BLASTX nr result
ID: Rehmannia23_contig00024216
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00024216
(636 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004230035.1| PREDICTED: sigma factor binding protein 1, c... 84 3e-14
ref|XP_002303937.1| hypothetical protein POPTR_0003s19420g [Popu... 80 4e-13
ref|XP_002513029.1| protein with unknown function [Ricinus commu... 74 3e-11
ref|XP_006368633.1| hypothetical protein POPTR_0001s06690g [Popu... 71 2e-10
gb|EPS64879.1| hypothetical protein M569_09902, partial [Genlise... 66 1e-08
gb|EXB62680.1| hypothetical protein L484_023976 [Morus notabilis] 65 1e-08
gb|EOY19727.1| Sigma factor binding protein 1, putative [Theobro... 65 1e-08
ref|XP_004308571.1| PREDICTED: sigma factor binding protein 2, c... 62 1e-07
emb|CAN69541.1| hypothetical protein VITISV_025656 [Vitis vinifera] 62 1e-07
gb|EMJ19788.1| hypothetical protein PRUPE_ppa013276mg [Prunus pe... 61 3e-07
ref|XP_004142385.1| PREDICTED: sigma factor binding protein 1, c... 61 3e-07
gb|ESW35880.1| hypothetical protein PHAVU_L008100g [Phaseolus vu... 60 4e-07
ref|XP_002322621.1| hypothetical protein POPTR_0016s03600g [Popu... 60 7e-07
dbj|BAI52954.1| sigma factor binding protein 1 [Citrullus lanatu... 57 3e-06
gb|EXB38304.1| hypothetical protein L484_013937 [Morus notabilis] 57 5e-06
ref|XP_003567215.1| PREDICTED: uncharacterized protein LOC100832... 57 5e-06
>ref|XP_004230035.1| PREDICTED: sigma factor binding protein 1, chloroplastic-like
[Solanum lycopersicum]
Length = 158
Score = 84.3 bits (207), Expect = 3e-14
Identities = 61/140 (43%), Positives = 85/140 (60%), Gaps = 15/140 (10%)
Frame = +1
Query: 106 SLKVVYISSPMKVKTSALRFRSLVQQLTGKNSDISQYMDDNNNYMT-RDFHED----HEL 270
+ KVVYIS+PMKVKTSA RFRSLVQ+LTG++SDI++ M+ N + D H + +EL
Sbjct: 20 NFKVVYISTPMKVKTSASRFRSLVQELTGRDSDIARIMETNGSITEYEDIHSERDDFNEL 79
Query: 271 LAKETSNDRYQYLSSSISPEDTPTSSDS---FLGP-MDKVFMSQMKEQLLFEGMFSSSD- 435
K +S L+ S TP SS+S F+ P D +F SQM+EQ L +SS+
Sbjct: 80 PVKSSSPSSSSLLAK--SSNSTPMSSESDNYFIEPNFDDLFNSQMQEQFL--AFLASSNY 135
Query: 436 -----SFYHASQMDVLGSFD 480
S + +++DVLGS+D
Sbjct: 136 NLPPRSGDYLAEIDVLGSYD 155
>ref|XP_002303937.1| hypothetical protein POPTR_0003s19420g [Populus trichocarpa]
gi|222841369|gb|EEE78916.1| hypothetical protein
POPTR_0003s19420g [Populus trichocarpa]
Length = 138
Score = 80.5 bits (197), Expect = 4e-13
Identities = 53/122 (43%), Positives = 72/122 (59%), Gaps = 1/122 (0%)
Frame = +1
Query: 106 SLKVVYISSPMKVKTSALRFRSLVQQLTGKNSDISQYMDDNNNYMTRDFHE-DHELLAKE 282
++KVVYISSPMKVKTSA +FR+LVQ+LTGK+SD ++MD N RD E H+ +
Sbjct: 22 AIKVVYISSPMKVKTSASKFRALVQELTGKDSDAERFMDING---ARDSLEIPHQTAEYD 78
Query: 283 TSNDRYQYLSSSISPEDTPTSSDSFLGPMDKVFMSQMKEQLLFEGMFSSSDSFYHASQMD 462
+ +S + TSS+SFLG +D F M+ F GM S F+ + Q+D
Sbjct: 79 HHPSVFPLTNSCNDQSPSTTSSESFLGSLDGEFFPSMEGS--FMGMLQPS-LFHESFQLD 135
Query: 463 VL 468
VL
Sbjct: 136 VL 137
>ref|XP_002513029.1| protein with unknown function [Ricinus communis]
gi|223548040|gb|EEF49532.1| protein with unknown
function [Ricinus communis]
Length = 143
Score = 74.3 bits (181), Expect = 3e-11
Identities = 53/125 (42%), Positives = 72/125 (57%), Gaps = 6/125 (4%)
Frame = +1
Query: 109 LKVVYISSPMKVKTSALRFRSLVQQLTGKNSDISQYMDDNN---NYMTRDFHEDHELLAK 279
+KVVYISSPMKV+TSA +FR+LVQ+LTGK+SD +++MD NN NY T + +
Sbjct: 22 IKVVYISSPMKVETSASKFRALVQELTGKDSDAARFMDVNNGAENYSTETTPDRSRAASD 81
Query: 280 ETSNDRYQYLSSSISP--EDTPTSSDSFLGPMDKVFMSQMKEQLLFEGMFSSSDSFYHAS 453
E + +SS P +P S S P D+ F+ M+ F MF S +F H S
Sbjct: 82 EHGSVLLPLMSSYNEPSFSSSPDSDSSIFDPFDR-FLPPMEGS--FMSMFQS--NFPHES 136
Query: 454 -QMDV 465
Q+DV
Sbjct: 137 FQLDV 141
>ref|XP_006368633.1| hypothetical protein POPTR_0001s06690g [Populus trichocarpa]
gi|550346683|gb|ERP65202.1| hypothetical protein
POPTR_0001s06690g [Populus trichocarpa]
Length = 151
Score = 71.2 bits (173), Expect = 2e-10
Identities = 49/123 (39%), Positives = 66/123 (53%)
Frame = +1
Query: 106 SLKVVYISSPMKVKTSALRFRSLVQQLTGKNSDISQYMDDNNNYMTRDFHEDHELLAKET 285
++KVVYISSPMKVKTSA FR+LVQ+LTGK+SD +++MD N
Sbjct: 15 AIKVVYISSPMKVKTSASEFRALVQELTGKDSDAARFMDIN------------------- 55
Query: 286 SNDRYQYLSSSISPEDTPTSSDSFLGPMDKVFMSQMKEQLLFEGMFSSSDSFYHASQMDV 465
S++ S + TSS+SFL D M+E F GM SS F+ + Q+D
Sbjct: 56 ------VPSTNSSQSPSTTSSESFLESFDGELFPSMEES-TFMGMLQSS-LFHESFQLDF 107
Query: 466 LGS 474
+ S
Sbjct: 108 MNS 110
>gb|EPS64879.1| hypothetical protein M569_09902, partial [Genlisea aurea]
Length = 55
Score = 65.9 bits (159), Expect = 1e-08
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = +1
Query: 109 LKVVYISSPMKVKTSALRFRSLVQQLTGKNSDISQY 216
LKVVYIS+PMKVKTSA FRSLVQQLTGKNSDISQY
Sbjct: 19 LKVVYISTPMKVKTSASNFRSLVQQLTGKNSDISQY 54
>gb|EXB62680.1| hypothetical protein L484_023976 [Morus notabilis]
Length = 125
Score = 65.5 bits (158), Expect = 1e-08
Identities = 40/93 (43%), Positives = 56/93 (60%), Gaps = 16/93 (17%)
Frame = +1
Query: 109 LKVVYISSPMKVKTSALRFRSLVQQLTGKNSDISQYMDDNN----NYMTRDFHEDHELLA 276
+KVVYISSPMKVKTSA FR+LVQ+LTG+NSD ++M++ N N D + H+++
Sbjct: 24 VKVVYISSPMKVKTSASEFRALVQELTGRNSDAERFMEEINGVGINTANLDDQDQHQMMM 83
Query: 277 KETS-------NDRYQYLSSSIS-----PEDTP 339
K S +D Y + +S S PE +P
Sbjct: 84 KSGSVEGGSHESDHYNFNINSSSEYSSLPEYSP 116
>gb|EOY19727.1| Sigma factor binding protein 1, putative [Theobroma cacao]
Length = 144
Score = 65.5 bits (158), Expect = 1e-08
Identities = 48/125 (38%), Positives = 66/125 (52%), Gaps = 1/125 (0%)
Frame = +1
Query: 109 LKVVYISSPMKVKTSALRFRSLVQQLTGKNSDIS-QYMDDNNNYMTRDFHEDHELLAKET 285
+KVVYISSPMKVKT A +FR+LVQ+LTGK+SD+S Q+MD+ + H D E
Sbjct: 25 IKVVYISSPMKVKTCASQFRALVQELTGKDSDVSVQFMDNYGSSENSPTHSDVTTTTTER 84
Query: 286 SNDRYQYLSSSISPEDTPTSSDSFLGPMDKVFMSQMKEQLLFEGMFSSSDSFYHASQMDV 465
D + + P S P D + + F GMF+SS + SQ++
Sbjct: 85 VVDDDRVVRG--LPLGNSNHEFSVFEPFDDGLIMEGS----FLGMFTSS-LLHDPSQLEA 137
Query: 466 LGSFD 480
+ SFD
Sbjct: 138 VRSFD 142
>ref|XP_004308571.1| PREDICTED: sigma factor binding protein 2, chloroplastic-like
[Fragaria vesca subsp. vesca]
Length = 132
Score = 62.0 bits (149), Expect = 1e-07
Identities = 38/94 (40%), Positives = 52/94 (55%), Gaps = 8/94 (8%)
Frame = +1
Query: 109 LKVVYISSPMKVKTSALRFRSLVQQLTGKNSDISQYMDDNNNYMTRDFHE----DHELLA 276
+KVVYISSPMKV+TSA +FR+LVQ+LTG++SD ++M+ N H+ HE
Sbjct: 23 VKVVYISSPMKVQTSASKFRALVQELTGRDSDAERFMETNGGDGHHRHHKVPEFSHEKQL 82
Query: 277 KETSNDR----YQYLSSSISPEDTPTSSDSFLGP 366
KE D + + S S + P SD P
Sbjct: 83 KEADRDHLVFPHHQIPFSNSIYELPNFSDFLFEP 116
>emb|CAN69541.1| hypothetical protein VITISV_025656 [Vitis vinifera]
Length = 124
Score = 62.0 bits (149), Expect = 1e-07
Identities = 28/47 (59%), Positives = 40/47 (85%)
Frame = +1
Query: 106 SLKVVYISSPMKVKTSALRFRSLVQQLTGKNSDISQYMDDNNNYMTR 246
++KVVYISSPMKVKTSA +FR+LVQ+LTG++SD+ +YM++ +R
Sbjct: 11 AVKVVYISSPMKVKTSASKFRALVQELTGRDSDVERYMENKEREESR 57
>gb|EMJ19788.1| hypothetical protein PRUPE_ppa013276mg [Prunus persica]
Length = 131
Score = 60.8 bits (146), Expect = 3e-07
Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Frame = +1
Query: 109 LKVVYISSPMKVKTSALRFRSLVQQLTGKNSDISQYMDDNNNYMTRDFHEDHELLAKETS 288
+KVVYISSPMKVKTSA +FR+LVQ+LTG++SD ++M+ + HE K
Sbjct: 24 VKVVYISSPMKVKTSASKFRALVQELTGRDSDAERFMETKGAHYQNVHELTHEQQLKGVD 83
Query: 289 NDR------YQYLSSSISPEDTPTSSDSFLGPMDKVF 381
+D L S S + P SD+ P F
Sbjct: 84 HDHDHDHGLLPQLPFSNSFFEFPNCSDALFEPFSGHF 120
>ref|XP_004142385.1| PREDICTED: sigma factor binding protein 1, chloroplastic-like
[Cucumis sativus] gi|449487122|ref|XP_004157503.1|
PREDICTED: sigma factor binding protein 1,
chloroplastic-like [Cucumis sativus]
Length = 140
Score = 60.8 bits (146), Expect = 3e-07
Identities = 32/64 (50%), Positives = 43/64 (67%), Gaps = 7/64 (10%)
Frame = +1
Query: 112 KVVYISSPMKVKTSALRFRSLVQQLTGKNSDISQYM-------DDNNNYMTRDFHEDHEL 270
KVVYISSPMKVKTSA +FRSLVQ+LTG++SD ++M D N + DH++
Sbjct: 21 KVVYISSPMKVKTSASKFRSLVQKLTGQDSDAERFMEMASGGSDGNGEWWASASFVDHQV 80
Query: 271 LAKE 282
+ +E
Sbjct: 81 MGEE 84
>gb|ESW35880.1| hypothetical protein PHAVU_L008100g [Phaseolus vulgaris]
Length = 117
Score = 60.5 bits (145), Expect = 4e-07
Identities = 36/92 (39%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Frame = +1
Query: 109 LKVVYISSPMKVKTSALRFRSLVQQLTGKNSDI---SQYMDDNNNYMTRDFHEDHELLAK 279
+KV YISSP+KVKTSA FR+LVQ+LTG+ S++ S M++ N ++ R H+ HE A+
Sbjct: 14 IKVTYISSPVKVKTSASNFRALVQELTGQYSNVAETSMPMEEENEHLERLVHKTHESEAQ 73
Query: 280 ETSNDRYQYLSSSISPEDTPTSSDSFLGPMDK 375
+ D + + + PE + S S + P ++
Sbjct: 74 QWRVD-VESTNLMMRPEYSEFMSRSLMEPFNQ 104
>ref|XP_002322621.1| hypothetical protein POPTR_0016s03600g [Populus trichocarpa]
gi|222867251|gb|EEF04382.1| hypothetical protein
POPTR_0016s03600g [Populus trichocarpa]
Length = 156
Score = 59.7 bits (143), Expect = 7e-07
Identities = 46/127 (36%), Positives = 66/127 (51%), Gaps = 13/127 (10%)
Frame = +1
Query: 109 LKVVYISSPMKVKTSALRFRSLVQQLTGKNSDI---SQYMDDNN-----NYMT-----RD 249
+KVVYIS+PMK K SA FR+LVQ+LTG++S++ ++ +DD++ NY T +
Sbjct: 29 MKVVYISNPMKFKISASGFRALVQELTGQDSELPDPTKIVDDDDHGVGGNYRTVSNASKT 88
Query: 250 FHEDHELLAKETSNDRYQYLSSSISPEDTPTSSDSFLGPMDKVFMSQMKEQLLFEGMFSS 429
+DH L T + S E P D+ G D VFM QM E +
Sbjct: 89 VVDDHCALEVPTKDP---------SQEQPPARQDAPFGSFDDVFMPQMLENV---AGIMP 136
Query: 430 SDSFYHA 450
S+S+Y A
Sbjct: 137 SNSWYEA 143
>dbj|BAI52954.1| sigma factor binding protein 1 [Citrullus lanatus subsp. vulgaris]
Length = 146
Score = 57.4 bits (137), Expect = 3e-06
Identities = 27/37 (72%), Positives = 34/37 (91%)
Frame = +1
Query: 112 KVVYISSPMKVKTSALRFRSLVQQLTGKNSDISQYMD 222
KVVYISSPMKVKTSA +FRSLVQ+LTG++SD ++M+
Sbjct: 21 KVVYISSPMKVKTSASKFRSLVQRLTGQDSDAERFME 57
>gb|EXB38304.1| hypothetical protein L484_013937 [Morus notabilis]
Length = 161
Score = 57.0 bits (136), Expect = 5e-06
Identities = 50/135 (37%), Positives = 71/135 (52%), Gaps = 11/135 (8%)
Frame = +1
Query: 109 LKVVYISSPMKVKTSALRFRSLVQQLTGKNS---DISQYMDDNNNYMTRDFHEDHELLAK 279
+KVVYIS+PMK+KTSA FR+LVQ+LTG+++ D ++++ N + +
Sbjct: 31 VKVVYISNPMKIKTSASEFRALVQELTGQDAEFPDPTKFLATNGEDQVG--VDSTVKIGG 88
Query: 280 ETSNDRYQYLSSSISPEDTPTSSDSFLGPMDKVFMSQMKEQLLFE-GMFSSS-------D 435
+ SN + Q + S + T TS L D VFM QM E FE G+F SS D
Sbjct: 89 DHSNSQEQGATESNNSSTTTTSRYEALD--DDVFMPQMMES--FEAGIFPSSATASVWYD 144
Query: 436 SFYHASQMDVLGSFD 480
S + DV+ S D
Sbjct: 145 SANYHQVHDVIRSLD 159
>ref|XP_003567215.1| PREDICTED: uncharacterized protein LOC100832135 [Brachypodium
distachyon]
Length = 162
Score = 57.0 bits (136), Expect = 5e-06
Identities = 29/65 (44%), Positives = 43/65 (66%)
Frame = +1
Query: 109 LKVVYISSPMKVKTSALRFRSLVQQLTGKNSDISQYMDDNNNYMTRDFHEDHELLAKETS 288
+KVVYIS+PM+VKTSA FR+LVQ+LTG+++D S+Y D++ ++ + A T
Sbjct: 41 IKVVYISNPMRVKTSAAGFRALVQELTGRDADPSKYSTDDDGGAAQELSPEGSAAAPGTV 100
Query: 289 NDRYQ 303
YQ
Sbjct: 101 AAGYQ 105