BLASTX nr result

ID: Rehmannia23_contig00024800 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00024800
         (308 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004234363.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-l...    93   4e-17
ref|XP_006353353.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-l...    89   5e-16

>ref|XP_004234363.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-like [Solanum
           lycopersicum]
          Length = 239

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 49/90 (54%), Positives = 64/90 (71%)
 Frame = +1

Query: 1   EIAEHFKDIYPEFGDLNVEEVLLMQESAYQYIQINKQNRGTSSGCGETSNSSPVLAHENE 180
           EIAE+ KD +PE GDL+ EEVLL QE+ Y   Q N +N+  SS  G+TS+  P+ A + +
Sbjct: 18  EIAENLKDFFPEDGDLSYEEVLLQQETVYLSFQANGKNKSMSSEYGQTSSGHPLSAQKGD 77

Query: 181 SSHGTSVEHQLALDEAIARALELGDDFNNF 270
           SS   S + QLALDEAIAR+L+LGDDF +F
Sbjct: 78  SSQ--SPDSQLALDEAIARSLQLGDDFEDF 105


>ref|XP_006353353.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-like isoform X1 [Solanum
           tuberosum] gi|565373592|ref|XP_006353354.1| PREDICTED:
           E3 ubiquitin ligase BIG BROTHER-like isoform X2 [Solanum
           tuberosum] gi|565373594|ref|XP_006353355.1| PREDICTED:
           E3 ubiquitin ligase BIG BROTHER-like isoform X3 [Solanum
           tuberosum]
          Length = 239

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 48/90 (53%), Positives = 62/90 (68%)
 Frame = +1

Query: 1   EIAEHFKDIYPEFGDLNVEEVLLMQESAYQYIQINKQNRGTSSGCGETSNSSPVLAHENE 180
           EIAE+ KD +PE  DL+ EEVLL QE+ Y   Q N +N+  SS  G+TSN   + A + +
Sbjct: 18  EIAENLKDFFPEDSDLSYEEVLLQQETVYLSFQANGKNKNMSSEYGQTSNGHQLSAQKGD 77

Query: 181 SSHGTSVEHQLALDEAIARALELGDDFNNF 270
           SS   S E QLALDEAIAR+L+LGDDF ++
Sbjct: 78  SSQ--SPESQLALDEAIARSLQLGDDFEDY 105


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