BLASTX nr result

ID: Rehmannia23_contig00025720 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00025720
         (598 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285705.2| PREDICTED: LOW QUALITY PROTEIN: transcriptio...    39   4e-06
emb|CAN73178.1| hypothetical protein VITISV_039910 [Vitis vinifera]    39   4e-06
ref|XP_004485604.1| PREDICTED: transcription factor bHLH143-like...    43   9e-06

>ref|XP_002285705.2| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH145-like
           [Vitis vinifera]
          Length = 421

 Score = 38.5 bits (88), Expect(2) = 4e-06
 Identities = 18/39 (46%), Positives = 24/39 (61%)
 Frame = +1

Query: 34  IDDAPQKRFLIFDQSGNKTRLFFSPSFSSKSQIFASNTP 150
           I +  QKRFL+FDQSG++T L FS    +  Q   S +P
Sbjct: 174 ISECAQKRFLVFDQSGDQTTLVFSSVIGTPGQCLTSWSP 212



 Score = 38.1 bits (87), Expect(2) = 4e-06
 Identities = 23/56 (41%), Positives = 31/56 (55%)
 Frame = +3

Query: 270 STTPSSAKGLFGEMASTRVDQKFSMKPIIEERWDENNLADHGESEMFEDSEEINAL 437
           S  PS A  L G    T+ D  +   PI+ +  +EN   D  +SEM ED+EE+NAL
Sbjct: 211 SPKPSGAHNLSGGEEGTKRDLIYHQGPILTDESNENGGTDV-QSEMHEDTEELNAL 265


>emb|CAN73178.1| hypothetical protein VITISV_039910 [Vitis vinifera]
          Length = 402

 Score = 38.5 bits (88), Expect(2) = 4e-06
 Identities = 18/39 (46%), Positives = 24/39 (61%)
 Frame = +1

Query: 34  IDDAPQKRFLIFDQSGNKTRLFFSPSFSSKSQIFASNTP 150
           I +  QKRFL+FDQSG++T L FS    +  Q   S +P
Sbjct: 155 ISECAQKRFLVFDQSGDQTTLVFSSVIGTPGQCLTSWSP 193



 Score = 38.1 bits (87), Expect(2) = 4e-06
 Identities = 23/56 (41%), Positives = 31/56 (55%)
 Frame = +3

Query: 270 STTPSSAKGLFGEMASTRVDQKFSMKPIIEERWDENNLADHGESEMFEDSEEINAL 437
           S  PS A  L G    T+ D  +   PI+ +  +EN   D  +SEM ED+EE+NAL
Sbjct: 192 SPKPSGAHNLSGGEEGTKRDLIYHQGPILTDESNENGGTDV-QSEMHEDTEELNAL 246


>ref|XP_004485604.1| PREDICTED: transcription factor bHLH143-like [Cicer arietinum]
          Length = 350

 Score = 43.1 bits (100), Expect(2) = 9e-06
 Identities = 18/22 (81%), Positives = 21/22 (95%)
 Frame = +1

Query: 49  QKRFLIFDQSGNKTRLFFSPSF 114
           QK+F+IFDQSGNKTRLF+SP F
Sbjct: 99  QKKFIIFDQSGNKTRLFYSPVF 120



 Score = 32.3 bits (72), Expect(2) = 9e-06
 Identities = 34/118 (28%), Positives = 48/118 (40%), Gaps = 3/118 (2%)
 Frame = +3

Query: 228 PIIEEKWAENKIFASTTPSSAKGLFGEMASTRVDQKFSMKPIIEERWDENNLADH---GE 398
           P+++      K FA      A  +  E+ +T   QK   K    E  +++   DH    E
Sbjct: 121 PLVQSPIVTTKQFAQ-----ADDVNREVRATSYAQKHLPKYTFPEESEKDQ--DHVVNEE 173

Query: 399 SEMFEDSEEINALFXXXXXXXXXXXXXXXXXXXXXXXVTSTGQSPFIIEEGYNIDEEL 572
           SEM ED+EEINAL                        VTSTG SP   E+   + E++
Sbjct: 174 SEMHEDTEEINALL--------CSDDCDYDSDDYDDEVTSTGHSPLATEKTNLMQEQI 223


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