BLASTX nr result

ID: Rehmannia23_contig00024507 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00024507
         (374 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS72703.1| hypothetical protein M569_02052, partial [Genlise...    68   1e-09
gb|EXB93237.1| GDP-mannose 3,5-epimerase 1 [Morus notabilis]           67   2e-09
ref|XP_006347747.1| PREDICTED: mediator of RNA polymerase II tra...    65   1e-08
ref|XP_004230096.1| PREDICTED: mediator of RNA polymerase II tra...    65   1e-08
ref|XP_002531290.1| protein with unknown function [Ricinus commu...    64   2e-08
ref|NP_187125.1| mediator of RNA polymerase II transcription sub...    63   4e-08
ref|XP_006408156.1| hypothetical protein EUTSA_v10019885mg [Eutr...    63   4e-08
gb|EOY11072.1| Mediator of RNA polymerase II transcription subun...    63   4e-08
gb|EMJ09342.1| hypothetical protein PRUPE_ppa000128mg [Prunus pe...    63   4e-08
ref|XP_006432925.1| hypothetical protein CICLE_v10000014mg [Citr...    62   1e-07
ref|XP_004302054.1| PREDICTED: mediator of RNA polymerase II tra...    62   1e-07
ref|XP_002882372.1| hypothetical protein ARALYDRAFT_477743 [Arab...    62   1e-07
emb|CBI34155.3| unnamed protein product [Vitis vinifera]               62   1e-07
ref|XP_002279923.1| PREDICTED: uncharacterized protein LOC100267...    62   1e-07
ref|XP_002328340.1| predicted protein [Populus trichocarpa] gi|5...    62   1e-07
ref|XP_002319641.2| STRUWWELPETER family protein [Populus tricho...    61   2e-07
ref|XP_006296821.1| hypothetical protein CARUB_v10012804mg [Caps...    59   7e-07
ref|XP_006296820.1| hypothetical protein CARUB_v10012804mg [Caps...    59   7e-07
ref|XP_003591404.1| Mediator of RNA polymerase II transcription ...    56   4e-06

>gb|EPS72703.1| hypothetical protein M569_02052, partial [Genlisea aurea]
          Length = 1728

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 37/68 (54%), Positives = 40/68 (58%)
 Frame = +3

Query: 171 MMEVGQETVDFATLVGRAAEESYXXXXXXXXXXXXXXXXXXXXXXIMILKYIVKTQQRML 350
           M E G+ETVDFA LV R AEESY                      IMILKYIVKTQQR L
Sbjct: 1   MEEAGRETVDFAALVRRTAEESYVSLKELVEKSNTSEISSDSEKKIMILKYIVKTQQRFL 60

Query: 351 RLNVLAKW 374
           RLN+L+KW
Sbjct: 61  RLNILSKW 68


>gb|EXB93237.1| GDP-mannose 3,5-epimerase 1 [Morus notabilis]
          Length = 2195

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 38/66 (57%), Positives = 43/66 (65%)
 Frame = +3

Query: 177 EVGQETVDFATLVGRAAEESYXXXXXXXXXXXXXXXXXXXXXXIMILKYIVKTQQRMLRL 356
           E+GQ+TV+F+TLVGRAAEESY                      I ILKY+VKTQQRMLRL
Sbjct: 4   ELGQQTVEFSTLVGRAAEESYLSLKELVEKSRDSDQSDSEKK-INILKYLVKTQQRMLRL 62

Query: 357 NVLAKW 374
           NVLAKW
Sbjct: 63  NVLAKW 68


>ref|XP_006347747.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           14-like [Solanum tuberosum]
          Length = 1791

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 37/68 (54%), Positives = 42/68 (61%)
 Frame = +3

Query: 171 MMEVGQETVDFATLVGRAAEESYXXXXXXXXXXXXXXXXXXXXXXIMILKYIVKTQQRML 350
           M E+GQ+TVDF+ LV RAAEESY                      I ILKY+VKTQQRML
Sbjct: 1   MAELGQQTVDFSALVSRAAEESYVTLKELVEKCKSSNLSDSEKK-IGILKYVVKTQQRML 59

Query: 351 RLNVLAKW 374
           RLNVL+KW
Sbjct: 60  RLNVLSKW 67


>ref|XP_004230096.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           14-like [Solanum lycopersicum]
          Length = 1758

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 37/68 (54%), Positives = 42/68 (61%)
 Frame = +3

Query: 171 MMEVGQETVDFATLVGRAAEESYXXXXXXXXXXXXXXXXXXXXXXIMILKYIVKTQQRML 350
           M E+GQ+TVDF+ LV RAAEESY                      I ILKY+VKTQQRML
Sbjct: 1   MAELGQQTVDFSALVSRAAEESYVTLKELVEKCKSSNLSDSEKK-IGILKYVVKTQQRML 59

Query: 351 RLNVLAKW 374
           RLNVL+KW
Sbjct: 60  RLNVLSKW 67


>ref|XP_002531290.1| protein with unknown function [Ricinus communis]
           gi|223529123|gb|EEF31103.1| protein with unknown
           function [Ricinus communis]
          Length = 1746

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 36/68 (52%), Positives = 43/68 (63%)
 Frame = +3

Query: 171 MMEVGQETVDFATLVGRAAEESYXXXXXXXXXXXXXXXXXXXXXXIMILKYIVKTQQRML 350
           M E+GQ+TV+F+TLV RAAEESY                      I +LK++VKTQQRML
Sbjct: 1   MAELGQQTVEFSTLVSRAAEESYLSLKELVDKSKSAEQSDSEKK-INLLKFLVKTQQRML 59

Query: 351 RLNVLAKW 374
           RLNVLAKW
Sbjct: 60  RLNVLAKW 67


>ref|NP_187125.1| mediator of RNA polymerase II transcription subunit 14 [Arabidopsis
           thaliana] gi|75207288|sp|Q9SR02.1|MED14_ARATH RecName:
           Full=Mediator of RNA polymerase II transcription subunit
           14; AltName: Full=Protein STRUWWELPETER; Short=AtSWP
           gi|6175174|gb|AAF04900.1|AC011437_15 hypothetical
           protein [Arabidopsis thaliana]
           gi|20068999|gb|AAM09647.1|AF466359_1 SWP1 [Arabidopsis
           thaliana] gi|23898273|emb|CAD53582.1| struwwelpeter 1
           protein [Arabidopsis thaliana]
           gi|332640609|gb|AEE74130.1| RNA polymerase II
           transcription mediator [Arabidopsis thaliana]
          Length = 1703

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 34/68 (50%), Positives = 41/68 (60%)
 Frame = +3

Query: 171 MMEVGQETVDFATLVGRAAEESYXXXXXXXXXXXXXXXXXXXXXXIMILKYIVKTQQRML 350
           M E+GQ+TVDF+ LVGRAAEES+                      + +LKY+ KTQQRML
Sbjct: 1   MAELGQQTVDFSALVGRAAEESFLSFKELVDKSKSTELSDTEKK-VSLLKYVAKTQQRML 59

Query: 351 RLNVLAKW 374
           RLN LAKW
Sbjct: 60  RLNALAKW 67


>ref|XP_006408156.1| hypothetical protein EUTSA_v10019885mg [Eutrema salsugineum]
           gi|557109302|gb|ESQ49609.1| hypothetical protein
           EUTSA_v10019885mg [Eutrema salsugineum]
          Length = 1705

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 34/68 (50%), Positives = 42/68 (61%)
 Frame = +3

Query: 171 MMEVGQETVDFATLVGRAAEESYXXXXXXXXXXXXXXXXXXXXXXIMILKYIVKTQQRML 350
           M E+GQ+TV+F+ LVGRAAEES+                      + +LKY+VKTQQRML
Sbjct: 1   MAELGQQTVEFSALVGRAAEESFLSLKELVEKNKSTELSDTDKK-VSLLKYVVKTQQRML 59

Query: 351 RLNVLAKW 374
           RLN LAKW
Sbjct: 60  RLNALAKW 67


>gb|EOY11072.1| Mediator of RNA polymerase II transcription subunit 14 [Theobroma
           cacao]
          Length = 1813

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 36/68 (52%), Positives = 43/68 (63%)
 Frame = +3

Query: 171 MMEVGQETVDFATLVGRAAEESYXXXXXXXXXXXXXXXXXXXXXXIMILKYIVKTQQRML 350
           M E+GQ+TV+F++LV RAAEES+                      I +LKYIVKTQQRML
Sbjct: 1   MAELGQQTVEFSSLVSRAAEESFLSLQELVEKSKSSDQSDTEKK-INLLKYIVKTQQRML 59

Query: 351 RLNVLAKW 374
           RLNVLAKW
Sbjct: 60  RLNVLAKW 67


>gb|EMJ09342.1| hypothetical protein PRUPE_ppa000128mg [Prunus persica]
          Length = 1716

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 33/66 (50%), Positives = 40/66 (60%)
 Frame = +3

Query: 177 EVGQETVDFATLVGRAAEESYXXXXXXXXXXXXXXXXXXXXXXIMILKYIVKTQQRMLRL 356
           E+GQ+TV+F+TLV R AEES+                      I +LKY+ KTQQRMLRL
Sbjct: 4   ELGQQTVEFSTLVNRTAEESFLSLKELVEKSKAAQDQSDTDKKIGLLKYLAKTQQRMLRL 63

Query: 357 NVLAKW 374
           NVLAKW
Sbjct: 64  NVLAKW 69


>ref|XP_006432925.1| hypothetical protein CICLE_v10000014mg [Citrus clementina]
           gi|568835227|ref|XP_006471680.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 14-like [Citrus
           sinensis] gi|557535047|gb|ESR46165.1| hypothetical
           protein CICLE_v10000014mg [Citrus clementina]
          Length = 1820

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 36/68 (52%), Positives = 42/68 (61%)
 Frame = +3

Query: 171 MMEVGQETVDFATLVGRAAEESYXXXXXXXXXXXXXXXXXXXXXXIMILKYIVKTQQRML 350
           M E+GQ+TV F+TLV RAAE+S+                      I +LKYIVKTQQRML
Sbjct: 1   MGELGQQTVPFSTLVSRAAEDSFASLKELVEKSKTGEESDTDKK-INLLKYIVKTQQRML 59

Query: 351 RLNVLAKW 374
           RLNVLAKW
Sbjct: 60  RLNVLAKW 67


>ref|XP_004302054.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           14-like [Fragaria vesca subsp. vesca]
          Length = 1823

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 35/67 (52%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
 Frame = +3

Query: 177 EVGQETVDFATLVGRAAEESYXXXXXXXXXXXXXXXXXXXXXX-IMILKYIVKTQQRMLR 353
           E+GQ+TVDF T+V RAAEES+                       I +LKY+VKTQQRMLR
Sbjct: 4   ELGQQTVDFTTVVNRAAEESFLSLKELMEKSKAEAPELSDTDKKIGLLKYLVKTQQRMLR 63

Query: 354 LNVLAKW 374
           LNVLAKW
Sbjct: 64  LNVLAKW 70


>ref|XP_002882372.1| hypothetical protein ARALYDRAFT_477743 [Arabidopsis lyrata subsp.
           lyrata] gi|297328212|gb|EFH58631.1| hypothetical protein
           ARALYDRAFT_477743 [Arabidopsis lyrata subsp. lyrata]
          Length = 1702

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 33/68 (48%), Positives = 40/68 (58%)
 Frame = +3

Query: 171 MMEVGQETVDFATLVGRAAEESYXXXXXXXXXXXXXXXXXXXXXXIMILKYIVKTQQRML 350
           M E+GQ+TVDF+ LVGR AEES+                      + +LKY+ KTQQRML
Sbjct: 1   MAELGQQTVDFSALVGRTAEESFLSLKELVEKSKSTELSDNEKK-VSLLKYVAKTQQRML 59

Query: 351 RLNVLAKW 374
           RLN LAKW
Sbjct: 60  RLNALAKW 67


>emb|CBI34155.3| unnamed protein product [Vitis vinifera]
          Length = 1724

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 35/68 (51%), Positives = 42/68 (61%)
 Frame = +3

Query: 171 MMEVGQETVDFATLVGRAAEESYXXXXXXXXXXXXXXXXXXXXXXIMILKYIVKTQQRML 350
           M E+G +TV+F+TLV RAAEES+                      I +LK+IVKTQQRML
Sbjct: 1   MAELGHQTVEFSTLVSRAAEESFLSLKDLMEISKSSDQSDSEKK-ISLLKFIVKTQQRML 59

Query: 351 RLNVLAKW 374
           RLNVLAKW
Sbjct: 60  RLNVLAKW 67


>ref|XP_002279923.1| PREDICTED: uncharacterized protein LOC100267561 [Vitis vinifera]
          Length = 1758

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 35/68 (51%), Positives = 42/68 (61%)
 Frame = +3

Query: 171 MMEVGQETVDFATLVGRAAEESYXXXXXXXXXXXXXXXXXXXXXXIMILKYIVKTQQRML 350
           M E+G +TV+F+TLV RAAEES+                      I +LK+IVKTQQRML
Sbjct: 1   MAELGHQTVEFSTLVSRAAEESFLSLKDLMEISKSSDQSDSEKK-ISLLKFIVKTQQRML 59

Query: 351 RLNVLAKW 374
           RLNVLAKW
Sbjct: 60  RLNVLAKW 67


>ref|XP_002328340.1| predicted protein [Populus trichocarpa]
           gi|566169657|ref|XP_006382795.1| STRUWWELPETER family
           protein [Populus trichocarpa]
           gi|550338165|gb|ERP60592.1| STRUWWELPETER family protein
           [Populus trichocarpa]
          Length = 1685

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 35/68 (51%), Positives = 42/68 (61%)
 Frame = +3

Query: 171 MMEVGQETVDFATLVGRAAEESYXXXXXXXXXXXXXXXXXXXXXXIMILKYIVKTQQRML 350
           M E+GQ TVDF+TLV RAAEES+                      I +LKY+++TQQRML
Sbjct: 1   MGELGQHTVDFSTLVSRAAEESFLSLKELVDKSKSTDQSDSEKK-ISLLKYLLETQQRML 59

Query: 351 RLNVLAKW 374
           RLNVLAKW
Sbjct: 60  RLNVLAKW 67


>ref|XP_002319641.2| STRUWWELPETER family protein [Populus trichocarpa]
           gi|550324900|gb|EEE95564.2| STRUWWELPETER family protein
           [Populus trichocarpa]
          Length = 1740

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 34/68 (50%), Positives = 42/68 (61%)
 Frame = +3

Query: 171 MMEVGQETVDFATLVGRAAEESYXXXXXXXXXXXXXXXXXXXXXXIMILKYIVKTQQRML 350
           M E+GQ+TV+F+TLV RAAE+S+                      I +LKY+V TQQRML
Sbjct: 1   MAELGQQTVEFSTLVSRAAEDSFLSLKELVDKSKSTQQSDSDKK-ISLLKYLVHTQQRML 59

Query: 351 RLNVLAKW 374
           RLNVLAKW
Sbjct: 60  RLNVLAKW 67


>ref|XP_006296821.1| hypothetical protein CARUB_v10012804mg [Capsella rubella]
           gi|482565530|gb|EOA29719.1| hypothetical protein
           CARUB_v10012804mg [Capsella rubella]
          Length = 1697

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 32/68 (47%), Positives = 40/68 (58%)
 Frame = +3

Query: 171 MMEVGQETVDFATLVGRAAEESYXXXXXXXXXXXXXXXXXXXXXXIMILKYIVKTQQRML 350
           M E+GQ+TVDF+ L GRAAEES+                      + +LKY+V TQQR+L
Sbjct: 1   MAELGQQTVDFSALFGRAAEESFLSLKELVEKFKTTELSDTDKK-VSLLKYLVNTQQRVL 59

Query: 351 RLNVLAKW 374
           RLN LAKW
Sbjct: 60  RLNALAKW 67


>ref|XP_006296820.1| hypothetical protein CARUB_v10012804mg [Capsella rubella]
           gi|482565529|gb|EOA29718.1| hypothetical protein
           CARUB_v10012804mg [Capsella rubella]
          Length = 1680

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 32/68 (47%), Positives = 40/68 (58%)
 Frame = +3

Query: 171 MMEVGQETVDFATLVGRAAEESYXXXXXXXXXXXXXXXXXXXXXXIMILKYIVKTQQRML 350
           M E+GQ+TVDF+ L GRAAEES+                      + +LKY+V TQQR+L
Sbjct: 1   MAELGQQTVDFSALFGRAAEESFLSLKELVEKFKTTELSDTDKK-VSLLKYLVNTQQRVL 59

Query: 351 RLNVLAKW 374
           RLN LAKW
Sbjct: 60  RLNALAKW 67


>ref|XP_003591404.1| Mediator of RNA polymerase II transcription subunit [Medicago
           truncatula] gi|355480452|gb|AES61655.1| Mediator of RNA
           polymerase II transcription subunit [Medicago
           truncatula]
          Length = 1765

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 28/66 (42%), Positives = 40/66 (60%)
 Frame = +3

Query: 177 EVGQETVDFATLVGRAAEESYXXXXXXXXXXXXXXXXXXXXXXIMILKYIVKTQQRMLRL 356
           E+GQ+TV+ +TLV RAA++SY                      I +LK++ KT+QRM+RL
Sbjct: 5   ELGQQTVELSTLVTRAAQDSYNSLKDLVHKCSCSTELSDTDKKISMLKFLTKTRQRMIRL 64

Query: 357 NVLAKW 374
           NVL+KW
Sbjct: 65  NVLSKW 70