BLASTX nr result
ID: Rehmannia23_contig00024747
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00024747
(469 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera] 201 6e-50
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera] 198 7e-49
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera] 198 7e-49
gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsi... 198 7e-49
emb|CAN72567.1| hypothetical protein VITISV_044177 [Vitis vinifera] 197 9e-49
emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana] 197 2e-48
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 196 3e-48
emb|CAA31653.1| polyprotein [Arabidopsis thaliana] 191 9e-47
gb|AAD36943.1|AF069441_3 putative polyprotein [Arabidopsis thali... 191 9e-47
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc... 191 1e-46
gb|AAK38381.1|AC079028_5 polyprotein, putative [Arabidopsis thal... 191 1e-46
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 190 1e-46
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 190 1e-46
gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Ar... 190 2e-46
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 190 2e-46
gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsi... 189 3e-46
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group] 187 1e-45
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis] 187 1e-45
gb|AAD23690.1| putative retroelement pol polyprotein [Arabidopsi... 186 3e-45
gb|ABA96191.1| retrotransposon protein, putative, Ty1-copia subc... 186 4e-45
>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
Length = 1208
Score = 201 bits (512), Expect = 6e-50
Identities = 90/140 (64%), Positives = 116/140 (82%)
Frame = -1
Query: 421 LEYLHADVWGPSSEPTQGGNRYFLSIIDDFSRKVWVFLMKNKSDVFEKFKNWKTLIENQT 242
L+Y+H+D+WGPS P+ GG RYFL++IDD+SRKVW++ +KNKS+ F KFK WK L+E QT
Sbjct: 450 LDYIHSDLWGPSRVPSIGGARYFLTLIDDYSRKVWIYFLKNKSETFLKFKEWKILVETQT 509
Query: 241 GKRIRTLRTDNGLEFCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAERMNRTLLERVRSML 62
++++ LRTDNGLEF +N F++LC + GI RH+TV YTPQQNG+AERMNRT+LERVR ML
Sbjct: 510 SRKVKKLRTDNGLEFLSNDFNSLCQKEGIARHRTVRYTPQQNGLAERMNRTILERVRCML 569
Query: 61 ASSGLSKRFWGEAVHTAAYL 2
+SSGLSK FW EA TA +L
Sbjct: 570 SSSGLSKVFWAEAAETAVHL 589
>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
Length = 1562
Score = 198 bits (503), Expect = 7e-49
Identities = 89/141 (63%), Positives = 113/141 (80%)
Frame = -1
Query: 424 VLEYLHADVWGPSSEPTQGGNRYFLSIIDDFSRKVWVFLMKNKSDVFEKFKNWKTLIENQ 245
VLEY+H+D+WGPS + G RY+++ IDDFSRKVWV+ +K K +VF KFK WKT++E +
Sbjct: 590 VLEYIHSDLWGPSPVESHSGCRYYVTFIDDFSRKVWVYFLKAKDEVFGKFKEWKTMVEKR 649
Query: 244 TGKRIRTLRTDNGLEFCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAERMNRTLLERVRSM 65
TGK ++TLRTDNGLEFCN FD C + GI RH+TV +TPQQNGVAERMN+TL++R R M
Sbjct: 650 TGKVVKTLRTDNGLEFCNKDFDEFCRKEGIVRHRTVRHTPQQNGVAERMNQTLVQRARCM 709
Query: 64 LASSGLSKRFWGEAVHTAAYL 2
+GLSK+FW EAV+TAAYL
Sbjct: 710 RIDAGLSKKFWAEAVNTAAYL 730
>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
Length = 1643
Score = 198 bits (503), Expect = 7e-49
Identities = 89/141 (63%), Positives = 113/141 (80%)
Frame = -1
Query: 424 VLEYLHADVWGPSSEPTQGGNRYFLSIIDDFSRKVWVFLMKNKSDVFEKFKNWKTLIENQ 245
VLEY+H+D+WGPS + G RY+++ IDDFSRKVWV+ +K K +VF KFK WKT++E +
Sbjct: 803 VLEYIHSDLWGPSPVESHSGCRYYVTFIDDFSRKVWVYFLKAKDEVFGKFKEWKTMVEKR 862
Query: 244 TGKRIRTLRTDNGLEFCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAERMNRTLLERVRSM 65
TGK ++TLRTDNGLEFCN FD C + GI RH+TV +TPQQNGVAERMN+TL++R R M
Sbjct: 863 TGKVVKTLRTDNGLEFCNKDFDEFCRKEGIVRHRTVRHTPQQNGVAERMNQTLVQRARCM 922
Query: 64 LASSGLSKRFWGEAVHTAAYL 2
+GLSK+FW EAV+TAAYL
Sbjct: 923 RIDAGLSKKFWAEAVNTAAYL 943
>gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1356
Score = 198 bits (503), Expect = 7e-49
Identities = 90/141 (63%), Positives = 107/141 (75%), Gaps = 1/141 (0%)
Frame = -1
Query: 421 LEYLHADVWGPSSEPTQGGN-RYFLSIIDDFSRKVWVFLMKNKSDVFEKFKNWKTLIENQ 245
LEY+H+D+WG P G +YF+SIIDDF+RKVWV+ MK K + FEKF W L+ENQ
Sbjct: 497 LEYIHSDLWGAPFVPLSLGKCQYFMSIIDDFTRKVWVYFMKTKDEAFEKFVEWVNLVENQ 556
Query: 244 TGKRIRTLRTDNGLEFCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAERMNRTLLERVRSM 65
T +R++TLRTDNGLEFCN LFD C GI RH+T YTPQQNGVAERMNRT++E+VRSM
Sbjct: 557 TDRRVKTLRTDNGLEFCNKLFDGFCESIGIHRHRTCAYTPQQNGVAERMNRTIMEKVRSM 616
Query: 64 LASSGLSKRFWGEAVHTAAYL 2
L+ SGL KRFW EA HT L
Sbjct: 617 LSDSGLPKRFWAEATHTTVLL 637
>emb|CAN72567.1| hypothetical protein VITISV_044177 [Vitis vinifera]
Length = 950
Score = 197 bits (502), Expect = 9e-49
Identities = 88/141 (62%), Positives = 113/141 (80%)
Frame = -1
Query: 424 VLEYLHADVWGPSSEPTQGGNRYFLSIIDDFSRKVWVFLMKNKSDVFEKFKNWKTLIENQ 245
+LEY+H+D+WGPS + G RY+++ IDDFSRKVWV+ +K K +VF KFK WKT++E +
Sbjct: 445 ILEYIHSDLWGPSPVESHSGCRYYVTFIDDFSRKVWVYFLKAKDEVFGKFKEWKTMVEKR 504
Query: 244 TGKRIRTLRTDNGLEFCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAERMNRTLLERVRSM 65
TGK ++TLRTDNGLEFCN FD C + GI RH+TV +TPQQNGVAERMN+TL++R R M
Sbjct: 505 TGKVVKTLRTDNGLEFCNKDFDEFCRKEGIVRHRTVRHTPQQNGVAERMNQTLVQRARCM 564
Query: 64 LASSGLSKRFWGEAVHTAAYL 2
+GLSK+FW EAV+TAAYL
Sbjct: 565 RIDAGLSKKFWAEAVNTAAYL 585
>emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana]
Length = 1363
Score = 197 bits (500), Expect = 2e-48
Identities = 87/141 (61%), Positives = 111/141 (78%), Gaps = 1/141 (0%)
Frame = -1
Query: 421 LEYLHADVWGPSSEPTQGGN-RYFLSIIDDFSRKVWVFLMKNKSDVFEKFKNWKTLIENQ 245
LEY+H+D+WG + P GN +YF+S IDD++RKVWV+ +K K + FEKF +W +L+ENQ
Sbjct: 504 LEYVHSDLWGAPTVPMSLGNCQYFISFIDDYTRKVWVYFLKTKDEAFEKFVSWISLVENQ 563
Query: 244 TGKRIRTLRTDNGLEFCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAERMNRTLLERVRSM 65
+G+R++TLRTDNGLEFCN +FD C E G +RH+T YTPQQNGV ERMNRT++E+VRSM
Sbjct: 564 SGERVKTLRTDNGLEFCNRMFDGFCEEKGFQRHRTCAYTPQQNGVVERMNRTIMEKVRSM 623
Query: 64 LASSGLSKRFWGEAVHTAAYL 2
L SGL KRFW EA HTA L
Sbjct: 624 LCDSGLPKRFWAEATHTAVLL 644
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 196 bits (498), Expect = 3e-48
Identities = 89/140 (63%), Positives = 112/140 (80%)
Frame = -1
Query: 421 LEYLHADVWGPSSEPTQGGNRYFLSIIDDFSRKVWVFLMKNKSDVFEKFKNWKTLIENQT 242
L+Y+H+D WGP + GG R+F+SIIDD+SR WV++MK+KS+ F+KFK WK L+ENQT
Sbjct: 470 LDYIHSDCWGPCRVESLGGCRFFVSIIDDYSRMTWVYMMKHKSEAFQKFKEWKILMENQT 529
Query: 241 GKRIRTLRTDNGLEFCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAERMNRTLLERVRSML 62
GK+I+ LRTDNGLEFC + FD C + GI RH+TV TPQQNGVAERMN+TLLER R ML
Sbjct: 530 GKKIKRLRTDNGLEFCWSEFDQFCKDEGIARHRTVRNTPQQNGVAERMNQTLLERARCML 589
Query: 61 ASSGLSKRFWGEAVHTAAYL 2
+++GL +RFW EAV TA YL
Sbjct: 590 SNAGLDRRFWAEAVSTACYL 609
>emb|CAA31653.1| polyprotein [Arabidopsis thaliana]
Length = 1291
Score = 191 bits (485), Expect = 9e-47
Identities = 87/143 (60%), Positives = 110/143 (76%), Gaps = 1/143 (0%)
Frame = -1
Query: 427 DVLEYLHADVWGPSS-EPTQGGNRYFLSIIDDFSRKVWVFLMKNKSDVFEKFKNWKTLIE 251
DVL Y+HAD+WG ++ P+ GN+YFLSIIDD +RKVW++ +++K + F++F WK L+E
Sbjct: 504 DVLRYVHADLWGSTNVTPSLSGNKYFLSIIDDKTRKVWLYFLRSKDETFDRFCEWKELVE 563
Query: 250 NQTGKRIRTLRTDNGLEFCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAERMNRTLLERVR 71
NQ K+++ LRTDNGLEFCN FD C E GI RHKT YTPQQNGVAERMNRT++E+VR
Sbjct: 564 NQQNKKVKCLRTDNGLEFCNLKFDAYCKEHGIERHKTCTYTPQQNGVAERMNRTIMEKVR 623
Query: 70 SMLASSGLSKRFWGEAVHTAAYL 2
ML SGL + FW EA TAAYL
Sbjct: 624 CMLNESGLGEEFWAEAAATAAYL 646
>gb|AAD36943.1|AF069441_3 putative polyprotein [Arabidopsis thaliana]
gi|7267195|emb|CAB77906.1| putative polyprotein
[Arabidopsis thaliana]
Length = 778
Score = 191 bits (485), Expect = 9e-47
Identities = 88/141 (62%), Positives = 108/141 (76%), Gaps = 1/141 (0%)
Frame = -1
Query: 421 LEYLHADVWGPSSEPTQGGN-RYFLSIIDDFSRKVWVFLMKNKSDVFEKFKNWKTLIENQ 245
LEY+H D+WG + P GN +YF+S IDD +RKV V+ +K K + FEKF +W +L+ENQ
Sbjct: 387 LEYVHYDLWGAPTMPMALGNCQYFISFIDDHTRKVCVYFLKTKDEAFEKFVSWISLVENQ 446
Query: 244 TGKRIRTLRTDNGLEFCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAERMNRTLLERVRSM 65
+G R++TLRTDNGLEFCN +FD C E GI+RH+T PYTPQQNGV ERMNRT++ERVRSM
Sbjct: 447 SGNRVKTLRTDNGLEFCNRMFDGFCEERGIQRHRTCPYTPQQNGVVERMNRTIMERVRSM 506
Query: 64 LASSGLSKRFWGEAVHTAAYL 2
L S L KRFW EA HTA L
Sbjct: 507 LCDSRLPKRFWAEATHTAVLL 527
>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1278
Score = 191 bits (484), Expect = 1e-46
Identities = 82/141 (58%), Positives = 110/141 (78%)
Frame = -1
Query: 424 VLEYLHADVWGPSSEPTQGGNRYFLSIIDDFSRKVWVFLMKNKSDVFEKFKNWKTLIENQ 245
+L+Y+HAD+WGPS +P+ GG RY L+IIDD+SRKVW + +K+K D F FK WK +IE Q
Sbjct: 484 ILDYVHADLWGPSRKPSLGGARYMLTIIDDYSRKVWPYFLKHKDDTFAAFKEWKVMIERQ 543
Query: 244 TGKRIRTLRTDNGLEFCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAERMNRTLLERVRSM 65
T K ++ LRTDN EFC++ FD+ C + GI RH T+PYTPQQNGVAERMNRT++ + R M
Sbjct: 544 TEKEVKVLRTDNAGEFCSDAFDDYCRKEGIVRHHTIPYTPQQNGVAERMNRTIISKARCM 603
Query: 64 LASSGLSKRFWGEAVHTAAYL 2
L+++ ++KRFW EA +TA YL
Sbjct: 604 LSNARMNKRFWAEAANTACYL 624
>gb|AAK38381.1|AC079028_5 polyprotein, putative [Arabidopsis thaliana]
Length = 855
Score = 191 bits (484), Expect = 1e-46
Identities = 84/143 (58%), Positives = 110/143 (76%), Gaps = 1/143 (0%)
Frame = -1
Query: 427 DVLEYLHADVWGPSS-EPTQGGNRYFLSIIDDFSRKVWVFLMKNKSDVFEKFKNWKTLIE 251
++L Y+HAD+WG + P+ GN+YFLSIIDD SRKVW++ +++K + F+KF WK L+E
Sbjct: 177 EILSYVHADLWGSQNVTPSMSGNKYFLSIIDDKSRKVWLYFLRSKDETFDKFCEWKELVE 236
Query: 250 NQTGKRIRTLRTDNGLEFCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAERMNRTLLERVR 71
NQT KR++ LRTDNGLEFCN FD+ C ++GI RHKT YTPQQNGVAERMNRT++E+VR
Sbjct: 237 NQTDKRVKCLRTDNGLEFCNIKFDSYCKKYGIERHKTCTYTPQQNGVAERMNRTVMEKVR 296
Query: 70 SMLASSGLSKRFWGEAVHTAAYL 2
+L SGL + FW E TA Y+
Sbjct: 297 CLLNESGLEEEFWAEVATTAVYI 319
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 190 bits (483), Expect = 1e-46
Identities = 86/150 (57%), Positives = 114/150 (76%), Gaps = 2/150 (1%)
Frame = -1
Query: 445 NQSVCTD--VLEYLHADVWGPSSEPTQGGNRYFLSIIDDFSRKVWVFLMKNKSDVFEKFK 272
N SV T L+Y+HAD+WGPS +P+ GG RY L+IIDD+SRKVW + +K+K D F FK
Sbjct: 474 NTSVHTTKGTLDYVHADLWGPSKKPSLGGARYMLTIIDDYSRKVWPYFLKHKDDTFTAFK 533
Query: 271 NWKTLIENQTGKRIRTLRTDNGLEFCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAERMNR 92
NWK +IE QT ++++ LRTDNG EFC++ F++ C + GI RH T+P+TPQQNGVAERMNR
Sbjct: 534 NWKVMIERQTERKVKLLRTDNGGEFCSHAFNDYCRQEGIVRHHTIPHTPQQNGVAERMNR 593
Query: 91 TLLERVRSMLASSGLSKRFWGEAVHTAAYL 2
T++ R R ML+ + ++KRFW EA TA YL
Sbjct: 594 TIISRARCMLSHARMNKRFWAEAASTACYL 623
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 190 bits (483), Expect = 1e-46
Identities = 86/150 (57%), Positives = 114/150 (76%), Gaps = 2/150 (1%)
Frame = -1
Query: 445 NQSVCTD--VLEYLHADVWGPSSEPTQGGNRYFLSIIDDFSRKVWVFLMKNKSDVFEKFK 272
N SV T L+Y+HAD+WGPS +P+ GG RY L+IIDD+SRKVW + +K+K D F FK
Sbjct: 474 NTSVHTTKGTLDYVHADLWGPSKKPSLGGARYMLTIIDDYSRKVWPYFLKHKDDTFTAFK 533
Query: 271 NWKTLIENQTGKRIRTLRTDNGLEFCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAERMNR 92
NWK +IE QT ++++ LRTDNG EFC++ F++ C + GI RH T+P+TPQQNGVAERMNR
Sbjct: 534 NWKVMIERQTERKVKLLRTDNGGEFCSHAFNDYCRQEGIVRHHTIPHTPQQNGVAERMNR 593
Query: 91 TLLERVRSMLASSGLSKRFWGEAVHTAAYL 2
T++ R R ML+ + ++KRFW EA TA YL
Sbjct: 594 TIISRARCMLSHARMNKRFWAEAASTACYL 623
>gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Arabidopsis thaliana]
Length = 1356
Score = 190 bits (482), Expect = 2e-46
Identities = 85/143 (59%), Positives = 111/143 (77%), Gaps = 1/143 (0%)
Frame = -1
Query: 427 DVLEYLHADVWG-PSSEPTQGGNRYFLSIIDDFSRKVWVFLMKNKSDVFEKFKNWKTLIE 251
D L Y+HAD+WG P+ P+ G +YFLSIIDD +RKVW++ +K+K + F+KF WK+L+E
Sbjct: 494 DALSYVHADLWGSPNVTPSISGKQYFLSIIDDKTRKVWLYFLKSKDETFDKFCEWKSLVE 553
Query: 250 NQTGKRIRTLRTDNGLEFCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAERMNRTLLERVR 71
NQ K+++ LRTDNGLEFCN+ FD+ C E GI RH+T YTPQQNGVAERMNRT++E+VR
Sbjct: 554 NQVNKKVKCLRTDNGLEFCNSRFDSYCKEHGIERHRTCTYTPQQNGVAERMNRTIMEKVR 613
Query: 70 SMLASSGLSKRFWGEAVHTAAYL 2
+L SG+ + FW EA TAAYL
Sbjct: 614 CLLNKSGVEEVFWAEAAATAAYL 636
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 190 bits (482), Expect = 2e-46
Identities = 85/150 (56%), Positives = 114/150 (76%), Gaps = 2/150 (1%)
Frame = -1
Query: 445 NQSVCTD--VLEYLHADVWGPSSEPTQGGNRYFLSIIDDFSRKVWVFLMKNKSDVFEKFK 272
N SV T L+Y+HAD+WGPS +P+ GG RY L++IDD+SRKVW + +K+K D F FK
Sbjct: 474 NTSVHTTKGTLDYVHADLWGPSKKPSLGGARYMLTVIDDYSRKVWPYFLKHKDDTFTAFK 533
Query: 271 NWKTLIENQTGKRIRTLRTDNGLEFCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAERMNR 92
NWK +IE QT ++++ LRTDNG EFC++ F++ C + GI RH T+P+TPQQNGVAERMNR
Sbjct: 534 NWKVMIERQTERKVKLLRTDNGGEFCSHAFNDYCRQEGIVRHHTIPHTPQQNGVAERMNR 593
Query: 91 TLLERVRSMLASSGLSKRFWGEAVHTAAYL 2
T++ R R ML+ + ++KRFW EA TA YL
Sbjct: 594 TIISRARCMLSHARMNKRFWAEAASTACYL 623
>gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1335
Score = 189 bits (480), Expect = 3e-46
Identities = 82/154 (53%), Positives = 114/154 (74%), Gaps = 1/154 (0%)
Frame = -1
Query: 460 VSPFPNQSVCTDVLEYLHADVWGPSSEPTQGGN-RYFLSIIDDFSRKVWVFLMKNKSDVF 284
VS P Q V + L Y+H+D+WG P GN +YF+S +DD+SRKVW++ ++ K + F
Sbjct: 460 VSFAPAQHVTKEKLAYVHSDLWGSPHNPASLGNSQYFISFVDDYSRKVWIYFLRKKDEAF 519
Query: 283 EKFKNWKTLIENQTGKRIRTLRTDNGLEFCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAE 104
EKF WK ++ENQ+ ++++ LRTDNGLE+CN+ F+ C E GI RHKT YTPQQNG+AE
Sbjct: 520 EKFVEWKKMVENQSDRKVKKLRTDNGLEYCNHYFEKFCKEEGIVRHKTCAYTPQQNGIAE 579
Query: 103 RMNRTLLERVRSMLASSGLSKRFWGEAVHTAAYL 2
R+NRT++++VRSML+ SG+ K+FW EA TA YL
Sbjct: 580 RLNRTIMDKVRSMLSRSGMEKKFWAEAASTAVYL 613
>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
Length = 1335
Score = 187 bits (475), Expect = 1e-45
Identities = 85/150 (56%), Positives = 113/150 (75%), Gaps = 2/150 (1%)
Frame = -1
Query: 445 NQSVCTD--VLEYLHADVWGPSSEPTQGGNRYFLSIIDDFSRKVWVFLMKNKSDVFEKFK 272
N SV T L+Y+HAD+WGPS +P+ GG RY L+IIDD+SRKVW + +K+K D F FK
Sbjct: 476 NTSVHTTKGTLDYVHADLWGPSKKPSLGGARYMLTIIDDYSRKVWPYFLKHKDDTFTAFK 535
Query: 271 NWKTLIENQTGKRIRTLRTDNGLEFCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAERMNR 92
NWK +IE QT ++++ L TDNG EFC++ F++ C + GI RH T+P+TPQQNGVAERMNR
Sbjct: 536 NWKVMIERQTERKVKLLCTDNGGEFCSHAFNDYCRQEGIVRHHTIPHTPQQNGVAERMNR 595
Query: 91 TLLERVRSMLASSGLSKRFWGEAVHTAAYL 2
T++ R R ML+ + ++KRFW EA TA YL
Sbjct: 596 TIISRARCMLSHARMNKRFWAEAASTACYL 625
>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
Length = 1334
Score = 187 bits (475), Expect = 1e-45
Identities = 81/141 (57%), Positives = 111/141 (78%)
Frame = -1
Query: 424 VLEYLHADVWGPSSEPTQGGNRYFLSIIDDFSRKVWVFLMKNKSDVFEKFKNWKTLIENQ 245
VL+Y H D WGP+ P+ G RYF+S+IDD+SRKVW++++K K EKFK WK+L+ENQ
Sbjct: 481 VLDYAHIDHWGPAQVPSLSGGRYFMSLIDDYSRKVWIYILKIKDQALEKFKVWKSLVENQ 540
Query: 244 TGKRIRTLRTDNGLEFCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAERMNRTLLERVRSM 65
+ +++ LRTDNGLEFC+ +F+ C + GI+RHKTV +TPQQNG+AERMNRTL+++ R M
Sbjct: 541 SDFKLKCLRTDNGLEFCSKVFEEYCQKHGIKRHKTVRFTPQQNGLAERMNRTLVDKTRCM 600
Query: 64 LASSGLSKRFWGEAVHTAAYL 2
L +S L + FW EAV+TA+YL
Sbjct: 601 LINSKLPRSFWAEAVNTASYL 621
>gb|AAD23690.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1333
Score = 186 bits (472), Expect = 3e-45
Identities = 86/141 (60%), Positives = 107/141 (75%), Gaps = 1/141 (0%)
Frame = -1
Query: 421 LEYLHADVWGPSSEPTQGGN-RYFLSIIDDFSRKVWVFLMKNKSDVFEKFKNWKTLIENQ 245
LEY+H+D+WG S P G +YF+S IDD++RKV ++ +K K + F+KF W L+ENQ
Sbjct: 475 LEYVHSDLWGAPSVPFSLGKCQYFISFIDDYTRKVRIYFLKTKDEAFDKFVEWANLVENQ 534
Query: 244 TGKRIRTLRTDNGLEFCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAERMNRTLLERVRSM 65
T KRI+TLRTDNGLEFCN FD C++ GI H+T YTPQQNGVAERMNRTL+E+VRSM
Sbjct: 535 TDKRIKTLRTDNGLEFCNRSFDEFCSQKGILWHRTCAYTPQQNGVAERMNRTLMEKVRSM 594
Query: 64 LASSGLSKRFWGEAVHTAAYL 2
L+ SGL K+FW EA HT A L
Sbjct: 595 LSDSGLPKKFWAEATHTTAIL 615
>gb|ABA96191.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1156
Score = 186 bits (471), Expect = 4e-45
Identities = 80/141 (56%), Positives = 108/141 (76%)
Frame = -1
Query: 424 VLEYLHADVWGPSSEPTQGGNRYFLSIIDDFSRKVWVFLMKNKSDVFEKFKNWKTLIENQ 245
+L+Y+HAD+WGPS +P+ GG Y L+IIDD+SRKVW + +K+K D F FK WK +IE Q
Sbjct: 424 ILDYVHADLWGPSRKPSLGGACYMLTIIDDYSRKVWPYFLKHKDDTFAAFKEWKVMIERQ 483
Query: 244 TGKRIRTLRTDNGLEFCNNLFDNLCAEFGIRRHKTVPYTPQQNGVAERMNRTLLERVRSM 65
T K ++ LRTD+G EFC++ FD+ C + GI RH T+PYTPQQNGVAERMNRT++ R M
Sbjct: 484 TEKEVKVLRTDSGGEFCSDAFDDYCRKEGIVRHHTIPYTPQQNGVAERMNRTIISNTRCM 543
Query: 64 LASSGLSKRFWGEAVHTAAYL 2
L+++ ++KRFW E +TA YL
Sbjct: 544 LSNARMNKRFWAEVANTACYL 564