BLASTX nr result
ID: Rehmannia23_contig00024046
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00024046
(433 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006357349.1| PREDICTED: pentatricopeptide repeat-containi... 121 8e-26
ref|XP_004237632.1| PREDICTED: pentatricopeptide repeat-containi... 121 8e-26
gb|EMJ15377.1| hypothetical protein PRUPE_ppa019185mg [Prunus pe... 119 3e-25
ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containi... 118 9e-25
emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera] 118 9e-25
ref|XP_004308608.1| PREDICTED: pentatricopeptide repeat-containi... 117 1e-24
ref|XP_003545972.2| PREDICTED: pentatricopeptide repeat-containi... 115 5e-24
ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 115 6e-24
gb|ESW25017.1| hypothetical protein PHAVU_003G001300g [Phaseolus... 115 8e-24
gb|EOY28177.1| Tetratricopeptide repeat-like superfamily protein... 114 1e-23
ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group] g... 113 2e-23
gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japo... 113 2e-23
gb|EAY73966.1| hypothetical protein OsI_01850 [Oryza sativa Indi... 113 2e-23
ref|XP_006660454.1| PREDICTED: pentatricopeptide repeat-containi... 111 1e-22
gb|EMT08309.1| hypothetical protein F775_09081 [Aegilops tauschii] 111 1e-22
ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group] g... 111 1e-22
gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japo... 111 1e-22
gb|EEC84168.1| hypothetical protein OsI_30545 [Oryza sativa Indi... 111 1e-22
ref|XP_004952954.1| PREDICTED: pentatricopeptide repeat-containi... 110 2e-22
ref|XP_002305120.2| hypothetical protein POPTR_0004s04740g [Popu... 109 3e-22
>ref|XP_006357349.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like isoform X1 [Solanum tuberosum]
gi|565382025|ref|XP_006357350.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like isoform X2 [Solanum tuberosum]
gi|565382027|ref|XP_006357351.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like isoform X3 [Solanum tuberosum]
Length = 918
Score = 121 bits (304), Expect = 8e-26
Identities = 52/55 (94%), Positives = 55/55 (100%)
Frame = +1
Query: 1 PPGAPIRVEKNLRICLDCHTAFKYICKIVSREIIIRDINRFHHFRDGSCSCGDYW 165
PPGAPIRV+KNLRICLDCHTAFK+ICKIVSREIIIRDINRFHHF+DGSCSCGDYW
Sbjct: 864 PPGAPIRVKKNLRICLDCHTAFKFICKIVSREIIIRDINRFHHFKDGSCSCGDYW 918
>ref|XP_004237632.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Solanum lycopersicum]
Length = 914
Score = 121 bits (304), Expect = 8e-26
Identities = 52/55 (94%), Positives = 55/55 (100%)
Frame = +1
Query: 1 PPGAPIRVEKNLRICLDCHTAFKYICKIVSREIIIRDINRFHHFRDGSCSCGDYW 165
PPGAPIRV+KNLRICLDCHTAFK+ICKIVSREIIIRDINRFHHF+DGSCSCGDYW
Sbjct: 860 PPGAPIRVKKNLRICLDCHTAFKFICKIVSREIIIRDINRFHHFKDGSCSCGDYW 914
>gb|EMJ15377.1| hypothetical protein PRUPE_ppa019185mg [Prunus persica]
Length = 858
Score = 119 bits (299), Expect = 3e-25
Identities = 49/55 (89%), Positives = 55/55 (100%)
Frame = +1
Query: 1 PPGAPIRVEKNLRICLDCHTAFKYICKIVSREIIIRDINRFHHFRDGSCSCGDYW 165
PPGAPIRV+KNLR+C+DCHTAFK+ICKIVSREII+RDINRFHHF+DGSCSCGDYW
Sbjct: 804 PPGAPIRVKKNLRVCVDCHTAFKFICKIVSREIIVRDINRFHHFKDGSCSCGDYW 858
>ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 933
Score = 118 bits (295), Expect = 9e-25
Identities = 49/55 (89%), Positives = 54/55 (98%)
Frame = +1
Query: 1 PPGAPIRVEKNLRICLDCHTAFKYICKIVSREIIIRDINRFHHFRDGSCSCGDYW 165
P GAPIRV+KNLR+C+DCHTAFKYICKIVSREII+RDINRFHHF+DGSCSCGDYW
Sbjct: 879 PQGAPIRVKKNLRVCVDCHTAFKYICKIVSREIIVRDINRFHHFKDGSCSCGDYW 933
>emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 118 bits (295), Expect = 9e-25
Identities = 49/55 (89%), Positives = 54/55 (98%)
Frame = +1
Query: 1 PPGAPIRVEKNLRICLDCHTAFKYICKIVSREIIIRDINRFHHFRDGSCSCGDYW 165
P GAPIRV+KNLR+C+DCHTAFKYICKIVSREII+RDINRFHHF+DGSCSCGDYW
Sbjct: 852 PQGAPIRVKKNLRVCVDCHTAFKYICKIVSREIIVRDINRFHHFKDGSCSCGDYW 906
>ref|XP_004308608.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Fragaria vesca subsp. vesca]
Length = 861
Score = 117 bits (294), Expect = 1e-24
Identities = 47/55 (85%), Positives = 54/55 (98%)
Frame = +1
Query: 1 PPGAPIRVEKNLRICLDCHTAFKYICKIVSREIIIRDINRFHHFRDGSCSCGDYW 165
PPGAPIRV+KNLR+C+DCHTAFK+ICKI SREII+RD+NRFHHF+DGSCSCGDYW
Sbjct: 807 PPGAPIRVKKNLRVCVDCHTAFKFICKITSREIIVRDVNRFHHFKDGSCSCGDYW 861
>ref|XP_003545972.2| PREDICTED: pentatricopeptide repeat-containing protein At3g63370-like
[Glycine max]
Length = 930
Score = 115 bits (289), Expect = 5e-24
Identities = 47/55 (85%), Positives = 53/55 (96%)
Frame = +1
Query: 1 PPGAPIRVEKNLRICLDCHTAFKYICKIVSREIIIRDINRFHHFRDGSCSCGDYW 165
PPG PIRV+KNLRIC+DCHT FK++CKIVSREII+RDINRFHHF+DGSCSCGDYW
Sbjct: 876 PPGGPIRVKKNLRICVDCHTFFKFVCKIVSREIIVRDINRFHHFKDGSCSCGDYW 930
>ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 115 bits (288), Expect = 6e-24
Identities = 47/55 (85%), Positives = 53/55 (96%)
Frame = +1
Query: 1 PPGAPIRVEKNLRICLDCHTAFKYICKIVSREIIIRDINRFHHFRDGSCSCGDYW 165
PPGAPIRV+KNLR+C+DCHTAFK+I K+ SREII+RDINRFHHFRDGSCSCGDYW
Sbjct: 809 PPGAPIRVKKNLRVCIDCHTAFKFISKVASREIIVRDINRFHHFRDGSCSCGDYW 863
>gb|ESW25017.1| hypothetical protein PHAVU_003G001300g [Phaseolus vulgaris]
Length = 858
Score = 115 bits (287), Expect = 8e-24
Identities = 47/55 (85%), Positives = 53/55 (96%)
Frame = +1
Query: 1 PPGAPIRVEKNLRICLDCHTAFKYICKIVSREIIIRDINRFHHFRDGSCSCGDYW 165
PPGAPIRV+KNLRIC+DCH FK++CKIVSREII+RDINRFHHF+DGSCSCGDYW
Sbjct: 804 PPGAPIRVKKNLRICVDCHIFFKFVCKIVSREIIVRDINRFHHFKDGSCSCGDYW 858
>gb|EOY28177.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
Length = 946
Score = 114 bits (286), Expect = 1e-23
Identities = 47/55 (85%), Positives = 54/55 (98%)
Frame = +1
Query: 1 PPGAPIRVEKNLRICLDCHTAFKYICKIVSREIIIRDINRFHHFRDGSCSCGDYW 165
PPGAPIRV+KNLR+C+DCHTAFK+I KIVSREII+RDINR+HHF+DGSCSCGDYW
Sbjct: 892 PPGAPIRVKKNLRVCVDCHTAFKFISKIVSREIIVRDINRYHHFKDGSCSCGDYW 946
>ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR)
repeat-containing protein-like [Oryza sativa Japonica
Group] gi|215768699|dbj|BAH00928.1| unnamed protein
product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa
Japonica Group]
Length = 877
Score = 113 bits (283), Expect = 2e-23
Identities = 49/55 (89%), Positives = 52/55 (94%)
Frame = +1
Query: 1 PPGAPIRVEKNLRICLDCHTAFKYICKIVSREIIIRDINRFHHFRDGSCSCGDYW 165
PPGAPIRV+KNLRIC DCH AFK+I KIVSREIIIRDINRFHHFRDG+CSCGDYW
Sbjct: 823 PPGAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRDINRFHHFRDGTCSCGDYW 877
>gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 113 bits (283), Expect = 2e-23
Identities = 49/55 (89%), Positives = 52/55 (94%)
Frame = +1
Query: 1 PPGAPIRVEKNLRICLDCHTAFKYICKIVSREIIIRDINRFHHFRDGSCSCGDYW 165
PPGAPIRV+KNLRIC DCH AFK+I KIVSREIIIRDINRFHHFRDG+CSCGDYW
Sbjct: 823 PPGAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRDINRFHHFRDGTCSCGDYW 877
>gb|EAY73966.1| hypothetical protein OsI_01850 [Oryza sativa Indica Group]
Length = 641
Score = 113 bits (283), Expect = 2e-23
Identities = 49/55 (89%), Positives = 52/55 (94%)
Frame = +1
Query: 1 PPGAPIRVEKNLRICLDCHTAFKYICKIVSREIIIRDINRFHHFRDGSCSCGDYW 165
PPGAPIRV+KNLRIC DCH AFK+I KIVSREIIIRDINRFHHFRDG+CSCGDYW
Sbjct: 587 PPGAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRDINRFHHFRDGTCSCGDYW 641
>ref|XP_006660454.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Oryza brachyantha]
Length = 877
Score = 111 bits (277), Expect = 1e-22
Identities = 49/55 (89%), Positives = 51/55 (92%)
Frame = +1
Query: 1 PPGAPIRVEKNLRICLDCHTAFKYICKIVSREIIIRDINRFHHFRDGSCSCGDYW 165
P GAPIRV+KNLRIC DCH AFK+I KIVSREIIIRDINRFHHFRDGSCSCGDYW
Sbjct: 823 PHGAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRDINRFHHFRDGSCSCGDYW 877
>gb|EMT08309.1| hypothetical protein F775_09081 [Aegilops tauschii]
Length = 877
Score = 111 bits (277), Expect = 1e-22
Identities = 48/55 (87%), Positives = 51/55 (92%)
Frame = +1
Query: 1 PPGAPIRVEKNLRICLDCHTAFKYICKIVSREIIIRDINRFHHFRDGSCSCGDYW 165
PPGAPIRV+KNLRIC DCH AFK+I KIVSREIIIRDINRFHHF DG+CSCGDYW
Sbjct: 823 PPGAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRDINRFHHFSDGACSCGDYW 877
>ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR)
repeat-containing protein-like [Oryza sativa Japonica
Group] gi|47848643|dbj|BAD22491.1| pentatricopeptide
(PPR) repeat-containing protein-like [Oryza sativa
Japonica Group] gi|113630915|dbj|BAF24596.1|
Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 877
Score = 111 bits (277), Expect = 1e-22
Identities = 48/55 (87%), Positives = 51/55 (92%)
Frame = +1
Query: 1 PPGAPIRVEKNLRICLDCHTAFKYICKIVSREIIIRDINRFHHFRDGSCSCGDYW 165
PPGAPIRV+KNLRIC DCH AFK+I IVSREIIIRDINRFHHFRDG+CSCGDYW
Sbjct: 823 PPGAPIRVKKNLRICRDCHMAFKFISNIVSREIIIRDINRFHHFRDGTCSCGDYW 877
>gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 111 bits (277), Expect = 1e-22
Identities = 48/55 (87%), Positives = 51/55 (92%)
Frame = +1
Query: 1 PPGAPIRVEKNLRICLDCHTAFKYICKIVSREIIIRDINRFHHFRDGSCSCGDYW 165
PPGAPIRV+KNLRIC DCH AFK+I IVSREIIIRDINRFHHFRDG+CSCGDYW
Sbjct: 730 PPGAPIRVKKNLRICRDCHMAFKFISNIVSREIIIRDINRFHHFRDGTCSCGDYW 784
>gb|EEC84168.1| hypothetical protein OsI_30545 [Oryza sativa Indica Group]
Length = 503
Score = 111 bits (277), Expect = 1e-22
Identities = 48/55 (87%), Positives = 51/55 (92%)
Frame = +1
Query: 1 PPGAPIRVEKNLRICLDCHTAFKYICKIVSREIIIRDINRFHHFRDGSCSCGDYW 165
PPGAPIRV+KNLRIC DCH AFK+I IVSREIIIRDINRFHHFRDG+CSCGDYW
Sbjct: 449 PPGAPIRVKKNLRICRDCHMAFKFISNIVSREIIIRDINRFHHFRDGTCSCGDYW 503
>ref|XP_004952954.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Setaria italica]
Length = 883
Score = 110 bits (275), Expect = 2e-22
Identities = 48/55 (87%), Positives = 51/55 (92%)
Frame = +1
Query: 1 PPGAPIRVEKNLRICLDCHTAFKYICKIVSREIIIRDINRFHHFRDGSCSCGDYW 165
P GAPIRV+KNLRIC DCH AFK+I KIVSREIIIRDINRFHHFRDG+CSCGDYW
Sbjct: 829 PAGAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRDINRFHHFRDGTCSCGDYW 883
>ref|XP_002305120.2| hypothetical protein POPTR_0004s04740g [Populus trichocarpa]
gi|550340337|gb|EEE85631.2| hypothetical protein
POPTR_0004s04740g [Populus trichocarpa]
Length = 858
Score = 109 bits (273), Expect = 3e-22
Identities = 46/55 (83%), Positives = 50/55 (90%)
Frame = +1
Query: 1 PPGAPIRVEKNLRICLDCHTAFKYICKIVSREIIIRDINRFHHFRDGSCSCGDYW 165
PPGAPIRV+KNLRIC DCHT K+I KIVSREII+RD NRFHHFRDGSCSCG+YW
Sbjct: 804 PPGAPIRVKKNLRICFDCHTVLKFISKIVSREIIVRDTNRFHHFRDGSCSCGEYW 858