BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00025567
         (638 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004237422.1| PREDICTED: DNA-directed RNA polymerase I sub...   204   2e-50
gb|EPS67751.1| hypothetical protein M569_07023 [Genlisea aurea]       196   5e-48
gb|EOY15075.1| TFIIB zinc-binding protein, putative [Theobroma c...   129   6e-28
ref|XP_004501608.1| PREDICTED: DNA-directed RNA polymerase I sub...   128   1e-27
emb|CBI19898.3| unnamed protein product [Vitis vinifera]              128   2e-27
ref|XP_002318989.1| transcription factor S-II domain-containing ...   128   2e-27
ref|XP_003603103.1| DNA-directed RNA polymerase I subunit RPA12 ...   126   6e-27
ref|XP_004512027.1| PREDICTED: DNA-directed RNA polymerase I sub...   125   1e-26
ref|NP_566786.1| TFIIB zinc-binding protein [Arabidopsis thalian...   124   2e-26
ref|XP_002875292.1| transcription factor S-II domain-containing ...   124   3e-26
ref|XP_006292047.1| hypothetical protein CARUB_v10018251mg [Caps...   121   2e-25
ref|XP_006390663.1| hypothetical protein EUTSA_v10019327mg [Eutr...   120   4e-25
ref|XP_006416439.1| hypothetical protein EUTSA_v10009132mg [Eutr...   118   1e-24
ref|NP_001236766.1| uncharacterized protein LOC100527489 [Glycin...   118   1e-24
gb|ESW34724.1| hypothetical protein PHAVU_001G175600g [Phaseolus...   117   4e-24
dbj|BAJ91866.1| predicted protein [Hordeum vulgare subsp. vulgare]    114   2e-23
ref|XP_004288139.1| PREDICTED: DNA-directed RNA polymerase I sub...   114   3e-23
ref|XP_004288138.1| PREDICTED: DNA-directed RNA polymerase I sub...   114   3e-23
ref|XP_004288137.1| PREDICTED: DNA-directed RNA polymerase I sub...   114   3e-23
gb|AAK18841.1|AC082645_11 putative RNA polymerase I subunit [Ory...   113   5e-23

>ref|XP_004237422.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA12-like
           [Solanum lycopersicum] gi|565396690|ref|XP_006363942.1|
           PREDICTED: DNA-directed RNA polymerase I subunit
           RPA12-like isoform X1 [Solanum tuberosum]
           gi|565396692|ref|XP_006363943.1| PREDICTED: DNA-directed
           RNA polymerase I subunit RPA12-like isoform X2 [Solanum
           tuberosum]
          Length = 121

 Score =  204 bits (518), Expect = 2e-50
 Identities = 92/119 (77%), Positives = 107/119 (89%)
 Frame = +1

Query: 115 YSHQRDFMFCEMCGTMLSFHSPKIARCPLCKFQKRLKDIARKEIRYTISAEDMRRELGVS 294
           Y  QRDFMFCEMCGTML+F SPK ARCPLCKF+KR+K+IA  EI+YT+SAE ++RELG+S
Sbjct: 3   YCRQRDFMFCEMCGTMLAFDSPKYARCPLCKFKKRVKEIAGNEIQYTVSAEAIKRELGIS 62

Query: 295 SLDDIEEERELKQMDYNAKCKACQHLGMAYVARQIRSADEGQTIFYTCPMCAYRQTENS 471
           S DD+EEE+ELKQMDYNAKCK CQHLGM+Y+ARQIRSADEGQTIFYTC +C  +QTENS
Sbjct: 63  SFDDLEEEKELKQMDYNAKCKGCQHLGMSYIARQIRSADEGQTIFYTCLVCGNKQTENS 121


>gb|EPS67751.1| hypothetical protein M569_07023 [Genlisea aurea]
          Length = 124

 Score =  196 bits (498), Expect = 5e-48
 Identities = 92/124 (74%), Positives = 108/124 (87%), Gaps = 2/124 (1%)
 Frame = +1

Query: 106 MTDYSHQRDFMFCEMCGTMLSFHSPKIARCPLCKFQKRLKDIARK--EIRYTISAEDMRR 279
           M+ Y   RDFMFC++CGTM+SF+S   A+CP+CK +K  KDI++K  EI Y+I+ E +RR
Sbjct: 1   MSGYRTNRDFMFCDICGTMMSFNSLDYAQCPVCKIRKSFKDISKKNLEICYSITPESLRR 60

Query: 280 ELGVSSLDDIEEERELKQMDYNAKCKACQHLGMAYVARQIRSADEGQTIFYTCPMCAYRQ 459
           ELGVSSLDD+EEERELKQMDYNAKCK CQHLGMAYVARQIRSADEGQTIFYTCP+CA+RQ
Sbjct: 61  ELGVSSLDDVEEERELKQMDYNAKCKGCQHLGMAYVARQIRSADEGQTIFYTCPVCAHRQ 120

Query: 460 TENS 471
           TENS
Sbjct: 121 TENS 124


>gb|EOY15075.1| TFIIB zinc-binding protein, putative [Theobroma cacao]
          Length = 119

 Score =  129 bits (325), Expect = 6e-28
 Identities = 61/118 (51%), Positives = 78/118 (66%)
 Frame = +1

Query: 115 YSHQRDFMFCEMCGTMLSFHSPKIARCPLCKFQKRLKDIARKEIRYTISAEDMRRELGVS 294
           YS  RDFMFC  CG+MLS  SPK A CPLCKF+   K I  +EI YTI+AED+RR+LG+S
Sbjct: 3   YSQARDFMFCSFCGSMLSLVSPKYAECPLCKFKPSAKGILGREIGYTITAEDIRRDLGIS 62

Query: 295 SLDDIEEERELKQMDYNAKCKACQHLGMAYVARQIRSADEGQTIFYTCPMCAYRQTEN 468
            + +  + +E   +     CK C H  + Y  RQ+RSADEGQT+F  CP C ++ TEN
Sbjct: 63  HVSEGMKTKESAAL-IKQTCKKCGHPELEYTTRQMRSADEGQTVFLVCPNCKFKDTEN 119


>ref|XP_004501608.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA12-like isoform
           X1 [Cicer arietinum] gi|502132990|ref|XP_004501609.1|
           PREDICTED: DNA-directed RNA polymerase I subunit
           RPA12-like isoform X2 [Cicer arietinum]
           gi|502132992|ref|XP_004501610.1| PREDICTED: DNA-directed
           RNA polymerase I subunit RPA12-like isoform X3 [Cicer
           arietinum]
          Length = 116

 Score =  128 bits (322), Expect = 1e-27
 Identities = 61/118 (51%), Positives = 81/118 (68%)
 Frame = +1

Query: 115 YSHQRDFMFCEMCGTMLSFHSPKIARCPLCKFQKRLKDIARKEIRYTISAEDMRRELGVS 294
           YS  RDF+FC +CGTML+  S + A+CPLCK +K ++DI  KEI YTISAED+RRELG+ 
Sbjct: 3   YSRGRDFLFCHLCGTMLAVPSTEYAQCPLCKTRKNIRDIKGKEISYTISAEDIRRELGI- 61

Query: 295 SLDDIEEERELKQMDYNAKCKACQHLGMAYVARQIRSADEGQTIFYTCPMCAYRQTEN 468
              D+ EE++++    N  C+ C H    +  RQ+RSADEGQT FYTC  C ++  EN
Sbjct: 62  ---DLIEEQKVQLSKVNKTCEKCGHGEATFYTRQMRSADEGQTTFYTCTRCGHQFQEN 116


>emb|CBI19898.3| unnamed protein product [Vitis vinifera]
          Length = 126

 Score =  128 bits (321), Expect = 2e-27
 Identities = 63/124 (50%), Positives = 83/124 (66%), Gaps = 5/124 (4%)
 Frame = +1

Query: 115 YSHQRDFMFCEMCGTMLSFHSPKIARCPLCKFQKRLKDIARKEIRYTISAEDMRRELGVS 294
           YS QRDFMFC +CGTML   S K A CPLCK ++++KDI+ +EIRYT+SAED+RREL + 
Sbjct: 3   YSRQRDFMFCNLCGTMLCMSSTKYAECPLCKSRRKVKDISGREIRYTVSAEDIRRELNIE 62

Query: 295 ---SLDD-IEEERELKQMDYNAKCKACQH-LGMAYVARQIRSADEGQTIFYTCPMCAYRQ 459
               LD  I EE E +      +C  C+    + Y  RQ+RSADEGQTIFY C  C ++ 
Sbjct: 63  PFVKLDGIITEESEAQNAKTKGRCDRCEEDTWLYYYTRQLRSADEGQTIFYECTKCGHKW 122

Query: 460 TENS 471
           ++N+
Sbjct: 123 SQNT 126


>ref|XP_002318989.1| transcription factor S-II domain-containing family protein [Populus
           trichocarpa] gi|222857365|gb|EEE94912.1| transcription
           factor S-II domain-containing family protein [Populus
           trichocarpa]
          Length = 117

 Score =  128 bits (321), Expect = 2e-27
 Identities = 57/113 (50%), Positives = 79/113 (69%)
 Frame = +1

Query: 130 DFMFCEMCGTMLSFHSPKIARCPLCKFQKRLKDIARKEIRYTISAEDMRRELGVSSLDDI 309
           DFMFC++CGTM+  +S +   CPLCKF+K  KD++ +EI Y +S+EDMRR+LG+S     
Sbjct: 8   DFMFCDLCGTMMFLYSKEHVECPLCKFKKSAKDLSEREISYQVSSEDMRRDLGIS---HF 64

Query: 310 EEERELKQMDYNAKCKACQHLGMAYVARQIRSADEGQTIFYTCPMCAYRQTEN 468
           E + E+K M+ N KC+ C H  + +  RQ+RSADEGQT F+ C  C+Y  TEN
Sbjct: 65  EGKMEVKDMEINKKCEKCGHTKLKFSTRQMRSADEGQTTFFHCANCSYTFTEN 117


>ref|XP_003603103.1| DNA-directed RNA polymerase I subunit RPA12 [Medicago truncatula]
           gi|357470681|ref|XP_003605625.1| DNA-directed RNA
           polymerase I subunit RPA12 [Medicago truncatula]
           gi|355492151|gb|AES73354.1| DNA-directed RNA polymerase
           I subunit RPA12 [Medicago truncatula]
           gi|355506680|gb|AES87822.1| DNA-directed RNA polymerase
           I subunit RPA12 [Medicago truncatula]
          Length = 115

 Score =  126 bits (316), Expect = 6e-27
 Identities = 62/118 (52%), Positives = 79/118 (66%)
 Frame = +1

Query: 115 YSHQRDFMFCEMCGTMLSFHSPKIARCPLCKFQKRLKDIARKEIRYTISAEDMRRELGVS 294
           YS  RDF+FC +CGTML+  S   A CPLCK +  +KDI  KEI YTISAED+RRELG+ 
Sbjct: 2   YSRGRDFLFCHLCGTMLTVPSTDYALCPLCKTKCNIKDIKGKEISYTISAEDIRRELGI- 60

Query: 295 SLDDIEEERELKQMDYNAKCKACQHLGMAYVARQIRSADEGQTIFYTCPMCAYRQTEN 468
              D+ EE++++    N  C+ C H   A+  RQ+RSADEGQT FYTC  C ++  EN
Sbjct: 61  ---DLIEEQKVQLSKVNKTCEKCGHGEAAFYTRQMRSADEGQTTFYTCTRCGHQFQEN 115


>ref|XP_004512027.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA12-like [Cicer
           arietinum]
          Length = 116

 Score =  125 bits (314), Expect = 1e-26
 Identities = 60/118 (50%), Positives = 80/118 (67%)
 Frame = +1

Query: 115 YSHQRDFMFCEMCGTMLSFHSPKIARCPLCKFQKRLKDIARKEIRYTISAEDMRRELGVS 294
           YS  RDF+FC +CGTML+  S + A+CPLCK ++ +K I  KEI YTISAED+RRELG+ 
Sbjct: 3   YSRGRDFLFCNLCGTMLAVPSTEYAQCPLCKTKQNIKHIKGKEISYTISAEDIRRELGI- 61

Query: 295 SLDDIEEERELKQMDYNAKCKACQHLGMAYVARQIRSADEGQTIFYTCPMCAYRQTEN 468
              D+ EE++++    N  C+ C H    +  RQ+RSADEGQT FYTC  C ++  EN
Sbjct: 62  ---DLIEEQKVQLSKVNKTCEKCGHGEATFYTRQMRSADEGQTTFYTCTRCGHQFQEN 116


>ref|NP_566786.1| TFIIB zinc-binding protein [Arabidopsis thaliana]
           gi|9279599|dbj|BAB01057.1| unnamed protein product
           [Arabidopsis thaliana] gi|21536551|gb|AAM60883.1|
           putative RNA polymerase I subunit [Arabidopsis thaliana]
           gi|88011125|gb|ABD38906.1| At3g25940 [Arabidopsis
           thaliana] gi|332643572|gb|AEE77093.1| TFIIB zinc-binding
           protein [Arabidopsis thaliana]
          Length = 119

 Score =  124 bits (311), Expect = 2e-26
 Identities = 61/117 (52%), Positives = 77/117 (65%), Gaps = 1/117 (0%)
 Frame = +1

Query: 118 SHQRDFMFCEMCGTMLSFHSPKIARCPLCKFQKRLKDIARKEIRYTISAEDMRRELGVSS 297
           S + +F+FC +CGTML   S K A CP CK  +  KDI  KEI YT+SAED+RRELG+S 
Sbjct: 4   SRESEFLFCNLCGTMLVLKSTKYAECPHCKTTRNAKDIIDKEIAYTVSAEDIRRELGISL 63

Query: 298 L-DDIEEERELKQMDYNAKCKACQHLGMAYVARQIRSADEGQTIFYTCPMCAYRQTE 465
             +  + E EL ++     C+ CQH  + Y  RQ RSADEGQT +YTCP CA+R TE
Sbjct: 64  FGEKTQAEAELPKI--KKACEKCQHPELVYTTRQTRSADEGQTTYYTCPNCAHRFTE 118


>ref|XP_002875292.1| transcription factor S-II domain-containing protein [Arabidopsis
           lyrata subsp. lyrata] gi|297321130|gb|EFH51551.1|
           transcription factor S-II domain-containing protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 119

 Score =  124 bits (310), Expect = 3e-26
 Identities = 60/117 (51%), Positives = 77/117 (65%), Gaps = 1/117 (0%)
 Frame = +1

Query: 118 SHQRDFMFCEMCGTMLSFHSPKIARCPLCKFQKRLKDIARKEIRYTISAEDMRRELGVSS 297
           S +  F+FC  CGTML   S K A CPLCK  +  K+I  K+I YT++AED+RRELG+S 
Sbjct: 4   SRESGFLFCNWCGTMLVLKSTKYAECPLCKTTRNAKEIINKDIAYTVTAEDIRRELGISL 63

Query: 298 L-DDIEEERELKQMDYNAKCKACQHLGMAYVARQIRSADEGQTIFYTCPMCAYRQTE 465
             +  +EE EL ++     C+ CQH  + Y  RQ RSADEGQT +YTCP CA+R TE
Sbjct: 64  FGEKTQEEAELPKI--KKACEKCQHPELVYTTRQTRSADEGQTTYYTCPNCAHRFTE 118


>ref|XP_006292047.1| hypothetical protein CARUB_v10018251mg [Capsella rubella]
           gi|482560754|gb|EOA24945.1| hypothetical protein
           CARUB_v10018251mg [Capsella rubella]
          Length = 119

 Score =  121 bits (303), Expect = 2e-25
 Identities = 58/116 (50%), Positives = 76/116 (65%)
 Frame = +1

Query: 118 SHQRDFMFCEMCGTMLSFHSPKIARCPLCKFQKRLKDIARKEIRYTISAEDMRRELGVSS 297
           + +  F+FC +CGTML   S K A CPLCK  ++ KDI  K+I Y +SAED+RRELG+S 
Sbjct: 4   AQESGFLFCGLCGTMLILKSRKHAECPLCKTTRKAKDIIDKDIAYKVSAEDIRRELGISL 63

Query: 298 LDDIEEERELKQMDYNAKCKACQHLGMAYVARQIRSADEGQTIFYTCPMCAYRQTE 465
             + ++E E +       C+ CQH  + Y  RQ RSADEGQT +YTCP CA+R TE
Sbjct: 64  FGEKQQEDE-QLPKIKKACEKCQHPELVYTTRQTRSADEGQTTYYTCPNCAHRFTE 118


>ref|XP_006390663.1| hypothetical protein EUTSA_v10019327mg [Eutrema salsugineum]
           gi|557087097|gb|ESQ27949.1| hypothetical protein
           EUTSA_v10019327mg [Eutrema salsugineum]
          Length = 119

 Score =  120 bits (300), Expect = 4e-25
 Identities = 58/117 (49%), Positives = 77/117 (65%), Gaps = 1/117 (0%)
 Frame = +1

Query: 118 SHQRDFMFCEMCGTMLSFHSPKIARCPLCKFQKRLKDIARKEIRYTISAEDMRRELGVSS 297
           S +  F+FC +CGTML   S   A CPLC+  +  K+I  KEI YT+SAED+RRELG+S 
Sbjct: 4   SRESGFLFCNLCGTMLILKSATSAECPLCQTTRNAKEIIGKEIAYTVSAEDIRRELGISL 63

Query: 298 L-DDIEEERELKQMDYNAKCKACQHLGMAYVARQIRSADEGQTIFYTCPMCAYRQTE 465
             +  +E+ EL ++     C+ CQH  + Y  RQ RSADEGQT +YTCP C++R TE
Sbjct: 64  FGEKTQEDAELPKI--KKACEKCQHPELVYTTRQTRSADEGQTTYYTCPNCSHRFTE 118


>ref|XP_006416439.1| hypothetical protein EUTSA_v10009132mg [Eutrema salsugineum]
           gi|312281609|dbj|BAJ33670.1| unnamed protein product
           [Thellungiella halophila] gi|557094210|gb|ESQ34792.1|
           hypothetical protein EUTSA_v10009132mg [Eutrema
           salsugineum]
          Length = 119

 Score =  118 bits (296), Expect = 1e-24
 Identities = 57/117 (48%), Positives = 76/117 (64%), Gaps = 1/117 (0%)
 Frame = +1

Query: 118 SHQRDFMFCEMCGTMLSFHSPKIARCPLCKFQKRLKDIARKEIRYTISAEDMRRELGVSS 297
           S +  F+FC +CGTML   S   A CPLC+  +  K+I  K+I YT+SAED+RRELG+S 
Sbjct: 4   SRESGFLFCNLCGTMLILKSATSAECPLCQTTRNAKEIIGKDIAYTVSAEDIRRELGISL 63

Query: 298 L-DDIEEERELKQMDYNAKCKACQHLGMAYVARQIRSADEGQTIFYTCPMCAYRQTE 465
             +  +E+ EL ++     C+ CQH  + Y  RQ RSADEGQT +YTCP C +R TE
Sbjct: 64  FGEKTQEDAELPKI--KKACEKCQHPELVYTTRQTRSADEGQTTYYTCPNCGHRFTE 118


>ref|NP_001236766.1| uncharacterized protein LOC100527489 [Glycine max]
           gi|255632466|gb|ACU16583.1| unknown [Glycine max]
          Length = 116

 Score =  118 bits (296), Expect = 1e-24
 Identities = 57/117 (48%), Positives = 78/117 (66%)
 Frame = +1

Query: 118 SHQRDFMFCEMCGTMLSFHSPKIARCPLCKFQKRLKDIARKEIRYTISAEDMRRELGVSS 297
           S + DF+FC +CGTML+  S + A+CPLCK ++ ++DI  KEI +TIS ED+RRELG   
Sbjct: 3   SSRLDFLFCNLCGTMLTVPSTEYAQCPLCKTRRDIQDICDKEISFTISDEDIRRELG--- 59

Query: 298 LDDIEEERELKQMDYNAKCKACQHLGMAYVARQIRSADEGQTIFYTCPMCAYRQTEN 468
           ++ IEE   ++    + KC+ C H    Y  RQ+RSADEGQT FYTC  C ++  EN
Sbjct: 60  MEIIEEHAVMEYSKVSKKCEKCGHGEATYYTRQMRSADEGQTTFYTCTGCGHQSQEN 116


>gb|ESW34724.1| hypothetical protein PHAVU_001G175600g [Phaseolus vulgaris]
          Length = 115

 Score =  117 bits (292), Expect = 4e-24
 Identities = 57/117 (48%), Positives = 78/117 (66%)
 Frame = +1

Query: 118 SHQRDFMFCEMCGTMLSFHSPKIARCPLCKFQKRLKDIARKEIRYTISAEDMRRELGVSS 297
           S + DF+FC +CGTML+  + + A CPLCK  + ++DI  KEI YTI AED+RRELG+  
Sbjct: 3   SSRLDFLFCHLCGTMLTVPNSEYAVCPLCKTLRDIQDIRDKEIGYTIYAEDIRRELGI-- 60

Query: 298 LDDIEEERELKQMDYNAKCKACQHLGMAYVARQIRSADEGQTIFYTCPMCAYRQTEN 468
             +I EE++++    N KC+ C H    +  RQ+RSADEGQT FYTC  C ++  EN
Sbjct: 61  --EIIEEQKVQLSKVNKKCEKCGHDEANFYTRQMRSADEGQTTFYTCTRCGHQSQEN 115


>dbj|BAJ91866.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 125

 Score =  114 bits (285), Expect = 2e-23
 Identities = 54/119 (45%), Positives = 74/119 (62%), Gaps = 4/119 (3%)
 Frame = +1

Query: 127 RDFMFCEMCGTMLSFHSPKIARCPLCKFQKRLKDIARKEIRYTISAEDMRRELGVSSLDD 306
           RDF+FC +CGT+L F+S + A CPLC F+++ KDI  KE RY ++AED+RREL +     
Sbjct: 7   RDFLFCGVCGTLLDFNSHRYASCPLCGFKRKAKDIEGKETRYAVTAEDIRRELKIKPFVV 66

Query: 307 IEEEREL----KQMDYNAKCKACQHLGMAYVARQIRSADEGQTIFYTCPMCAYRQTENS 471
           +E    L    ++      C  C H  + Y  +Q+RSADEGQTIFY CP C +   EN+
Sbjct: 67  LESAPNLDIVVQRSLTERACPKCNHHELEYYTKQLRSADEGQTIFYECPECGHAFNENT 125


>ref|XP_004288139.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA12-like isoform
           3 [Fragaria vesca subsp. vesca]
           gi|470103429|ref|XP_004288140.1| PREDICTED: DNA-directed
           RNA polymerase I subunit RPA12-like isoform 4 [Fragaria
           vesca subsp. vesca]
          Length = 121

 Score =  114 bits (284), Expect = 3e-23
 Identities = 58/124 (46%), Positives = 79/124 (63%), Gaps = 3/124 (2%)
 Frame = +1

Query: 106 MTDYSHQRDFMFCEMCGTMLSFHSPKIA---RCPLCKFQKRLKDIARKEIRYTISAEDMR 276
           M    + RDFMFC +CGTMLSF     A   +CP CKF + +K++++ +I YT+S ED++
Sbjct: 1   MASMENSRDFMFCNICGTMLSFTRTLYAEPGQCPKCKFSRPIKELSKYKISYTVSKEDIQ 60

Query: 277 RELGVSSLDDIEEERELKQMDYNAKCKACQHLGMAYVARQIRSADEGQTIFYTCPMCAYR 456
           RELG+S +   EE+ EL + D   KC+ C H    Y +RQ+RSADEG T FYTC  C   
Sbjct: 61  RELGISKIK--EEKTELAKTDMK-KCEKCGHNEHTYFSRQMRSADEGATTFYTCTKCNNS 117

Query: 457 QTEN 468
            +EN
Sbjct: 118 FSEN 121


>ref|XP_004288138.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA12-like isoform
           2 [Fragaria vesca subsp. vesca]
          Length = 127

 Score =  114 bits (284), Expect = 3e-23
 Identities = 58/124 (46%), Positives = 79/124 (63%), Gaps = 3/124 (2%)
 Frame = +1

Query: 106 MTDYSHQRDFMFCEMCGTMLSFHSPKIA---RCPLCKFQKRLKDIARKEIRYTISAEDMR 276
           M    + RDFMFC +CGTMLSF     A   +CP CKF + +K++++ +I YT+S ED++
Sbjct: 7   MASMENSRDFMFCNICGTMLSFTRTLYAEPGQCPKCKFSRPIKELSKYKISYTVSKEDIQ 66

Query: 277 RELGVSSLDDIEEERELKQMDYNAKCKACQHLGMAYVARQIRSADEGQTIFYTCPMCAYR 456
           RELG+S +   EE+ EL + D   KC+ C H    Y +RQ+RSADEG T FYTC  C   
Sbjct: 67  RELGISKIK--EEKTELAKTDMK-KCEKCGHNEHTYFSRQMRSADEGATTFYTCTKCNNS 123

Query: 457 QTEN 468
            +EN
Sbjct: 124 FSEN 127


>ref|XP_004288137.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA12-like isoform
           1 [Fragaria vesca subsp. vesca]
          Length = 129

 Score =  114 bits (284), Expect = 3e-23
 Identities = 58/124 (46%), Positives = 79/124 (63%), Gaps = 3/124 (2%)
 Frame = +1

Query: 106 MTDYSHQRDFMFCEMCGTMLSFHSPKIA---RCPLCKFQKRLKDIARKEIRYTISAEDMR 276
           M    + RDFMFC +CGTMLSF     A   +CP CKF + +K++++ +I YT+S ED++
Sbjct: 9   MASMENSRDFMFCNICGTMLSFTRTLYAEPGQCPKCKFSRPIKELSKYKISYTVSKEDIQ 68

Query: 277 RELGVSSLDDIEEERELKQMDYNAKCKACQHLGMAYVARQIRSADEGQTIFYTCPMCAYR 456
           RELG+S +   EE+ EL + D   KC+ C H    Y +RQ+RSADEG T FYTC  C   
Sbjct: 69  RELGISKIK--EEKTELAKTDMK-KCEKCGHNEHTYFSRQMRSADEGATTFYTCTKCNNS 125

Query: 457 QTEN 468
            +EN
Sbjct: 126 FSEN 129


>gb|AAK18841.1|AC082645_11 putative RNA polymerase I subunit [Oryza sativa Japonica Group]
           gi|108710721|gb|ABF98516.1| Transcription factor S-II
           family protein, expressed [Oryza sativa Japonica Group]
          Length = 126

 Score =  113 bits (282), Expect = 5e-23
 Identities = 53/119 (44%), Positives = 78/119 (65%), Gaps = 5/119 (4%)
 Frame = +1

Query: 127 RDFMFCEMCGTMLSFHSPKIARCPLCKFQKRLKDIARKEIRYTISAEDMRRELGVSSLDD 306
           RDF+FC +CGT+L F S + A CPLC F+++ KDI  KE RYT++AED+RREL +     
Sbjct: 7   RDFLFCGVCGTLLKFDSVRSASCPLCGFKRKAKDIEGKETRYTVTAEDIRRELKLDPYVI 66

Query: 307 I-----EEERELKQMDYNAKCKACQHLGMAYVARQIRSADEGQTIFYTCPMCAYRQTEN 468
           +     EE+  +++   N +C+ C++  + Y  +Q+RSADEGQT+FY C  C +   EN
Sbjct: 67  LETTLKEEDVIVERATVNKECEKCKNPELQYYTKQLRSADEGQTVFYKCANCRHEFNEN 125