BLASTX nr result
ID: Rehmannia23_contig00023141
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00023141
(395 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS63217.1| hypothetical protein M569_11569 [Genlisea aurea] 90 3e-16
ref|XP_002301563.2| hypothetical protein POPTR_0002s22630g, part... 88 1e-15
ref|XP_002512787.1| pentatricopeptide repeat-containing protein,... 84 3e-14
ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226... 81 2e-13
ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212... 81 2e-13
ref|NP_189297.1| pentatricopeptide repeat-containing protein [Ar... 81 2e-13
ref|XP_002876985.1| pentatricopeptide repeat-containing protein ... 81 2e-13
ref|XP_006395538.1| hypothetical protein EUTSA_v10004197mg [Eutr... 80 4e-13
ref|XP_003548483.1| PREDICTED: pentatricopeptide repeat-containi... 80 4e-13
gb|ESW33780.1| hypothetical protein PHAVU_001G097900g [Phaseolus... 79 5e-13
ref|XP_003553320.1| PREDICTED: pentatricopeptide repeat-containi... 78 1e-12
ref|XP_003624556.1| Pentatricopeptide repeat-containing protein ... 77 2e-12
ref|XP_006844721.1| hypothetical protein AMTR_s00016p00252780 [A... 77 3e-12
ref|XP_006468953.1| PREDICTED: pentatricopeptide repeat-containi... 76 5e-12
ref|XP_006291116.1| hypothetical protein CARUB_v10017228mg [Caps... 76 5e-12
gb|EXB41428.1| hypothetical protein L484_007578 [Morus notabilis] 75 7e-12
ref|XP_006446854.1| hypothetical protein CICLE_v10018065mg [Citr... 75 1e-11
gb|EMJ05156.1| hypothetical protein PRUPE_ppa022872mg [Prunus pe... 66 4e-09
gb|EXB61171.1| hypothetical protein L484_007437 [Morus notabilis] 63 4e-08
ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containi... 63 4e-08
>gb|EPS63217.1| hypothetical protein M569_11569 [Genlisea aurea]
Length = 417
Score = 90.1 bits (222), Expect = 3e-16
Identities = 44/83 (53%), Positives = 67/83 (80%), Gaps = 2/83 (2%)
Frame = +2
Query: 152 LPARNFHTISRPSFTSQDALIFLQKCSSFKQLKQIHAKIVRNSL--HQHQVIVAGLIRVC 325
L +RNF + P+F+S +AL+ L +C+SF Q+KQIH +I+R+ L HQ+Q+IVA LIR+C
Sbjct: 18 LRSRNFPS---PNFSSSEALLCLHRCTSFNQMKQIHGRIIRSGLQQHQNQLIVARLIRLC 74
Query: 326 SSYGELDYATLVFQQIENPSTFA 394
SS+G+LDYA LV ++IE+P++F+
Sbjct: 75 SSFGKLDYAYLVLERIEDPTSFS 97
>ref|XP_002301563.2| hypothetical protein POPTR_0002s22630g, partial [Populus
trichocarpa] gi|550345613|gb|EEE80836.2| hypothetical
protein POPTR_0002s22630g, partial [Populus trichocarpa]
Length = 245
Score = 88.2 bits (217), Expect = 1e-15
Identities = 48/104 (46%), Positives = 63/104 (60%), Gaps = 12/104 (11%)
Frame = +2
Query: 116 MIACFSLNTLDVL--------PARN--FHTISR--PSFTSQDALIFLQKCSSFKQLKQIH 259
M+AC S D L P N +HT S P F S +AL+ LQ C+SF LK +H
Sbjct: 1 MVACLSSTLPDALIISSRRRSPFLNSHYHTSSTCWPKFGSAEALLLLQNCTSFNHLKLVH 60
Query: 260 AKIVRNSLHQHQVIVAGLIRVCSSYGELDYATLVFQQIENPSTF 391
KI+RN+L +Q++V LI +CSSYG LDYA L+F Q++ P TF
Sbjct: 61 GKIIRNALSANQLLVRKLIHLCSSYGRLDYAALLFHQVQEPHTF 104
>ref|XP_002512787.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223547798|gb|EEF49290.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 480
Score = 83.6 bits (205), Expect = 3e-14
Identities = 44/96 (45%), Positives = 62/96 (64%), Gaps = 4/96 (4%)
Frame = +2
Query: 116 MIACFSLNTLDVLPARNFHTIS----RPSFTSQDALIFLQKCSSFKQLKQIHAKIVRNSL 283
M+AC S + N HT + +P F SQ+AL LQK S+F +K + AKI+RN+L
Sbjct: 1 MVACLSSAPVKNARFLNSHTHNHSNNKPKFGSQEALNLLQKGSNFTHVKLVQAKIIRNNL 60
Query: 284 HQHQVIVAGLIRVCSSYGELDYATLVFQQIENPSTF 391
Q++V L+R+C SY ++DYATL+F QI+NP TF
Sbjct: 61 SDDQLLVRKLLRLCFSYQKVDYATLIFDQIQNPHTF 96
>ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 80.9 bits (198), Expect = 2e-13
Identities = 40/92 (43%), Positives = 58/92 (63%)
Frame = +2
Query: 116 MIACFSLNTLDVLPARNFHTISRPSFTSQDALIFLQKCSSFKQLKQIHAKIVRNSLHQHQ 295
M+ C S T DV P++N R + ++ AL LQ C +FK L+QIHAKI+R+ L Q
Sbjct: 1 MVPCLSY-THDVFPSKNIPLTPRGNIRAKKALFLLQNCKNFKHLRQIHAKIIRSGLSNDQ 59
Query: 296 VIVAGLIRVCSSYGELDYATLVFQQIENPSTF 391
++ LI + S++G + YA L+F QI+NP TF
Sbjct: 60 LLTRKLIHLYSTHGRIAYAILLFYQIQNPCTF 91
>ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 80.9 bits (198), Expect = 2e-13
Identities = 40/92 (43%), Positives = 58/92 (63%)
Frame = +2
Query: 116 MIACFSLNTLDVLPARNFHTISRPSFTSQDALIFLQKCSSFKQLKQIHAKIVRNSLHQHQ 295
M+ C S T DV P++N R + ++ AL LQ C +FK L+QIHAKI+R+ L Q
Sbjct: 1 MVPCLSY-THDVFPSKNIPLTPRGNIRAKKALFLLQNCKNFKHLRQIHAKIIRSGLSNDQ 59
Query: 296 VIVAGLIRVCSSYGELDYATLVFQQIENPSTF 391
++ LI + S++G + YA L+F QI+NP TF
Sbjct: 60 LLTRKLIHLYSTHGRIAYAILLFYQIQNPCTF 91
>ref|NP_189297.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75275188|sp|Q38959.1|PP257_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g26630, chloroplastic; Flags: Precursor
gi|1402883|emb|CAA66814.1| hypothetical protein
[Arabidopsis thaliana] gi|1495263|emb|CAA66119.1| orf09
[Arabidopsis thaliana] gi|11994298|dbj|BAB01728.1|
unnamed protein product [Arabidopsis thaliana]
gi|20466384|gb|AAM20509.1| unknown protein [Arabidopsis
thaliana] gi|23198064|gb|AAN15559.1| unknown protein
[Arabidopsis thaliana] gi|332643668|gb|AEE77189.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 455
Score = 80.9 bits (198), Expect = 2e-13
Identities = 39/79 (49%), Positives = 56/79 (70%)
Frame = +2
Query: 155 PARNFHTISRPSFTSQDALIFLQKCSSFKQLKQIHAKIVRNSLHQHQVIVAGLIRVCSSY 334
P+ + +S P F S +A FL+ CS+F QLKQIH KI++++L Q++V LI V SS+
Sbjct: 6 PSSPPNLLSPPPFRSPEASYFLRTCSNFSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSF 65
Query: 335 GELDYATLVFQQIENPSTF 391
GE YA+LVF Q+++PSTF
Sbjct: 66 GETQYASLVFNQLQSPSTF 84
>ref|XP_002876985.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297322823|gb|EFH53244.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 451
Score = 80.9 bits (198), Expect = 2e-13
Identities = 39/79 (49%), Positives = 56/79 (70%)
Frame = +2
Query: 155 PARNFHTISRPSFTSQDALIFLQKCSSFKQLKQIHAKIVRNSLHQHQVIVAGLIRVCSSY 334
P+ + +S P F S +A FL+ CS+F QLKQIH KI++++L Q++V LI V SS+
Sbjct: 6 PSSPPNLLSPPPFRSPEASYFLRTCSNFSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSF 65
Query: 335 GELDYATLVFQQIENPSTF 391
GE YA+LVF Q+++PSTF
Sbjct: 66 GETQYASLVFNQLQSPSTF 84
>ref|XP_006395538.1| hypothetical protein EUTSA_v10004197mg [Eutrema salsugineum]
gi|557092177|gb|ESQ32824.1| hypothetical protein
EUTSA_v10004197mg [Eutrema salsugineum]
Length = 453
Score = 79.7 bits (195), Expect = 4e-13
Identities = 40/72 (55%), Positives = 51/72 (70%)
Frame = +2
Query: 176 ISRPSFTSQDALIFLQKCSSFKQLKQIHAKIVRNSLHQHQVIVAGLIRVCSSYGELDYAT 355
+S P F S A FL+ CS+F QLKQIHAKI+R +L Q++V LI V SS GE YA+
Sbjct: 13 LSPPHFRSDKASFFLRNCSNFSQLKQIHAKIIRYNLTNDQLLVRQLISVSSSLGETRYAS 72
Query: 356 LVFQQIENPSTF 391
LVF Q+++PSTF
Sbjct: 73 LVFSQLQSPSTF 84
>ref|XP_003548483.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26630,
chloroplastic-like isoform X1 [Glycine max]
gi|571525647|ref|XP_006598987.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g26630,
chloroplastic-like isoform X2 [Glycine max]
Length = 483
Score = 79.7 bits (195), Expect = 4e-13
Identities = 37/70 (52%), Positives = 51/70 (72%)
Frame = +2
Query: 182 RPSFTSQDALIFLQKCSSFKQLKQIHAKIVRNSLHQHQVIVAGLIRVCSSYGELDYATLV 361
R F S++AL+ LQKCS+FKQLKQ+H KI+R L Q+++ LI++ SSYG++ YATLV
Sbjct: 20 RTRFGSEEALVLLQKCSNFKQLKQVHGKIIRFGLTYDQLLMRKLIQLSSSYGKMKYATLV 79
Query: 362 FQQIENPSTF 391
F Q+ P F
Sbjct: 80 FDQLNAPDVF 89
>gb|ESW33780.1| hypothetical protein PHAVU_001G097900g [Phaseolus vulgaris]
Length = 482
Score = 79.3 bits (194), Expect = 5e-13
Identities = 37/70 (52%), Positives = 52/70 (74%)
Frame = +2
Query: 182 RPSFTSQDALIFLQKCSSFKQLKQIHAKIVRNSLHQHQVIVAGLIRVCSSYGELDYATLV 361
R F S++A + LQKCS+FKQLKQ+H +I+R L Q+++ LI++ SSYG+L+YATLV
Sbjct: 19 RTRFGSEEAHLILQKCSNFKQLKQVHGRIIRFGLIYDQLLMRNLIQLSSSYGKLNYATLV 78
Query: 362 FQQIENPSTF 391
F Q+ P TF
Sbjct: 79 FDQLNAPDTF 88
>ref|XP_003553320.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26630,
chloroplastic-like [Glycine max]
Length = 474
Score = 77.8 bits (190), Expect = 1e-12
Identities = 36/70 (51%), Positives = 50/70 (71%)
Frame = +2
Query: 182 RPSFTSQDALIFLQKCSSFKQLKQIHAKIVRNSLHQHQVIVAGLIRVCSSYGELDYATLV 361
R F S++AL+ L+KCS+FKQLKQ+H KI+R L Q++V LI++ SYG++ YATLV
Sbjct: 19 RTRFGSEEALVLLKKCSNFKQLKQVHGKIIRYGLTYDQLLVRKLIQLSPSYGKMKYATLV 78
Query: 362 FQQIENPSTF 391
F Q+ P F
Sbjct: 79 FDQLNAPDVF 88
>ref|XP_003624556.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499571|gb|AES80774.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 476
Score = 77.4 bits (189), Expect = 2e-12
Identities = 34/67 (50%), Positives = 51/67 (76%)
Frame = +2
Query: 191 FTSQDALIFLQKCSSFKQLKQIHAKIVRNSLHQHQVIVAGLIRVCSSYGELDYATLVFQQ 370
F S++A +FLQ C++FKQLKQIHA+I+R L Q+++ L ++ SSYG++DYA+LVF Q
Sbjct: 18 FGSEEARLFLQNCNNFKQLKQIHARIIRFRLTHDQLLIRKLCQISSSYGKIDYASLVFDQ 77
Query: 371 IENPSTF 391
+ +P F
Sbjct: 78 LNDPDIF 84
>ref|XP_006844721.1| hypothetical protein AMTR_s00016p00252780 [Amborella trichopoda]
gi|548847192|gb|ERN06396.1| hypothetical protein
AMTR_s00016p00252780 [Amborella trichopoda]
Length = 428
Score = 76.6 bits (187), Expect = 3e-12
Identities = 36/71 (50%), Positives = 48/71 (67%)
Frame = +2
Query: 179 SRPSFTSQDALIFLQKCSSFKQLKQIHAKIVRNSLHQHQVIVAGLIRVCSSYGELDYATL 358
S PSF+ AL LQKCS+ L QIHA + R LH+ +++ LI +CS + ++D+ATL
Sbjct: 25 SNPSFSHYQALSLLQKCSTSNHLLQIHAHLFRTGLHRDYILITKLINLCSIHQKIDHATL 84
Query: 359 VFQQIENPSTF 391
VF QIENP TF
Sbjct: 85 VFNQIENPLTF 95
>ref|XP_006468953.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26630,
chloroplastic-like isoform X1 [Citrus sinensis]
gi|568829286|ref|XP_006468954.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g26630,
chloroplastic-like isoform X2 [Citrus sinensis]
gi|568829288|ref|XP_006468955.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g26630,
chloroplastic-like isoform X3 [Citrus sinensis]
Length = 435
Score = 75.9 bits (185), Expect = 5e-12
Identities = 44/96 (45%), Positives = 61/96 (63%), Gaps = 4/96 (4%)
Frame = +2
Query: 116 MIACFSLNTLDVL----PARNFHTISRPSFTSQDALIFLQKCSSFKQLKQIHAKIVRNSL 283
M+ C S T D+L P N +I+R F Q+AL+ L+KC +F QLK IHAKI+R+ L
Sbjct: 1 MVVCLSY-TPDLLTHKTPLLN-SSITRLKFGYQEALVLLRKCRNFGQLKLIHAKIIRHGL 58
Query: 284 HQHQVIVAGLIRVCSSYGELDYATLVFQQIENPSTF 391
Q++V L+ +CS YG+ D+A LVF QI+ P F
Sbjct: 59 SNDQLLVRKLLDLCSFYGKTDHALLVFSQIQCPHVF 94
>ref|XP_006291116.1| hypothetical protein CARUB_v10017228mg [Capsella rubella]
gi|482559823|gb|EOA24014.1| hypothetical protein
CARUB_v10017228mg [Capsella rubella]
Length = 454
Score = 75.9 bits (185), Expect = 5e-12
Identities = 37/79 (46%), Positives = 54/79 (68%)
Frame = +2
Query: 155 PARNFHTISRPSFTSQDALIFLQKCSSFKQLKQIHAKIVRNSLHQHQVIVAGLIRVCSSY 334
P+ + +S P F S +A L+ C SF QLKQIH +I++++L Q++V LI V SS+
Sbjct: 6 PSSPPNLLSPPPFRSPEASYLLRTCLSFSQLKQIHTRIIKHNLTNDQLLVRQLISVSSSF 65
Query: 335 GELDYATLVFQQIENPSTF 391
GE YA+LVF Q+++PSTF
Sbjct: 66 GETKYASLVFNQLQSPSTF 84
>gb|EXB41428.1| hypothetical protein L484_007578 [Morus notabilis]
Length = 428
Score = 75.5 bits (184), Expect = 7e-12
Identities = 36/72 (50%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
Frame = +2
Query: 179 SRPSFTSQDALIFLQKCSSFKQLKQIHAKIVRNSLHQHQVIVAGLIRVCSSYGELDYATL 358
S+ F S++A FLQ C+SF+QLKQIHAKI+R+ L Q+++ +++ CS+ G +DYA L
Sbjct: 16 SKTKFGSEEAFTFLQNCTSFRQLKQIHAKIIRSGLSHDQLLLRKMLQFCSTSGNMDYAAL 75
Query: 359 VFQ-QIENPSTF 391
VF+ QI P TF
Sbjct: 76 VFRHQIPYPLTF 87
>ref|XP_006446854.1| hypothetical protein CICLE_v10018065mg [Citrus clementina]
gi|557549465|gb|ESR60094.1| hypothetical protein
CICLE_v10018065mg [Citrus clementina]
Length = 438
Score = 74.7 bits (182), Expect = 1e-11
Identities = 36/73 (49%), Positives = 51/73 (69%)
Frame = +2
Query: 173 TISRPSFTSQDALIFLQKCSSFKQLKQIHAKIVRNSLHQHQVIVAGLIRVCSSYGELDYA 352
+I+R F Q+AL+ L+KC +F QLK IHAKI+R+ L Q++V L+ +CS YG+ D+A
Sbjct: 22 SITRLKFGYQEALVLLRKCRNFGQLKLIHAKIIRHGLSNDQLLVRKLLDLCSFYGKTDHA 81
Query: 353 TLVFQQIENPSTF 391
LVF QI+ P F
Sbjct: 82 LLVFSQIQCPHVF 94
>gb|EMJ05156.1| hypothetical protein PRUPE_ppa022872mg [Prunus persica]
Length = 714
Score = 66.2 bits (160), Expect = 4e-09
Identities = 38/92 (41%), Positives = 55/92 (59%), Gaps = 7/92 (7%)
Frame = +2
Query: 131 SLNTLDVLPARNFHTI--SRPSFT---SQDALIFLQKCSSFKQLKQIHAKIVRNSLHQHQ 295
SL +L +LP+ FH + S P + +Q +L L KC S + LKQ+HA I++ LH
Sbjct: 7 SLLSLPILPS-TFHVLPTSDPPYKLLQTQPSLTLLSKCKSMQNLKQVHAHIIKTGLHNTH 65
Query: 296 VIVAGLIRVC--SSYGELDYATLVFQQIENPS 385
++ L+ C S +G+L YA LVFQ IENP+
Sbjct: 66 FALSKLVEFCAISPFGDLSYALLVFQSIENPN 97
>gb|EXB61171.1| hypothetical protein L484_007437 [Morus notabilis]
Length = 631
Score = 63.2 bits (152), Expect = 4e-08
Identities = 29/77 (37%), Positives = 44/77 (57%)
Frame = +2
Query: 161 RNFHTISRPSFTSQDALIFLQKCSSFKQLKQIHAKIVRNSLHQHQVIVAGLIRVCSSYGE 340
RN S S ++ + LQKC ++ HAKI+RN Q IV L+R+CS+
Sbjct: 16 RNSKPKSNNSTNRKEVIFLLQKCKHISHVQSTHAKIIRNGQEQDPFIVFELLRLCSNLNS 75
Query: 341 LDYATLVFQQIENPSTF 391
+DYA+ +FQ+I+ P+ F
Sbjct: 76 IDYASKIFQRIQTPNVF 92
>ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 63.2 bits (152), Expect = 4e-08
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Frame = +2
Query: 119 IACFSLNTLDVLPARNFHTISRPSFT---SQDALIFLQKCSSFKQLKQIHAKIVRNSLHQ 289
+A FS + + P +F S P + + +L L C SF+ LKQIH++I++ LH
Sbjct: 3 LASFSPSLVMPPPTLHFQPTSDPPYKLLQNHPSLTLLSTCKSFQNLKQIHSQIIKTGLHN 62
Query: 290 HQVIVAGLIRVC--SSYGELDYATLVFQQIENPSTF 391
Q ++ LI C S +G L YA L+F+ IE P+ F
Sbjct: 63 TQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQF 98