BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00025561
         (398 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS62215.1| hypothetical protein M569_12574, partial [Genlise...   112   7e-23
gb|EOY20208.1| Pentatricopeptide repeat superfamily protein, put...   104   1e-20
gb|EOY20207.1| Pentatricopeptide repeat superfamily protein, put...   104   1e-20
ref|XP_006465137.1| PREDICTED: putative pentatricopeptide repeat...   100   2e-19
ref|XP_006365279.1| PREDICTED: putative pentatricopeptide repeat...    98   1e-18
ref|XP_004229567.1| PREDICTED: putative pentatricopeptide repeat...    98   1e-18
ref|XP_002267486.1| PREDICTED: putative pentatricopeptide repeat...    97   2e-18
gb|EMJ18330.1| hypothetical protein PRUPE_ppa015612m2g, partial ...    90   3e-16
ref|XP_004135727.1| PREDICTED: putative pentatricopeptide repeat...    86   7e-15
ref|XP_004158095.1| PREDICTED: putative pentatricopeptide repeat...    85   9e-15
ref|XP_002890190.1| predicted protein [Arabidopsis lyrata subsp....    84   2e-14
ref|XP_006303936.1| hypothetical protein CARUB_v10008619mg [Caps...    81   1e-13
tpg|DAA46501.1| TPA: hypothetical protein ZEAMMB73_380894 [Zea m...    78   1e-12
ref|NP_173127.4| pentatricopeptide repeat-containing protein [Ar...    76   5e-12
ref|XP_006416774.1| hypothetical protein EUTSA_v10007086mg [Eutr...    75   7e-12
ref|XP_004962380.1| PREDICTED: putative pentatricopeptide repeat...    75   9e-12
ref|XP_002464868.1| hypothetical protein SORBIDRAFT_01g027870 [S...    75   1e-11
gb|EEE51466.1| hypothetical protein OsJ_32592 [Oryza sativa Japo...    68   1e-09
gb|AAG46167.1|AC018727_19 unknown protein [Oryza sativa Japonica...    65   7e-09
gb|EAY79643.1| hypothetical protein OsI_34787 [Oryza sativa Indi...    65   7e-09

>gb|EPS62215.1| hypothetical protein M569_12574, partial [Genlisea aurea]
          Length = 450

 Score =  112 bits (279), Expect = 7e-23
 Identities = 50/77 (64%), Positives = 61/77 (79%)
 Frame = +3

Query: 168 LTPQIVLTTLRNCPSDLISLSFFFWCARQPHYFHDKPTFHHMVSVVSNLTHTYGTVKRIV 347
           LT + VLT L  CPSDL +LSFF WCARQPHYFH+KP FHHM +V+S+LT TY +V+ I+
Sbjct: 1   LTHKFVLTALHCCPSDLAALSFFLWCARQPHYFHEKPAFHHMATVISSLTRTYRSVEGII 60

Query: 348 QELETLVCVTKAQALLL 398
           Q LET+ C+ KAQ LLL
Sbjct: 61  QALETVGCIRKAQTLLL 77


>gb|EOY20208.1| Pentatricopeptide repeat superfamily protein, putative isoform 2
           [Theobroma cacao]
          Length = 657

 Score =  104 bits (260), Expect = 1e-20
 Identities = 58/119 (48%), Positives = 77/119 (64%)
 Frame = +3

Query: 42  KSVSFAAVHHLASLINCATDSNPQNPPPFKSFSSQEQPNTNFLTPQIVLTTLRNCPSDLI 221
           K + F  V H +S   C+TD +       +SFS +++  T  +TPQIV +TL NCPS+LI
Sbjct: 20  KVLPFVLVRHFSSPEVCSTDKS-------QSFSWEKRRLT--ITPQIVHSTLVNCPSNLI 70

Query: 222 SLSFFFWCARQPHYFHDKPTFHHMVSVVSNLTHTYGTVKRIVQELETLVCVTKAQALLL 398
           +L FF WCA+QP+YFHD   F  MV+V++ LT  Y TV+ IV ELET+ CV K Q  LL
Sbjct: 71  ALGFFLWCAKQPNYFHDGEAFDCMVNVLTQLTKKYVTVRSIVGELETVGCVIKPQTFLL 129


>gb|EOY20207.1| Pentatricopeptide repeat superfamily protein, putative isoform 1
           [Theobroma cacao]
          Length = 695

 Score =  104 bits (260), Expect = 1e-20
 Identities = 58/119 (48%), Positives = 77/119 (64%)
 Frame = +3

Query: 42  KSVSFAAVHHLASLINCATDSNPQNPPPFKSFSSQEQPNTNFLTPQIVLTTLRNCPSDLI 221
           K + F  V H +S   C+TD +       +SFS +++  T  +TPQIV +TL NCPS+LI
Sbjct: 58  KVLPFVLVRHFSSPEVCSTDKS-------QSFSWEKRRLT--ITPQIVHSTLVNCPSNLI 108

Query: 222 SLSFFFWCARQPHYFHDKPTFHHMVSVVSNLTHTYGTVKRIVQELETLVCVTKAQALLL 398
           +L FF WCA+QP+YFHD   F  MV+V++ LT  Y TV+ IV ELET+ CV K Q  LL
Sbjct: 109 ALGFFLWCAKQPNYFHDGEAFDCMVNVLTQLTKKYVTVRSIVGELETVGCVIKPQTFLL 167


>ref|XP_006465137.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g16830-like isoform X1 [Citrus sinensis]
           gi|568821338|ref|XP_006465138.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At1g16830-like isoform X2 [Citrus sinensis]
           gi|568821340|ref|XP_006465139.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At1g16830-like isoform X3 [Citrus sinensis]
          Length = 645

 Score =  100 bits (249), Expect = 2e-19
 Identities = 56/117 (47%), Positives = 72/117 (61%)
 Frame = +3

Query: 48  VSFAAVHHLASLINCATDSNPQNPPPFKSFSSQEQPNTNFLTPQIVLTTLRNCPSDLISL 227
           +SF ++H ++S   CAT             + Q+ P    L PQIV +TL NCPSDLI+L
Sbjct: 23  ISFKSIHQISSPKVCAT-------------THQDFPI--ILAPQIVHSTLLNCPSDLIAL 67

Query: 228 SFFFWCARQPHYFHDKPTFHHMVSVVSNLTHTYGTVKRIVQELETLVCVTKAQALLL 398
           SFF WCA+Q  YFHD  +F HM+SVV+ LT  + TV+ IV EL  + CV KAQ  LL
Sbjct: 68  SFFIWCAKQRDYFHDVQSFDHMISVVTRLTGRFETVRGIVGELARVGCVIKAQTFLL 124


>ref|XP_006365279.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g16830-like isoform X1 [Solanum tuberosum]
           gi|565399483|ref|XP_006365280.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At1g16830-like isoform X2 [Solanum tuberosum]
          Length = 657

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 58/124 (46%), Positives = 73/124 (58%), Gaps = 6/124 (4%)
 Frame = +3

Query: 42  KSVSFAAVHHLASLINCATDSNPQNPPPFKSFSSQ------EQPNTNFLTPQIVLTTLRN 203
           K  S A+   L S I C  D+      P  SFSS+      E P    LTP+IV TTL N
Sbjct: 18  KMESLASFRSLCSQIQCFADT------PQGSFSSRHYQKFPENPRI-ILTPRIVHTTLSN 70

Query: 204 CPSDLISLSFFFWCARQPHYFHDKPTFHHMVSVVSNLTHTYGTVKRIVQELETLVCVTKA 383
           C SD+++ SFF WCARQP+YFHD+     +VS+VS LT  + TVK I++ LE + CV K 
Sbjct: 71  CRSDILAFSFFLWCARQPNYFHDRGILTLIVSIVSRLTQRFRTVKGIIKGLEEVGCVIKP 130

Query: 384 QALL 395
           Q LL
Sbjct: 131 QTLL 134


>ref|XP_004229567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g16830-like [Solanum lycopersicum]
          Length = 715

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 53/118 (44%), Positives = 69/118 (58%)
 Frame = +3

Query: 42  KSVSFAAVHHLASLINCATDSNPQNPPPFKSFSSQEQPNTNFLTPQIVLTTLRNCPSDLI 221
           K  S A+   L S I C  D+ PQ       +    + +   LTP IV TT+ NC SD++
Sbjct: 18  KMESLASFRSLCSQIQCFADT-PQGSFSCSHYQKIPENSRIILTPTIVHTTISNCHSDIL 76

Query: 222 SLSFFFWCARQPHYFHDKPTFHHMVSVVSNLTHTYGTVKRIVQELETLVCVTKAQALL 395
           + SFF WCARQP+YFHD+ T   +VS+VS L   Y TVK I++ LE + CV K Q LL
Sbjct: 77  AFSFFLWCARQPNYFHDRGTLTLIVSIVSRLMKRYRTVKGIIKGLEEVGCVIKPQTLL 134


>ref|XP_002267486.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g16830 [Vitis vinifera] gi|297735747|emb|CBI18434.3|
           unnamed protein product [Vitis vinifera]
          Length = 659

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 47/100 (47%), Positives = 68/100 (68%), Gaps = 1/100 (1%)
 Frame = +3

Query: 102 SNPQNPP-PFKSFSSQEQPNTNFLTPQIVLTTLRNCPSDLISLSFFFWCARQPHYFHDKP 278
           ++PQNP    ++ +  E+     LT Q++ +TL NCPSDLI+LSFF WCA+QP++FH + 
Sbjct: 31  NHPQNPKFTRENHNFPEKKPGLVLTDQLLESTLLNCPSDLIALSFFLWCAKQPNFFHHRR 90

Query: 279 TFHHMVSVVSNLTHTYGTVKRIVQELETLVCVTKAQALLL 398
            F HMV VV+ LT   GT++ ++ EL ++ CV KAQ  LL
Sbjct: 91  AFDHMVDVVARLTQKSGTIRGVMDELGSIGCVVKAQTFLL 130


>gb|EMJ18330.1| hypothetical protein PRUPE_ppa015612m2g, partial [Prunus persica]
          Length = 261

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 41/77 (53%), Positives = 55/77 (71%)
 Frame = +3

Query: 168 LTPQIVLTTLRNCPSDLISLSFFFWCARQPHYFHDKPTFHHMVSVVSNLTHTYGTVKRIV 347
           LT Q V +TL NCPSDLI+L FF WCA+QP++FH++  F HMV V+  +   Y TVK +V
Sbjct: 35  LTHQNVHSTLLNCPSDLIALRFFLWCAQQPNFFHNRIVFDHMVGVIKRMMERYKTVKSVV 94

Query: 348 QELETLVCVTKAQALLL 398
           +EL ++ CV K+Q  LL
Sbjct: 95  RELASVGCVIKSQTFLL 111


>ref|XP_004135727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g16830-like [Cucumis sativus]
          Length = 665

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 43/77 (55%), Positives = 53/77 (68%)
 Frame = +3

Query: 168 LTPQIVLTTLRNCPSDLISLSFFFWCARQPHYFHDKPTFHHMVSVVSNLTHTYGTVKRIV 347
           LT  +V TTL NC SDLI+LSFF WCA+QP++FH+   F +MV VVS L   Y TV  I+
Sbjct: 60  LTNDLVYTTLLNCSSDLIALSFFMWCAKQPNFFHNPAAFDYMVGVVSRLMKQYETVNGIL 119

Query: 348 QELETLVCVTKAQALLL 398
             LE++  VTKAQ  LL
Sbjct: 120 GGLESVGNVTKAQTFLL 136


>ref|XP_004158095.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g16830-like [Cucumis sativus]
          Length = 525

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 43/77 (55%), Positives = 52/77 (67%)
 Frame = +3

Query: 168 LTPQIVLTTLRNCPSDLISLSFFFWCARQPHYFHDKPTFHHMVSVVSNLTHTYGTVKRIV 347
           LT  +V TTL NC SDLI+LSFF WCA+QP++FH+   F +MV VVS L   Y TV  I+
Sbjct: 60  LTNDLVYTTLLNCSSDLIALSFFMWCAKQPNFFHNPAAFDYMVGVVSRLMKQYETVNGIL 119

Query: 348 QELETLVCVTKAQALLL 398
             LE +  VTKAQ  LL
Sbjct: 120 GGLENVGNVTKAQTFLL 136


>ref|XP_002890190.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297336032|gb|EFH66449.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 741

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 48/118 (40%), Positives = 64/118 (54%)
 Frame = +3

Query: 45  SVSFAAVHHLASLINCATDSNPQNPPPFKSFSSQEQPNTNFLTPQIVLTTLRNCPSDLIS 224
           ++SF++VH   SL N A   +  + P               LT   V + LR  PSDL +
Sbjct: 147 TLSFSSVHGQYSLENTAGPRSIASKP---------------LTHDNVYSCLRESPSDLKT 191

Query: 225 LSFFFWCARQPHYFHDKPTFHHMVSVVSNLTHTYGTVKRIVQELETLVCVTKAQALLL 398
           L+FFFWCARQ +YFHD   F HMV VV  LT  Y ++ RI++EL+   C  K +  LL
Sbjct: 192 LNFFFWCARQNNYFHDDRAFDHMVGVVEKLTREYYSIDRIIEELKVYGCEIKPRVFLL 249


>ref|XP_006303936.1| hypothetical protein CARUB_v10008619mg [Capsella rubella]
           gi|482572647|gb|EOA36834.1| hypothetical protein
           CARUB_v10008619mg [Capsella rubella]
          Length = 607

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 39/77 (50%), Positives = 49/77 (63%)
 Frame = +3

Query: 168 LTPQIVLTTLRNCPSDLISLSFFFWCARQPHYFHDKPTFHHMVSVVSNLTHTYGTVKRIV 347
           LT   V + LR  PSDL +LS+FFWCA+Q +YFHD   F HMVSVV  LT  Y  + RI+
Sbjct: 39  LTHDNVYSCLRESPSDLKTLSYFFWCAKQNNYFHDDRAFDHMVSVVEKLTRRYNNIDRII 98

Query: 348 QELETLVCVTKAQALLL 398
           +EL+   C  K +  LL
Sbjct: 99  EELKLSGCEIKPRVFLL 115


>tpg|DAA46501.1| TPA: hypothetical protein ZEAMMB73_380894 [Zea mays]
          Length = 625

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 38/91 (41%), Positives = 50/91 (54%)
 Frame = +3

Query: 126 FKSFSSQEQPNTNFLTPQIVLTTLRNCPSDLISLSFFFWCARQPHYFHDKPTFHHMVSVV 305
           F +   Q QP     TPQIV   +  CPSD I+LSFF WCAR+P YFH   +F  ++   
Sbjct: 16  FFASKPQPQPPPQLPTPQIVEAAVARCPSDGIALSFFLWCARRPGYFHPPSSFDRLLPAA 75

Query: 306 SNLTHTYGTVKRIVQELETLVCVTKAQALLL 398
           S L    GT  ++++EL+ L    K Q  LL
Sbjct: 76  SRLASRLGTANKLIRELQALGVHVKPQTFLL 106


>ref|NP_173127.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|193806394|sp|Q3EDA9.2|PPR46_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At1g16830 gi|332191383|gb|AEE29504.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 608

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 36/77 (46%), Positives = 48/77 (62%)
 Frame = +3

Query: 168 LTPQIVLTTLRNCPSDLISLSFFFWCARQPHYFHDKPTFHHMVSVVSNLTHTYGTVKRIV 347
           LT   V + LR  P+DL +L+FFFWCA+Q +YFHD   F HMV VV  LT  Y ++ RI+
Sbjct: 37  LTHDNVYSCLRESPADLKTLNFFFWCAKQNNYFHDDRAFDHMVGVVEKLTREYYSIDRII 96

Query: 348 QELETLVCVTKAQALLL 398
           + L+   C  K +  LL
Sbjct: 97  ERLKISGCEIKPRVFLL 113


>ref|XP_006416774.1| hypothetical protein EUTSA_v10007086mg [Eutrema salsugineum]
           gi|557094545|gb|ESQ35127.1| hypothetical protein
           EUTSA_v10007086mg [Eutrema salsugineum]
          Length = 620

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 37/77 (48%), Positives = 46/77 (59%)
 Frame = +3

Query: 168 LTPQIVLTTLRNCPSDLISLSFFFWCARQPHYFHDKPTFHHMVSVVSNLTHTYGTVKRIV 347
           LT   V + LR  PSDL +L+FFFWCARQ +YFHD   F HMV VV  L   Y ++  I+
Sbjct: 53  LTHDDVYSRLRESPSDLKTLNFFFWCARQNNYFHDDRAFEHMVGVVEKLARQYKSIDGII 112

Query: 348 QELETLVCVTKAQALLL 398
           + L    C  K + LLL
Sbjct: 113 EGLRLSGCAIKPRVLLL 129


>ref|XP_004962380.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g16830-like isoform X1 [Setaria italica]
          Length = 631

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 38/100 (38%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
 Frame = +3

Query: 117 PPPFKS------FSSQEQPNTNFLTPQIVLTTLRNCPSDLISLSFFFWCARQPHYFHDKP 278
           PPP  +      F+S+  P      PQIV   +  CPSD ++LSFF WCAR+P YFH   
Sbjct: 10  PPPLPAALAAAFFASKPHPPLPPPAPQIVDAAVSRCPSDALALSFFLWCARRPGYFHPPS 69

Query: 279 TFHHMVSVVSNLTHTYGTVKRIVQELETLVCVTKAQALLL 398
           +F  ++   + L    GT   +++EL+ L C  K Q  LL
Sbjct: 70  SFDRLLPAAARLASRLGTAPALLRELQGLGCPIKPQTFLL 109


>ref|XP_002464868.1| hypothetical protein SORBIDRAFT_01g027870 [Sorghum bicolor]
           gi|241918722|gb|EER91866.1| hypothetical protein
           SORBIDRAFT_01g027870 [Sorghum bicolor]
          Length = 594

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 36/91 (39%), Positives = 48/91 (52%)
 Frame = +3

Query: 126 FKSFSSQEQPNTNFLTPQIVLTTLRNCPSDLISLSFFFWCARQPHYFHDKPTFHHMVSVV 305
           F +   Q QP     TPQIV   +  CPSD ++LSFF WCAR+P YFH   +F  ++   
Sbjct: 20  FFASKPQPQPLPQLPTPQIVEAAVARCPSDGLALSFFLWCARRPGYFHPPSSFDRLLPAA 79

Query: 306 SNLTHTYGTVKRIVQELETLVCVTKAQALLL 398
           S      GT   +++EL+ L    K Q  LL
Sbjct: 80  SRFASRLGTANELIRELQALGVPVKPQTFLL 110


>gb|EEE51466.1| hypothetical protein OsJ_32592 [Oryza sativa Japonica Group]
          Length = 706

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 35/107 (32%), Positives = 52/107 (48%)
 Frame = +3

Query: 78  SLINCATDSNPQNPPPFKSFSSQEQPNTNFLTPQIVLTTLRNCPSDLISLSFFFWCARQP 257
           SL +C   S+P  PPP              L+P++V  T+  CPSD ++++FF WCAR P
Sbjct: 95  SLRHCKPRSHPPPPPPR-------------LSPRLVDATVSRCPSDALAITFFLWCARCP 141

Query: 258 HYFHDKPTFHHMVSVVSNLTHTYGTVKRIVQELETLVCVTKAQALLL 398
            YFH   +F  ++   + L     T   I+ +L  L C  +    LL
Sbjct: 142 AYFHPPSSFDRLLPAAARLASRLRTAPAILHQLRALGCPIRPHTFLL 188


>gb|AAG46167.1|AC018727_19 unknown protein [Oryza sativa Japonica Group]
          Length = 601

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 35/120 (29%), Positives = 55/120 (45%)
 Frame = +3

Query: 39  TKSVSFAAVHHLASLINCATDSNPQNPPPFKSFSSQEQPNTNFLTPQIVLTTLRNCPSDL 218
           T++   +A    A+       S+P  PPP              L+P++V  T+  CPSD 
Sbjct: 7   TRTPRLSAAAAAAAFFTTRPRSHPPPPPPR-------------LSPRLVDATVSRCPSDA 53

Query: 219 ISLSFFFWCARQPHYFHDKPTFHHMVSVVSNLTHTYGTVKRIVQELETLVCVTKAQALLL 398
           ++++FF WCAR P YFH   +F  ++   + L     T   I+ +L  L C  +    LL
Sbjct: 54  LAITFFLWCARCPAYFHPPSSFDRLLPAAARLASRLRTAPAILHQLRALGCPIRPHTFLL 113


>gb|EAY79643.1| hypothetical protein OsI_34787 [Oryza sativa Indica Group]
          Length = 631

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 35/120 (29%), Positives = 55/120 (45%)
 Frame = +3

Query: 39  TKSVSFAAVHHLASLINCATDSNPQNPPPFKSFSSQEQPNTNFLTPQIVLTTLRNCPSDL 218
           T++   +A    A+       S+P  PPP              L+P++V  T+  CPSD 
Sbjct: 7   TRTPRLSAAAAAAAFFTTRPRSHPPPPPPR-------------LSPRLVDATVSRCPSDA 53

Query: 219 ISLSFFFWCARQPHYFHDKPTFHHMVSVVSNLTHTYGTVKRIVQELETLVCVTKAQALLL 398
           ++++FF WCAR P YFH   +F  ++   + L     T   I+ +L  L C  +    LL
Sbjct: 54  LAITFFLWCARCPAYFHPPSSFDRLLPAAARLASRLRTAPAILHQLRALGCPIRPHTFLL 113