BLASTX nr result
ID: Rehmannia23_contig00023430
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00023430
(882 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB08714.1| non-LTR retroelement reverse transcriptase-like ... 54 4e-08
ref|XP_006404675.1| hypothetical protein EUTSA_v10000670mg [Eutr... 52 2e-07
gb|AAD24601.1| putative non-LTR retroelement reverse transcripta... 51 4e-07
gb|EOY00433.1| Uncharacterized protein TCM_010295 [Theobroma cacao] 52 4e-07
pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW1... 61 6e-07
gb|AAD17395.1| putative non-LTR retroelement reverse transcripta... 59 2e-06
gb|ACP30591.1| disease resistance protein [Brassica rapa subsp. ... 55 2e-06
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-... 47 3e-06
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga... 57 7e-06
>dbj|BAB08714.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 1197
Score = 53.9 bits (128), Expect(2) = 4e-08
Identities = 26/56 (46%), Positives = 33/56 (58%)
Frame = -2
Query: 791 FIWRAILDVLTVKGQLLKRGMKVDTICSWCGEKAETVEHVLFHCCRAQRVWKLAPV 624
F+W+A+ L V QL R D +C CGE ET H LF+C QRVW+LAP+
Sbjct: 885 FLWKAVSGALPVGSQLAIRIPSFDPVCCRCGE-LETSSHALFNCMFVQRVWRLAPL 939
Score = 30.8 bits (68), Expect(2) = 4e-08
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Frame = -1
Query: 525 SLNKYL*W-LWKTRNM*IFNGTKVSEMEVVKLA---CKEWEEFEEAN 397
+L ++ W LW TRN +F+ SE+E + A KEW+ +E N
Sbjct: 973 ALYPWICWTLWITRNQKVFSNILFSELETINKAIQDAKEWQFAQEPN 1019
>ref|XP_006404675.1| hypothetical protein EUTSA_v10000670mg [Eutrema salsugineum]
gi|557105803|gb|ESQ46128.1| hypothetical protein
EUTSA_v10000670mg [Eutrema salsugineum]
Length = 226
Score = 51.6 bits (122), Expect(2) = 2e-07
Identities = 24/55 (43%), Positives = 38/55 (69%)
Frame = -2
Query: 788 IWRAILDVLTVKGQLLKRGMKVDTICSWCGEKAETVEHVLFHCCRAQRVWKLAPV 624
+WRA +D L V+ +L++R ++VD C CG +T+ HVL +C A++VW LAP+
Sbjct: 8 LWRAAVDALPVRVELVRRRIQVDFGCKICG-NPKTITHVLKNCQFARKVWDLAPL 61
Score = 30.8 bits (68), Expect(2) = 2e-07
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = -1
Query: 525 SLNKYL*W-LWKTRNM*IFNGTKVSEMEVVKLACKEWEEFEEAN*GLLML 379
SL ++ W LW TRN IF+ T S EV+ A +E ++EA L L
Sbjct: 94 SLPVWICWNLWTTRNHQIFSNTTYSAGEVITKALEEANAWQEAQTSLQKL 143
>gb|AAD24601.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1319
Score = 51.2 bits (121), Expect(2) = 4e-07
Identities = 21/54 (38%), Positives = 35/54 (64%)
Frame = -2
Query: 791 FIWRAILDVLTVKGQLLKRGMKVDTICSWCGEKAETVEHVLFHCCRAQRVWKLA 630
F+W+A+ L V+ +L RG++ C +C E+ ET+ H+LF C A++VW L+
Sbjct: 1010 FMWKALKGALAVEDRLRSRGIRTADGCLFCKEEIETINHLLFQCPFARQVWALS 1063
Score = 30.0 bits (66), Expect(2) = 4e-07
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Frame = -1
Query: 528 QSLNKYL*W-LWKTRNM*IFNGTKVSEMEVVKLA---CKEWEEFEEAN*G 391
++++ +L W +WK RN +F GT ++ E+V A C W +E + G
Sbjct: 1097 RTVSPWLLWEIWKNRNKTLFQGTGLTSSEIVAKAYEECNLWINAQEKSSG 1146
>gb|EOY00433.1| Uncharacterized protein TCM_010295 [Theobroma cacao]
Length = 290
Score = 52.0 bits (123), Expect(2) = 4e-07
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Frame = -2
Query: 791 FIWRAILDVLTVKGQLLKRGMKVDTICSWCGEKAETVEHVLFHCCRAQRVWKLAPVGWDG 612
F+W+ I D+L + +L+KRG+ ++ +C C + ET H L +C ++ VW G+
Sbjct: 77 FMWKVIHDILPTRSELIKRGVNIELMCPLCEIEVETAFHCLCNCQFSRLVWLTTKCGFRD 136
Query: 611 I--FHDKL 594
I FHD +
Sbjct: 137 ISNFHDSI 144
Score = 29.3 bits (64), Expect(2) = 4e-07
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = -1
Query: 501 LWKTRNM*IFNGTKVSEMEVVKLACKEWEEFEEAN 397
+WKTRN+ +FN ++ + M VV++ +F A+
Sbjct: 170 IWKTRNVVVFNQSRSTPMVVVEIGLDLIHQFRRAS 204
>pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW15) - Arabidopsis
thaliana retrotransposon Ta11-1 gi|976278|gb|AAA75254.1|
reverse transcriptase [Arabidopsis thaliana]
Length = 1333
Score = 60.8 bits (146), Expect = 6e-07
Identities = 25/56 (44%), Positives = 37/56 (66%)
Frame = -2
Query: 791 FIWRAILDVLTVKGQLLKRGMKVDTICSWCGEKAETVEHVLFHCCRAQRVWKLAPV 624
F+WR + L V Q+++RGM +D C CGE+ E++ HVLF C A++VW L+ V
Sbjct: 1060 FLWRILSSALPVAYQIIRRGMPIDPRCQVCGEEGESINHVLFTCSLARQVWALSGV 1115
>gb|AAD17395.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1138
Score = 59.3 bits (142), Expect = 2e-06
Identities = 24/56 (42%), Positives = 36/56 (64%)
Frame = -2
Query: 791 FIWRAILDVLTVKGQLLKRGMKVDTICSWCGEKAETVEHVLFHCCRAQRVWKLAPV 624
F+WR + L V Q+++RGM +D C CG++ E+ HVLF C A++VW L+ V
Sbjct: 834 FLWRILSAALPVADQIIRRGMSIDPRCQICGDEGESTNHVLFTCSMARQVWALSGV 889
>gb|ACP30591.1| disease resistance protein [Brassica rapa subsp. pekinensis]
Length = 1555
Score = 55.5 bits (132), Expect(2) = 2e-06
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 9/92 (9%)
Frame = -2
Query: 791 FIWRAILDVLTVKGQLLKRGMKVDTICSWCGEKAETVEHVLFHCCRAQRVWKLAPVGWDG 612
F+W+ + + V +LL+R + +D C CG E++ H+LFHC AQRVW LAP+
Sbjct: 1263 FVWKVLKGAVPVGERLLERHIDIDPRCKRCGSN-ESITHLLFHCQFAQRVWHLAPLATAP 1321
Query: 611 IFHDKLTVKNWWNEICTM---------NGNLV 543
F + + W + + +GNLV
Sbjct: 1322 DFRGMIDLMADWPALSNLKALPPTGIASGNLV 1353
Score = 23.5 bits (49), Expect(2) = 2e-06
Identities = 10/31 (32%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
Frame = -1
Query: 501 LWKTRNM*IFNGTKVSEMEVVKLA---CKEW 418
+WK RN +F G S + + A +EW
Sbjct: 1360 IWKARNRFVFEGVSASPEDTLSSAIRLAREW 1390
>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
Length = 1142
Score = 47.0 bits (110), Expect(2) = 3e-06
Identities = 19/56 (33%), Positives = 31/56 (55%)
Frame = -2
Query: 791 FIWRAILDVLTVKGQLLKRGMKVDTICSWCGEKAETVEHVLFHCCRAQRVWKLAPV 624
F+W+ + + V L KRG+ D C CG E++ H LF C A+++W L+ +
Sbjct: 840 FLWQILSGCVPVSENLRKRGILCDKGCVSCGASEESINHTLFQCHPARQIWALSQI 895
Score = 31.6 bits (70), Expect(2) = 3e-06
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -1
Query: 504 WLWKTRNM*IFNGTKVSEMEVVKLACKEWEEFEEA 400
++WK RN +F ME++ LA KE + ++EA
Sbjct: 933 YIWKARNEKVFENVDKDPMEILLLAVKEAQSWQEA 967
>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1369
Score = 57.4 bits (137), Expect = 7e-06
Identities = 24/56 (42%), Positives = 35/56 (62%)
Frame = -2
Query: 791 FIWRAILDVLTVKGQLLKRGMKVDTICSWCGEKAETVEHVLFHCCRAQRVWKLAPV 624
F W+AI + L V + KRGM +D C CGEK ET EH+++ C + R W ++P+
Sbjct: 1066 FSWKAIHNGLAVYTNMRKRGMNIDGACPRCGEKEETTEHLIWGCDESSRAWYISPL 1121