BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00024746
         (327 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsi...   162   3e-38
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   162   4e-38
emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana]         161   1e-37
gb|AAD36943.1|AF069441_3 putative polyprotein [Arabidopsis thali...   159   4e-37
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]   157   1e-36
gb|AAD17414.1| copia-like retroelement pol polyprotein [Arabidop...   153   2e-35
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]   153   3e-35
emb|CAN72567.1| hypothetical protein VITISV_044177 [Vitis vinifera]   153   3e-35
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]   153   3e-35
gb|AAD23690.1| putative retroelement pol polyprotein [Arabidopsi...   153   3e-35
gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Ar...   150   1e-34
gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsi...   150   2e-34
emb|CAA31653.1| polyprotein [Arabidopsis thaliana]                    149   3e-34
gb|AAK38381.1|AC079028_5 polyprotein, putative [Arabidopsis thal...   149   3e-34
dbj|BAA96887.1| copia-like retroelement pol polyprotein [Arabido...   146   2e-33
emb|CAA20201.1| putative transposable element [Arabidopsis thali...   145   5e-33
gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein ...   144   9e-33
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc...   144   2e-32
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc...   144   2e-32
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc...   144   2e-32

>gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1356

 Score =  162 bits (411), Expect = 3e-38
 Identities = 73/108 (67%), Positives = 83/108 (76%)
 Frame = -2

Query: 326 WVFLMKNKSDVFEKFKNWKILIENQTGKRIKTLRTDNGLEFCNNLFDNLCAEFGIRRHKT 147
           WV+ MK K + FEKF  W  L+ENQT +R+KTLRTDNGLEFCN LFD  C   GI RH+T
Sbjct: 532 WVYFMKTKDEAFEKFVEWVNLVENQTDRRVKTLRTDNGLEFCNKLFDGFCESIGIHRHRT 591

Query: 146 VPYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAVHTAAYLIN 3
             YTPQQNGVAERMNRT++E+VRSML+ SGL KRFW EA HT   LIN
Sbjct: 592 CAYTPQQNGVAERMNRTIMEKVRSMLSDSGLPKRFWAEATHTTVLLIN 639


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
           copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  162 bits (410), Expect = 4e-38
 Identities = 75/108 (69%), Positives = 90/108 (83%)
 Frame = -2

Query: 326 WVFLMKNKSDVFEKFKNWKILIENQTGKRIKTLRTDNGLEFCNNLFDNLCAEFGIRRHKT 147
           WV++MK+KS+ F+KFK WKIL+ENQTGK+IK LRTDNGLEFC + FD  C + GI RH+T
Sbjct: 504 WVYMMKHKSEAFQKFKEWKILMENQTGKKIKRLRTDNGLEFCWSEFDQFCKDEGIARHRT 563

Query: 146 VPYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAVHTAAYLIN 3
           V  TPQQNGVAERMN+TLLER R ML+++GL +RFW EAV TA YLIN
Sbjct: 564 VRNTPQQNGVAERMNQTLLERARCMLSNAGLDRRFWAEAVSTACYLIN 611


>emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana]
          Length = 1363

 Score =  161 bits (407), Expect = 1e-37
 Identities = 71/108 (65%), Positives = 85/108 (78%)
 Frame = -2

Query: 326 WVFLMKNKSDVFEKFKNWKILIENQTGKRIKTLRTDNGLEFCNNLFDNLCAEFGIRRHKT 147
           WV+ +K K + FEKF +W  L+ENQ+G+R+KTLRTDNGLEFCN +FD  C E G +RH+T
Sbjct: 539 WVYFLKTKDEAFEKFVSWISLVENQSGERVKTLRTDNGLEFCNRMFDGFCEEKGFQRHRT 598

Query: 146 VPYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAVHTAAYLIN 3
             YTPQQNGV ERMNRT++E+VRSML  SGL KRFW EA HTA  LIN
Sbjct: 599 CAYTPQQNGVVERMNRTIMEKVRSMLCDSGLPKRFWAEATHTAVLLIN 646


>gb|AAD36943.1|AF069441_3 putative polyprotein [Arabidopsis thaliana]
           gi|7267195|emb|CAB77906.1| putative polyprotein
           [Arabidopsis thaliana]
          Length = 778

 Score =  159 bits (402), Expect = 4e-37
 Identities = 72/107 (67%), Positives = 84/107 (78%)
 Frame = -2

Query: 323 VFLMKNKSDVFEKFKNWKILIENQTGKRIKTLRTDNGLEFCNNLFDNLCAEFGIRRHKTV 144
           V+ +K K + FEKF +W  L+ENQ+G R+KTLRTDNGLEFCN +FD  C E GI+RH+T 
Sbjct: 423 VYFLKTKDEAFEKFVSWISLVENQSGNRVKTLRTDNGLEFCNRMFDGFCEERGIQRHRTC 482

Query: 143 PYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAVHTAAYLIN 3
           PYTPQQNGV ERMNRT++ERVRSML  S L KRFW EA HTA  LIN
Sbjct: 483 PYTPQQNGVVERMNRTIMERVRSMLCDSRLPKRFWAEATHTAVLLIN 529


>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
          Length = 1208

 Score =  157 bits (397), Expect = 1e-36
 Identities = 72/108 (66%), Positives = 89/108 (82%)
 Frame = -2

Query: 326 WVFLMKNKSDVFEKFKNWKILIENQTGKRIKTLRTDNGLEFCNNLFDNLCAEFGIRRHKT 147
           W++ +KNKS+ F KFK WKIL+E QT +++K LRTDNGLEF +N F++LC + GI RH+T
Sbjct: 484 WIYFLKNKSETFLKFKEWKILVETQTSRKVKKLRTDNGLEFLSNDFNSLCQKEGIARHRT 543

Query: 146 VPYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAVHTAAYLIN 3
           V YTPQQNG+AERMNRT+LERVR ML+SSGLSK FW EA  TA +LIN
Sbjct: 544 VRYTPQQNGLAERMNRTILERVRCMLSSSGLSKVFWAEAAETAVHLIN 591


>gb|AAD17414.1| copia-like retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1166

 Score =  153 bits (387), Expect = 2e-35
 Identities = 68/108 (62%), Positives = 85/108 (78%)
 Frame = -2

Query: 326 WVFLMKNKSDVFEKFKNWKILIENQTGKRIKTLRTDNGLEFCNNLFDNLCAEFGIRRHKT 147
           WV+ +K K + + KF+ WK  +ENQTGK+IK LRTDNGLEF N  FDNLC E GI+RH+T
Sbjct: 415 WVYFLKTKDEAYHKFREWKQAVENQTGKKIKYLRTDNGLEFYNTQFDNLCKEDGIKRHRT 474

Query: 146 VPYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAVHTAAYLIN 3
             YTPQQNGV+ERMN+T+++ VRSMLA +G+S+ FW EA  TA YLIN
Sbjct: 475 CTYTPQQNGVSERMNKTIMDIVRSMLAETGMSQEFWAEATSTAVYLIN 522


>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
          Length = 1562

 Score =  153 bits (386), Expect = 3e-35
 Identities = 69/108 (63%), Positives = 86/108 (79%)
 Frame = -2

Query: 326 WVFLMKNKSDVFEKFKNWKILIENQTGKRIKTLRTDNGLEFCNNLFDNLCAEFGIRRHKT 147
           WV+ +K K +VF KFK WK ++E +TGK +KTLRTDNGLEFCN  FD  C + GI RH+T
Sbjct: 625 WVYFLKAKDEVFGKFKEWKTMVEKRTGKVVKTLRTDNGLEFCNKDFDEFCRKEGIVRHRT 684

Query: 146 VPYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAVHTAAYLIN 3
           V +TPQQNGVAERMN+TL++R R M   +GLSK+FW EAV+TAAYL+N
Sbjct: 685 VRHTPQQNGVAERMNQTLVQRARCMRIDAGLSKKFWAEAVNTAAYLVN 732


>emb|CAN72567.1| hypothetical protein VITISV_044177 [Vitis vinifera]
          Length = 950

 Score =  153 bits (386), Expect = 3e-35
 Identities = 69/108 (63%), Positives = 86/108 (79%)
 Frame = -2

Query: 326 WVFLMKNKSDVFEKFKNWKILIENQTGKRIKTLRTDNGLEFCNNLFDNLCAEFGIRRHKT 147
           WV+ +K K +VF KFK WK ++E +TGK +KTLRTDNGLEFCN  FD  C + GI RH+T
Sbjct: 480 WVYFLKAKDEVFGKFKEWKTMVEKRTGKVVKTLRTDNGLEFCNKDFDEFCRKEGIVRHRT 539

Query: 146 VPYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAVHTAAYLIN 3
           V +TPQQNGVAERMN+TL++R R M   +GLSK+FW EAV+TAAYL+N
Sbjct: 540 VRHTPQQNGVAERMNQTLVQRARCMRIDAGLSKKFWAEAVNTAAYLVN 587


>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
          Length = 1643

 Score =  153 bits (386), Expect = 3e-35
 Identities = 69/108 (63%), Positives = 86/108 (79%)
 Frame = -2

Query: 326  WVFLMKNKSDVFEKFKNWKILIENQTGKRIKTLRTDNGLEFCNNLFDNLCAEFGIRRHKT 147
            WV+ +K K +VF KFK WK ++E +TGK +KTLRTDNGLEFCN  FD  C + GI RH+T
Sbjct: 838  WVYFLKAKDEVFGKFKEWKTMVEKRTGKVVKTLRTDNGLEFCNKDFDEFCRKEGIVRHRT 897

Query: 146  VPYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAVHTAAYLIN 3
            V +TPQQNGVAERMN+TL++R R M   +GLSK+FW EAV+TAAYL+N
Sbjct: 898  VRHTPQQNGVAERMNQTLVQRARCMRIDAGLSKKFWAEAVNTAAYLVN 945


>gb|AAD23690.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1333

 Score =  153 bits (386), Expect = 3e-35
 Identities = 70/107 (65%), Positives = 83/107 (77%)
 Frame = -2

Query: 323 VFLMKNKSDVFEKFKNWKILIENQTGKRIKTLRTDNGLEFCNNLFDNLCAEFGIRRHKTV 144
           ++ +K K + F+KF  W  L+ENQT KRIKTLRTDNGLEFCN  FD  C++ GI  H+T 
Sbjct: 511 IYFLKTKDEAFDKFVEWANLVENQTDKRIKTLRTDNGLEFCNRSFDEFCSQKGILWHRTC 570

Query: 143 PYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAVHTAAYLIN 3
            YTPQQNGVAERMNRTL+E+VRSML+ SGL K+FW EA HT A LIN
Sbjct: 571 AYTPQQNGVAERMNRTLMEKVRSMLSDSGLPKKFWAEATHTTAILIN 617


>gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Arabidopsis thaliana]
          Length = 1356

 Score =  150 bits (380), Expect = 1e-34
 Identities = 66/108 (61%), Positives = 84/108 (77%)
 Frame = -2

Query: 326 WVFLMKNKSDVFEKFKNWKILIENQTGKRIKTLRTDNGLEFCNNLFDNLCAEFGIRRHKT 147
           W++ +K+K + F+KF  WK L+ENQ  K++K LRTDNGLEFCN+ FD+ C E GI RH+T
Sbjct: 531 WLYFLKSKDETFDKFCEWKSLVENQVNKKVKCLRTDNGLEFCNSRFDSYCKEHGIERHRT 590

Query: 146 VPYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAVHTAAYLIN 3
             YTPQQNGVAERMNRT++E+VR +L  SG+ + FW EA  TAAYLIN
Sbjct: 591 CTYTPQQNGVAERMNRTIMEKVRCLLNKSGVEEVFWAEAAATAAYLIN 638


>gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1335

 Score =  150 bits (378), Expect = 2e-34
 Identities = 62/108 (57%), Positives = 85/108 (78%)
 Frame = -2

Query: 326 WVFLMKNKSDVFEKFKNWKILIENQTGKRIKTLRTDNGLEFCNNLFDNLCAEFGIRRHKT 147
           W++ ++ K + FEKF  WK ++ENQ+ +++K LRTDNGLE+CN+ F+  C E GI RHKT
Sbjct: 508 WIYFLRKKDEAFEKFVEWKKMVENQSDRKVKKLRTDNGLEYCNHYFEKFCKEEGIVRHKT 567

Query: 146 VPYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAVHTAAYLIN 3
             YTPQQNG+AER+NRT++++VRSML+ SG+ K+FW EA  TA YLIN
Sbjct: 568 CAYTPQQNGIAERLNRTIMDKVRSMLSRSGMEKKFWAEAASTAVYLIN 615


>emb|CAA31653.1| polyprotein [Arabidopsis thaliana]
          Length = 1291

 Score =  149 bits (377), Expect = 3e-34
 Identities = 67/108 (62%), Positives = 82/108 (75%)
 Frame = -2

Query: 326 WVFLMKNKSDVFEKFKNWKILIENQTGKRIKTLRTDNGLEFCNNLFDNLCAEFGIRRHKT 147
           W++ +++K + F++F  WK L+ENQ  K++K LRTDNGLEFCN  FD  C E GI RHKT
Sbjct: 541 WLYFLRSKDETFDRFCEWKELVENQQNKKVKCLRTDNGLEFCNLKFDAYCKEHGIERHKT 600

Query: 146 VPYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAVHTAAYLIN 3
             YTPQQNGVAERMNRT++E+VR ML  SGL + FW EA  TAAYLIN
Sbjct: 601 CTYTPQQNGVAERMNRTIMEKVRCMLNESGLGEEFWAEAAATAAYLIN 648


>gb|AAK38381.1|AC079028_5 polyprotein, putative [Arabidopsis thaliana]
          Length = 855

 Score =  149 bits (377), Expect = 3e-34
 Identities = 65/108 (60%), Positives = 83/108 (76%)
 Frame = -2

Query: 326 WVFLMKNKSDVFEKFKNWKILIENQTGKRIKTLRTDNGLEFCNNLFDNLCAEFGIRRHKT 147
           W++ +++K + F+KF  WK L+ENQT KR+K LRTDNGLEFCN  FD+ C ++GI RHKT
Sbjct: 214 WLYFLRSKDETFDKFCEWKELVENQTDKRVKCLRTDNGLEFCNIKFDSYCKKYGIERHKT 273

Query: 146 VPYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAVHTAAYLIN 3
             YTPQQNGVAERMNRT++E+VR +L  SGL + FW E   TA Y+IN
Sbjct: 274 CTYTPQQNGVAERMNRTVMEKVRCLLNESGLEEEFWAEVATTAVYIIN 321


>dbj|BAA96887.1| copia-like retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1140

 Score =  146 bits (369), Expect = 2e-33
 Identities = 66/108 (61%), Positives = 79/108 (73%)
 Frame = -2

Query: 326 WVFLMKNKSDVFEKFKNWKILIENQTGKRIKTLRTDNGLEFCNNLFDNLCAEFGIRRHKT 147
           W+  +K K + F+KF  WK L+ENQ  K+IK LRTDNGLEFCN  FD  C + GI RH+T
Sbjct: 508 WLMFLKTKDETFDKFCEWKELVENQVNKKIKVLRTDNGLEFCNLKFDEYCKKNGIERHRT 567

Query: 146 VPYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAVHTAAYLIN 3
             YTPQQNGVAERMNRTL+E+VR +L  SGL + FW EA  T AYL+N
Sbjct: 568 CTYTPQQNGVAERMNRTLMEKVRCLLNESGLDESFWAEAASTTAYLVN 615


>emb|CAA20201.1| putative transposable element [Arabidopsis thaliana]
           gi|7268932|emb|CAB79135.1| putative transposable element
           [Arabidopsis thaliana]
          Length = 1308

 Score =  145 bits (366), Expect = 5e-33
 Identities = 65/108 (60%), Positives = 80/108 (74%)
 Frame = -2

Query: 326 WVFLMKNKSDVFEKFKNWKILIENQTGKRIKTLRTDNGLEFCNNLFDNLCAEFGIRRHKT 147
           W+  +K K + FE+F  WK L+ENQ  K++K LRTDNGLEFCN  FD  C + GI RH+T
Sbjct: 522 WLMFLKTKDETFERFCEWKELVENQVNKKVKILRTDNGLEFCNLKFDEFCKQNGIERHRT 581

Query: 146 VPYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAVHTAAYLIN 3
             YTPQQNGVA+RMNRTL+E+VR +L  SGL + FW EA  TAAYL+N
Sbjct: 582 CTYTPQQNGVAKRMNRTLMEKVRCLLNESGLEEVFWAEAAATAAYLVN 629


>gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein [Oryza sativa Japonica Group]
           gi|108708632|gb|ABF96427.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1326

 Score =  144 bits (364), Expect = 9e-33
 Identities = 63/108 (58%), Positives = 82/108 (75%)
 Frame = -2

Query: 326 WVFLMKNKSDVFEKFKNWKILIENQTGKRIKTLRTDNGLEFCNNLFDNLCAEFGIRRHKT 147
           W + +K+K D F  FK WK+ IE QT K +K LRTDNG EFC++ FD+ C + GI RH T
Sbjct: 519 WPYFLKHKDDTFAAFKEWKVRIERQTEKEVKVLRTDNGGEFCSDAFDDYCRKEGIVRHHT 578

Query: 146 VPYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAVHTAAYLIN 3
           +PYTPQQNGVAERMNRT++ + R ML+++ ++KRFW EA +TA YLIN
Sbjct: 579 IPYTPQQNGVAERMNRTIISKARCMLSNARMNKRFWAEAANTACYLIN 626


>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1333

 Score =  144 bits (362), Expect = 2e-32
 Identities = 62/108 (57%), Positives = 83/108 (76%)
 Frame = -2

Query: 326 WVFLMKNKSDVFEKFKNWKILIENQTGKRIKTLRTDNGLEFCNNLFDNLCAEFGIRRHKT 147
           W + +K+K D F  FKNWK++IE QT +++K LRTDNG EFC++ F++ C + GI RH T
Sbjct: 518 WPYFLKHKDDTFTAFKNWKVMIERQTERKVKLLRTDNGGEFCSHAFNDYCRQEGIVRHHT 577

Query: 146 VPYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAVHTAAYLIN 3
           +P+TPQQNGVAERMNRT++ R R ML+ + ++KRFW EA  TA YLIN
Sbjct: 578 IPHTPQQNGVAERMNRTIISRARCMLSHARMNKRFWAEAASTACYLIN 625


>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1278

 Score =  144 bits (362), Expect = 2e-32
 Identities = 62/108 (57%), Positives = 82/108 (75%)
 Frame = -2

Query: 326 WVFLMKNKSDVFEKFKNWKILIENQTGKRIKTLRTDNGLEFCNNLFDNLCAEFGIRRHKT 147
           W + +K+K D F  FK WK++IE QT K +K LRTDN  EFC++ FD+ C + GI RH T
Sbjct: 519 WPYFLKHKDDTFAAFKEWKVMIERQTEKEVKVLRTDNAGEFCSDAFDDYCRKEGIVRHHT 578

Query: 146 VPYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAVHTAAYLIN 3
           +PYTPQQNGVAERMNRT++ + R ML+++ ++KRFW EA +TA YLIN
Sbjct: 579 IPYTPQQNGVAERMNRTIISKARCMLSNARMNKRFWAEAANTACYLIN 626


>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1333

 Score =  144 bits (362), Expect = 2e-32
 Identities = 62/108 (57%), Positives = 83/108 (76%)
 Frame = -2

Query: 326 WVFLMKNKSDVFEKFKNWKILIENQTGKRIKTLRTDNGLEFCNNLFDNLCAEFGIRRHKT 147
           W + +K+K D F  FKNWK++IE QT +++K LRTDNG EFC++ F++ C + GI RH T
Sbjct: 518 WPYFLKHKDDTFTAFKNWKVMIERQTERKVKLLRTDNGGEFCSHAFNDYCRQEGIVRHHT 577

Query: 146 VPYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAVHTAAYLIN 3
           +P+TPQQNGVAERMNRT++ R R ML+ + ++KRFW EA  TA YLIN
Sbjct: 578 IPHTPQQNGVAERMNRTIISRARCMLSHARMNKRFWAEAASTACYLIN 625