BLASTX nr result

ID: Rehmannia23_contig00023159 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00023159
         (339 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300592.2| hypothetical protein POPTR_0001s47630g [Popu...    58   1e-06

>ref|XP_002300592.2| hypothetical protein POPTR_0001s47630g [Populus trichocarpa]
            gi|550350098|gb|EEE85397.2| hypothetical protein
            POPTR_0001s47630g [Populus trichocarpa]
          Length = 1480

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 41/127 (32%), Positives = 60/127 (47%), Gaps = 18/127 (14%)
 Frame = +3

Query: 3    EIIVIDDSPEHEASLAFKTT-YRENMESRALG-----------YDSRHANPFFSYQTRCY 146
            EII+IDD PE +  +    T Y E    R              Y+  + NPF  YQ++ +
Sbjct: 1355 EIIIIDDVPESQTVVISDITRYNEGWRERQAVPSGISVPTIPVYNMSNVNPFTCYQSQDH 1414

Query: 147  PFYSGSQVVQNN------ANPSNGNLVDWNRATEGRPSVLHRNSLTAASPSSGHDQKSPM 308
            P   G+ ++ N           N + V W   +EG PSVL +N   AAS SSGH + + +
Sbjct: 1415 PPLGGTPLLHNGNFHATATRLVNTSPVRWGCPSEG-PSVLQQNPFVAASNSSGHPRSASL 1473

Query: 309  FFSSGFS 329
            ++S  FS
Sbjct: 1474 YYSPSFS 1480


Top