BLASTX nr result
ID: Rehmannia23_contig00025686
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00025686
(1390 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOX96971.1| Cleavage and polyadenylation specificity factor 3... 616 e-174
gb|EPS64393.1| hypothetical protein M569_10389, partial [Genlise... 615 e-173
ref|XP_006448924.1| hypothetical protein CICLE_v10014454mg [Citr... 613 e-173
ref|XP_006468290.1| PREDICTED: cleavage and polyadenylation spec... 607 e-171
ref|XP_004231555.1| PREDICTED: cleavage and polyadenylation spec... 605 e-170
ref|XP_002523201.1| conserved hypothetical protein [Ricinus comm... 603 e-170
ref|XP_006359103.1| PREDICTED: cleavage and polyadenylation spec... 602 e-170
ref|XP_003546247.1| PREDICTED: cleavage and polyadenylation spec... 601 e-169
gb|ESW19498.1| hypothetical protein PHAVU_006G130200g [Phaseolus... 595 e-167
ref|XP_002281594.1| PREDICTED: cleavage and polyadenylation spec... 595 e-167
ref|XP_004486563.1| PREDICTED: cleavage and polyadenylation spec... 592 e-167
ref|XP_006352991.1| PREDICTED: cleavage and polyadenylation spec... 590 e-166
ref|XP_003534764.1| PREDICTED: cleavage and polyadenylation spec... 589 e-165
ref|XP_004233145.1| PREDICTED: cleavage and polyadenylation spec... 585 e-164
ref|XP_004141524.1| PREDICTED: cleavage and polyadenylation spec... 584 e-164
gb|EXB51974.1| Cleavage and polyadenylation specificity factor C... 575 e-161
ref|XP_002893618.1| hypothetical protein ARALYDRAFT_890588 [Arab... 572 e-160
ref|XP_002300333.2| zinc finger family protein [Populus trichoca... 566 e-159
gb|EMJ15374.1| hypothetical protein PRUPE_ppa019072mg [Prunus pe... 566 e-159
ref|NP_174334.2| cleavage and polyadenylation specificity factor... 566 e-159
>gb|EOX96971.1| Cleavage and polyadenylation specificity factor 30 [Theobroma cacao]
Length = 698
Score = 616 bits (1589), Expect = e-174
Identities = 308/442 (69%), Positives = 337/442 (76%), Gaps = 3/442 (0%)
Frame = +2
Query: 50 MDDGEGGLSFDFEGGLDTGPIHPTASVPVIQSSADGNISSAATANVYNPSAAPLPATQ-A 226
MDD EGGLSFDFEGGLD GP PTAS+PV+ S ++ + N P AAP A
Sbjct: 1 MDDSEGGLSFDFEGGLDAGPAAPTASMPVVNSDPSAAANNNSNNNSAVPGAAPTSTNDPA 60
Query: 227 ADXXXXXXXRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDC 406
A RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRL+GECREQDC
Sbjct: 61 AAVGGGGAGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDC 120
Query: 407 VYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYNHGXXXX 586
VYKHTNEDIKECNMYKLGFCPNG DCRYRHAKLPGPPPPVEE+LQKIQQL+SYN+
Sbjct: 121 VYKHTNEDIKECNMYKLGFCPNGADCRYRHAKLPGPPPPVEEVLQKIQQLSSYNYNKFFQ 180
Query: 587 XXXXXXXXXXXTEKPQFPQGPNGTNQV--GKTSMTESGNVLXXXXXXXXXXXXXXXXXXI 760
TEK Q PQG N NQ GK S TES N+ I
Sbjct: 181 QRNSGFAQQ--TEKSQIPQGQNNVNQGAGGKPSTTESANM--HPQQQVQQPQQQVSQTQI 236
Query: 761 PNLLNSQQNQASRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNEAFE 940
N+ N Q NQA++TA PLPQG SRYF+VKSCN ENLELSVQQGVWATQRSNEAKLNEAF+
Sbjct: 237 QNVPNGQSNQANKTAIPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD 296
Query: 941 SVDNVILIFSVNKTRHFQGCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWLKLGELS 1120
S +NVILIFSVN+TRHFQGCAKMTS+IGG V GGNWK+A+GTAHYGRNF+VKWLKL ELS
Sbjct: 297 SAENVILIFSVNRTRHFQGCAKMTSKIGGSVAGGNWKYAHGTAHYGRNFSVKWLKLCELS 356
Query: 1121 FNKTRHLRNPFNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXXXXXXXX 1300
F+KTRHLRNP+NENLPVKISRDCQELEPS+GEQLASLLYLEPDS+LMA+S+
Sbjct: 357 FHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAISVAAELKREEE 416
Query: 1301 XXXGVSLENASENPDIVPFEDN 1366
GV+ +N ENPDIVPFEDN
Sbjct: 417 KAKGVNSDNGGENPDIVPFEDN 438
>gb|EPS64393.1| hypothetical protein M569_10389, partial [Genlisea aurea]
Length = 655
Score = 615 bits (1585), Expect = e-173
Identities = 312/440 (70%), Positives = 341/440 (77%), Gaps = 3/440 (0%)
Frame = +2
Query: 56 DGEGGLSFDFEGGLDTGPIHPTASVPVIQSSA-DGNISSAATANVYNPSAAPLPATQAAD 232
D EGGLSFDFEGGLDTGP T S+P Q+SA DG S ++A+ PS AP A QA+D
Sbjct: 2 DDEGGLSFDFEGGLDTGPGQITGSLPTGQASAADGQGHSVSSASNIYPSTAPASAGQASD 61
Query: 233 XXXXXXXRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVY 412
RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVY
Sbjct: 62 GAGGGG-RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVY 120
Query: 413 KHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYNHGXXXXXX 592
KHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEE+LQ++QQL+S N+G
Sbjct: 121 KHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVLQRVQQLSSNNYGNLNKYF 180
Query: 593 XXXXXXXXX-TEKPQFPQGPNGTNQVGKTSMTESGNVLXXXXXXXXXXXXXXXXXXIPNL 769
++K QFPQ NG N + K+ +S + I N
Sbjct: 181 PNRTTAFSHQSDKSQFPQVQNGANHLTKSGTADSASA-HPQSQQAQQPLPQSSQAQIQNA 239
Query: 770 LNSQQNQASRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNEAFESVD 949
+QQ QA+R ATPLPQGTSRYFVVKSCN ENLELSVQQGVWATQRSNEAKLNEAFES++
Sbjct: 240 PINQQTQANRVATPLPQGTSRYFVVKSCNRENLELSVQQGVWATQRSNEAKLNEAFESIE 299
Query: 950 NVILIFSVNKTRHFQGCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWLKLGELSFNK 1129
NVILIFSVNKTRHFQGCAKM SRIGGF+GGGNWKHA GTAHYGRNFAVKWLKL ELSF+K
Sbjct: 300 NVILIFSVNKTRHFQGCAKMASRIGGFIGGGNWKHANGTAHYGRNFAVKWLKLSELSFDK 359
Query: 1130 TRHLRNPFNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXXXXXXXXXXX 1309
TRHLRNP+NENLPVKISRDCQELEPSVGEQLASLLYLEPDSDL AV L
Sbjct: 360 TRHLRNPYNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLTAVLLAAETKREQEKAR 419
Query: 1310 GVSLEN-ASENPDIVPFEDN 1366
GV+++N +E+PDIVPFEDN
Sbjct: 420 GVTVDNGTAEDPDIVPFEDN 439
>ref|XP_006448924.1| hypothetical protein CICLE_v10014454mg [Citrus clementina]
gi|557551535|gb|ESR62164.1| hypothetical protein
CICLE_v10014454mg [Citrus clementina]
Length = 701
Score = 613 bits (1580), Expect = e-173
Identities = 305/442 (69%), Positives = 337/442 (76%), Gaps = 3/442 (0%)
Frame = +2
Query: 50 MDDGEGGLSFDFEGGLDTGPIHPTASVPVIQS-SADGNISSAATANVYNPSAAPLPATQA 226
M+D EGGLSFDFEGGLD GP PTAS P IQS S ++AA AN S++ A
Sbjct: 1 MEDSEGGLSFDFEGGLDAGPGMPTASNPAIQSDSTAAAAAAAANANHAALSSSGAAPDHA 60
Query: 227 ADXXXXXXXRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDC 406
+ RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRL+GECREQDC
Sbjct: 61 SAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDC 120
Query: 407 VYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYNHGXXXX 586
VYKHTNEDIKECNMYKLGFCPNGPDCRYRH KLPGPPP VEE+LQKIQQ++SYNHG
Sbjct: 121 VYKHTNEDIKECNMYKLGFCPNGPDCRYRHVKLPGPPPSVEEVLQKIQQISSYNHGNPNK 180
Query: 587 XXXXXXXXXXXTEKPQFPQGPNGTNQ--VGKTSMTESGNVLXXXXXXXXXXXXXXXXXXI 760
+K QF QGPN NQ GK+S ES NV +
Sbjct: 181 LFQQRGAFSHQIDKSQFSQGPNAVNQGAAGKSSTAESANV-HQQQLVQQPQQQGTQTTQM 239
Query: 761 PNLLNSQQNQASRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNEAFE 940
NL N NQ +R ATPLPQG SRYF+VKSCN ENLELSVQQGVWATQRSNEAKLNEAF+
Sbjct: 240 QNLPNGLPNQTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD 299
Query: 941 SVDNVILIFSVNKTRHFQGCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWLKLGELS 1120
S +NVILIFSVN+TRHFQGCAKMTS+IGG VGGGNWK+A+GTAHYGRNF+VKWLKL ELS
Sbjct: 300 SAENVILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELS 359
Query: 1121 FNKTRHLRNPFNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXXXXXXXX 1300
F+KTRHLRNP+NENLPVKISRDCQELEPS+GEQLA+LLYLEPDS+LMA+S+
Sbjct: 360 FHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEE 419
Query: 1301 XXXGVSLENASENPDIVPFEDN 1366
GV+ +N +NPDIVPFEDN
Sbjct: 420 KAKGVNPDNGGDNPDIVPFEDN 441
>ref|XP_006468290.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Citrus sinensis]
Length = 683
Score = 607 bits (1565), Expect = e-171
Identities = 302/441 (68%), Positives = 332/441 (75%), Gaps = 2/441 (0%)
Frame = +2
Query: 50 MDDGEGGLSFDFEGGLDTGPIHPTASVPVIQSSADGNISSAATANVYNPSAAPLPATQAA 229
M+D EGGLSFDFEGGLD GP PTAS P S+ G A+A V + S
Sbjct: 1 MEDSEGGLSFDFEGGLDAGPGMPTASNPAAAPSSSGAAPDHASAPVPHHSG--------- 51
Query: 230 DXXXXXXXRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCV 409
RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRL+GECREQDCV
Sbjct: 52 --------RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 103
Query: 410 YKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYNHGXXXXX 589
YKHTNEDIKECNMYKLGFCPNGPDCRYRH KLPGPPP VEE+LQKIQQ++SYNHG
Sbjct: 104 YKHTNEDIKECNMYKLGFCPNGPDCRYRHVKLPGPPPSVEEVLQKIQQISSYNHGNPNKH 163
Query: 590 XXXXXXXXXXTEKPQFPQGPNGTNQ--VGKTSMTESGNVLXXXXXXXXXXXXXXXXXXIP 763
T+K QF QGPN NQ GK+S ES NV +
Sbjct: 164 FQQRGAFSHQTDKSQFSQGPNAVNQGAAGKSSTAESANV-HQQQLVQQPQQQGTQTTQMQ 222
Query: 764 NLLNSQQNQASRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNEAFES 943
NL N NQ +R ATPLPQG SRYF+VKSCN ENLELSVQQGVWATQRSNEAKLNEAF+S
Sbjct: 223 NLPNGLPNQTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDS 282
Query: 944 VDNVILIFSVNKTRHFQGCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWLKLGELSF 1123
+NVILIFSVN+TRHFQGCAKMTS+IGG VGGGNWK+A+GTAHYGRNF+VKWLKL ELSF
Sbjct: 283 AENVILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSF 342
Query: 1124 NKTRHLRNPFNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXXXXXXXXX 1303
+KTRHLRNP+NENLPVKISRDCQELEPS+GEQLA+LLYLEPDS+LMA+S+
Sbjct: 343 HKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEK 402
Query: 1304 XXGVSLENASENPDIVPFEDN 1366
GV+ +N +NPDIVPFEDN
Sbjct: 403 AKGVNPDNGGDNPDIVPFEDN 423
>ref|XP_004231555.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Solanum lycopersicum]
Length = 689
Score = 605 bits (1559), Expect = e-170
Identities = 303/441 (68%), Positives = 335/441 (75%), Gaps = 2/441 (0%)
Frame = +2
Query: 50 MDDGEGGLSFDFEGGLDTGPIHPTASVPVIQSSADGNISSAATANVYNPSAAPLPATQAA 229
MD+GEGGL+FDFEGGLDTGP HPTASVPVIQS D ++A++AN+ P+ +PA
Sbjct: 1 MDEGEGGLNFDFEGGLDTGPTHPTASVPVIQSF-DHTAAAASSANINPPT---VPAVGGQ 56
Query: 230 DXXXXXXXRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCV 409
RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMP+CRFFRLYGECREQDCV
Sbjct: 57 GDVGFVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQDCV 116
Query: 410 YKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYNHG-XXXX 586
YKHT EDIKECNMYKLGFCPNGPDCRYRHAK+PGPPPPVEEILQKIQ L S N+G
Sbjct: 117 YKHTIEDIKECNMYKLGFCPNGPDCRYRHAKMPGPPPPVEEILQKIQHLASNNYGYSNRF 176
Query: 587 XXXXXXXXXXXTEKPQFPQGPNGTNQVGKTSMTESGNVLXXXXXXXXXXXXXXXXXXIPN 766
T+K Q Q NGT+ K++ TE+ +
Sbjct: 177 NQNRNANYSTQTDKSQASQAQNGTSLAVKSTATETPIIQQHQPHQQVQPPQLQGGPTQAQ 236
Query: 767 L-LNSQQNQASRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNEAFES 943
+ N QQNQA RTA LPQGTSRYF+VKSCN ENLELSVQQGVWATQRSNEAKLNEAF+S
Sbjct: 237 IHPNGQQNQADRTAVVLPQGTSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDS 296
Query: 944 VDNVILIFSVNKTRHFQGCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWLKLGELSF 1123
V+NVILIFSVN+TRHFQGC KMTSRIGG GGNWKH +GTAHYGRNF++KWLKL ELSF
Sbjct: 297 VENVILIFSVNRTRHFQGCGKMTSRIGGAANGGNWKHEHGTAHYGRNFSLKWLKLCELSF 356
Query: 1124 NKTRHLRNPFNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXXXXXXXXX 1303
KT HLRNP+NENLPVKISRDCQELEPSVGEQLASLLYLEPDS+LMA+SL
Sbjct: 357 QKTHHLRNPYNENLPVKISRDCQELEPSVGEQLASLLYLEPDSELMAISLAAESKRLEEK 416
Query: 1304 XXGVSLENASENPDIVPFEDN 1366
GV+ +N +NPDIVPFEDN
Sbjct: 417 AKGVNPDNGKDNPDIVPFEDN 437
>ref|XP_002523201.1| conserved hypothetical protein [Ricinus communis]
gi|223537608|gb|EEF39232.1| conserved hypothetical
protein [Ricinus communis]
Length = 702
Score = 603 bits (1556), Expect = e-170
Identities = 305/448 (68%), Positives = 335/448 (74%), Gaps = 9/448 (2%)
Frame = +2
Query: 50 MDDGEGGLSFDFEGGLDT-GPIHPTASVPVIQSSADGNISSAATANVYNPSAAPLPATQA 226
MDD +GGLSFDFEGGLD+ GP +PTAS+P I S +++A ++ ++ PA+ A
Sbjct: 1 MDDTDGGLSFDFEGGLDSSGPTNPTASIPAIPSDNTAAVAAATNNSIVPNVSSNDPASAA 60
Query: 227 ADXXXXXXXRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDC 406
A RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDC
Sbjct: 61 AAAANNQAGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDC 120
Query: 407 VYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYNHGXXXX 586
VYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEE+LQKIQQL SYN+G
Sbjct: 121 VYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVLQKIQQLNSYNYGSSNK 180
Query: 587 XXXXXXXXXXX-TEKPQFPQGPN--GTNQVGKTSMTESGNVLXXXXXXXXXXXXXXXXXX 757
+K QF QGPN G K TES NV
Sbjct: 181 FFQQRGAGFQQHADKSQFSQGPNNMGQGMAAKPPGTESANVQQPQQQQPQPGQGQQSQQQ 240
Query: 758 IP-----NLLNSQQNQASRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAK 922
NL N Q NQA+RTA PLPQG SRYF+VKSCN ENLELSVQQGVWATQRSNEAK
Sbjct: 241 ATQTPTQNLPNGQPNQANRTAIPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAK 300
Query: 923 LNEAFESVDNVILIFSVNKTRHFQGCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWL 1102
LNEAF+S +NVILIFSVN+TRHFQGCAKMTS+IG VGGGNWK+A+GTAHYGRNF+VKWL
Sbjct: 301 LNEAFDSAENVILIFSVNRTRHFQGCAKMTSKIGASVGGGNWKYAHGTAHYGRNFSVKWL 360
Query: 1103 KLGELSFNKTRHLRNPFNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXX 1282
KL ELSF+KTRHLRNP+NENLPVKISRDCQELEPSVG QLA LLY EPDS+LMA+SL
Sbjct: 361 KLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSVGGQLACLLYDEPDSELMAISLAAE 420
Query: 1283 XXXXXXXXXGVSLENASENPDIVPFEDN 1366
GV+ EN +NPDIVPFEDN
Sbjct: 421 AKREEEKAKGVNPENGGDNPDIVPFEDN 448
>ref|XP_006359103.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Solanum tuberosum]
Length = 692
Score = 602 bits (1553), Expect = e-170
Identities = 302/441 (68%), Positives = 334/441 (75%), Gaps = 2/441 (0%)
Frame = +2
Query: 50 MDDGEGGLSFDFEGGLDTGPIHPTASVPVIQSSADGNISSAATANVYNPSAAPLPATQAA 229
MD+GEGGL+FDFEGGLDTGP HPTASVPVIQS D ++A +AN+ P+ + Q+
Sbjct: 1 MDEGEGGLNFDFEGGLDTGPTHPTASVPVIQSF-DHTAAAAPSANINPPTVSAAVGGQS- 58
Query: 230 DXXXXXXXRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCV 409
RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMP+CRFFRLYGECREQDCV
Sbjct: 59 -DVGFVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQDCV 117
Query: 410 YKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYNHG-XXXX 586
YKHT EDIKECNMYKLGFCPNGPDCRYRHAK+PGPPPPVEEILQKIQ L SYN+G
Sbjct: 118 YKHTIEDIKECNMYKLGFCPNGPDCRYRHAKMPGPPPPVEEILQKIQHLASYNYGYSNRF 177
Query: 587 XXXXXXXXXXXTEKPQFPQGPNGTNQVGKTSMTESGNVLXXXXXXXXXXXXXXXXXXIPN 766
++K Q Q NG + K++ TE+ +
Sbjct: 178 NQNRNANYSTQSDKSQASQAQNGMSLAVKSTATETPIIQQHQPNQQVQPPQLQGGPTQAQ 237
Query: 767 L-LNSQQNQASRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNEAFES 943
+ N QQNQA RTA LPQGTSRYF+VKSCN ENLELSVQQGVWATQRSNEAKLNEAF+S
Sbjct: 238 IHPNGQQNQADRTAVVLPQGTSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDS 297
Query: 944 VDNVILIFSVNKTRHFQGCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWLKLGELSF 1123
V+NVILIFSVN+TRHFQGC KMTSRIGG GGNWKH +GTAHYGRNF+VKWLKL ELSF
Sbjct: 298 VENVILIFSVNRTRHFQGCGKMTSRIGGAANGGNWKHEHGTAHYGRNFSVKWLKLCELSF 357
Query: 1124 NKTRHLRNPFNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXXXXXXXXX 1303
KT HLRNP+NENLPVKISRDCQELEPSVGEQLASLLYLEPDS+LMA+SL
Sbjct: 358 QKTHHLRNPYNENLPVKISRDCQELEPSVGEQLASLLYLEPDSELMAISLAAESKRQEEK 417
Query: 1304 XXGVSLENASENPDIVPFEDN 1366
GV+ +N +NPDIVPFEDN
Sbjct: 418 AKGVNPDNGKDNPDIVPFEDN 438
>ref|XP_003546247.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Glycine max]
Length = 691
Score = 601 bits (1549), Expect = e-169
Identities = 305/445 (68%), Positives = 336/445 (75%), Gaps = 6/445 (1%)
Frame = +2
Query: 50 MDDGEGGLSFDFEGGLDTGPIHPTASVP---VIQSSADGNISSAATANVYNPSAAPLPAT 220
M+D EG LSFDFEGGLD P A+VP ++Q + S+AA+A AAP P+T
Sbjct: 1 MEDSEGVLSFDFEGGLDAAPSSAAAAVPSGPLVQHDS----SAAASAVSNGGHAAPAPST 56
Query: 221 QAADXXXXXXXRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQ 400
A RRSFRQTVCRHWLRSLCMKGDACGFLHQYDK+RMPVCRFFRLYGECREQ
Sbjct: 57 -ADPAGGNVPGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPVCRFFRLYGECREQ 115
Query: 401 DCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYNHGXX 580
DCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAK PGPPPPVEE+LQKIQ L SYN+
Sbjct: 116 DCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKSPGPPPPVEEVLQKIQHLFSYNYNSS 175
Query: 581 XXXXXXXXXXXXX-TEKPQFPQGPNGTNQ--VGKTSMTESGNVLXXXXXXXXXXXXXXXX 751
EKPQ PQG N TNQ GK ESGN
Sbjct: 176 NKFFQQRGASYNQQAEKPQLPQGTNSTNQGVTGKPLPAESGNA--QPQQQVQQSQQQVNQ 233
Query: 752 XXIPNLLNSQQNQASRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNE 931
+ N+ N Q NQA+RTATPLPQG SRYF+VKSCN ENLELSVQQGVWATQRSNE+KLNE
Sbjct: 234 SQMQNVANGQPNQANRTATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNESKLNE 293
Query: 932 AFESVDNVILIFSVNKTRHFQGCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWLKLG 1111
AF+SV+NVIL+FSVN+TRHFQGCAKMTSRIGG V GGNWK+A+GTAHYGRNF+VKWLKL
Sbjct: 294 AFDSVENVILVFSVNRTRHFQGCAKMTSRIGGSVAGGNWKYAHGTAHYGRNFSVKWLKLC 353
Query: 1112 ELSFNKTRHLRNPFNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXXXXX 1291
ELSF+KTRHLRNP+NENLPVKISRDCQELEPS+GEQLASLLYLEPDS+LMA+S+
Sbjct: 354 ELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAISVAAESKR 413
Query: 1292 XXXXXXGVSLENASENPDIVPFEDN 1366
GV+ +N ENPDIVPFEDN
Sbjct: 414 EEEKAKGVNPDNGGENPDIVPFEDN 438
>gb|ESW19498.1| hypothetical protein PHAVU_006G130200g [Phaseolus vulgaris]
Length = 697
Score = 595 bits (1535), Expect = e-167
Identities = 304/443 (68%), Positives = 332/443 (74%), Gaps = 4/443 (0%)
Frame = +2
Query: 50 MDDGEGGLSFDFEGGLDTGPIHPTA-SVPVIQSSADGNISSAATANVYNPSAAPLPATQA 226
M+D EG LSFDFEGGLDT P A S P++Q D + +++A +N P+ P A
Sbjct: 1 MEDSEGVLSFDFEGGLDTAPSAAAAPSGPLVQH--DSSAAASAVSNGGPPAPTPSGTEPA 58
Query: 227 ADXXXXXXXRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDC 406
A RRSFRQTVCRHWLRSLCMKGDACGFLHQYDK+RMPVCRFFRLYGECREQDC
Sbjct: 59 A---VNVPGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPVCRFFRLYGECREQDC 115
Query: 407 VYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYNHGXXXX 586
VYKHTNEDIKECNMYKLGFCPNGPDCRYRHAK PGPPPPVEE+LQKIQ L SYN+
Sbjct: 116 VYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKSPGPPPPVEEVLQKIQHLYSYNYNSSNK 175
Query: 587 XXXXXXXXXXX-TEKPQFPQGPNGTNQ--VGKTSMTESGNVLXXXXXXXXXXXXXXXXXX 757
EK Q PQG N TNQ GK ESGN
Sbjct: 176 FFQQRGSSYTQQAEKSQLPQGTNSTNQGVTGKPLPAESGNA-QPQQQVQQSQQQQVSQNQ 234
Query: 758 IPNLLNSQQNQASRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNEAF 937
I N+ N Q NQASR ATPLPQG SRYF+VKSCN ENLELSVQQGVWATQRSNE+KLNEAF
Sbjct: 235 IQNVANGQPNQASRAATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAF 294
Query: 938 ESVDNVILIFSVNKTRHFQGCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWLKLGEL 1117
+SV+NVILIFSVN+TRHFQGCAKMTSRIGG V GGNWK+A+GTAHYGRNF+VKWLKL EL
Sbjct: 295 DSVENVILIFSVNRTRHFQGCAKMTSRIGGSVAGGNWKYAHGTAHYGRNFSVKWLKLCEL 354
Query: 1118 SFNKTRHLRNPFNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXXXXXXX 1297
SF+KTRHLRNP+NENLPVKISRDCQELEPS+GEQLASLLYLEPD +LMAVS+
Sbjct: 355 SFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDGELMAVSVAAESKREE 414
Query: 1298 XXXXGVSLENASENPDIVPFEDN 1366
GV+ +N ENPDIVPFEDN
Sbjct: 415 EKAKGVNPDNGGENPDIVPFEDN 437
>ref|XP_002281594.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Vitis vinifera]
Length = 673
Score = 595 bits (1534), Expect = e-167
Identities = 302/441 (68%), Positives = 334/441 (75%), Gaps = 2/441 (0%)
Frame = +2
Query: 50 MDDGEGGLSFDFEGGLDTGPIHPTASVPVIQSSADGNISSAATANVYNPSAAPLPATQAA 229
M+D EG LSFDFEGGLD P P+IQS D ++AA ++V SA P P
Sbjct: 1 MEDAEGVLSFDFEGGLDAAPGTAATVAPLIQS--DATAAAAAPSSVV--SAEPTPGGAPG 56
Query: 230 DXXXXXXXRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCV 409
RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCV
Sbjct: 57 --------RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCV 108
Query: 410 YKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYNHGXXXXX 589
YKHTNEDIKECNMYKLGFCPNG DCRYRHAKLPGPPP +EE+ QKIQQL+S+N+G
Sbjct: 109 YKHTNEDIKECNMYKLGFCPNGSDCRYRHAKLPGPPPTMEEVFQKIQQLSSFNYGSSNRF 168
Query: 590 XXXXXXXXXXTEKPQFPQGPNGTN--QVGKTSMTESGNVLXXXXXXXXXXXXXXXXXXIP 763
TEK Q QG N N V K+S TE+ NV +P
Sbjct: 169 YQNRNPYNQQTEKSQILQGSNAVNLGTVAKSSTTEAINVQQQQVQPPQQQVSQTPMQNLP 228
Query: 764 NLLNSQQNQASRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNEAFES 943
N L NQA++TA+PLPQG SRYF+VKSCN ENLELSVQQGVWATQRSNEAKLNEAF+S
Sbjct: 229 NGL---PNQANKTASPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDS 285
Query: 944 VDNVILIFSVNKTRHFQGCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWLKLGELSF 1123
V+NVILIFSVN+TRHFQGCAKMTS+IGGFVGGGNWK+A+GTAHYGRNF+VKWLKL ELSF
Sbjct: 286 VENVILIFSVNRTRHFQGCAKMTSKIGGFVGGGNWKYAHGTAHYGRNFSVKWLKLCELSF 345
Query: 1124 NKTRHLRNPFNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXXXXXXXXX 1303
+KTRHLRNP+NENLPVKISRDCQELEPS+GEQLASLLYLEPDS+LMA+SL
Sbjct: 346 HKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAISLAAESKREEEK 405
Query: 1304 XXGVSLENASENPDIVPFEDN 1366
GV+ +N ENPDIVPFEDN
Sbjct: 406 AKGVNPDNGGENPDIVPFEDN 426
>ref|XP_004486563.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Cicer arietinum]
Length = 677
Score = 592 bits (1527), Expect = e-167
Identities = 301/443 (67%), Positives = 330/443 (74%), Gaps = 4/443 (0%)
Frame = +2
Query: 50 MDDGEGGLSFDFEGGLDTGPIHP-TASVPVIQSSADGNISSAATANVYNPSAAPLPATQA 226
M+D EG LSFDFEGGLD P T SVP S + S+ ++ + AAP+
Sbjct: 1 MEDSEGVLSFDFEGGLDAAPPSAATVSVPAPPSGPIVHPDSSLPPSISSNGAAPVSGN-- 58
Query: 227 ADXXXXXXXRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDC 406
RRSFRQTVCRHWLRSLCMKG+ACGFLHQYDK+RMPVCRFFRLYGECREQDC
Sbjct: 59 ------IPGRRSFRQTVCRHWLRSLCMKGEACGFLHQYDKARMPVCRFFRLYGECREQDC 112
Query: 407 VYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYN-HGXXX 583
VYKHTNEDIKECNMYKLGFCPNGPDCRYRHAK PGPPPP+EE+LQKIQ L SYN +
Sbjct: 113 VYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKSPGPPPPIEEVLQKIQHLYSYNFNNSHK 172
Query: 584 XXXXXXXXXXXXTEKPQFPQGPNGTNQ--VGKTSMTESGNVLXXXXXXXXXXXXXXXXXX 757
EK QFPQG N NQ GK ESGNV
Sbjct: 173 FIQQRGSSYTQQVEKSQFPQGINSANQGVAGKPLAAESGNV--QQQQQVQQSQQQVSQIQ 230
Query: 758 IPNLLNSQQNQASRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNEAF 937
NL N Q NQA+RTATPLPQG SRYF+VKSCN ENLELSVQQGVWATQRSNE+KLNEAF
Sbjct: 231 TQNLANGQPNQANRTATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAF 290
Query: 938 ESVDNVILIFSVNKTRHFQGCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWLKLGEL 1117
+SV+NVILIFSVN+TRHFQGCAKMTSRIGG V GGNWK+A+GTAHYGRNF+VKWLKL EL
Sbjct: 291 DSVENVILIFSVNRTRHFQGCAKMTSRIGGSVAGGNWKYAHGTAHYGRNFSVKWLKLCEL 350
Query: 1118 SFNKTRHLRNPFNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXXXXXXX 1297
SF+KTRHLRNP+NENLPVKISRDCQELEPS+GEQLASLLYLEPDS+LMA+S+
Sbjct: 351 SFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAISIAAESKREE 410
Query: 1298 XXXXGVSLENASENPDIVPFEDN 1366
GV+ +NA ENPDIVPFEDN
Sbjct: 411 EKAKGVNPDNAGENPDIVPFEDN 433
>ref|XP_006352991.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Solanum tuberosum]
Length = 677
Score = 590 bits (1522), Expect = e-166
Identities = 299/441 (67%), Positives = 327/441 (74%), Gaps = 2/441 (0%)
Frame = +2
Query: 50 MDDGEGGLSFDFEGGLDTGPIHPTASVPVIQSSADGNISSAATANVYNPSAAPLPATQAA 229
MDDGEGGL+FDFEGGLDTGP HPTASVPV+QS+ G+I++ N P
Sbjct: 1 MDDGEGGLNFDFEGGLDTGPTHPTASVPVLQSA--GHITTGPAPNASVALVPPGGGVGQG 58
Query: 230 DXXXXXXXRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCV 409
RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCV
Sbjct: 59 GDGSFVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCV 118
Query: 410 YKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYNHGXXXXX 589
YKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPV E+LQ+IQ LTSY +
Sbjct: 119 YKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVVEVLQRIQNLTSYGYSNRFFQ 178
Query: 590 XXXXXXXXXXTEKPQFPQGPNGTNQVGKTSMTES--GNVLXXXXXXXXXXXXXXXXXXIP 763
+K Q PQ PN NQ K++ E G
Sbjct: 179 NRNTNYSTQ-ADKSQIPQVPNVMNQAVKSTAAEPPIGQPHQPHQQQVQQPQHQGAPTQTQ 237
Query: 764 NLLNSQQNQASRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNEAFES 943
L +SQQNQA A PLPQG SRYF+VKSCN ENLELSVQQGVWATQRSNEAKLNEAF+S
Sbjct: 238 TLPSSQQNQA---AIPLPQGPSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDS 294
Query: 944 VDNVILIFSVNKTRHFQGCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWLKLGELSF 1123
V+NVIL+FS+N+TRHFQG AKMTSRIGG GGNWKH +GTAHYGRNF++KWLKL ELSF
Sbjct: 295 VENVILVFSINRTRHFQGLAKMTSRIGGAAKGGNWKHEHGTAHYGRNFSLKWLKLCELSF 354
Query: 1124 NKTRHLRNPFNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXXXXXXXXX 1303
KTRHLRNP+NENLPVKISRDCQELE SVGEQLASLLY+EPDS+LMAVSL
Sbjct: 355 QKTRHLRNPYNENLPVKISRDCQELEISVGEQLASLLYVEPDSELMAVSLAAESKREEER 414
Query: 1304 XXGVSLENASENPDIVPFEDN 1366
GV+ +N +ENPDIVPFEDN
Sbjct: 415 AKGVNPDNGNENPDIVPFEDN 435
>ref|XP_003534764.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Glycine max]
Length = 681
Score = 589 bits (1518), Expect = e-165
Identities = 300/444 (67%), Positives = 329/444 (74%), Gaps = 5/444 (1%)
Frame = +2
Query: 50 MDDGEGGLSFDFEGGLDTGPIHPTA--SVPVIQSSADGNISSAATANVYNPSAAPLPATQ 223
M+D EG LSFDFEGGLD P A S P+I + S+AA+A AAP P+
Sbjct: 1 MEDSEGVLSFDFEGGLDAAPSSAAAAPSGPLIPHDS----SAAASAVSNGGPAAPAPSAV 56
Query: 224 AADXXXXXXXRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQD 403
RRSFRQTVCRHWLRSLCMKGDACGFLHQYDK+RMPVCRFFRLYGECREQD
Sbjct: 57 DPVGGGNVPGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPVCRFFRLYGECREQD 116
Query: 404 CVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYNHGXXX 583
CVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAK PGPPPPVEE+LQKIQ L SYN+
Sbjct: 117 CVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKSPGPPPPVEEVLQKIQHLYSYNYNSSN 176
Query: 584 XXXXXXXXXXXX-TEKPQFPQGPNGTNQ--VGKTSMTESGNVLXXXXXXXXXXXXXXXXX 754
EKP PQG N TNQ G E GN
Sbjct: 177 KFFQQRGASYNQQAEKPLLPQGNNSTNQGVTGNPLPAELGNA--QPQQQVQQSQQQVNQS 234
Query: 755 XIPNLLNSQQNQASRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNEA 934
+ N+ N Q NQA+RTATPLPQG SRYF+VKSCN ENLELSVQQGVWATQRSNE+KLNEA
Sbjct: 235 QMQNVANGQPNQANRTATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEA 294
Query: 935 FESVDNVILIFSVNKTRHFQGCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWLKLGE 1114
F+SV+NVILIFSVN+TRHFQGCAKMTS+IGG V GGNWK+A+GTAHYGRNF+VKWLKL E
Sbjct: 295 FDSVENVILIFSVNRTRHFQGCAKMTSKIGGSVAGGNWKYAHGTAHYGRNFSVKWLKLCE 354
Query: 1115 LSFNKTRHLRNPFNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXXXXXX 1294
LSF+KTRHLRNP+NENLPVKISRDCQELEPS+GEQLASLLYLEPDS+LMA+S+
Sbjct: 355 LSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAISVAAESKRE 414
Query: 1295 XXXXXGVSLENASENPDIVPFEDN 1366
GV+ +N ENPDIVPFEDN
Sbjct: 415 EEKAKGVNPDNGGENPDIVPFEDN 438
>ref|XP_004233145.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Solanum lycopersicum]
Length = 671
Score = 585 bits (1507), Expect = e-164
Identities = 298/441 (67%), Positives = 323/441 (73%), Gaps = 2/441 (0%)
Frame = +2
Query: 50 MDDGEGGLSFDFEGGLDTGPIHPTASVPVIQSSADGNISSAATANVYNPSAAPLPATQAA 229
MDDGEGGL+FDFEGGLDTGP HPTASVPVIQ+ N S A P
Sbjct: 1 MDDGEGGLNFDFEGGLDTGPTHPTASVPVIQAGPAPNASVAVVP--------PGGGVGLG 52
Query: 230 DXXXXXXXRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCV 409
RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCV
Sbjct: 53 GDGSFVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCV 112
Query: 410 YKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYNHGXXXXX 589
YKHTNEDIKECNM+KLGFCPNGPDCRYRHAK+PGPPPPV E+LQKIQ LTS+ +
Sbjct: 113 YKHTNEDIKECNMFKLGFCPNGPDCRYRHAKMPGPPPPVVEVLQKIQNLTSHGYSNRFFQ 172
Query: 590 XXXXXXXXXXTEKPQFPQGPNGTNQVGKTSMTES--GNVLXXXXXXXXXXXXXXXXXXIP 763
+K Q PQ PN NQ K++ TE G
Sbjct: 173 NRNTNYSTQ-ADKSQIPQVPNVMNQAVKSTATEPPIGQPHQPHQQQVQQPQHQGPPTQTQ 231
Query: 764 NLLNSQQNQASRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNEAFES 943
L +QQNQA A PLPQG SRYF+VKSCN ENLELSVQQGVWATQRSNEAKLNEAF+S
Sbjct: 232 TLPGTQQNQA---AIPLPQGPSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDS 288
Query: 944 VDNVILIFSVNKTRHFQGCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWLKLGELSF 1123
V+NVILIFS+N+TRHFQG AKMTSRIGG GGNWKH +GTAHYGRNF+VKWLKL ELSF
Sbjct: 289 VENVILIFSINRTRHFQGLAKMTSRIGGAAKGGNWKHEHGTAHYGRNFSVKWLKLCELSF 348
Query: 1124 NKTRHLRNPFNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXXXXXXXXX 1303
KTRHLRNP+NENLPVKISRDCQELE SVGEQLASLLY+EPDS+LMA+SL
Sbjct: 349 QKTRHLRNPYNENLPVKISRDCQELEISVGEQLASLLYVEPDSELMAISLAAESKREEER 408
Query: 1304 XXGVSLENASENPDIVPFEDN 1366
GV+ +N +ENPDIVPFEDN
Sbjct: 409 AKGVNPDNGNENPDIVPFEDN 429
>ref|XP_004141524.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Cucumis sativus]
Length = 707
Score = 584 bits (1506), Expect = e-164
Identities = 297/445 (66%), Positives = 329/445 (73%), Gaps = 6/445 (1%)
Frame = +2
Query: 50 MDDGEGGLSFDFEGGLDTGPIHP--TASVPVIQSSADGNISSAATANVYNPSAAP-LPAT 220
M+D EG LSFDFEGGLD GP +P T+S+P+I S + +++A +N + + P + A
Sbjct: 1 MEDSEGVLSFDFEGGLDAGPTNPAATSSLPIINSDSSAPPAASAVSNPLSGALGPAVSAE 60
Query: 221 QAADXXXXXXXRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQ 400
RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMP+CRFFRLYGECREQ
Sbjct: 61 PTGAPHGNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQ 120
Query: 401 DCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYNHGXX 580
DCVYKHTNEDIKECNMYK GFCPNGPDCRYRHAKLPGPPPP+EEILQKIQ L SYN+G
Sbjct: 121 DCVYKHTNEDIKECNMYKFGFCPNGPDCRYRHAKLPGPPPPLEEILQKIQHLGSYNYGPS 180
Query: 581 XXXXXXXXXXXXX-TEKPQFPQGPNGTNQ--VGKTSMTESGNVLXXXXXXXXXXXXXXXX 751
EK QFPQ P Q GK S ES NV
Sbjct: 181 NKFFTQRGVGLSQQNEKSQFPQVPALVTQGVTGKPSAAESVNV---QQQQGQQSAPQASQ 237
Query: 752 XXIPNLLNSQQNQASRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNE 931
+ +L N Q NQ +R AT LPQG SRYF+VKSCN ENLELSVQQGVWATQRSNEAKLNE
Sbjct: 238 TPVQSLSNGQPNQLNRNATSLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNE 297
Query: 932 AFESVDNVILIFSVNKTRHFQGCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWLKLG 1111
AF+S DNVILIFSVN+TRHFQGCAKM SRIGG V GGNWK+A+GT HYG+NF++KWLKL
Sbjct: 298 AFDSADNVILIFSVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGTPHYGQNFSLKWLKLC 357
Query: 1112 ELSFNKTRHLRNPFNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXXXXX 1291
ELSF KTRHLRNP+NENLPVKISRDCQELEPSVGEQLASLLYLEPD +LMAVS+
Sbjct: 358 ELSFQKTRHLRNPYNENLPVKISRDCQELEPSVGEQLASLLYLEPDGELMAVSVAAESKR 417
Query: 1292 XXXXXXGVSLENASENPDIVPFEDN 1366
GV+ + SENPDIVPFEDN
Sbjct: 418 EEEKAKGVNPDIGSENPDIVPFEDN 442
>gb|EXB51974.1| Cleavage and polyadenylation specificity factor CPSF30 [Morus
notabilis]
Length = 710
Score = 575 bits (1482), Expect = e-161
Identities = 293/446 (65%), Positives = 324/446 (72%), Gaps = 7/446 (1%)
Frame = +2
Query: 50 MDDGEGGLSFDFEGGLDT--GPIHPTASVPVIQSSADGNISSAATANVY--NPSAAPLPA 217
M+D EG LSFDFEGGLDT G P A+ + ++AA+ N+ N + + P
Sbjct: 1 MEDSEGVLSFDFEGGLDTTAGGCPPNAAAASAALIHPDSSAAAASNNLAASNSAVSADPT 60
Query: 218 TQAADXXXXXXXRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECRE 397
+ RSFRQTVCRHWLRSLCMKG+ACGFLHQYDKSRMPVCRFFRLYGECRE
Sbjct: 61 SGGGGGASNPGRGRSFRQTVCRHWLRSLCMKGEACGFLHQYDKSRMPVCRFFRLYGECRE 120
Query: 398 QDCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYN-HG 574
QDCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPP VEE+LQKIQ L+SYN H
Sbjct: 121 QDCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPSVEEVLQKIQHLSSYNYHS 180
Query: 575 XXXXXXXXXXXXXXXTEKPQFPQGPNGTNQ--VGKTSMTESGNVLXXXXXXXXXXXXXXX 748
EKP P GPN +Q VGK S+ ES NV
Sbjct: 181 NKFFQQRNAGGFAQLGEKPLLPLGPNAVSQGVVGKPSILESANV-QQPQQQVQPSQQPVG 239
Query: 749 XXXIPNLLNSQQNQASRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLN 928
I N+ NQA+RT PLP G SRYF+VKSCN ENLELSVQQGVWATQRSNEAKLN
Sbjct: 240 QNQIQNVFTGLPNQANRTVAPLPPGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLN 299
Query: 929 EAFESVDNVILIFSVNKTRHFQGCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWLKL 1108
EAF+ +NVILIFSVN+TRHFQGCAKM SRIGG + GGNWK+A+GTAHYGRNF+VKWLKL
Sbjct: 300 EAFDCAENVILIFSVNRTRHFQGCAKMISRIGGSISGGNWKYAHGTAHYGRNFSVKWLKL 359
Query: 1109 GELSFNKTRHLRNPFNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXXXX 1288
ELSF+KTRHLRNP+NENLPVKISRDCQELEPS+GEQLASLLYLEPDS+LMA+SL
Sbjct: 360 CELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAISLAAESK 419
Query: 1289 XXXXXXXGVSLENASENPDIVPFEDN 1366
GV +N ENPDIVPFEDN
Sbjct: 420 REEEKAKGVDPDNGGENPDIVPFEDN 445
>ref|XP_002893618.1| hypothetical protein ARALYDRAFT_890588 [Arabidopsis lyrata subsp.
lyrata] gi|297339460|gb|EFH69877.1| hypothetical protein
ARALYDRAFT_890588 [Arabidopsis lyrata subsp. lyrata]
Length = 631
Score = 572 bits (1473), Expect = e-160
Identities = 292/442 (66%), Positives = 329/442 (74%), Gaps = 3/442 (0%)
Frame = +2
Query: 50 MDDGEGGLSFDFEGGLDTGPIHPTASVPVIQSSADGNISSAATANV---YNPSAAPLPAT 220
M+D +G LSFDFEGGLD+GP P+ASVPV A + SS+A NV Y+ S+A +
Sbjct: 1 MEDADG-LSFDFEGGLDSGPAQPSASVPV----APPDNSSSAAVNVAPTYDHSSATVAGA 55
Query: 221 QAADXXXXXXXRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQ 400
RSFRQTVCRHWLR LCMKGDACGFLHQYDK+RMP+CRFFRLYGECREQ
Sbjct: 56 GRG---------RSFRQTVCRHWLRGLCMKGDACGFLHQYDKARMPICRFFRLYGECREQ 106
Query: 401 DCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYNHGXX 580
DCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEE+LQKIQQLTSYN+G
Sbjct: 107 DCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVLQKIQQLTSYNYGPN 166
Query: 581 XXXXXXXXXXXXXTEKPQFPQGPNGTNQVGKTSMTESGNVLXXXXXXXXXXXXXXXXXXI 760
PQ P G + + E+GN+ I
Sbjct: 167 RFYQPRNVA-------PQLQDKPQG-QVLTQGQPQEAGNLQQQQQQQPQQSQHQVSQTQI 218
Query: 761 PNLLNSQQNQASRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNEAFE 940
PN +Q +RT+ PLPQG +RYFVVKSCN EN ELSVQQGVWATQRSNE+KLNEAF+
Sbjct: 219 PN----PADQTNRTSHPLPQGVNRYFVVKSCNRENFELSVQQGVWATQRSNESKLNEAFD 274
Query: 941 SVDNVILIFSVNKTRHFQGCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWLKLGELS 1120
SV+NVILIFSVN+TRHFQGCAKMTSRIG ++GGGNWKH +GTA YGRNF+VKWLKL ELS
Sbjct: 275 SVENVILIFSVNRTRHFQGCAKMTSRIGSYIGGGNWKHEHGTAQYGRNFSVKWLKLCELS 334
Query: 1121 FNKTRHLRNPFNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXXXXXXXX 1300
F+KTR+LRNP+NENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMA+S+
Sbjct: 335 FHKTRNLRNPYNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAISIAAEAKREEE 394
Query: 1301 XXXGVSLENASENPDIVPFEDN 1366
GV+ E+ +ENPDIVPFEDN
Sbjct: 395 KAKGVNPESRAENPDIVPFEDN 416
>ref|XP_002300333.2| zinc finger family protein [Populus trichocarpa]
gi|550349048|gb|EEE85138.2| zinc finger family protein
[Populus trichocarpa]
Length = 669
Score = 567 bits (1460), Expect = e-159
Identities = 301/470 (64%), Positives = 327/470 (69%), Gaps = 31/470 (6%)
Frame = +2
Query: 50 MDDGEGGLSFDFEGGLDTGPIHPTASVPVIQSSADGNISSAA------TANVYNPSAAPL 211
M+D EG LSFDFEGGLD+GP +P AS+P I S G ++AA T N N S +
Sbjct: 1 MEDSEGVLSFDFEGGLDSGPANPIASIPAIPSDNYGAATAAAPNTTNTTTNTTNNSNSGA 60
Query: 212 PATQAADXXXXXXXRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGEC 391
QA RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGEC
Sbjct: 61 ADIQAG--------RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGEC 112
Query: 392 REQDCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYNH 571
REQDCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEE++QKIQQL SYN
Sbjct: 113 REQDCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVVQKIQQLNSYN- 171
Query: 572 GXXXXXXXXXXXXXXXTEKPQFPQGPNGTNQ--------VGKTSMTESGNVLXXXXXXXX 727
T F Q G +Q + K S TES NV
Sbjct: 172 --------------GVTSNKNFQQRNAGFSQQIEKSPNTIIKPSGTESANV--------Q 209
Query: 728 XXXXXXXXXXIPNLLNSQQNQA------SRTATPLPQGTSR-----------YFVVKSCN 856
P+L N Q Q +R ATPLPQG S YF+VKSCN
Sbjct: 210 QQQQQQQQTQTPHLTNGQHQQPQQPNPLNRIATPLPQGISSFFSCVSPSQFVYFIVKSCN 269
Query: 857 NENLELSVQQGVWATQRSNEAKLNEAFESVDNVILIFSVNKTRHFQGCAKMTSRIGGFVG 1036
ENLELSVQQGVWATQRSNE KLNEA +S DNVILIFSVN+TRHFQGCAKM S+IG VG
Sbjct: 270 RENLELSVQQGVWATQRSNEIKLNEALDSADNVILIFSVNRTRHFQGCAKMASKIGASVG 329
Query: 1037 GGNWKHAYGTAHYGRNFAVKWLKLGELSFNKTRHLRNPFNENLPVKISRDCQELEPSVGE 1216
GGNWK+A+GTAHYGRNF+VKWLKL ELSF+KTRHLRNPFNENLPVKISRDCQELEPS+GE
Sbjct: 330 GGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPFNENLPVKISRDCQELEPSIGE 389
Query: 1217 QLASLLYLEPDSDLMAVSLXXXXXXXXXXXXGVSLENASENPDIVPFEDN 1366
QLASLLYLEPDS+LMAVSL GV+ ++ ENPDIVPFEDN
Sbjct: 390 QLASLLYLEPDSELMAVSLAAEAKREEEKEKGVNPDSGGENPDIVPFEDN 439
>gb|EMJ15374.1| hypothetical protein PRUPE_ppa019072mg [Prunus persica]
Length = 695
Score = 567 bits (1460), Expect = e-159
Identities = 295/443 (66%), Positives = 323/443 (72%), Gaps = 4/443 (0%)
Frame = +2
Query: 50 MDDGEGGLSFDFEGGLD-TGPIHPTASVPVIQSSADGNISSAATANVYNPSAAPLPATQA 226
M+D +G ++FDFEGGLD T PT P S + AA NP+AA A Q
Sbjct: 1 MEDSDGDINFDFEGGLDATAAAGPTNPGPPSNSLMQSDSGVAAVDT--NPAAA---APQP 55
Query: 227 ADXXXXXXXRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDC 406
RS+RQTVCRHWLRSLCMKG+ACGFLHQYDKSRMPVCRFFRLYGECREQDC
Sbjct: 56 NHPNPNRSGGRSYRQTVCRHWLRSLCMKGEACGFLHQYDKSRMPVCRFFRLYGECREQDC 115
Query: 407 VYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYNHGXXXX 586
VYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEE+LQKIQ L SYN+
Sbjct: 116 VYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVLQKIQHLNSYNYNTSNK 175
Query: 587 XXXXXXXXXXX-TEKPQFPQGPNGTNQ--VGKTSMTESGNVLXXXXXXXXXXXXXXXXXX 757
+K Q QGPN Q VGK S ES NV
Sbjct: 176 FYQQRNAGFPQQADKYQSAQGPNSVYQGVVGKPSTGESANV--HQQQQVQQTQQQVGHTQ 233
Query: 758 IPNLLNSQQNQASRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNEAF 937
NL N NQA+R+A PLPQG SRYF+VKSCN ENLELSVQQGVWATQRSNE+KLNEAF
Sbjct: 234 TQNLPNGLANQANRSA-PLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAF 292
Query: 938 ESVDNVILIFSVNKTRHFQGCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWLKLGEL 1117
+S +NVILIFSVN+TRHFQGCAKM SRIGG V GGNWK+A+G+AHYGRNF+VKWLKL EL
Sbjct: 293 DSAENVILIFSVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGSAHYGRNFSVKWLKLCEL 352
Query: 1118 SFNKTRHLRNPFNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXXXXXXX 1297
SF+KTRHLRNP+NENLPVKISRDCQELEPS+GEQLASLLYLEPDS+LMAVS+
Sbjct: 353 SFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAVSIAAESKREE 412
Query: 1298 XXXXGVSLENASENPDIVPFEDN 1366
GV+ EN ENPDIVPFEDN
Sbjct: 413 EKAKGVNPENGGENPDIVPFEDN 435
>ref|NP_174334.2| cleavage and polyadenylation specificity factor CPSF30 [Arabidopsis
thaliana] gi|229553918|sp|A9LNK9.1|CPSF_ARATH RecName:
Full=Cleavage and polyadenylation specificity factor
CPSF30; AltName: Full=Zinc finger CCCH domain-containing
protein 11; Short=AtC3H11 gi|160338218|gb|ABX26048.1|
cleavage and polyadenylation specificity factor-YT521B
[Arabidopsis thaliana] gi|332193100|gb|AEE31221.1|
cleavage and polyadenylation specificity factor CPSF30
[Arabidopsis thaliana]
Length = 631
Score = 566 bits (1459), Expect = e-159
Identities = 291/441 (65%), Positives = 327/441 (74%), Gaps = 2/441 (0%)
Frame = +2
Query: 50 MDDGEGGLSFDFEGGLDTGPIHPTASVPVIQSSADGNISSAAT--ANVYNPSAAPLPATQ 223
M+D +G LSFDFEGGLD+GP+ TASVPV N SSAA A Y+ S+A +
Sbjct: 1 MEDADG-LSFDFEGGLDSGPVQNTASVPVAPPE---NSSSAAVNVAPTYDHSSATVAGAG 56
Query: 224 AADXXXXXXXRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQD 403
RSFRQTVCRHWLR LCMKGDACGFLHQ+DK+RMP+CRFFRLYGECREQD
Sbjct: 57 RG---------RSFRQTVCRHWLRGLCMKGDACGFLHQFDKARMPICRFFRLYGECREQD 107
Query: 404 CVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQQLTSYNHGXXX 583
CVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEE+LQKIQQLT+YN+G
Sbjct: 108 CVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVLQKIQQLTTYNYGTNR 167
Query: 584 XXXXXXXXXXXXTEKPQFPQGPNGTNQVGKTSMTESGNVLXXXXXXXXXXXXXXXXXXIP 763
PQ P G + + ESGN+ IP
Sbjct: 168 LYQARNVA-------PQLQDRPQGQVPM-QGQPQESGNLQQQQQQQPQQSQHQVSQTLIP 219
Query: 764 NLLNSQQNQASRTATPLPQGTSRYFVVKSCNNENLELSVQQGVWATQRSNEAKLNEAFES 943
N +Q +RT+ PLPQG +RYFVVKS N EN ELSVQQGVWATQRSNEAKLNEAF+S
Sbjct: 220 N----PADQTNRTSHPLPQGVNRYFVVKSNNRENFELSVQQGVWATQRSNEAKLNEAFDS 275
Query: 944 VDNVILIFSVNKTRHFQGCAKMTSRIGGFVGGGNWKHAYGTAHYGRNFAVKWLKLGELSF 1123
V+NVILIFSVN+TRHFQGCAKMTSRIGG++GGGNWKH +GTA YGRNF+VKWLKL ELSF
Sbjct: 276 VENVILIFSVNRTRHFQGCAKMTSRIGGYIGGGNWKHEHGTAQYGRNFSVKWLKLCELSF 335
Query: 1124 NKTRHLRNPFNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAVSLXXXXXXXXXX 1303
+KTR+LRNP+NENLPVKISRDCQELEPSVGEQLASLLYLEPDS+LMA+S+
Sbjct: 336 HKTRNLRNPYNENLPVKISRDCQELEPSVGEQLASLLYLEPDSELMAISIAAEAKREEEK 395
Query: 1304 XXGVSLENASENPDIVPFEDN 1366
GV+ E+ +ENPDIVPFEDN
Sbjct: 396 AKGVNPESRAENPDIVPFEDN 416