BLASTX nr result

ID: Rehmannia23_contig00025700 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00025700
         (425 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006375703.1| hypothetical protein POPTR_0013s00270g [Popu...    76   4e-12
ref|XP_006480331.1| PREDICTED: flap endonuclease 1-like isoform ...    70   4e-10
ref|XP_006480329.1| PREDICTED: flap endonuclease 1-like isoform ...    70   4e-10
ref|XP_006423952.1| hypothetical protein CICLE_v10028527mg [Citr...    70   4e-10
emb|CBI39682.3| unnamed protein product [Vitis vinifera]               69   6e-10
ref|XP_006358513.1| PREDICTED: flap endonuclease 1-like isoform ...    67   2e-09
gb|EOY11795.1| 5'-3' exonuclease family protein isoform 5, parti...    62   8e-08

>ref|XP_006375703.1| hypothetical protein POPTR_0013s00270g [Populus trichocarpa]
           gi|550324613|gb|ERP53500.1| hypothetical protein
           POPTR_0013s00270g [Populus trichocarpa]
          Length = 417

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 40/90 (44%), Positives = 55/90 (61%), Gaps = 3/90 (3%)
 Frame = -1

Query: 425 EKIKTAKNKSSRGRFESFFKPVVGTLGPAEGKGSRCVLAVPKPVVKLNKYFI---GASFH 255
           EKIK AKNKSS+GR ESFFKPV  T  P + KG++CVL  PKP +KL    +    ++  
Sbjct: 328 EKIKAAKNKSSQGRLESFFKPVANTSQPVKRKGTKCVLRPPKPAIKLKMLSLQVCSSTSV 387

Query: 254 SEAIGSIGLSSVDLCSNQYMLFPRNLCCGA 165
            + IGS+ + +++L S      PR +C  A
Sbjct: 388 PKTIGSLSMLTLNLFSKHSTTSPRGVCFSA 417


>ref|XP_006480331.1| PREDICTED: flap endonuclease 1-like isoform X3 [Citrus sinensis]
          Length = 396

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 40/89 (44%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
 Frame = -1

Query: 425 EKIKTAKNKSSRGRFESFFKPVVGTLGPAEGKGSRCVLAVPKPVVKLNKYFIGASFHS-- 252
           EKIK AKNKSS+GR ESFFKPV  T  P + KGS+CVL  PK  +K   + + A + S  
Sbjct: 308 EKIKAAKNKSSQGRLESFFKPVANTSAPIKRKGSKCVLQSPKQEIKPRIFSLQACYSSGP 367

Query: 251 EAIGSIGLSSVDLCSNQYMLFPRNLCCGA 165
           +  G + L ++DL S       R +C  A
Sbjct: 368 KLNGGLCLLTLDLGSKHSSPLGRGVCFSA 396


>ref|XP_006480329.1| PREDICTED: flap endonuclease 1-like isoform X1 [Citrus sinensis]
          Length = 418

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 40/89 (44%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
 Frame = -1

Query: 425 EKIKTAKNKSSRGRFESFFKPVVGTLGPAEGKGSRCVLAVPKPVVKLNKYFIGASFHS-- 252
           EKIK AKNKSS+GR ESFFKPV  T  P + KGS+CVL  PK  +K   + + A + S  
Sbjct: 330 EKIKAAKNKSSQGRLESFFKPVANTSAPIKRKGSKCVLQSPKQEIKPRIFSLQACYSSGP 389

Query: 251 EAIGSIGLSSVDLCSNQYMLFPRNLCCGA 165
           +  G + L ++DL S       R +C  A
Sbjct: 390 KLNGGLCLLTLDLGSKHSSPLGRGVCFSA 418


>ref|XP_006423952.1| hypothetical protein CICLE_v10028527mg [Citrus clementina]
           gi|567862598|ref|XP_006423953.1| hypothetical protein
           CICLE_v10028527mg [Citrus clementina]
           gi|568853361|ref|XP_006480330.1| PREDICTED: flap
           endonuclease 1-like isoform X2 [Citrus sinensis]
           gi|557525886|gb|ESR37192.1| hypothetical protein
           CICLE_v10028527mg [Citrus clementina]
           gi|557525887|gb|ESR37193.1| hypothetical protein
           CICLE_v10028527mg [Citrus clementina]
          Length = 416

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 40/89 (44%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
 Frame = -1

Query: 425 EKIKTAKNKSSRGRFESFFKPVVGTLGPAEGKGSRCVLAVPKPVVKLNKYFIGASFHS-- 252
           EKIK AKNKSS+GR ESFFKPV  T  P + KGS+CVL  PK  +K   + + A + S  
Sbjct: 328 EKIKAAKNKSSQGRLESFFKPVANTSAPIKRKGSKCVLQSPKQEIKPRIFSLQACYSSGP 387

Query: 251 EAIGSIGLSSVDLCSNQYMLFPRNLCCGA 165
           +  G + L ++DL S       R +C  A
Sbjct: 388 KLNGGLCLLTLDLGSKHSSPLGRGVCFSA 416


>emb|CBI39682.3| unnamed protein product [Vitis vinifera]
          Length = 416

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 40/89 (44%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
 Frame = -1

Query: 425 EKIKTAKNKSSRGRFESFFKPVVGTLGPAEGKGSRCVLAVPKPVVKLNKYFIGASFHSE- 249
           EKIKTAKNKSS+GR ESFFKPVV +  P + K S+C+L  PKP++K   +       S  
Sbjct: 328 EKIKTAKNKSSQGRLESFFKPVVSSSIPIKRKESKCMLGSPKPIIKHKIFTQQVCIQSRR 387

Query: 248 -AIGSIGLSSVDLCSNQYMLFPRNLCCGA 165
             IGS  + ++ L S       R +C GA
Sbjct: 388 YIIGSSSMPTLGLGSKHSTPLFRGVCFGA 416


>ref|XP_006358513.1| PREDICTED: flap endonuclease 1-like isoform X1 [Solanum tuberosum]
          Length = 411

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 38/86 (44%), Positives = 50/86 (58%)
 Frame = -1

Query: 425 EKIKTAKNKSSRGRFESFFKPVVGTLGPAEGKGSRCVLAVPKPVVKLNKYFIGASFHSEA 246
           EKIKTAKNKSS+GR ESFFKP V T  P + KG++CVL  P PV K     +        
Sbjct: 328 EKIKTAKNKSSQGRLESFFKP-VSTSAPVKRKGTKCVLVSPIPVTKFKT--LSLRSRPGV 384

Query: 245 IGSIGLSSVDLCSNQYMLFPRNLCCG 168
           +G +   S++L  N  +   R++C G
Sbjct: 385 LGKLSFPSLELGLNYSVPLSRHVCFG 410


>gb|EOY11795.1| 5'-3' exonuclease family protein isoform 5, partial [Theobroma
           cacao]
          Length = 414

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 29/46 (63%), Positives = 36/46 (78%)
 Frame = -1

Query: 425 EKIKTAKNKSSRGRFESFFKPVVGTLGPAEGKGSRCVLAVPKPVVK 288
           EKIK AKNKSS+GR ESFFKPV  T  P + KG++C+L  PKP++K
Sbjct: 328 EKIKAAKNKSSQGRLESFFKPVGNTSIPIKRKGTKCMLQFPKPMLK 373


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