BLASTX nr result

ID: Rehmannia23_contig00025261 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00025261
         (332 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006366529.1| PREDICTED: F-box protein At5g07610-like [Sol...    60   3e-07

>ref|XP_006366529.1| PREDICTED: F-box protein At5g07610-like [Solanum tuberosum]
          Length = 403

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 35/82 (42%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
 Frame = +2

Query: 95  EIQNTNPAEIVASIDHXXXXXXXXXXXXXXXRFKSVSKDWLSLLTNPVFCNLHYPNPNPA 274
           +++  + A IV SID                 FK+VSK WLS++TNP F  L + NPNPA
Sbjct: 31  DLEQPSSARIVDSIDDLLIEILLRVPIRSLLCFKTVSKRWLSIITNPQFSILCHLNPNPA 90

Query: 275 VGLFLPSADD---HQLFDYVPF 331
           +GL LPSA     +  FDYV F
Sbjct: 91  IGLLLPSAYSLPINPQFDYVHF 112


Top