BLASTX nr result

ID: Rehmannia23_contig00024616 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00024616
         (622 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF64710.1| putative transposase [Ipomoea tricolor]                46   1e-08
gb|ABD83325.1| Fgenesh protein 114 [Beta vulgaris]                     40   3e-06
gb|EOY02423.1| PIF1 helicase, putative [Theobroma cacao]               56   7e-06

>dbj|BAF64710.1| putative transposase [Ipomoea tricolor]
          Length = 517

 Score = 45.8 bits (107), Expect(2) = 1e-08
 Identities = 25/80 (31%), Positives = 45/80 (56%)
 Frame = +3

Query: 249 IDQFKKILKEGRVYAIRDFIVANQTDKYKATTTKHKIFFHGRTNVFEMFDSSFQRFMFNF 428
           ++++  +LK G+VY+IR+F+V +    YK +  K+ + F+ +T V E+ D  F   MF  
Sbjct: 63  VEKYSAMLKIGQVYSIRNFLVISNFYTYKTSPHKYMLKFYYKTVVRELKDIVFPSHMFRL 122

Query: 429 KNFSELSNIDAIDETLLFGM 488
           +  S+L     I+E  L  +
Sbjct: 123 QPLSQLKQKIDINEKELIDL 142



 Score = 39.7 bits (91), Expect(2) = 1e-08
 Identities = 19/46 (41%), Positives = 25/46 (54%)
 Frame = +1

Query: 1   PMITLIRDLNMTKTQWVVKFRLIRLYEKPAYNDRNQIQSLECVFHD 138
           P+  L RD++   T   +K RLIR YE P       I+  EC+FHD
Sbjct: 3   PLYILGRDISPMNTTSAIKVRLIRSYEVPERRGAASIKCQECIFHD 48


>gb|ABD83325.1| Fgenesh protein 114 [Beta vulgaris]
          Length = 119

 Score = 40.4 bits (93), Expect(2) = 3e-06
 Identities = 20/72 (27%), Positives = 39/72 (54%)
 Frame = +3

Query: 213 GDRIQGIVRRFQIDQFKKILKEGRVYAIRDFIVANQTDKYKATTTKHKIFFHGRTNVFEM 392
           GD+IQ  V++F + +F  +L EG+   I +F V   +  Y+ T+  +KI F  +  +   
Sbjct: 51  GDKIQASVKKFLVRRFSHLLDEGQCRVISNFGVGENSGSYRPTSHPYKINFFSQLGL--- 107

Query: 393 FDSSFQRFMFNF 428
              + + ++FN+
Sbjct: 108 --KNVKTYLFNY 117



 Score = 37.0 bits (84), Expect(2) = 3e-06
 Identities = 14/40 (35%), Positives = 26/40 (65%)
 Frame = +1

Query: 25  LNMTKTQWVVKFRLIRLYEKPAYNDRNQIQSLECVFHDTK 144
           +N  K  W +K R++RL++ P++ + N+  S+E +F D K
Sbjct: 11  INPIKDSWSIKIRIVRLWKTPSFANPNEDGSIEMIFLDEK 50


>gb|EOY02423.1| PIF1 helicase, putative [Theobroma cacao]
          Length = 1873

 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 32/90 (35%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
 Frame = +3

Query: 213  GDRIQGIVRRFQIDQFKKILKEGRVYAIRDFIVANQTDKYKATTTKHKIFFHGRTNVFEM 392
            G+ IQ I+ +  + +F+ ILKEG VY I DF V+     Y   +    I    +T + + 
Sbjct: 1440 GNAIQAIIHKIHMKEFESILKEGHVYCISDFKVSKPKKSYNVISAPSAITITSKTKIVKA 1499

Query: 393  FDS--SFQRFMFNFKNFSELSNIDAIDETL 476
              S  SFQR  F F  F  L +   I+ETL
Sbjct: 1500 SSSALSFQRHYFQFLEFEHLPHRYKINETL 1529


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