BLASTX nr result

ID: Rehmannia23_contig00023270 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00023270
         (407 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514905.1| LIGULELESS1 protein, putative [Ricinus commu...    60   3e-07
ref|XP_006352180.1| PREDICTED: squamosa promoter-binding-like pr...    59   7e-07

>ref|XP_002514905.1| LIGULELESS1 protein, putative [Ricinus communis]
           gi|223545956|gb|EEF47459.1| LIGULELESS1 protein,
           putative [Ricinus communis]
          Length = 483

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 29/63 (46%), Positives = 43/63 (68%), Gaps = 5/63 (7%)
 Frame = -3

Query: 405 QPMIHAIPEGVPL-SSDFWLGGQHSTHPHLQSLAT----NSNFQEIQLFKTPYEADFYSN 241
           Q ++HA+P+G+PL SSD+W   QH T+  + +L +    +S FQE QL + PY+ DFYS+
Sbjct: 421 QSVLHAVPQGLPLTSSDYWRAEQHITNSRVHTLTSQNDSSSYFQEFQLLRAPYDNDFYSS 480

Query: 240 ILN 232
            LN
Sbjct: 481 QLN 483


>ref|XP_006352180.1| PREDICTED: squamosa promoter-binding-like protein 12-like isoform
           X1 [Solanum tuberosum] gi|565371167|ref|XP_006352181.1|
           PREDICTED: squamosa promoter-binding-like protein
           12-like isoform X2 [Solanum tuberosum]
           gi|565371169|ref|XP_006352182.1| PREDICTED: squamosa
           promoter-binding-like protein 12-like isoform X3
           [Solanum tuberosum]
          Length = 465

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 31/64 (48%), Positives = 42/64 (65%), Gaps = 6/64 (9%)
 Frame = -3

Query: 405 QPMIHAIPEGVP-LSSDFWL-GGQHSTHPHLQSLATNSN----FQEIQLFKTPYEADFYS 244
           + M+ AIP+GVP +SS +W   GQHS+     +LA NSN    FQE+ +FK P++ DFY 
Sbjct: 402 EQMMQAIPQGVPHMSSQYWQQAGQHSSDTRYHTLAANSNSGGSFQEMGVFKAPFDTDFYL 461

Query: 243 NILN 232
           N LN
Sbjct: 462 NALN 465


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