKQLRQIFAHIIRT 295
           CH  H++A         Q P  P    Q+  D  K  A Q SNC  L+ L QI+AHII +
Sbjct: 25  CHLNHSLAF-FSASSDAQTPPLP----QSAQDIAKWAATQSSNCTTLRDLNQIYAHIICS 79

Query: 296 HFLQLYPYSFHYNNISRIYSRLESPREALHVYIAMCRAGIKPD 424
             L  Y   FH+NNI R Y+RL++P +AL VYI+M RAG+ PD
Sbjct: 80  DLLHFYSAPFHWNNIIRSYTRLDAPVKALQVYISMSRAGVLPD 122


>gb|AFK47126.1| unknown [Medicago truncatula]
          Length = 447

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 35/68 (51%), Positives = 50/68 (73%)
 Frame = +2

Query: 224 IALQVSNCANLKQLRQIFAHIIRTHFLQLYPYSFHYNNISRIYSRLESPREALHVYIAMC 403
           IA  +SN   ++ L QI+AHI+ T FL+  P SF++NNI R Y+RLESP+ AL +Y++M 
Sbjct: 30  IATLLSNTTRIRDLNQIYAHILLTRFLESNPASFNWNNIIRSYTRLESPQNALRIYVSML 89

Query: 404 RAGIKPDK 427
           RAG+ PD+
Sbjct: 90  RAGVLPDR 97


>ref|XP_003630737.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355524759|gb|AET05213.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 447

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 35/68 (51%), Positives = 50/68 (73%)
 Frame = +2

Query: 224 IALQVSNCANLKQLRQIFAHIIRTHFLQLYPYSFHYNNISRIYSRLESPREALHVYIAMC 403
           IA  +SN   ++ L QI+AHI+ T FL+  P SF++NNI R Y+RLESP+ AL +Y++M 
Sbjct: 30  IATLLSNTTRIRDLNQIYAHILLTRFLESNPASFNWNNIIRSYTRLESPQNALRIYVSML 89

Query: 404 RAGIKPDK 427
           RAG+ PD+
Sbjct: 90  RAGVLPDR 97


>ref|XP_004162737.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77170-like [Cucumis sativus]
          Length = 614

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 37/72 (51%), Positives = 52/72 (72%)
 Frame = +2

Query: 209 DNGKAIALQVSNCANLKQLRQIFAHIIRTHFLQLYPYSFHYNNISRIYSRLESPREALHV 388
           D+ + +A  + NC N+ +L QI AH++RT+ L+ +P SF++N I R Y+RLE PR AL V
Sbjct: 192 DHARIVATLLMNCTNVLELYQIHAHVLRTNMLENHPSSFYWNIIIRSYTRLEVPRIALFV 251

Query: 389 YIAMCRAGIKPD 424
           YIAM +AGI PD
Sbjct: 252 YIAMLQAGILPD 263


>ref|XP_004135378.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77170-like [Cucumis sativus]
          Length = 609

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 37/72 (51%), Positives = 51/72 (70%)
 Frame = +2

Query: 209 DNGKAIALQVSNCANLKQLRQIFAHIIRTHFLQLYPYSFHYNNISRIYSRLESPREALHV 388
           D+ + +A  + NC N+ +L QI AH++RT+ L+ +P SF++N I R Y+RLE PR AL V
Sbjct: 187 DHARIVATLLMNCTNVLELYQIHAHVLRTNMLENHPSSFYWNIIIRSYTRLEVPRIALFV 246

Query: 389 YIAMCRAGIKPD 424
           YI M RAGI PD
Sbjct: 247 YIDMLRAGILPD 258


>gb|ESW32292.1| hypothetical protein PHAVU_002G309900g [Phaseolus vulgaris]
          Length = 423

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 30/67 (44%), Positives = 48/67 (71%)
 Frame = +2

Query: 224 IALQVSNCANLKQLRQIFAHIIRTHFLQLYPYSFHYNNISRIYSRLESPREALHVYIAMC 403
           +A  + NCA +++L +++AH++RTHF    P  F++NNI R Y+RLE+PR AL +++ M 
Sbjct: 40  VAAHLCNCATVRELNRVYAHVLRTHFFISNPAPFNWNNIIRSYTRLEAPRNALRIHVLML 99

Query: 404 RAGIKPD 424
           R G+ PD
Sbjct: 100 RNGVLPD 106


>ref|XP_004503475.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77170-like [Cicer arietinum]
          Length = 451

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 32/67 (47%), Positives = 47/67 (70%)
 Frame = +2

Query: 224 IALQVSNCANLKQLRQIFAHIIRTHFLQLYPYSFHYNNISRIYSRLESPREALHVYIAMC 403
           I   +SN   + +L Q++AH++RT FL+  P SF++NNI R Y+RLE+P  AL V++ M 
Sbjct: 34  ITTLLSNSTRIHELNQVYAHLLRTRFLESNPASFNWNNIIRAYTRLEAPLNALRVHVLML 93

Query: 404 RAGIKPD 424
           RAG+ PD
Sbjct: 94  RAGVLPD 100


>ref|NP_177842.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|122215262|sp|Q3ECB8.1|PP128_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g77170 gi|332197823|gb|AEE35944.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 467

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 38/118 (32%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
 Frame = +2

Query: 77  YSSKLSRIHCGSFCHSYHNVAISLPQKISHQLPTFPHASHQAIP-DNGKAIALQVSNCAN 253
           +S  +S++H      + H    ++  +++H + T   +     P D  K +A  +SNC +
Sbjct: 3   FSGLISKLHVHGTKRTNH---FTIFHRLNHFVTTSSSSVTPLSPQDRNKLLATLLSNCTS 59

Query: 254 LKQLRQIFAHIIRTHFLQLYPYSFHYNNISRIYSRLESPREALHVYIAMCRAGIKPDK 427
           L ++R+I   I R+  L  YP +F +NNI R Y R ESP +A+ VY+ M R+ + PD+
Sbjct: 60  LARVRRIHGDIFRSRILDQYPIAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDR 117


>ref|XP_002889127.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297334968|gb|EFH65386.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 466

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 42/125 (33%), Positives = 60/125 (48%), Gaps = 4/125 (3%)
 Frame = +2

Query: 65  FFQSYSSKLSRI----HCGSFCHSYHNVAISLPQKISHQLPTFPHASHQAIPDNGKAIAL 232
           FF    SKL       H   F    H V IS    I+   P           D  K +A 
Sbjct: 2   FFSGLISKLHGTKRTNHLKIFHRLNHFVTISSSSSITSLSPQ----------DRNKLLAT 51

Query: 233 QVSNCANLKQLRQIFAHIIRTHFLQLYPYSFHYNNISRIYSRLESPREALHVYIAMCRAG 412
            +SNC +L ++R+I   I R+  L  YP +F +NNI R Y R +SP +++ VY+ M R+ 
Sbjct: 52  LLSNCTSLARVRRIHGDIFRSCILDQYPIAFLWNNIMRSYIRHDSPLDSVQVYLGMVRSN 111

Query: 413 IKPDK 427
           + PD+
Sbjct: 112 VLPDR 116


>ref|XP_006300895.1| hypothetical protein CARUB_v10021262mg [Capsella rubella]
           gi|482569605|gb|EOA33793.1| hypothetical protein
           CARUB_v10021262mg [Capsella rubella]
          Length = 464

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 30/73 (41%), Positives = 45/73 (61%)
 Frame = +2

Query: 209 DNGKAIALQVSNCANLKQLRQIFAHIIRTHFLQLYPYSFHYNNISRIYSRLESPREALHV 388
           D  K +A  +SNC +L ++R+I   I R+  L  YP  F +NNI R Y R +SP +A+ V
Sbjct: 42  DRNKLLATLLSNCTSLARVRRIHGDIFRSRILDQYPIPFLWNNIMRSYIRHDSPLDAVQV 101

Query: 389 YIAMCRAGIKPDK 427
           Y+ M R+ + PD+
Sbjct: 102 YLDMVRSNVLPDR 114


>ref|XP_006390118.1| hypothetical protein EUTSA_v10018483mg [Eutrema salsugineum]
           gi|557086552|gb|ESQ27404.1| hypothetical protein
           EUTSA_v10018483mg [Eutrema salsugineum]
          Length = 476

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 39/126 (30%), Positives = 64/126 (50%), Gaps = 3/126 (2%)
 Frame = +2

Query: 59  MKFFQSYSSKLSRIHCGSFCHSYHNVAISL-PQKISHQLPTFPHASHQAIP--DNGKAIA 229
           M FF    S+L+ +   ++   +H    S+ P  I     +   +S  ++   D  K +A
Sbjct: 1   MVFFSGLGSRLNGVKKTNYLTIFHRSNHSITPAAIDEPYVSISSSSTTSLSPEDRSKFLA 60

Query: 230 LQVSNCANLKQLRQIFAHIIRTHFLQLYPYSFHYNNISRIYSRLESPREALHVYIAMCRA 409
             +SNC +L ++R+I   I R+  L     +F +NNI R Y R  SP +AL VY+ M R+
Sbjct: 61  TLLSNCNSLARVRRIHGDIFRSRILDEDRIAFLWNNIMRSYVRHGSPLDALQVYLGMVRS 120

Query: 410 GIKPDK 427
            + PD+
Sbjct: 121 NVSPDR 126


>ref|XP_004233792.1| PREDICTED: uncharacterized protein LOC101257235 [Solanum
            lycopersicum]
          Length = 1917

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
 Frame = +2

Query: 188  ASHQAIPDNGKAIALQVSNCANLKQLRQIFAHIIR--THFLQLYPYSFHYNNISRIYSRL 361
            ASH+++ D  + I L +     ++    +   +++     + LYP  FH+NNI R Y+RL
Sbjct: 1330 ASHRSLRDQFRRIFLWMMVTTQIETDMLLEFGVLKWSLQIVPLYPAQFHWNNIIRSYTRL 1389

Query: 362  ESPREALHVYIAMCRAGIKPD 424
             SP  ALHVYI M R G++PD
Sbjct: 1390 NSPTNALHVYITMSRTGVRPD 1410