BLASTX nr result
ID: Rehmannia23_contig00023111
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00023111
(792 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containi... 317 2e-84
gb|EXB82495.1| hypothetical protein L484_027670 [Morus notabilis] 301 2e-79
ref|XP_003531325.2| PREDICTED: pentatricopeptide repeat-containi... 300 4e-79
gb|EOY00680.1| Pentatricopeptide repeat superfamily protein isof... 297 2e-78
gb|EMJ28460.1| hypothetical protein PRUPE_ppa017811mg [Prunus pe... 296 4e-78
ref|XP_004310156.1| PREDICTED: pentatricopeptide repeat-containi... 296 5e-78
ref|XP_004240634.1| PREDICTED: pentatricopeptide repeat-containi... 295 1e-77
ref|XP_002530052.1| pentatricopeptide repeat-containing protein,... 293 5e-77
ref|XP_006364563.1| PREDICTED: pentatricopeptide repeat-containi... 293 6e-77
ref|XP_004504137.1| PREDICTED: pentatricopeptide repeat-containi... 288 1e-75
gb|ESW31683.1| hypothetical protein PHAVU_002G258900g [Phaseolus... 286 4e-75
ref|XP_006483972.1| PREDICTED: pentatricopeptide repeat-containi... 282 8e-74
ref|XP_006438222.1| hypothetical protein CICLE_v10031251mg [Citr... 282 8e-74
ref|XP_004135492.1| PREDICTED: pentatricopeptide repeat-containi... 279 9e-73
ref|XP_002312667.1| pentatricopeptide repeat-containing family p... 278 1e-72
ref|XP_006417164.1| hypothetical protein EUTSA_v10007381mg [Eutr... 255 1e-65
ref|XP_006836595.1| hypothetical protein AMTR_s00131p00098210 [A... 254 2e-65
gb|EPS65318.1| hypothetical protein M569_09460 [Genlisea aurea] 254 2e-65
ref|XP_006304861.1| hypothetical protein CARUB_v10012598mg [Caps... 249 8e-64
ref|NP_172763.1| pentatricopeptide repeat-containing protein [Ar... 248 2e-63
>ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial [Vitis vinifera]
gi|296081374|emb|CBI16807.3| unnamed protein product
[Vitis vinifera]
Length = 519
Score = 317 bits (813), Expect = 2e-84
Identities = 158/246 (64%), Positives = 188/246 (76%)
Frame = +2
Query: 2 LGEGEKLLAKMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNT 181
L E E L+ KMERSG+EPD YSYNE+LKGLCK NR++KAYM++VNKMEAK + DVVSYNT
Sbjct: 270 LEEAENLMKKMERSGVEPDVYSYNELLKGLCKANRLDKAYMMMVNKMEAKGLCDVVSYNT 329
Query: 182 IINAFCKAGRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTS 361
II A C A T++AYKL EMG KGI PDVVTFTILI AFL+EG+S +AK LLDQMT
Sbjct: 330 IIKALCTASHTKRAYKLFEEMGGKGITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLG 389
Query: 362 LFPSLALYTTIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEAL 541
L P LYTTI+DHLCK G++ MAHS+F D+VE I PDVV+YNALI+G C A +V+EA+
Sbjct: 390 LLPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVESGITPDVVSYNALINGLCRASRVSEAM 449
Query: 542 HLFEEMQTKGVYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETLIKAI 721
HL+E+M T G PDEVTF S+AC VWDQMMEKGFTLD +SETL+ AI
Sbjct: 450 HLYEDMHTGGPCPDEVTFKLIIGGLIWEKKLSVACRVWDQMMEKGFTLDGAVSETLVNAI 509
Query: 722 NSKEAS 739
+S +AS
Sbjct: 510 HSNDAS 515
Score = 127 bits (318), Expect = 6e-27
Identities = 79/246 (32%), Positives = 121/246 (49%)
Frame = +2
Query: 32 MERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTIINAFCKAGR 211
M R G PD + ++ GLC +V+ AY L V M + YN++IN FC+AG
Sbjct: 175 MVRKGFSPDEKACRALVLGLCHDGKVDLAYELTVGAMRGRIKFSKSIYNSLINGFCQAGW 234
Query: 212 TRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLFPSLALYTT 391
KA ++ M R G PD+VT+ +L++ E A++L+ +M ++ + P + Y
Sbjct: 235 IDKAQSIISFMRRNGCEPDLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNE 294
Query: 392 IIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEALHLFEEMQTKG 571
++ LCK R+D A+ + + +E + DVV+YN +I C A A LFEEM KG
Sbjct: 295 LLKGLCKANRLDKAYMMMVNKMEAKGLCDVVSYNTIIKALCTASHTKRAYKLFEEMGGKG 354
Query: 572 VYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETLIKAINSKEAS*GMS 751
+ PD VTF ++A + DQM G D L T++ + K GM+
Sbjct: 355 ITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHL-CKTGKMGMA 413
Query: 752 PYPFPD 769
F D
Sbjct: 414 HSVFCD 419
Score = 108 bits (269), Expect = 3e-21
Identities = 69/236 (29%), Positives = 113/236 (47%)
Frame = +2
Query: 14 EKLLAKMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTIINA 193
EKLL M+R G PD ++YN L LC N+++ A ++ +E D+V+Y +IN
Sbjct: 99 EKLLEDMDRLGYVPDIWAYNIYLNLLCCENQLDVALGVVQTMVEKGREPDIVTYTIVING 158
Query: 194 FCKAGRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLFPS 373
C+AGR A ++ M RKG +PD L+ +G +A +L + + S
Sbjct: 159 LCRAGRFDSAVEIWRNMVRKGFSPDEKACRALVLGLCHDGKVDLAYELTVGAMRGRIKFS 218
Query: 374 LALYTTIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEALHLFE 553
++Y ++I+ C+ G ID A S+ + PD+V YN L++ C+ + EA +L +
Sbjct: 219 KSIYNSLINGFCQAGWIDKAQSIISFMRRNGCEPDLVTYNVLLNYCCDELLLEEAENLMK 278
Query: 554 EMQTKGVYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETLIKAI 721
+M+ GV PD ++ A + ME D T+IKA+
Sbjct: 279 KMERSGVEPDVYSYNELLKGLCKANRLDKAYMMMVNKMEAKGLCDVVSYNTIIKAL 334
Score = 95.1 bits (235), Expect = 2e-17
Identities = 60/236 (25%), Positives = 104/236 (44%)
Frame = +2
Query: 14 EKLLAKMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTIINA 193
E+ +M G +S++Y+ + GLCK LL + + D+ +YN +N
Sbjct: 64 EQYYDRMIPQGFSLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNL 123
Query: 194 FCKAGRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLFPS 373
C + A ++ M KG PD+VT+TI+I+ + G A ++ M + P
Sbjct: 124 LCCENQLDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPD 183
Query: 374 LALYTTIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEALHLFE 553
++ LC +G++D+A+ L + RI YN+LI+G+C A +++A +
Sbjct: 184 EKACRALVLGLCHDGKVDLAYELTVGAMRGRIKFSKSIYNSLINGFCQAGWIDKAQSIIS 243
Query: 554 EMQTKGVYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETLIKAI 721
M+ G PD VT+ A + +M G D Y L+K +
Sbjct: 244 FMRRNGCEPDLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNELLKGL 299
Score = 69.3 bits (168), Expect = 1e-09
Identities = 37/140 (26%), Positives = 67/140 (47%)
Frame = +2
Query: 167 VSYNTIINAFCKAGRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQ 346
+ YN I + R A + M +G + + T++ I K N ++ + LL+
Sbjct: 45 IDYNRFIGVLVRQSRFDLAEQYYDRMIPQGFSLNSFTYSRFISGLCKVKNFVLIEKLLED 104
Query: 347 MTKTSLFPSLALYTTIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQ 526
M + P + Y ++ LC ++D+A + +VE+ PD+V Y +I+G C A +
Sbjct: 105 MDRLGYVPDIWAYNIYLNLLCCENQLDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGR 164
Query: 527 VNEALHLFEEMQTKGVYPDE 586
+ A+ ++ M KG PDE
Sbjct: 165 FDSAVEIWRNMVRKGFSPDE 184
Score = 65.9 bits (159), Expect = 2e-08
Identities = 44/182 (24%), Positives = 75/182 (41%)
Frame = +2
Query: 167 VSYNTIINAFCKAGRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQ 346
++Y I+++ KAG +A K EM + + + I +++ +A+ D+
Sbjct: 10 LAYRAQISSYVKAGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDR 69
Query: 347 MTKTSLFPSLALYTTIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQ 526
M + Y+ I LCK + L D+ PD+ AYN ++ C Q
Sbjct: 70 MIPQGFSLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQ 129
Query: 527 VNEALHLFEEMQTKGVYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSET 706
++ AL + + M KG PD VT+ A +W M+ KGF+ D
Sbjct: 130 LDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRA 189
Query: 707 LI 712
L+
Sbjct: 190 LV 191
>gb|EXB82495.1| hypothetical protein L484_027670 [Morus notabilis]
Length = 513
Score = 301 bits (771), Expect = 2e-79
Identities = 151/244 (61%), Positives = 185/244 (75%)
Frame = +2
Query: 2 LGEGEKLLAKMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNT 181
L E KL+ MER GM+PDSYSYN++LKGLC+ +R +KAY+L+V+ ME+K +A+VVSYNT
Sbjct: 270 LDEANKLINTMERIGMKPDSYSYNKLLKGLCRAHRPDKAYLLMVDSMESKGLANVVSYNT 329
Query: 182 IINAFCKAGRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTS 361
II AFCK R R+AY+L EM +KGI PDVVTFTILI AFL G+S VAK LLDQMT
Sbjct: 330 IIGAFCKLLRVRRAYQLFEEMRQKGIEPDVVTFTILIKAFLSVGSSDVAKRLLDQMTGMG 389
Query: 362 LFPSLALYTTIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEAL 541
L P YT I+DHLCK G+I MAHS+F D+VE+ I PDV++YNA+I+G C AF+V+EA+
Sbjct: 390 LLPDCLFYTIIVDHLCKAGKIGMAHSVFSDMVERGITPDVISYNAIINGLCKAFRVSEAV 449
Query: 542 HLFEEMQTKGVYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETLIKAI 721
HL+EEMQ +G+ PDEVTF LAC VWDQMMEKGFTL+ LSETLI AI
Sbjct: 450 HLYEEMQARGLCPDEVTFKLIIGGLIKENKLPLACRVWDQMMEKGFTLEPALSETLINAI 509
Query: 722 NSKE 733
NSK+
Sbjct: 510 NSKD 513
Score = 97.1 bits (240), Expect = 6e-18
Identities = 63/231 (27%), Positives = 105/231 (45%)
Frame = +2
Query: 29 KMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTIINAFCKAG 208
KM G ++Y+ + LC LL + + I D+ ++N +N C
Sbjct: 69 KMAPQGFSLYPFTYSRFISALCAVKNFLLVEKLLEDMDKLGCIPDIWAFNIYLNVLCGEH 128
Query: 209 RTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLFPSLALYT 388
R + A ++ M +G PDVVT+TILID K A + M K P T
Sbjct: 129 RVQLALEVFRRMVERGREPDVVTYTILIDGLCKAWKFDAAVEAWCGMIKKGFVPDTIACT 188
Query: 389 TIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEALHLFEEMQTK 568
++ LC+ G++D+A+ L ++ R+ + + YN+LISG+C A ++++A + + M+
Sbjct: 189 ALVVGLCEGGKVDLAYELTVGALKGRVKFNNLIYNSLISGFCRAGRIDKAQVIKDFMKRD 248
Query: 569 GVYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETLIKAI 721
G PD VT+ A + + M G DSY L+K +
Sbjct: 249 GCEPDLVTYNVLLIYCCDKLMLDEANKLINTMERIGMKPDSYSYNKLLKGL 299
Score = 95.1 bits (235), Expect = 2e-17
Identities = 58/194 (29%), Positives = 95/194 (48%)
Frame = +2
Query: 14 EKLLAKMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTIINA 193
EKLL M++ G PD +++N L LC +RV+ A + +E DVV+Y +I+
Sbjct: 99 EKLLEDMDKLGCIPDIWAFNIYLNVLCGEHRVQLALEVFRRMVERGREPDVVTYTILIDG 158
Query: 194 FCKAGRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLFPS 373
CKA + A + M +KG PD + T L+ + G +A +L K + +
Sbjct: 159 LCKAWKFDAAVEAWCGMIKKGFVPDTIACTALVVGLCEGGKVDLAYELTVGALKGRVKFN 218
Query: 374 LALYTTIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEALHLFE 553
+Y ++I C+ GRID A + + PD+V YN L+ C+ ++EA L
Sbjct: 219 NLIYNSLISGFCRAGRIDKAQVIKDFMKRDGCEPDLVTYNVLLIYCCDKLMLDEANKLIN 278
Query: 554 EMQTKGVYPDEVTF 595
M+ G+ PD ++
Sbjct: 279 TMERIGMKPDSYSY 292
Score = 95.1 bits (235), Expect = 2e-17
Identities = 73/275 (26%), Positives = 121/275 (44%), Gaps = 40/275 (14%)
Frame = +2
Query: 32 MERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTIINAFCKAGR 211
M + G PD+ + ++ GLC+ +V+ AY L V ++ + + + YN++I+ FC+AGR
Sbjct: 175 MIKKGFVPDTIACTALVVGLCEGGKVDLAYELTVGALKGRVKFNNLIYNSLISGFCRAGR 234
Query: 212 TRKAYKLLGEMGRKGIAPDVVTFTILI-----DAFLKEGNSIVAKD-------------- 334
KA + M R G PD+VT+ +L+ L E N ++
Sbjct: 235 IDKAQVIKDFMKRDGCEPDLVTYNVLLIYCCDKLMLDEANKLINTMERIGMKPDSYSYNK 294
Query: 335 -----------------LLDQMTKTSLFPSLALYTTIIDHLCKNGRIDMAHSLFHDIVEQ 463
++D M L ++ Y TII CK R+ A+ LF ++ ++
Sbjct: 295 LLKGLCRAHRPDKAYLLMVDSMESKGL-ANVVSYNTIIGAFCKLLRVRRAYQLFEEMRQK 353
Query: 464 RIGPDVVAYNALISGYCNAFQVNEALHLFEEMQTKGVYPDEVTFXXXXXXXXXXXXXSLA 643
I PDVV + LI + + + A L ++M G+ PD + + +A
Sbjct: 354 GIEPDVVTFTILIKAFLSVGSSDVAKRLLDQMTGMGLLPDCLFYTIIVDHLCKAGKIGMA 413
Query: 644 CGVWDQMMEKGFTLD--SY--LSETLIKAINSKEA 736
V+ M+E+G T D SY + L KA EA
Sbjct: 414 HSVFSDMVERGITPDVISYNAIINGLCKAFRVSEA 448
Score = 68.9 bits (167), Expect = 2e-09
Identities = 44/165 (26%), Positives = 72/165 (43%)
Frame = +2
Query: 95 KTNRVEKAYMLLVNKMEAKEIADVVSYNTIINAFCKAGRTRKAYKLLGEMGRKGIAPDVV 274
KT ++ A L + V YN I + R A +M +G +
Sbjct: 21 KTGLIDHAVQLFDEMSHSDCRVFSVDYNRFIGVLARHSRLDLAEHYYHKMAPQGFSLYPF 80
Query: 275 TFTILIDAFLKEGNSIVAKDLLDQMTKTSLFPSLALYTTIIDHLCKNGRIDMAHSLFHDI 454
T++ I A N ++ + LL+ M K P + + ++ LC R+ +A +F +
Sbjct: 81 TYSRFISALCAVKNFLLVEKLLEDMDKLGCIPDIWAFNIYLNVLCGEHRVQLALEVFRRM 140
Query: 455 VEQRIGPDVVAYNALISGYCNAFQVNEALHLFEEMQTKGVYPDEV 589
VE+ PDVV Y LI G C A++ + A+ + M KG PD +
Sbjct: 141 VERGREPDVVTYTILIDGLCKAWKFDAAVEAWCGMIKKGFVPDTI 185
>ref|XP_003531325.2| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like isoform X1 [Glycine max]
gi|571471241|ref|XP_006585252.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like isoform X2 [Glycine max]
Length = 521
Score = 300 bits (768), Expect = 4e-79
Identities = 138/244 (56%), Positives = 185/244 (75%)
Frame = +2
Query: 8 EGEKLLAKMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTII 187
E +L+ MERSG+EPD YSYNE+LKG CK N V++A++++V +M+ K + DVVSYNT+I
Sbjct: 277 EAVRLVETMERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVI 336
Query: 188 NAFCKAGRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLF 367
AFCKA RTRK Y+L EM KGI PD+VTF ILIDAFL+EG++ V K LLD+MTK +
Sbjct: 337 TAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVL 396
Query: 368 PSLALYTTIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEALHL 547
P YT ++DHLCKNG++D+AHS+F D+VE + PDV++YNAL++G+C +V +A+HL
Sbjct: 397 PDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHL 456
Query: 548 FEEMQTKGVYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETLIKAINS 727
F+EMQ+KG+YPDEVT+ SLAC VWDQMME+GFTL+ +LSETL+ AI S
Sbjct: 457 FDEMQSKGLYPDEVTYKLIVGGLIRGKKISLACRVWDQMMERGFTLNRHLSETLVNAIQS 516
Query: 728 KEAS 739
+ +
Sbjct: 517 SDGT 520
Score = 123 bits (309), Expect = 6e-26
Identities = 66/196 (33%), Positives = 108/196 (55%)
Frame = +2
Query: 8 EGEKLLAKMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTII 187
E K+ ++ G+ PD + ++ GLC RV+ AY L+V ++ + + YN +I
Sbjct: 172 EAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALI 231
Query: 188 NAFCKAGRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLF 367
+ FC+ GR KA K+ M R G PD+VT+ IL++ +EG A L++ M ++ +
Sbjct: 232 DGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVE 291
Query: 368 PSLALYTTIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEALHL 547
P L Y ++ CK +D AH + + ++ + DVV+YN +I+ +C A + + L
Sbjct: 292 PDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYEL 351
Query: 548 FEEMQTKGVYPDEVTF 595
FEEM KG+ PD VTF
Sbjct: 352 FEEMCGKGIRPDMVTF 367
Score = 102 bits (253), Expect = 2e-19
Identities = 62/188 (32%), Positives = 94/188 (50%)
Frame = +2
Query: 20 LLAKMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTIINAFC 199
LL M+ G PD +++N L LC+ NR+E A L + DVVSY II+A C
Sbjct: 106 LLLDMDSLGFVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALC 165
Query: 200 KAGRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLFPSLA 379
A R +A K+ + KG++PD L+ G +A +L+ + K + +
Sbjct: 166 NAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSL 225
Query: 380 LYTTIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEALHLFEEM 559
+Y +ID C+ GR+D A + + PD+V YN L++ C V+EA+ L E M
Sbjct: 226 VYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETM 285
Query: 560 QTKGVYPD 583
+ GV PD
Sbjct: 286 ERSGVEPD 293
Score = 92.4 bits (228), Expect = 2e-16
Identities = 57/221 (25%), Positives = 99/221 (44%), Gaps = 3/221 (1%)
Frame = +2
Query: 62 YSYNEVLKGLCKTNR---VEKAYMLLVNKMEAKEIADVVSYNTIINAFCKAGRTRKAYKL 232
++Y+ + LC + + LL++ + D+ ++NT +N C+ R A +L
Sbjct: 82 FTYSRFISALCSAPNNINLPLIHSLLLDMDSLGFVPDIWAFNTYLNLLCRQNRLETALEL 141
Query: 233 LGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLFPSLALYTTIIDHLCK 412
M KG PDVV++TI+IDA A + ++ L P ++ LC
Sbjct: 142 FHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCS 201
Query: 413 NGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEALHLFEEMQTKGVYPDEVT 592
GR+D+A+ L +++ + + + YNALI G+C +V++A+ + M G PD VT
Sbjct: 202 GGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVT 261
Query: 593 FXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETLIK 715
+ A + + M G D Y L+K
Sbjct: 262 YNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLK 302
>gb|EOY00680.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
cacao] gi|508708784|gb|EOY00681.1| Pentatricopeptide
repeat superfamily protein isoform 1 [Theobroma cacao]
gi|508708785|gb|EOY00682.1| Pentatricopeptide repeat
superfamily protein isoform 1 [Theobroma cacao]
gi|508708786|gb|EOY00683.1| Pentatricopeptide repeat
superfamily protein isoform 1 [Theobroma cacao]
Length = 516
Score = 297 bits (761), Expect = 2e-78
Identities = 146/245 (59%), Positives = 181/245 (73%)
Frame = +2
Query: 2 LGEGEKLLAKMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNT 181
L E KL+ KMERSG+ PD Y YN+++KG C NR +KA +L+VNKMEA +AD VS+NT
Sbjct: 271 LEEAAKLVKKMERSGIGPDVYGYNQMIKGFCNANRPDKALLLMVNKMEANGLADAVSHNT 330
Query: 182 IINAFCKAGRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTS 361
II AFCK G KAYKL EMGRKGIAPDVVTFT LI A L EG+S +AK LLD+M+
Sbjct: 331 IIKAFCKGGHIGKAYKLFEEMGRKGIAPDVVTFTTLIKACLTEGSSDIAKALLDRMSGMG 390
Query: 362 LFPSLALYTTIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEAL 541
L P YT IIDHLCKNG+++MAHS+F D+++Q + PDVV+YNALI+G+C + + +EA+
Sbjct: 391 LLPDCIFYTAIIDHLCKNGKVEMAHSVFDDMIKQGVNPDVVSYNALINGFCKSNRASEAI 450
Query: 542 HLFEEMQTKGVYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETLIKAI 721
HL+EEMQT+G PDEVTF S AC VWDQMMEKGFTLD +SETLI AI
Sbjct: 451 HLYEEMQTRGFSPDEVTFKLIIGGLIREKKLSKACKVWDQMMEKGFTLDGAVSETLINAI 510
Query: 722 NSKEA 736
+S ++
Sbjct: 511 HSVDS 515
Score = 100 bits (250), Expect = 4e-19
Identities = 65/229 (28%), Positives = 107/229 (46%), Gaps = 1/229 (0%)
Frame = +2
Query: 29 KMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIA-DVVSYNTIINAFCKA 205
+M G PD+ + ++ GLC +V+ AY L+V ++ +I + YN +I+ FC+
Sbjct: 174 EMVGKGFRPDNKACCALVVGLCDGGKVDLAYELVVEVIKGGDIEFSTLLYNALISGFCRI 233
Query: 206 GRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLFPSLALY 385
R KA + M + G PD+VT+ +L++ E A L+ +M ++ + P + Y
Sbjct: 234 RRIDKAQAIKLFMTKNGCEPDLVTYNVLLNYCCNELMLEEAAKLVKKMERSGIGPDVYGY 293
Query: 386 TTIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEALHLFEEMQT 565
+I C R D A L + +E D V++N +I +C + +A LFEEM
Sbjct: 294 NQMIKGFCNANRPDKALLLMVNKMEANGLADAVSHNTIIKAFCKGGHIGKAYKLFEEMGR 353
Query: 566 KGVYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETLI 712
KG+ PD VTF +A + D+M G D +I
Sbjct: 354 KGIAPDVVTFTTLIKACLTEGSSDIAKALLDRMSGMGLLPDCIFYTAII 402
Score = 92.8 bits (229), Expect = 1e-16
Identities = 65/236 (27%), Positives = 106/236 (44%), Gaps = 1/236 (0%)
Frame = +2
Query: 14 EKLLAKMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTIINA 193
E LL M++ PD +++N L LC+ ++E A + + ++ DVV+Y +I+
Sbjct: 99 ELLLNDMDKLNYVPDIWAFNIYLNLLCREKKIELALEVFHSLVKKGRDPDVVTYTIMIDG 158
Query: 194 FCKAGRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTK-TSLFP 370
CKAG+ A EM KG PD L+ G +A +L+ ++ K +
Sbjct: 159 LCKAGKFDNAVGFWREMVGKGFRPDNKACCALVVGLCDGGKVDLAYELVVEVIKGGDIEF 218
Query: 371 SLALYTTIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEALHLF 550
S LY +I C+ RID A ++ + + PD+V YN L++ CN + EA L
Sbjct: 219 STLLYNALISGFCRIRRIDKAQAIKLFMTKNGCEPDLVTYNVLLNYCCNELMLEEAAKLV 278
Query: 551 EEMQTKGVYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETLIKA 718
++M+ G+ PD + A + ME D+ T+IKA
Sbjct: 279 KKMERSGIGPDVYGYNQMIKGFCNANRPDKALLLMVNKMEANGLADAVSHNTIIKA 334
Score = 86.7 bits (213), Expect = 9e-15
Identities = 58/233 (24%), Positives = 102/233 (43%), Gaps = 4/233 (1%)
Frame = +2
Query: 29 KMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTIINAFCKAG 208
+M G ++Y+ + LC +LL + + + D+ ++N +N C+
Sbjct: 69 QMFPQGFSLTPFTYSRFISALCPVKNFNFIELLLNDMDKLNYVPDIWAFNIYLNLLCREK 128
Query: 209 RTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLFPSLALYT 388
+ A ++ + +KG PDVVT+TI+ID K G A +M P
Sbjct: 129 KIELALEVFHSLVKKGRDPDVVTYTIMIDGLCKAGKFDNAVGFWREMVGKGFRPDNKACC 188
Query: 389 TIIDHLCKNGRIDMAHSLFHDIVEQRIGPDV----VAYNALISGYCNAFQVNEALHLFEE 556
++ LC G++D+A+ L ++++ G D+ + YNALISG+C ++++A +
Sbjct: 189 ALVVGLCDGGKVDLAYELVVEVIK---GGDIEFSTLLYNALISGFCRIRRIDKAQAIKLF 245
Query: 557 MQTKGVYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETLIK 715
M G PD VT+ A + +M G D Y +IK
Sbjct: 246 MTKNGCEPDLVTYNVLLNYCCNELMLEEAAKLVKKMERSGIGPDVYGYNQMIK 298
Score = 66.2 bits (160), Expect = 1e-08
Identities = 39/139 (28%), Positives = 66/139 (47%)
Frame = +2
Query: 167 VSYNTIINAFCKAGRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQ 346
+ YN I + R A +M +G + T++ I A N + LL+
Sbjct: 45 LDYNRFIGVLLRDSRFDLAEYYYFQMFPQGFSLTPFTYSRFISALCPVKNFNFIELLLND 104
Query: 347 MTKTSLFPSLALYTTIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQ 526
M K + P + + ++ LC+ +I++A +FH +V++ PDVV Y +I G C A +
Sbjct: 105 MDKLNYVPDIWAFNIYLNLLCREKKIELALEVFHSLVKKGRDPDVVTYTIMIDGLCKAGK 164
Query: 527 VNEALHLFEEMQTKGVYPD 583
+ A+ + EM KG PD
Sbjct: 165 FDNAVGFWREMVGKGFRPD 183
>gb|EMJ28460.1| hypothetical protein PRUPE_ppa017811mg [Prunus persica]
Length = 541
Score = 296 bits (759), Expect = 4e-78
Identities = 145/240 (60%), Positives = 182/240 (75%)
Frame = +2
Query: 2 LGEGEKLLAKMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNT 181
L E EKL+ KMERSGMEPD YSYN++LKGLC+ NR +KAY+L+ +ME K + +VVSYNT
Sbjct: 270 LEEAEKLMKKMERSGMEPDVYSYNQLLKGLCQANRADKAYLLMRTRMEPKGLCNVVSYNT 329
Query: 182 IINAFCKAGRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTS 361
II AFC+A RT +AYKL EMG+KG PDVVTFTILI+AFL+EG+S +A LLDQMT
Sbjct: 330 IITAFCRAHRTGRAYKLFEEMGQKGTMPDVVTFTILIEAFLREGSSDIANKLLDQMTVMG 389
Query: 362 LFPSLALYTTIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEAL 541
L P YTTI+DHLCK+G+I MA+S+F D++E+ I PD V++NALI+G C A +V+EA+
Sbjct: 390 LLPDRIFYTTIVDHLCKSGKIAMAYSVFSDMLEKGIAPDAVSFNALINGLCKASRVSEAM 449
Query: 542 HLFEEMQTKGVYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETLIKAI 721
HL+EEMQ +G PDEVTF S+AC VWDQMMEKGFTLD +SE L+K +
Sbjct: 450 HLYEEMQNRGCCPDEVTFKLIIGGLIRENKLSVACRVWDQMMEKGFTLDGAVSERLMKLL 509
Score = 103 bits (258), Expect = 5e-20
Identities = 62/194 (31%), Positives = 98/194 (50%)
Frame = +2
Query: 14 EKLLAKMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTIINA 193
EKL+ M+R G PD +++N L LC+ NR A + ++ DVVSY +I+
Sbjct: 99 EKLIRDMDRLGAVPDIWAFNIYLNLLCQENRAHFALEVFHRMVDKGREPDVVSYTILIDG 158
Query: 194 FCKAGRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLFPS 373
CKA + KA + M RKG PD + T L+ G +A +L+ K + S
Sbjct: 159 LCKARQFDKAVDIWTSMIRKGFKPDNIACTALVVGLCDGGKVDLAYNLVIGEMKGQVKFS 218
Query: 374 LALYTTIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEALHLFE 553
+Y T+I+ C+ GRID A ++ + D+V +N L+ CN F + EA L +
Sbjct: 219 NLMYNTLINGFCRAGRIDKAQAIKSFMKRNGCESDLVTHNVLLKYCCNEFMLEEAEKLMK 278
Query: 554 EMQTKGVYPDEVTF 595
+M+ G+ PD ++
Sbjct: 279 KMERSGMEPDVYSY 292
Score = 91.7 bits (226), Expect = 3e-16
Identities = 58/231 (25%), Positives = 102/231 (44%)
Frame = +2
Query: 29 KMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTIINAFCKAG 208
+M G +++Y+ + GLCK L+ + + D+ ++N +N C+
Sbjct: 69 EMVPQGFSLSAFTYSRFISGLCKIRNFTLIEKLIRDMDRLGAVPDIWAFNIYLNLLCQEN 128
Query: 209 RTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLFPSLALYT 388
R A ++ M KG PDVV++TILID K A D+ M + P T
Sbjct: 129 RAHFALEVFHRMVDKGREPDVVSYTILIDGLCKARQFDKAVDIWTSMIRKGFKPDNIACT 188
Query: 389 TIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEALHLFEEMQTK 568
++ LC G++D+A++L ++ ++ + YN LI+G+C A ++++A + M+
Sbjct: 189 ALVVGLCDGGKVDLAYNLVIGEMKGQVKFSNLMYNTLINGFCRAGRIDKAQAIKSFMKRN 248
Query: 569 GVYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETLIKAI 721
G D VT A + +M G D Y L+K +
Sbjct: 249 GCESDLVTHNVLLKYCCNEFMLEEAEKLMKKMERSGMEPDVYSYNQLLKGL 299
Score = 69.3 bits (168), Expect = 1e-09
Identities = 42/165 (25%), Positives = 73/165 (44%)
Frame = +2
Query: 95 KTNRVEKAYMLLVNKMEAKEIADVVSYNTIINAFCKAGRTRKAYKLLGEMGRKGIAPDVV 274
KT +++A + + + YN I + R A EM +G +
Sbjct: 21 KTGLIDQALQVFDEMTRSDCRVFSIDYNRFIGVLVRHSRYDLAEHYYYEMVPQGFSLSAF 80
Query: 275 TFTILIDAFLKEGNSIVAKDLLDQMTKTSLFPSLALYTTIIDHLCKNGRIDMAHSLFHDI 454
T++ I K N + + L+ M + P + + ++ LC+ R A +FH +
Sbjct: 81 TYSRFISGLCKIRNFTLIEKLIRDMDRLGAVPDIWAFNIYLNLLCQENRAHFALEVFHRM 140
Query: 455 VEQRIGPDVVAYNALISGYCNAFQVNEALHLFEEMQTKGVYPDEV 589
V++ PDVV+Y LI G C A Q ++A+ ++ M KG PD +
Sbjct: 141 VDKGREPDVVSYTILIDGLCKARQFDKAVDIWTSMIRKGFKPDNI 185
Score = 57.8 bits (138), Expect = 4e-06
Identities = 39/173 (22%), Positives = 66/173 (38%)
Frame = +2
Query: 194 FCKAGRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLFPS 373
+ K G +A ++ EM R + + I ++ +A+ +M S
Sbjct: 19 YVKTGLIDQALQVFDEMTRSDCRVFSIDYNRFIGVLVRHSRYDLAEHYYYEMVPQGFSLS 78
Query: 374 LALYTTIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEALHLFE 553
Y+ I LCK + L D+ PD+ A+N ++ C + + AL +F
Sbjct: 79 AFTYSRFISGLCKIRNFTLIEKLIRDMDRLGAVPDIWAFNIYLNLLCQENRAHFALEVFH 138
Query: 554 EMQTKGVYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETLI 712
M KG PD V++ A +W M+ KGF D+ L+
Sbjct: 139 RMVDKGREPDVVSYTILIDGLCKARQFDKAVDIWTSMIRKGFKPDNIACTALV 191
>ref|XP_004310156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 516
Score = 296 bits (758), Expect = 5e-78
Identities = 150/244 (61%), Positives = 183/244 (75%)
Frame = +2
Query: 2 LGEGEKLLAKMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNT 181
L E EKL+ +ME+ GM+ D+YSYN LKGLCK NR EKAY+ + N ME K + +VVS+NT
Sbjct: 271 LEEAEKLMRQMEKIGMKLDAYSYNGFLKGLCKDNRPEKAYLFMKNMMEPKGLCNVVSFNT 330
Query: 182 IINAFCKAGRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTS 361
II A CK G+TR+AYKL EM +KGI PDVVTFTILI AFL+EG+S VAK LLDQMT
Sbjct: 331 IIMACCKGGQTRRAYKLFQEMFQKGILPDVVTFTILIGAFLREGSSDVAKKLLDQMTGMD 390
Query: 362 LFPSLALYTTIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEAL 541
L P YTTIIDHLCK+G+I MA +F+D++E+ I DVV YNALISG C A +V EA+
Sbjct: 391 LLPDRIFYTTIIDHLCKSGKIAMACDMFNDMLEKGITADVVLYNALISGLCRASRVTEAM 450
Query: 542 HLFEEMQTKGVYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETLIKAI 721
HL+EEMQT+G +PDEVT+ S+ACGVWD+MMEKGFTLD LSETLI A+
Sbjct: 451 HLYEEMQTRGCFPDEVTYKVVIGGLIKDKRLSVACGVWDEMMEKGFTLDRVLSETLINAV 510
Query: 722 NSKE 733
+SK+
Sbjct: 511 HSKD 514
Score = 104 bits (259), Expect = 4e-20
Identities = 67/227 (29%), Positives = 107/227 (47%)
Frame = +2
Query: 32 MERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTIINAFCKAGR 211
M G PD+ + ++ GLC +V+ AY L++ +M+ + + YN +I+ FC+A R
Sbjct: 176 MISKGFRPDTIACTALVVGLCGGGKVDLAYDLVIGEMKGGVEFNNLIYNALISGFCRARR 235
Query: 212 TRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLFPSLALYTT 391
KA + M R G PD+VT +L++ E A+ L+ QM K + Y
Sbjct: 236 IDKAQAIKLFMKRNGCKPDLVTHNVLLNYCCNEFMLEEAEKLMRQMEKIGMKLDAYSYNG 295
Query: 392 IIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEALHLFEEMQTKG 571
+ LCK+ R + A+ +++E + +VV++N +I C Q A LF+EM KG
Sbjct: 296 FLKGLCKDNRPEKAYLFMKNMMEPKGLCNVVSFNTIIMACCKGGQTRRAYKLFQEMFQKG 355
Query: 572 VYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETLI 712
+ PD VTF +A + DQM D T+I
Sbjct: 356 ILPDVVTFTILIGAFLREGSSDVAKKLLDQMTGMDLLPDRIFYTTII 402
Score = 101 bits (251), Expect = 3e-19
Identities = 61/194 (31%), Positives = 95/194 (48%)
Frame = +2
Query: 14 EKLLAKMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTIINA 193
EKLL M+R G PD +++N L LC+ NR+ A + + DVVSY +I+
Sbjct: 100 EKLLRDMDRLGSVPDIWAFNIYLNLLCQENRIHYALEVFDRMADKGREPDVVSYTIVIHG 159
Query: 194 FCKAGRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLFPS 373
CKAGR A ++ M KG PD + T L+ G +A DL+ K + +
Sbjct: 160 LCKAGRFDNAVEIWNGMISKGFRPDTIACTALVVGLCGGGKVDLAYDLVIGEMKGGVEFN 219
Query: 374 LALYTTIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEALHLFE 553
+Y +I C+ RID A ++ + PD+V +N L++ CN F + EA L
Sbjct: 220 NLIYNALISGFCRARRIDKAQAIKLFMKRNGCKPDLVTHNVLLNYCCNEFMLEEAEKLMR 279
Query: 554 EMQTKGVYPDEVTF 595
+M+ G+ D ++
Sbjct: 280 QMEKIGMKLDAYSY 293
Score = 97.1 bits (240), Expect = 6e-18
Identities = 61/231 (26%), Positives = 104/231 (45%)
Frame = +2
Query: 29 KMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTIINAFCKAG 208
+M G ++Y+ + GLC N LL + + D+ ++N +N C+
Sbjct: 70 EMAPQGFSLTPFTYSRFISGLCNVNNFTLIEKLLRDMDRLGSVPDIWAFNIYLNLLCQEN 129
Query: 209 RTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLFPSLALYT 388
R A ++ M KG PDVV++TI+I K G A ++ + M P T
Sbjct: 130 RIHYALEVFDRMADKGREPDVVSYTIVIHGLCKAGRFDNAVEIWNGMISKGFRPDTIACT 189
Query: 389 TIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEALHLFEEMQTK 568
++ LC G++D+A+ L ++ + + + YNALISG+C A ++++A + M+
Sbjct: 190 ALVVGLCGGGKVDLAYDLVIGEMKGGVEFNNLIYNALISGFCRARRIDKAQAIKLFMKRN 249
Query: 569 GVYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETLIKAI 721
G PD VT A + QM + G LD+Y +K +
Sbjct: 250 GCKPDLVTHNVLLNYCCNEFMLEEAEKLMRQMEKIGMKLDAYSYNGFLKGL 300
Score = 63.9 bits (154), Expect = 6e-08
Identities = 42/174 (24%), Positives = 73/174 (41%)
Frame = +2
Query: 68 YNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTIINAFCKAGRTRKAYKLLGEMG 247
Y + KT ++ A + ++ V YN I K R A EM
Sbjct: 13 YRSRMTHYVKTGLIDHALHVFDEMTQSNCRVFSVDYNRFIGVLVKHSRYDLAEHYYYEMA 72
Query: 248 RKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLFPSLALYTTIIDHLCKNGRID 427
+G + T++ I N + + LL M + P + + ++ LC+ RI
Sbjct: 73 PQGFSLTPFTYSRFISGLCNVNNFTLIEKLLRDMDRLGSVPDIWAFNIYLNLLCQENRIH 132
Query: 428 MAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEALHLFEEMQTKGVYPDEV 589
A +F + ++ PDVV+Y +I G C A + + A+ ++ M +KG PD +
Sbjct: 133 YALEVFDRMADKGREPDVVSYTIVIHGLCKAGRFDNAVEIWNGMISKGFRPDTI 186
Score = 56.6 bits (135), Expect = 1e-05
Identities = 39/180 (21%), Positives = 69/180 (38%)
Frame = +2
Query: 173 YNTIINAFCKAGRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMT 352
Y + + + K G A + EM + V + I +K +A+ +M
Sbjct: 13 YRSRMTHYVKTGLIDHALHVFDEMTQSNCRVFSVDYNRFIGVLVKHSRYDLAEHYYYEMA 72
Query: 353 KTSLFPSLALYTTIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVN 532
+ Y+ I LC + L D+ PD+ A+N ++ C +++
Sbjct: 73 PQGFSLTPFTYSRFISGLCNVNNFTLIEKLLRDMDRLGSVPDIWAFNIYLNLLCQENRIH 132
Query: 533 EALHLFEEMQTKGVYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETLI 712
AL +F+ M KG PD V++ A +W+ M+ KGF D+ L+
Sbjct: 133 YALEVFDRMADKGREPDVVSYTIVIHGLCKAGRFDNAVEIWNGMISKGFRPDTIACTALV 192
>ref|XP_004240634.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Solanum lycopersicum]
Length = 511
Score = 295 bits (755), Expect = 1e-77
Identities = 145/241 (60%), Positives = 181/241 (75%)
Frame = +2
Query: 2 LGEGEKLLAKMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNT 181
L E KL+ KME G+EPD YSYN++L+G CK NR++KAY L+V+KME K + DVVSYNT
Sbjct: 270 LEEAMKLIEKMEGIGLEPDGYSYNQLLRGFCKANRLDKAYKLMVDKMETKGLVDVVSYNT 329
Query: 182 IINAFCKAGRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTS 361
II A CK +++KAY L EM +K I PDVVTFTILI+A LKEGNS VAK L+DQMT
Sbjct: 330 IIRALCKTDQSKKAYILFKEMEQKKILPDVVTFTILIEASLKEGNSSVAKALVDQMTSMG 389
Query: 362 LFPSLALYTTIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEAL 541
LFP LYT+IID+LCK G++ +A S+F D+VEQ + PDV++YNALISG+C A +V EAL
Sbjct: 390 LFPDRVLYTSIIDNLCKTGKLGVAESIFRDMVEQGVAPDVISYNALISGFCKASRVTEAL 449
Query: 542 HLFEEMQTKGVYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETLIKAI 721
L+E+MQT+G+ PDE+TF S+AC +WDQMMEKGFTLD LS+TLI AI
Sbjct: 450 SLYEDMQTRGLNPDEITFKLIIGGLIQGKNLSVACAIWDQMMEKGFTLDRDLSQTLINAI 509
Query: 722 N 724
N
Sbjct: 510 N 510
Score = 122 bits (305), Expect = 2e-25
Identities = 74/227 (32%), Positives = 113/227 (49%)
Frame = +2
Query: 32 MERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTIINAFCKAGR 211
M R G+ PD+ + ++ GLC + +V+ AY L + + + + YNT+IN FC+AGR
Sbjct: 175 MIRKGLRPDNKACKALVFGLCGSGKVDLAYELTLGILRGQVKFNTEIYNTLINGFCRAGR 234
Query: 212 TRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLFPSLALYTT 391
KA + M R G PD+VT+ + ++ E A L+++M L P Y
Sbjct: 235 IDKAQAIKTFMKRNGCEPDLVTYNVFLNYCCNELMLEEAMKLIEKMEGIGLEPDGYSYNQ 294
Query: 392 IIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEALHLFEEMQTKG 571
++ CK R+D A+ L D +E + DVV+YN +I C Q +A LF+EM+ K
Sbjct: 295 LLRGFCKANRLDKAYKLMVDKMETKGLVDVVSYNTIIRALCKTDQSKKAYILFKEMEQKK 354
Query: 572 VYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETLI 712
+ PD VTF S+A + DQM G D L ++I
Sbjct: 355 ILPDVVTFTILIEASLKEGNSSVAKALVDQMTSMGLFPDRVLYTSII 401
Score = 102 bits (254), Expect = 2e-19
Identities = 68/241 (28%), Positives = 112/241 (46%)
Frame = +2
Query: 17 KLLAKMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTIINAF 196
+LL M+R G+ P+ ++YN L LC N V+ A L+ E DVVSY +I+
Sbjct: 100 RLLNDMDRVGIVPNFWAYNMYLNLLCSENLVDIALELIRVMGEKGREPDVVSYTIVISGL 159
Query: 197 CKAGRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLFPSL 376
C+ GR A ++ M RKG+ PD L+ G +A +L + + + +
Sbjct: 160 CRIGRFDNAVEMWHTMIRKGLRPDNKACKALVFGLCGSGKVDLAYELTLGILRGQVKFNT 219
Query: 377 ALYTTIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEALHLFEE 556
+Y T+I+ C+ GRID A ++ + PD+V YN ++ CN + EA+ L E+
Sbjct: 220 EIYNTLINGFCRAGRIDKAQAIKTFMKRNGCEPDLVTYNVFLNYCCNELMLEEAMKLIEK 279
Query: 557 MQTKGVYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETLIKAINSKEA 736
M+ G+ PD ++ A + ME +D T+I+A+ +
Sbjct: 280 MEGIGLEPDGYSYNQLLRGFCKANRLDKAYKLMVDKMETKGLVDVVSYNTIIRALCKTDQ 339
Query: 737 S 739
S
Sbjct: 340 S 340
Score = 92.0 bits (227), Expect = 2e-16
Identities = 59/229 (25%), Positives = 106/229 (46%)
Frame = +2
Query: 29 KMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTIINAFCKAG 208
+M+ G +S +Y++ + GLCK + LL + + + +YN +N C
Sbjct: 69 EMKPVGFSLNSLTYSKFICGLCKVKNFDLISRLLNDMDRVGIVPNFWAYNMYLNLLCSEN 128
Query: 209 RTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLFPSLALYT 388
A +L+ MG KG PDVV++TI+I + G A ++ M + L P
Sbjct: 129 LVDIALELIRVMGEKGREPDVVSYTIVISGLCRIGRFDNAVEMWHTMIRKGLRPDNKACK 188
Query: 389 TIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEALHLFEEMQTK 568
++ LC +G++D+A+ L I+ ++ + YN LI+G+C A ++++A + M+
Sbjct: 189 ALVFGLCGSGKVDLAYELTLGILRGQVKFNTEIYNTLINGFCRAGRIDKAQAIKTFMKRN 248
Query: 569 GVYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETLIK 715
G PD VT+ A + ++M G D Y L++
Sbjct: 249 GCEPDLVTYNVFLNYCCNELMLEEAMKLIEKMEGIGLEPDGYSYNQLLR 297
Score = 65.9 bits (159), Expect = 2e-08
Identities = 43/172 (25%), Positives = 74/172 (43%)
Frame = +2
Query: 68 YNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTIINAFCKAGRTRKAYKLLGEMG 247
Y + KT V +A + ++ + YN II + A EM
Sbjct: 12 YRTRISSYVKTGLVNEALQVFDEMTQSDCRVFSIDYNRIIGVLIRTSHFDLAEGYYNEMK 71
Query: 248 RKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLFPSLALYTTIIDHLCKNGRID 427
G + + +T++ I K N + LL+ M + + P+ Y ++ LC +D
Sbjct: 72 PVGFSLNSLTYSKFICGLCKVKNFDLISRLLNDMDRVGIVPNFWAYNMYLNLLCSENLVD 131
Query: 428 MAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEALHLFEEMQTKGVYPD 583
+A L + E+ PDVV+Y +ISG C + + A+ ++ M KG+ PD
Sbjct: 132 IALELIRVMGEKGREPDVVSYTIVISGLCRIGRFDNAVEMWHTMIRKGLRPD 183
Score = 60.8 bits (146), Expect = 5e-07
Identities = 42/180 (23%), Positives = 76/180 (42%)
Frame = +2
Query: 173 YNTIINAFCKAGRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMT 352
Y T I+++ K G +A ++ EM + + + +I ++ + +A+ ++M
Sbjct: 12 YRTRISSYVKTGLVNEALQVFDEMTQSDCRVFSIDYNRIIGVLIRTSHFDLAEGYYNEMK 71
Query: 353 KTSLFPSLALYTTIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVN 532
+ Y+ I LCK D+ L +D+ I P+ AYN ++ C+ V+
Sbjct: 72 PVGFSLNSLTYSKFICGLCKVKNFDLISRLLNDMDRVGIVPNFWAYNMYLNLLCSENLVD 131
Query: 533 EALHLFEEMQTKGVYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETLI 712
AL L M KG PD V++ A +W M+ KG D+ + L+
Sbjct: 132 IALELIRVMGEKGREPDVVSYTIVISGLCRIGRFDNAVEMWHTMIRKGLRPDNKACKALV 191
>ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223530468|gb|EEF32352.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 554
Score = 293 bits (750), Expect = 5e-77
Identities = 143/246 (58%), Positives = 183/246 (74%)
Frame = +2
Query: 2 LGEGEKLLAKMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNT 181
L + +KLL MERSG+EPD YSYN++LKG+CK N +KAY+L+ NKM K + DVVSYNT
Sbjct: 271 LDDAKKLLKLMERSGIEPDVYSYNQLLKGICKGNCPDKAYLLMTNKMWPKGLCDVVSYNT 330
Query: 182 IINAFCKAGRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTS 361
II AFCK G T AYKL EMG+KGI PDVVTFTI I AFL +G+ +AK LLDQMT+
Sbjct: 331 IIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMG 390
Query: 362 LFPSLALYTTIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEAL 541
L P YTTIIDHLCK+G+++MAHS+F D+VEQ I PDV+++NALI+G+C +V+EA+
Sbjct: 391 LSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISPDVISFNALINGFCKCSRVSEAM 450
Query: 542 HLFEEMQTKGVYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETLIKAI 721
HL+EEMQ +G YPDEVT+ S+AC VW QMM+KGFTLD +++TLI+
Sbjct: 451 HLYEEMQNRGSYPDEVTYKLIIGGLIEEKKISIACMVWGQMMDKGFTLDRAIAQTLIRGN 510
Query: 722 NSKEAS 739
+ + AS
Sbjct: 511 SIENAS 516
Score = 122 bits (306), Expect = 1e-25
Identities = 72/228 (31%), Positives = 114/228 (50%), Gaps = 1/228 (0%)
Frame = +2
Query: 32 MERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIA-DVVSYNTIINAFCKAG 208
M G PD+ + ++ GLC +V+ AY L+++ M++ + + YN +I+ FC+AG
Sbjct: 175 MIHKGFSPDNKACGAIVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAG 234
Query: 209 RTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLFPSLALYT 388
R KA + M R G PD+VT+ + ++ F E AK LL M ++ + P + Y
Sbjct: 235 RIDKAQAIKSFMRRNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYN 294
Query: 389 TIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEALHLFEEMQTK 568
++ +CK D A+ L + + + DVV+YN +I +C A LFEEM K
Sbjct: 295 QLLKGICKGNCPDKAYLLMTNKMWPKGLCDVVSYNTIIKAFCKIGDTTSAYKLFEEMGQK 354
Query: 569 GVYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETLI 712
G+ PD VTF ++A + DQM E G + D T+I
Sbjct: 355 GIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTII 402
Score = 84.0 bits (206), Expect = 6e-14
Identities = 60/233 (25%), Positives = 100/233 (42%), Gaps = 1/233 (0%)
Frame = +2
Query: 26 AKMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTIINAFCKA 205
++M G S++Y+ + GLCK LL + + D+ ++N ++
Sbjct: 68 SQMGTRGFSLSSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVE 127
Query: 206 GRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLFPSLALY 385
GR A ++ ++ + G PDVVT+TI+I K A M P
Sbjct: 128 GRIDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKAC 187
Query: 386 TTIIDHLCKNGRIDMAHSLFHDIVEQ-RIGPDVVAYNALISGYCNAFQVNEALHLFEEMQ 562
I+ LC ++D+A+ L D+++ R+ + YNALISG+C A ++++A + M+
Sbjct: 188 GAIVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFMR 247
Query: 563 TKGVYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETLIKAI 721
G PD VT+ A + M G D Y L+K I
Sbjct: 248 RNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGI 300
Score = 75.9 bits (185), Expect = 2e-11
Identities = 50/195 (25%), Positives = 91/195 (46%), Gaps = 1/195 (0%)
Frame = +2
Query: 14 EKLLAKMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTIINA 193
++LL ME PD +++N L L R++ A + ++ DVV+Y II+
Sbjct: 99 DELLHDMETLNCLPDIWAFNIYLHLLFVEGRIDLALEVFEKIVKNGRKPDVVTYTIIIHG 158
Query: 194 FCKAGRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDL-LDQMTKTSLFP 370
CK + A + +M KG +PD ++ +A +L +D M +
Sbjct: 159 VCKIKKFDTAIQFWRDMIHKGFSPDNKACGAIVVGLCDGRKVDLAYELIIDVMKSGRVKL 218
Query: 371 SLALYTTIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEALHLF 550
S +Y +I C+ GRID A ++ + PD+V YN ++ +C+ +++A L
Sbjct: 219 STLVYNALISGFCRAGRIDKAQAIKSFMRRNGCEPDLVTYNVFLNYFCDELMLDDAKKLL 278
Query: 551 EEMQTKGVYPDEVTF 595
+ M+ G+ PD ++
Sbjct: 279 KLMERSGIEPDVYSY 293
Score = 69.7 bits (169), Expect = 1e-09
Identities = 44/172 (25%), Positives = 70/172 (40%)
Frame = +2
Query: 68 YNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTIINAFCKAGRTRKAYKLLGEMG 247
Y + G K ++KA + ++ + YN I R A +MG
Sbjct: 12 YRSRIAGYVKAGLIDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDLANHYYSQMG 71
Query: 248 RKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLFPSLALYTTIIDHLCKNGRID 427
+G + T++ I K N +LL M + P + + + L GRID
Sbjct: 72 TRGFSLSSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGRID 131
Query: 428 MAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEALHLFEEMQTKGVYPD 583
+A +F IV+ PDVV Y +I G C + + A+ + +M KG PD
Sbjct: 132 LALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPD 183
Score = 58.5 bits (140), Expect = 3e-06
Identities = 42/173 (24%), Positives = 66/173 (38%)
Frame = +2
Query: 173 YNTIINAFCKAGRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMT 352
Y + I + KAG KA ++ EM + + + I + +A QM
Sbjct: 12 YRSRIAGYVKAGLIDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDLANHYYSQMG 71
Query: 353 KTSLFPSLALYTTIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVN 532
S Y+ I LCK L HD+ PD+ A+N + +++
Sbjct: 72 TRGFSLSSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGRID 131
Query: 533 EALHLFEEMQTKGVYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDS 691
AL +FE++ G PD VT+ A W M+ KGF+ D+
Sbjct: 132 LALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDN 184
>ref|XP_006364563.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like isoform X1 [Solanum tuberosum]
Length = 511
Score = 293 bits (749), Expect = 6e-77
Identities = 143/241 (59%), Positives = 179/241 (74%)
Frame = +2
Query: 2 LGEGEKLLAKMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNT 181
L E KL+ KME +G+EPD YSYN++L+G CK NR++KAY L+V+KME K + DVVSYNT
Sbjct: 270 LEEAVKLIEKMEGNGLEPDGYSYNQLLRGFCKANRLDKAYKLMVDKMETKGLVDVVSYNT 329
Query: 182 IINAFCKAGRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTS 361
II A CK ++KAY L EM +K I PDVVTFTILI+A LKEGNS VAK L+DQMT
Sbjct: 330 IIRALCKTDHSKKAYNLFEEMEQKKIVPDVVTFTILIEASLKEGNSSVAKALVDQMTSMG 389
Query: 362 LFPSLALYTTIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEAL 541
LFP LYT+IID+LCK G++ +A S+F D+VEQ + PDV++YNALISG+C A +V EAL
Sbjct: 390 LFPDRVLYTSIIDNLCKTGKLGVAESIFRDMVEQGVAPDVISYNALISGFCKASRVTEAL 449
Query: 542 HLFEEMQTKGVYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETLIKAI 721
L+E+MQ + + PDE+TF S+AC +WDQMMEKGFTLD LS+TLI AI
Sbjct: 450 SLYEDMQARDLNPDEITFKLIIGGLIQEKNLSVACAIWDQMMEKGFTLDRDLSQTLINAI 509
Query: 722 N 724
N
Sbjct: 510 N 510
Score = 124 bits (311), Expect = 4e-26
Identities = 75/227 (33%), Positives = 113/227 (49%)
Frame = +2
Query: 32 MERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTIINAFCKAGR 211
M R G+ PD+ + ++ GLC + RV+ AY L + + + + YNT+IN FC+AGR
Sbjct: 175 MIRKGLRPDNKACKALVFGLCGSGRVDLAYELTLGILRGQVKFNTEIYNTLINGFCRAGR 234
Query: 212 TRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLFPSLALYTT 391
KA + M R G PD+VT+ + ++ E A L+++M L P Y
Sbjct: 235 IDKAQAIKTFMRRNGCEPDLVTYNVFLNYCCNELMLEEAVKLIEKMEGNGLEPDGYSYNQ 294
Query: 392 IIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEALHLFEEMQTKG 571
++ CK R+D A+ L D +E + DVV+YN +I C +A +LFEEM+ K
Sbjct: 295 LLRGFCKANRLDKAYKLMVDKMETKGLVDVVSYNTIIRALCKTDHSKKAYNLFEEMEQKK 354
Query: 572 VYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETLI 712
+ PD VTF S+A + DQM G D L ++I
Sbjct: 355 IVPDVVTFTILIEASLKEGNSSVAKALVDQMTSMGLFPDRVLYTSII 401
Score = 102 bits (254), Expect = 2e-19
Identities = 67/235 (28%), Positives = 110/235 (46%)
Frame = +2
Query: 17 KLLAKMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTIINAF 196
+LL M+R G+ P+ ++YN L LC N V+ A L+ E DVVSY +I+
Sbjct: 100 RLLNDMDRVGIVPNFWAYNMYLNLLCSENLVDIALELIRVMGEKGREPDVVSYTIVISGL 159
Query: 197 CKAGRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLFPSL 376
C+ GR A ++ M RKG+ PD L+ G +A +L + + + +
Sbjct: 160 CRIGRFDNAVEMWHTMIRKGLRPDNKACKALVFGLCGSGRVDLAYELTLGILRGQVKFNT 219
Query: 377 ALYTTIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEALHLFEE 556
+Y T+I+ C+ GRID A ++ + PD+V YN ++ CN + EA+ L E+
Sbjct: 220 EIYNTLINGFCRAGRIDKAQAIKTFMRRNGCEPDLVTYNVFLNYCCNELMLEEAVKLIEK 279
Query: 557 MQTKGVYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETLIKAI 721
M+ G+ PD ++ A + ME +D T+I+A+
Sbjct: 280 MEGNGLEPDGYSYNQLLRGFCKANRLDKAYKLMVDKMETKGLVDVVSYNTIIRAL 334
Score = 94.4 bits (233), Expect = 4e-17
Identities = 60/229 (26%), Positives = 106/229 (46%)
Frame = +2
Query: 29 KMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTIINAFCKAG 208
+M+ G +S +Y++ + GLCK + LL + + + +YN +N C
Sbjct: 69 EMKPVGFSLNSLTYSKFICGLCKVKNFDLISRLLNDMDRVGIVPNFWAYNMYLNLLCSEN 128
Query: 209 RTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLFPSLALYT 388
A +L+ MG KG PDVV++TI+I + G A ++ M + L P
Sbjct: 129 LVDIALELIRVMGEKGREPDVVSYTIVISGLCRIGRFDNAVEMWHTMIRKGLRPDNKACK 188
Query: 389 TIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEALHLFEEMQTK 568
++ LC +GR+D+A+ L I+ ++ + YN LI+G+C A ++++A + M+
Sbjct: 189 ALVFGLCGSGRVDLAYELTLGILRGQVKFNTEIYNTLINGFCRAGRIDKAQAIKTFMRRN 248
Query: 569 GVYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETLIK 715
G PD VT+ A + ++M G D Y L++
Sbjct: 249 GCEPDLVTYNVFLNYCCNELMLEEAVKLIEKMEGNGLEPDGYSYNQLLR 297
Score = 65.9 bits (159), Expect = 2e-08
Identities = 43/172 (25%), Positives = 74/172 (43%)
Frame = +2
Query: 68 YNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTIINAFCKAGRTRKAYKLLGEMG 247
Y + KT V +A + ++ + YN II + A EM
Sbjct: 12 YRTRISNYVKTGLVNEALQVFDKMTQSDCRVFSIDYNRIIGVLIRTSHFDLAEGYYNEMK 71
Query: 248 RKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLFPSLALYTTIIDHLCKNGRID 427
G + + +T++ I K N + LL+ M + + P+ Y ++ LC +D
Sbjct: 72 PVGFSLNSLTYSKFICGLCKVKNFDLISRLLNDMDRVGIVPNFWAYNMYLNLLCSENLVD 131
Query: 428 MAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEALHLFEEMQTKGVYPD 583
+A L + E+ PDVV+Y +ISG C + + A+ ++ M KG+ PD
Sbjct: 132 IALELIRVMGEKGREPDVVSYTIVISGLCRIGRFDNAVEMWHTMIRKGLRPD 183
Score = 58.2 bits (139), Expect = 3e-06
Identities = 41/180 (22%), Positives = 75/180 (41%)
Frame = +2
Query: 173 YNTIINAFCKAGRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMT 352
Y T I+ + K G +A ++ +M + + + +I ++ + +A+ ++M
Sbjct: 12 YRTRISNYVKTGLVNEALQVFDKMTQSDCRVFSIDYNRIIGVLIRTSHFDLAEGYYNEMK 71
Query: 353 KTSLFPSLALYTTIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVN 532
+ Y+ I LCK D+ L +D+ I P+ AYN ++ C+ V+
Sbjct: 72 PVGFSLNSLTYSKFICGLCKVKNFDLISRLLNDMDRVGIVPNFWAYNMYLNLLCSENLVD 131
Query: 533 EALHLFEEMQTKGVYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETLI 712
AL L M KG PD V++ A +W M+ KG D+ + L+
Sbjct: 132 IALELIRVMGEKGREPDVVSYTIVISGLCRIGRFDNAVEMWHTMIRKGLRPDNKACKALV 191
>ref|XP_004504137.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Cicer arietinum]
Length = 516
Score = 288 bits (737), Expect = 1e-75
Identities = 141/246 (57%), Positives = 179/246 (72%)
Frame = +2
Query: 2 LGEGEKLLAKMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNT 181
L E KL+ MERSG+EPD YSYNE+LKG CK N+V++AY+ +V +M+ K + DVVSYNT
Sbjct: 271 LDEVVKLVESMERSGVEPDLYSYNELLKGFCKANQVDRAYLTMVKRMQTKGMCDVVSYNT 330
Query: 182 IINAFCKAGRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTS 361
II AFCKA R + Y+L EM RKGI PDV+TFT+LI+AF KEG S VAK LLDQMT
Sbjct: 331 IIAAFCKARRIERGYELFEEMRRKGIQPDVITFTVLIEAFFKEGGSDVAKKLLDQMTTMG 390
Query: 362 LFPSLALYTTIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEAL 541
+ P L YTTI+D LCK ++D+AH +F D+VE + PDVV+YNALI+G+C A +V +A+
Sbjct: 391 IVPDLIFYTTIVDRLCKAWKVDIAHGVFCDMVENGVSPDVVSYNALINGFCKASRVMDAM 450
Query: 542 HLFEEMQTKGVYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETLIKAI 721
L++EMQ KG+YPD VTF S AC VWDQMMEKGFTLD LSETL+ A+
Sbjct: 451 CLYDEMQDKGLYPDGVTFKLIVGGLIRENKISEACKVWDQMMEKGFTLDRRLSETLVNAM 510
Query: 722 NSKEAS 739
S++ +
Sbjct: 511 KSRDGT 516
Score = 93.2 bits (230), Expect = 9e-17
Identities = 74/301 (24%), Positives = 112/301 (37%), Gaps = 70/301 (23%)
Frame = +2
Query: 20 LLAKMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTIINAFC 199
LL M+ G PD +++N L LC+ N++E A L DVVSYN I+NA C
Sbjct: 102 LLRDMDALGFVPDIWAFNIYLNLLCRENQLETALQLFRTMPLKGREPDVVSYNIIVNALC 161
Query: 200 KAGRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLFPSLA 379
KA R + ++ + KG+ PD L+ GN +A +L+ + + +
Sbjct: 162 KAKRVDEVARVWRSLIEKGLKPDFKVCAALVVGLCSAGNVDLAYELIVGVINGGVKVNCL 221
Query: 380 LYTTIIDHLCKNGRIDMAHS-----------------------------------LFHDI 454
+Y +I C+ GRID A + L +
Sbjct: 222 VYNALISGFCRMGRIDKALAIKGFMSRNGCVPDLVTYNILLNYCCDEVMLDEVVKLVESM 281
Query: 455 VEQRIGPDVVAYNALISGYCNAFQVNEA-------------------------------- 538
+ PD+ +YN L+ G+C A QV+ A
Sbjct: 282 ERSGVEPDLYSYNELLKGFCKANQVDRAYLTMVKRMQTKGMCDVVSYNTIIAAFCKARRI 341
Query: 539 ---LHLFEEMQTKGVYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETL 709
LFEEM+ KG+ PD +TF +A + DQM G D T+
Sbjct: 342 ERGYELFEEMRRKGIQPDVITFTVLIEAFFKEGGSDVAKKLLDQMTTMGIVPDLIFYTTI 401
Query: 710 I 712
+
Sbjct: 402 V 402
Score = 66.2 bits (160), Expect = 1e-08
Identities = 58/269 (21%), Positives = 96/269 (35%), Gaps = 36/269 (13%)
Frame = +2
Query: 17 KLLAKMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIA-DVVSYNTIINA 193
KL +M ++ P S YN + L + + ++ A + + +Y+ I A
Sbjct: 30 KLFDEMSQTNSRPFSIDYNRFIGVLIRHSHLDLAQSYYRRHVIPNGFSLTPFTYSRFIAA 89
Query: 194 FCKAGRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLFPS 373
C LL +M G PD+ F I ++ +E A L M P
Sbjct: 90 LCSVKNFSLIDYLLRDMDALGFVPDIWAFNIYLNLLCRENQLETALQLFRTMPLKGREPD 149
Query: 374 LALYTTIIDHLCKNGRIDMAHSLFHDIVEQRIGPD------------------------- 478
+ Y I++ LCK R+D ++ ++E+ + PD
Sbjct: 150 VVSYNIIVNALCKAKRVDEVARVWRSLIEKGLKPDFKVCAALVVGLCSAGNVDLAYELIV 209
Query: 479 ----------VVAYNALISGYCNAFQVNEALHLFEEMQTKGVYPDEVTFXXXXXXXXXXX 628
+ YNALISG+C ++++AL + M G PD VT+
Sbjct: 210 GVINGGVKVNCLVYNALISGFCRMGRIDKALAIKGFMSRNGCVPDLVTYNILLNYCCDEV 269
Query: 629 XXSLACGVWDQMMEKGFTLDSYLSETLIK 715
+ + M G D Y L+K
Sbjct: 270 MLDEVVKLVESMERSGVEPDLYSYNELLK 298
Score = 57.0 bits (136), Expect = 7e-06
Identities = 44/186 (23%), Positives = 72/186 (38%), Gaps = 1/186 (0%)
Frame = +2
Query: 173 YNTIINAFCKAGRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMT 352
Y + I+ + KAG A KL EM + P + + I ++ + +A+ +
Sbjct: 12 YRSQISYYVKAGLIDTAIKLFDEMSQTNSRPFSIDYNRFIGVLIRHSHLDLAQSYYRRHV 71
Query: 353 KTSLFPSLAL-YTTIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQV 529
+ F Y+ I LC + L D+ PD+ A+N ++ C Q+
Sbjct: 72 IPNGFSLTPFTYSRFIAALCSVKNFSLIDYLLRDMDALGFVPDIWAFNIYLNLLCRENQL 131
Query: 530 NEALHLFEEMQTKGVYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETL 709
AL LF M KG PD V++ VW ++EKG D + L
Sbjct: 132 ETALQLFRTMPLKGREPDVVSYNIIVNALCKAKRVDEVARVWRSLIEKGLKPDFKVCAAL 191
Query: 710 IKAINS 727
+ + S
Sbjct: 192 VVGLCS 197
>gb|ESW31683.1| hypothetical protein PHAVU_002G258900g [Phaseolus vulgaris]
Length = 518
Score = 286 bits (733), Expect = 4e-75
Identities = 135/246 (54%), Positives = 178/246 (72%)
Frame = +2
Query: 2 LGEGEKLLAKMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNT 181
L E +L+ MERSG+EPD YSYNE+LK CK N V++AY++LV +M+ K + DVVSYNT
Sbjct: 273 LDEALRLVETMERSGVEPDFYSYNELLKCFCKANMVDRAYLMLVERMQTKGMCDVVSYNT 332
Query: 182 IINAFCKAGRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTS 361
+I AFCK RTR+ Y+L EM KGI PD+VTF ILIDAFL+EG+ V K LLD+MT+
Sbjct: 333 LITAFCKVRRTRRGYELFEEMCGKGIRPDMVTFNILIDAFLREGSIQVVKKLLDEMTRLG 392
Query: 362 LFPSLALYTTIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEAL 541
+ P YT ++DHLCK G++D A S+F D+VE + PDV++YNAL++G+C A +V +A+
Sbjct: 393 ILPDRIFYTAVVDHLCKTGKVDTADSVFRDMVENGVNPDVISYNALVNGFCKASRVMDAM 452
Query: 542 HLFEEMQTKGVYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETLIKAI 721
L++EMQ G+YPDEVTF SLAC VWDQMMEKG TLD +LSETL+ AI
Sbjct: 453 RLYDEMQRNGLYPDEVTFKLIVGGLIRGKKLSLACRVWDQMMEKGLTLDKHLSETLVNAI 512
Query: 722 NSKEAS 739
S++ +
Sbjct: 513 QSRDGA 518
Score = 115 bits (288), Expect = 2e-23
Identities = 62/196 (31%), Positives = 103/196 (52%)
Frame = +2
Query: 8 EGEKLLAKMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTII 187
E ++ + G+ PD + ++ GLC RV+ AY L+V ++ +++ YN +I
Sbjct: 170 EAARVWRGLTGKGLSPDFKACVALVVGLCGGGRVDLAYELVVGVIKGGVKVNILVYNALI 229
Query: 188 NAFCKAGRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLF 367
+ FC+ GR KA K+ M R G PD+VT+ L++ EG A L++ M ++ +
Sbjct: 230 DGFCRMGRVDKAMKIKAFMSRNGCVPDLVTYNTLLNYCCDEGMLDEALRLVETMERSGVE 289
Query: 368 PSLALYTTIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEALHL 547
P Y ++ CK +D A+ + + ++ + DVV+YN LI+ +C + L
Sbjct: 290 PDFYSYNELLKCFCKANMVDRAYLMLVERMQTKGMCDVVSYNTLITAFCKVRRTRRGYEL 349
Query: 548 FEEMQTKGVYPDEVTF 595
FEEM KG+ PD VTF
Sbjct: 350 FEEMCGKGIRPDMVTF 365
Score = 103 bits (257), Expect = 7e-20
Identities = 61/188 (32%), Positives = 96/188 (51%)
Frame = +2
Query: 20 LLAKMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTIINAFC 199
LL M G PD +++N L LC+ NR+E A L + DVVSY I++A C
Sbjct: 104 LLLDMHALGFVPDIWAFNTYLSFLCRHNRLETALELFHSMPSEGREPDVVSYTIIVDALC 163
Query: 200 KAGRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLFPSLA 379
KA R +A ++ + KG++PD L+ G +A +L+ + K + ++
Sbjct: 164 KAQRYDEAARVWRGLTGKGLSPDFKACVALVVGLCGGGRVDLAYELVVGVIKGGVKVNIL 223
Query: 380 LYTTIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEALHLFEEM 559
+Y +ID C+ GR+D A + + PD+V YN L++ C+ ++EAL L E M
Sbjct: 224 VYNALIDGFCRMGRVDKAMKIKAFMSRNGCVPDLVTYNTLLNYCCDEGMLDEALRLVETM 283
Query: 560 QTKGVYPD 583
+ GV PD
Sbjct: 284 ERSGVEPD 291
Score = 95.5 bits (236), Expect = 2e-17
Identities = 57/219 (26%), Positives = 102/219 (46%), Gaps = 1/219 (0%)
Frame = +2
Query: 62 YSYNEVLKGLCKT-NRVEKAYMLLVNKMEAKEIADVVSYNTIINAFCKAGRTRKAYKLLG 238
++Y+ + LC N + + LL++ + D+ ++NT ++ C+ R A +L
Sbjct: 82 FTYSRFISALCSAPNNLPLIHDLLLDMHALGFVPDIWAFNTYLSFLCRHNRLETALELFH 141
Query: 239 EMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLFPSLALYTTIIDHLCKNG 418
M +G PDVV++TI++DA K A + +T L P ++ LC G
Sbjct: 142 SMPSEGREPDVVSYTIIVDALCKAQRYDEAARVWRGLTGKGLSPDFKACVALVVGLCGGG 201
Query: 419 RIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEALHLFEEMQTKGVYPDEVTFX 598
R+D+A+ L +++ + +++ YNALI G+C +V++A+ + M G PD VT+
Sbjct: 202 RVDLAYELVVGVIKGGVKVNILVYNALIDGFCRMGRVDKAMKIKAFMSRNGCVPDLVTYN 261
Query: 599 XXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETLIK 715
A + + M G D Y L+K
Sbjct: 262 TLLNYCCDEGMLDEALRLVETMERSGVEPDFYSYNELLK 300
>ref|XP_006483972.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like isoform X1 [Citrus sinensis]
gi|568860947|ref|XP_006483973.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like isoform X2 [Citrus sinensis]
Length = 517
Score = 282 bits (722), Expect = 8e-74
Identities = 141/246 (57%), Positives = 183/246 (74%)
Frame = +2
Query: 2 LGEGEKLLAKMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNT 181
L E EKL+ +ME G+EPD YSYN++LKGLC +N+++KAYM +V KMEAK + D VSYNT
Sbjct: 270 LDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNT 329
Query: 182 IINAFCKAGRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTS 361
+I AFCK G+TR+AYKL EM R+GI DVVTFTILI AFL+EG+S +A+ LL+QM +
Sbjct: 330 VIEAFCKGGQTRRAYKLFEEMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMN 389
Query: 362 LFPSLALYTTIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEAL 541
L P LYTTIID LCK+ I A+ +F D+VEQ I PDV++YNALI+G C + +V+EA+
Sbjct: 390 LSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAM 449
Query: 542 HLFEEMQTKGVYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETLIKAI 721
HL+EEMQ +G +PDEVTF LAC +WDQMMEKGFTLD +S LI+AI
Sbjct: 450 HLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEAI 509
Query: 722 NSKEAS 739
+ ++A+
Sbjct: 510 HLQDAA 515
Score = 112 bits (281), Expect = 1e-22
Identities = 66/230 (28%), Positives = 114/230 (49%)
Frame = +2
Query: 32 MERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTIINAFCKAGR 211
M +G++PD+ + ++ GLC +V+ AY L V M+ K V+ YN +I+ FC+ GR
Sbjct: 175 MIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGR 234
Query: 212 TRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLFPSLALYTT 391
+A + M R G PD+VT+ +++ + E A+ L+ +M + P + Y
Sbjct: 235 ICRAMAIKSFMKRNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQ 294
Query: 392 IIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEALHLFEEMQTKG 571
++ LC + ++D A+ +E + D V+YN +I +C Q A LFEEM+ +G
Sbjct: 295 LLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFEEMRRRG 354
Query: 572 VYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETLIKAI 721
+ D VTF ++A + +QM + D L T+I +
Sbjct: 355 IELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCL 404
Score = 92.0 bits (227), Expect = 2e-16
Identities = 62/231 (26%), Positives = 106/231 (45%), Gaps = 1/231 (0%)
Frame = +2
Query: 29 KMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTIINAFCKAG 208
KM G EPD +Y V+ GLCK + +KA + +E D + ++ C G
Sbjct: 139 KMVSKGREPDFVTYTIVIDGLCKAKKFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDG 198
Query: 209 RTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLFPSLALYT 388
+ AY+L + + V+ + LI F + G A + M + P L Y
Sbjct: 199 KVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRICRAMAIKSFMKRNGCEPDLVTYN 258
Query: 389 TIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEA-LHLFEEMQT 565
I+++ C +D A L ++ I PDV +YN L+ G CN+ Q+++A + + ++M+
Sbjct: 259 AILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEA 318
Query: 566 KGVYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETLIKA 718
KG+ D+V++ A ++++M +G LD LIKA
Sbjct: 319 KGL-RDKVSYNTVIEAFCKGGQTRRAYKLFEEMRRRGIELDVVTFTILIKA 368
Score = 88.2 bits (217), Expect = 3e-15
Identities = 51/189 (26%), Positives = 91/189 (48%)
Frame = +2
Query: 29 KMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTIINAFCKAG 208
+M G ++Y+ + GLC+ +LL N + + D+ ++N +N
Sbjct: 69 QMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLGYLPDIWAFNIYLNLLFHEN 128
Query: 209 RTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLFPSLALYT 388
R A ++ +M KG PD VT+TI+ID K A + M + + P
Sbjct: 129 RIDLALEVFHKMVSKGREPDFVTYTIVIDGLCKAKKFDKAVQAWEHMIENGIKPDNKACA 188
Query: 389 TIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEALHLFEEMQTK 568
++ LC +G++D+A+ L ++ ++ V+ YNALISG+C ++ A+ + M+
Sbjct: 189 ALVVGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRICRAMAIKSFMKRN 248
Query: 569 GVYPDEVTF 595
G PD VT+
Sbjct: 249 GCEPDLVTY 257
Score = 88.2 bits (217), Expect = 3e-15
Identities = 54/192 (28%), Positives = 92/192 (47%)
Frame = +2
Query: 20 LLAKMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTIINAFC 199
LL M++ G PD +++N L L NR++ A + + D V+Y +I+ C
Sbjct: 101 LLDNMDKLGYLPDIWAFNIYLNLLFHENRIDLALEVFHKMVSKGREPDFVTYTIVIDGLC 160
Query: 200 KAGRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLFPSLA 379
KA + KA + M GI PD L+ +G +A +L K + +
Sbjct: 161 KAKKFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKVEFGVL 220
Query: 380 LYTTIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEALHLFEEM 559
+Y +I C+ GRI A ++ + PD+V YNA+++ YC+ ++EA L EM
Sbjct: 221 IYNALISGFCRTGRICRAMAIKSFMKRNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEM 280
Query: 560 QTKGVYPDEVTF 595
++ G+ PD ++
Sbjct: 281 ESCGIEPDVYSY 292
Score = 64.7 bits (156), Expect = 4e-08
Identities = 41/172 (23%), Positives = 71/172 (41%)
Frame = +2
Query: 68 YNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTIINAFCKAGRTRKAYKLLGEMG 247
Y + L K +++A + ++ + YN I + R +M
Sbjct: 12 YRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMH 71
Query: 248 RKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLFPSLALYTTIIDHLCKNGRID 427
G + T++ I + N + LLD M K P + + ++ L RID
Sbjct: 72 PLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLGYLPDIWAFNIYLNLLFHENRID 131
Query: 428 MAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEALHLFEEMQTKGVYPD 583
+A +FH +V + PD V Y +I G C A + ++A+ +E M G+ PD
Sbjct: 132 LALEVFHKMVSKGREPDFVTYTIVIDGLCKAKKFDKAVQAWEHMIENGIKPD 183
>ref|XP_006438222.1| hypothetical protein CICLE_v10031251mg [Citrus clementina]
gi|557540418|gb|ESR51462.1| hypothetical protein
CICLE_v10031251mg [Citrus clementina]
Length = 517
Score = 282 bits (722), Expect = 8e-74
Identities = 141/246 (57%), Positives = 183/246 (74%)
Frame = +2
Query: 2 LGEGEKLLAKMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNT 181
L E EKL+ +ME G+EPD YSYN++LKGLC +N+++KAYM +V KMEAK + D VSYNT
Sbjct: 270 LDEAEKLVMEMESCGIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNT 329
Query: 182 IINAFCKAGRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTS 361
+I AFCK G+TR+AYKL EM R+GI DVVTFTILI AFL+EG+S +A+ LL+QM +
Sbjct: 330 VIEAFCKGGQTRRAYKLFEEMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMN 389
Query: 362 LFPSLALYTTIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEAL 541
L P LYTTIID LCK+ I A+ +F D+VEQ I PDV++YNALI+G C + +V+EA+
Sbjct: 390 LSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAM 449
Query: 542 HLFEEMQTKGVYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETLIKAI 721
HL+EEMQ +G +PDEVTF LAC +WDQMMEKGFTLD +S LI+AI
Sbjct: 450 HLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIEAI 509
Query: 722 NSKEAS 739
+ ++A+
Sbjct: 510 HLQDAA 515
Score = 113 bits (283), Expect = 7e-23
Identities = 66/230 (28%), Positives = 114/230 (49%)
Frame = +2
Query: 32 MERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTIINAFCKAGR 211
M +G++PD+ + ++ GLC +V+ AY V M+ K V+ YN +I+ FC+ GR
Sbjct: 175 MIENGIKPDNKACAALVVGLCGDGKVDLAYERTVGAMKGKVEFGVLIYNALISGFCRTGR 234
Query: 212 TRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLFPSLALYTT 391
R+A + M R G PD+VT+ +++ + E A+ L+ +M + P + Y
Sbjct: 235 IRRAMAIKSFMKRNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQ 294
Query: 392 IIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEALHLFEEMQTKG 571
++ LC + ++D A+ +E + D V+YN +I +C Q A LFEEM+ +G
Sbjct: 295 LLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVIEAFCKGGQTRRAYKLFEEMRRRG 354
Query: 572 VYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETLIKAI 721
+ D VTF ++A + +QM + D L T+I +
Sbjct: 355 IELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCL 404
Score = 87.0 bits (214), Expect = 7e-15
Identities = 50/189 (26%), Positives = 90/189 (47%)
Frame = +2
Query: 29 KMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTIINAFCKAG 208
+M G ++Y+ + GLC+ +LL N + + D+ ++N +N
Sbjct: 69 QMHPLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLGYLPDIWAFNIYLNLLFHEN 128
Query: 209 RTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLFPSLALYT 388
R A ++ +M KG PD VT+TI+ID K A + M + + P
Sbjct: 129 RIDLALEVFHKMVSKGREPDFVTYTIVIDGLCKAKKFDKAVQAWEHMIENGIKPDNKACA 188
Query: 389 TIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEALHLFEEMQTK 568
++ LC +G++D+A+ ++ ++ V+ YNALISG+C ++ A+ + M+
Sbjct: 189 ALVVGLCGDGKVDLAYERTVGAMKGKVEFGVLIYNALISGFCRTGRIRRAMAIKSFMKRN 248
Query: 569 GVYPDEVTF 595
G PD VT+
Sbjct: 249 GCEPDLVTY 257
Score = 86.3 bits (212), Expect = 1e-14
Identities = 53/192 (27%), Positives = 91/192 (47%)
Frame = +2
Query: 20 LLAKMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTIINAFC 199
LL M++ G PD +++N L L NR++ A + + D V+Y +I+ C
Sbjct: 101 LLDNMDKLGYLPDIWAFNIYLNLLFHENRIDLALEVFHKMVSKGREPDFVTYTIVIDGLC 160
Query: 200 KAGRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLFPSLA 379
KA + KA + M GI PD L+ +G +A + K + +
Sbjct: 161 KAKKFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYERTVGAMKGKVEFGVL 220
Query: 380 LYTTIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEALHLFEEM 559
+Y +I C+ GRI A ++ + PD+V YNA+++ YC+ ++EA L EM
Sbjct: 221 IYNALISGFCRTGRIRRAMAIKSFMKRNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEM 280
Query: 560 QTKGVYPDEVTF 595
++ G+ PD ++
Sbjct: 281 ESCGIEPDVYSY 292
Score = 64.7 bits (156), Expect = 4e-08
Identities = 41/172 (23%), Positives = 71/172 (41%)
Frame = +2
Query: 68 YNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTIINAFCKAGRTRKAYKLLGEMG 247
Y + L K +++A + ++ + YN I + R +M
Sbjct: 12 YRAQISNLVKAGLIDQAVHVFDEMTQSNCRVFSIDYNRFIGVLIRHSRFDLVQFYYQQMH 71
Query: 248 RKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLFPSLALYTTIIDHLCKNGRID 427
G + T++ I + N + LLD M K P + + ++ L RID
Sbjct: 72 PLGFSLTPFTYSRFISGLCEVKNFTLINILLDNMDKLGYLPDIWAFNIYLNLLFHENRID 131
Query: 428 MAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEALHLFEEMQTKGVYPD 583
+A +FH +V + PD V Y +I G C A + ++A+ +E M G+ PD
Sbjct: 132 LALEVFHKMVSKGREPDFVTYTIVIDGLCKAKKFDKAVQAWEHMIENGIKPD 183
>ref|XP_004135492.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Cucumis sativus]
gi|449494962|ref|XP_004159696.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Cucumis sativus]
Length = 514
Score = 279 bits (713), Expect = 9e-73
Identities = 140/240 (58%), Positives = 174/240 (72%)
Frame = +2
Query: 17 KLLAKMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTIINAF 196
K + KMER GMEPD YSYN++LKGLCK NR++KAY L+ N M K + D VSYNT+I A
Sbjct: 275 KSMKKMERIGMEPDVYSYNQLLKGLCKANRLDKAYKLM-NTMWEKGLCDTVSYNTVIGAL 333
Query: 197 CKAGRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLFPSL 376
CK+ TRKAY+L EMG+K +APDV TF LI AFL EG+ +AK LL MT+T L P L
Sbjct: 334 CKSFATRKAYRLFEEMGQKDVAPDVGTFATLIKAFLIEGSPHIAKGLLQTMTQTVLIPDL 393
Query: 377 ALYTTIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEALHLFEE 556
YTT++D+ CK +I+MA +F D++E I PDVV+YNALI+G C A +V+EA+ L+EE
Sbjct: 394 IFYTTVVDYFCKTRKIEMAQGVFRDMIEIGISPDVVSYNALINGLCKASKVSEAMLLYEE 453
Query: 557 MQTKGVYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETLIKAINSKEA 736
MQ +G YPDEVTF SLAC VWDQMMEKG+TLD +LSETLIKAI S++A
Sbjct: 454 MQIRGCYPDEVTFKLIIGGLLRKKELSLACQVWDQMMEKGYTLDKFLSETLIKAIRSRDA 513
Score = 83.6 bits (205), Expect = 7e-14
Identities = 59/235 (25%), Positives = 109/235 (46%)
Frame = +2
Query: 17 KLLAKMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTIINAF 196
+LL M++ G PD +++N L L + N +E A + DVV+Y I++
Sbjct: 100 RLLEDMKQLGYLPDIWAFNIYLNLLFRENLLELALKFFDEMVAKGREPDVVTYTIIVDRL 159
Query: 197 CKAGRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLFPSL 376
CKA + KA + M KG++PD+ T L+ G +A +L K + +
Sbjct: 160 CKAKQYDKAVEFWRCMVNKGLSPDMKACTALVVGLCDGGKVDLAYELTVGEMKGEMKFNN 219
Query: 377 ALYTTIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEALHLFEE 556
++ +++ CK+GRI A ++ + + PD++ YN L++ +C+ + A ++
Sbjct: 220 LIFNSLMSGFCKSGRISKALAIKSFMSKHGCEPDLITYNILLNFFCDGLMLELAGKSMKK 279
Query: 557 MQTKGVYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETLIKAI 721
M+ G+ PD ++ A + + M EKG D+ T+I A+
Sbjct: 280 MERIGMEPDVYSYNQLLKGLCKANRLDKAYKLMNTMWEKGL-CDTVSYNTVIGAL 333
Score = 71.6 bits (174), Expect = 3e-10
Identities = 59/275 (21%), Positives = 104/275 (37%), Gaps = 35/275 (12%)
Frame = +2
Query: 2 LGEGEKLLAKMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNT 181
+ E ++ +M +S S YN + L +R + A + +Y+
Sbjct: 25 IDEAIRIFDEMTQSDCPVTSRDYNRFIGVLISRSRFDLAESYYSRMIPQGFSLTPFTYSR 84
Query: 182 IINAFCKAGRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTS 361
I+A C+ +LL +M + G PD+ F I ++ +E +A D+M
Sbjct: 85 FISALCEIKNFGLIGRLLEDMKQLGYLPDIWAFNIYLNLLFRENLLELALKFFDEMVAKG 144
Query: 362 LFPSLALYTTIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVA------------------ 487
P + YT I+D LCK + D A + +V + + PD+ A
Sbjct: 145 REPDVVTYTIIVDRLCKAKQYDKAVEFWRCMVNKGLSPDMKACTALVVGLCDGGKVDLAY 204
Query: 488 -----------------YNALISGYCNAFQVNEALHLFEEMQTKGVYPDEVTFXXXXXXX 616
+N+L+SG+C + ++++AL + M G PD +T+
Sbjct: 205 ELTVGEMKGEMKFNNLIFNSLMSGFCKSGRISKALAIKSFMSKHGCEPDLITYNILLNFF 264
Query: 617 XXXXXXSLACGVWDQMMEKGFTLDSYLSETLIKAI 721
LA +M G D Y L+K +
Sbjct: 265 CDGLMLELAGKSMKKMERIGMEPDVYSYNQLLKGL 299
>ref|XP_002312667.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222852487|gb|EEE90034.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 512
Score = 278 bits (712), Expect = 1e-72
Identities = 140/240 (58%), Positives = 169/240 (70%)
Frame = +2
Query: 8 EGEKLLAKMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTII 187
E KLL KME S +EPD YSYN++LK CK N +KAY+ +V KM K DVVSYNTII
Sbjct: 273 EAVKLLKKMECSAIEPDVYSYNQLLKAHCKANHPDKAYLFMVTKMVPKGFCDVVSYNTII 332
Query: 188 NAFCKAGRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLF 367
AFC R+AYKL EMGRKGIAPDVVTFTILI AFL+EGNS +AK LLD M L
Sbjct: 333 KAFCSISNNRRAYKLFEEMGRKGIAPDVVTFTILIKAFLREGNSDMAKKLLDLMAGMGLL 392
Query: 368 PSLALYTTIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEALHL 547
P YTTIIDH CK+G+++MAHS+F D+VE+ I PDVV+YNALI+G+C + +V E +HL
Sbjct: 393 PDRIFYTTIIDHHCKSGKVEMAHSIFCDMVEKGITPDVVSYNALINGFCKSLRVGEVMHL 452
Query: 548 FEEMQTKGVYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETLIKAINS 727
+E+M +G +PDEVT+ S AC VWDQMME+G TLD +SE LI AI S
Sbjct: 453 YEQMLQRGSFPDEVTYKLIIGALVRENKLSDACRVWDQMMERGLTLDRGISEMLINAIQS 512
Score = 104 bits (260), Expect = 3e-20
Identities = 68/225 (30%), Positives = 108/225 (48%), Gaps = 2/225 (0%)
Frame = +2
Query: 44 GMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEA--KEIADVVSYNTIINAFCKAGRTR 217
G+ PD+ + + GLC +V+ AY L++ + E++ +V YN +I+ FC+AGR
Sbjct: 179 GIRPDNKACVALAVGLCDGGQVDLAYELIIGVISGGLSEVSTLV-YNALISGFCRAGRID 237
Query: 218 KAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLFPSLALYTTII 397
KA ++ M R G PD+VT+ +L++ E A LL +M +++ P + Y ++
Sbjct: 238 KALAMVSFMSRTGCKPDLVTYNVLLNYCCNEFMFEEAVKLLKKMECSAIEPDVYSYNQLL 297
Query: 398 DHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEALHLFEEMQTKGVY 577
CK D A+ + + DVV+YN +I +C+ A LFEEM KG+
Sbjct: 298 KAHCKANHPDKAYLFMVTKMVPKGFCDVVSYNTIIKAFCSISNNRRAYKLFEEMGRKGIA 357
Query: 578 PDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETLI 712
PD VTF +A + D M G D T+I
Sbjct: 358 PDVVTFTILIKAFLREGNSDMAKKLLDLMAGMGLLPDRIFYTTII 402
Score = 85.1 bits (209), Expect = 3e-14
Identities = 57/195 (29%), Positives = 90/195 (46%), Gaps = 1/195 (0%)
Frame = +2
Query: 14 EKLLAKMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTIINA 193
+ LL ME+ PD +++N L L + NR E A + +E DVV++ II+
Sbjct: 99 DNLLKDMEKLHCVPDIWAFNIYLNLLFRENREESALEVFGRMVERGREPDVVTFTIIIDG 158
Query: 194 FCKAGRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLFP- 370
CK + A + M KGI PD L G +A +L+ + L
Sbjct: 159 LCKMKKFDAAVQFWLNMLDKGIRPDNKACVALAVGLCDGGQVDLAYELIIGVISGGLSEV 218
Query: 371 SLALYTTIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEALHLF 550
S +Y +I C+ GRID A ++ + PD+V YN L++ CN F EA+ L
Sbjct: 219 STLVYNALISGFCRAGRIDKALAMVSFMSRTGCKPDLVTYNVLLNYCCNEFMFEEAVKLL 278
Query: 551 EEMQTKGVYPDEVTF 595
++M+ + PD ++
Sbjct: 279 KKMECSAIEPDVYSY 293
Score = 65.9 bits (159), Expect = 2e-08
Identities = 51/229 (22%), Positives = 89/229 (38%), Gaps = 36/229 (15%)
Frame = +2
Query: 17 KLLAKMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTIINAF 196
K+ +M S YN + L + +R + A+ +Y+ I+
Sbjct: 30 KVFDEMTLSECRVFGIDYNRFIGVLIRHSRFDLAHHYYSKMAPLGFSLSSFTYSRFISGL 89
Query: 197 CKAGRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLFPSL 376
C+ LL +M + PD+ F I ++ +E A ++ +M + P +
Sbjct: 90 CQTKEFTFIDNLLKDMEKLHCVPDIWAFNIYLNLLFRENREESALEVFGRMVERGREPDV 149
Query: 377 ALYTTIIDHLCKNGRIDMAHSLFHDIVEQRIGPD-------------------------- 478
+T IID LCK + D A + +++++ I PD
Sbjct: 150 VTFTIIIDGLCKMKKFDAAVQFWLNMLDKGIRPDNKACVALAVGLCDGGQVDLAYELIIG 209
Query: 479 ----------VVAYNALISGYCNAFQVNEALHLFEEMQTKGVYPDEVTF 595
+ YNALISG+C A ++++AL + M G PD VT+
Sbjct: 210 VISGGLSEVSTLVYNALISGFCRAGRIDKALAMVSFMSRTGCKPDLVTY 258
>ref|XP_006417164.1| hypothetical protein EUTSA_v10007381mg [Eutrema salsugineum]
gi|557094935|gb|ESQ35517.1| hypothetical protein
EUTSA_v10007381mg [Eutrema salsugineum]
Length = 517
Score = 255 bits (652), Expect = 1e-65
Identities = 128/245 (52%), Positives = 171/245 (69%)
Frame = +2
Query: 2 LGEGEKLLAKMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNT 181
L + E ++++M RSG++PD+YSYN++LK C+ +K Y L+V +ME + DVVSY+T
Sbjct: 271 LKKAEGVMSEMVRSGIQPDAYSYNQLLKRHCRVGVPDKCYSLMVKEMEPRGFCDVVSYST 330
Query: 182 IINAFCKAGRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTS 361
+I FC+A TRKAYKL EM +KGI +VVT+T LI AFL+EGNS VAK LLDQMT+
Sbjct: 331 LIETFCRASNTRKAYKLFEEMRQKGIVTNVVTYTSLIKAFLREGNSSVAKKLLDQMTELG 390
Query: 362 LFPSLALYTTIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEAL 541
L P YTTI+DHLCK+G +D A+ +F+D++E I PD ++YNALISG C + +V EA+
Sbjct: 391 LSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHGITPDAISYNALISGLCRSCRVTEAM 450
Query: 542 HLFEEMQTKGVYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETLIKAI 721
LF++MQ+K PDE+TF S A VWDQMM+KGFTLD +S+TLIKA
Sbjct: 451 KLFKDMQSKECCPDELTFKFIIGGLIREKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKAS 510
Query: 722 NSKEA 736
S A
Sbjct: 511 CSLSA 515
Score = 124 bits (310), Expect = 5e-26
Identities = 69/229 (30%), Positives = 120/229 (52%), Gaps = 1/229 (0%)
Frame = +2
Query: 29 KMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIA-DVVSYNTIINAFCKA 205
+M RSG+ PD+ + ++ GLC +V+ AY ++ ++++ + V YN +I+ FC+A
Sbjct: 174 EMIRSGINPDNKACASLVVGLCDARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCRA 233
Query: 206 GRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLFPSLALY 385
GR KA L M + G +PD+VT+ +L++ + A+ ++ +M ++ + P Y
Sbjct: 234 GRIEKAEALKSFMSKSGCSPDLVTYNVLLNYYYDHNMLKKAEGVMSEMVRSGIQPDAYSY 293
Query: 386 TTIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEALHLFEEMQT 565
++ C+ G D +SL +E R DVV+Y+ LI +C A +A LFEEM+
Sbjct: 294 NQLLKRHCRVGVPDKCYSLMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYKLFEEMRQ 353
Query: 566 KGVYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETLI 712
KG+ + VT+ S+A + DQM E G + D T++
Sbjct: 354 KGIVTNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTIL 402
Score = 100 bits (249), Expect = 6e-19
Identities = 64/235 (27%), Positives = 108/235 (45%), Gaps = 1/235 (0%)
Frame = +2
Query: 14 EKLLAKMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTIINA 193
E L M G ++Y+ + GLCK + + LL + I D+ ++N ++
Sbjct: 64 EALYRDMTPMGFSLIPFTYSRFISGLCKVRKFDLIDALLRDMETLGYIPDIWAFNIYLDL 123
Query: 194 FCKAGRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLFPS 373
C+ A + M R+G PDVV++TILI+ + G A + ++M ++ + P
Sbjct: 124 LCREREVGFAVQTFFCMVRRGREPDVVSYTILINGLFRAGKVTDAVEFWNEMIRSGINPD 183
Query: 374 LALYTTIIDHLCKNGRIDMAHSLF-HDIVEQRIGPDVVAYNALISGYCNAFQVNEALHLF 550
+++ LC ++D+A+ + +I R+ V YNALISG+C A ++ +A L
Sbjct: 184 NKACASLVVGLCDARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCRAGRIEKAEALK 243
Query: 551 EEMQTKGVYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETLIK 715
M G PD VT+ A GV +M+ G D+Y L+K
Sbjct: 244 SFMSKSGCSPDLVTYNVLLNYYYDHNMLKKAEGVMSEMVRSGIQPDAYSYNQLLK 298
Score = 58.5 bits (140), Expect = 3e-06
Identities = 42/173 (24%), Positives = 68/173 (39%)
Frame = +2
Query: 65 SYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTIINAFCKAGRTRKAYKLLGEM 244
+Y + L K+ ++ A + + YN I K R A L +M
Sbjct: 11 AYRSRIAYLVKSGMIDNAVQVFDELRHSSFRVFSSDYNRFIGVLVKESRFELAEALYRDM 70
Query: 245 GRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLFPSLALYTTIIDHLCKNGRI 424
G + T++ I K + LL M P + + +D LC+ +
Sbjct: 71 TPMGFSLIPFTYSRFISGLCKVRKFDLIDALLRDMETLGYIPDIWAFNIYLDLLCREREV 130
Query: 425 DMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEALHLFEEMQTKGVYPD 583
A F +V + PDVV+Y LI+G A +V +A+ + EM G+ PD
Sbjct: 131 GFAVQTFFCMVRRGREPDVVSYTILINGLFRAGKVTDAVEFWNEMIRSGINPD 183
>ref|XP_006836595.1| hypothetical protein AMTR_s00131p00098210 [Amborella trichopoda]
gi|548839134|gb|ERM99448.1| hypothetical protein
AMTR_s00131p00098210 [Amborella trichopoda]
Length = 704
Score = 254 bits (649), Expect = 2e-65
Identities = 118/244 (48%), Positives = 168/244 (68%)
Frame = +2
Query: 8 EGEKLLAKMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTII 187
E EKL+ KM+R G+ PD YSYN +LKG C N+++KAY+LLV+KME+KEI DVVSYNTI+
Sbjct: 435 EAEKLIEKMKRYGINPDKYSYNILLKGYCNANQLDKAYLLLVDKMESKEIFDVVSYNTIV 494
Query: 188 NAFCKAGRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLF 367
A C+ R AYKL+ EM KGI+PDVVT++ LI+ F +EG+ +A++L +Q+
Sbjct: 495 GALCRVRRAGTAYKLMEEMSMKGISPDVVTYSSLINGFFREGHIDLAEELFNQILDVGFV 554
Query: 368 PSLALYTTIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEALHL 547
P + YTT+ DHLCK+GR++ A SLF ++++ + PD+++YNALI G C AF V+EA+ +
Sbjct: 555 PDVVTYTTMFDHLCKSGRVEQARSLFFNMIKNGVRPDMISYNALIDGLCKAFMVSEAVEV 614
Query: 548 FEEMQTKGVYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETLIKAINS 727
+EEM G PDEVT+ +AC +WDQMMEKG LD+ + E L+ ++
Sbjct: 615 YEEMVHGGCEPDEVTYHLLIGGLLRDEKLGMACKIWDQMMEKGLVLDTVVGEALVDSVRM 674
Query: 728 KEAS 739
K A+
Sbjct: 675 KNAT 678
Score = 116 bits (290), Expect = 1e-23
Identities = 65/220 (29%), Positives = 108/220 (49%)
Frame = +2
Query: 29 KMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTIINAFCKAG 208
+M R G EPD + ++ GLCK ++V+ AY + + + YN +IN FC G
Sbjct: 337 EMIRKGFEPDLIACGTLVFGLCKHSKVDLAYGVAMRVITRGIALTTPVYNALINGFCSIG 396
Query: 209 RTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLFPSLALYT 388
R KA ++ M R G PD+VT+ +++ E A+ L+++M + + P Y
Sbjct: 397 RIDKAQAIVAFMRRNGCTPDLVTYNTMLNYCCNENLVFEAEKLIEKMKRYGINPDKYSYN 456
Query: 389 TIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEALHLFEEMQTK 568
++ C ++D A+ L D +E + DVV+YN ++ C + A L EEM K
Sbjct: 457 ILLKGYCNANQLDKAYLLLVDKMESKEIFDVVSYNTIVGALCRVRRAGTAYKLMEEMSMK 516
Query: 569 GVYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLD 688
G+ PD VT+ LA +++Q+++ GF D
Sbjct: 517 GISPDVVTYSSLINGFFREGHIDLAEELFNQILDVGFVPD 556
Score = 102 bits (254), Expect = 2e-19
Identities = 58/194 (29%), Positives = 102/194 (52%)
Frame = +2
Query: 14 EKLLAKMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTIINA 193
EKLL+ + + G PD ++YN+ + LC+ N+++ A LL + M + + V+Y IIN
Sbjct: 263 EKLLSDIYKMGYAPDIWAYNKYMNSLCRLNKLDLALTLLED-MTRRIKPNPVTYTIIING 321
Query: 194 FCKAGRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLFPS 373
C+ R + A ++ EM RKG PD++ L+ K +A + ++ + +
Sbjct: 322 LCRKERFQSALEVWNEMIRKGFEPDLIACGTLVFGLCKHSKVDLAYGVAMRVITRGIALT 381
Query: 374 LALYTTIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEALHLFE 553
+Y +I+ C GRID A ++ + PD+V YN +++ CN V EA L E
Sbjct: 382 TPVYNALINGFCSIGRIDKAQAIVAFMRRNGCTPDLVTYNTMLNYCCNENLVFEAEKLIE 441
Query: 554 EMQTKGVYPDEVTF 595
+M+ G+ PD+ ++
Sbjct: 442 KMKRYGINPDKYSY 455
Score = 95.9 bits (237), Expect = 1e-17
Identities = 68/228 (29%), Positives = 109/228 (47%), Gaps = 5/228 (2%)
Frame = +2
Query: 68 YNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTIINAFCKAGRTRKAYKLLGEMG 247
YN ++ G C R++KA ++ D+V+YNT++N C +A KL+ +M
Sbjct: 385 YNALINGFCSIGRIDKAQAIVAFMRRNGCTPDLVTYNTMLNYCCNENLVFEAEKLIEKMK 444
Query: 248 RKGIAPDVVTFTILIDAFLKEGNSIVAKDLL-DQMTKTSLFPSLALYTTIIDHLCKNGRI 424
R GI PD ++ IL+ + A LL D+M +F ++ Y TI+ LC+ R
Sbjct: 445 RYGINPDKYSYNILLKGYCNANQLDKAYLLLVDKMESKEIFDVVS-YNTIVGALCRVRRA 503
Query: 425 DMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEALHLFEEMQTKGVYPDEVTFXXX 604
A+ L ++ + I PDVV Y++LI+G+ ++ A LF ++ G PD VT+
Sbjct: 504 GTAYKLMEEMSMKGISPDVVTYSSLINGFFREGHIDLAEELFNQILDVGFVPDVVTYTTM 563
Query: 605 XXXXXXXXXXSLACGVWDQMMEKGFTLD--SY--LSETLIKAINSKEA 736
A ++ M++ G D SY L + L KA EA
Sbjct: 564 FDHLCKSGRVEQARSLFFNMIKNGVRPDMISYNALIDGLCKAFMVSEA 611
Score = 81.3 bits (199), Expect = 4e-13
Identities = 43/166 (25%), Positives = 83/166 (50%)
Frame = +2
Query: 5 GEGEKLLAKMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTI 184
G KL+ +M G+ PD +Y+ ++ G + ++ A L ++ + DVV+Y T+
Sbjct: 504 GTAYKLMEEMSMKGISPDVVTYSSLINGFFREGHIDLAEELFNQILDVGFVPDVVTYTTM 563
Query: 185 INAFCKAGRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSL 364
+ CK+GR +A L M + G+ PD++++ LID K A ++ ++M
Sbjct: 564 FDHLCKSGRVEQARSLFFNMIKNGVRPDMISYNALIDGLCKAFMVSEAVEVYEEMVHGGC 623
Query: 365 FPSLALYTTIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALI 502
P Y +I L ++ ++ MA ++ ++E+ + D V AL+
Sbjct: 624 EPDEVTYHLLIGGLLRDEKLGMACKIWDQMMEKGLVLDTVVGEALV 669
Score = 73.2 bits (178), Expect = 1e-10
Identities = 56/233 (24%), Positives = 94/233 (40%)
Frame = +2
Query: 29 KMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTIINAFCKAG 208
KM +G + Y ++ G K + A +E+K + Y+ I K
Sbjct: 163 KMRETGFVMHATIYRLLISGFVKAELIGLAINTFDEMLESKCVVFSRDYSRFIGVLIKYC 222
Query: 209 RTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLFPSLALYT 388
+ A K M RKG T++ I + + LL + K P + Y
Sbjct: 223 QFDLAKKYYERMVRKGYPLTTFTYSRFISGLSDANDLEYIEKLLSDIYKMGYAPDIWAYN 282
Query: 389 TIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEALHLFEEMQTK 568
++ LC+ ++D+A +L D+ +RI P+ V Y +I+G C + AL ++ EM K
Sbjct: 283 KYMNSLCRLNKLDLALTLLEDMT-RRIKPNPVTYTIIINGLCRKERFQSALEVWNEMIRK 341
Query: 569 GVYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETLIKAINS 727
G PD + LA GV +++ +G L + + LI S
Sbjct: 342 GFEPDLIACGTLVFGLCKHSKVDLAYGVAMRVITRGIALTTPVYNALINGFCS 394
>gb|EPS65318.1| hypothetical protein M569_09460 [Genlisea aurea]
Length = 519
Score = 254 bits (649), Expect = 2e-65
Identities = 126/245 (51%), Positives = 169/245 (68%), Gaps = 3/245 (1%)
Frame = +2
Query: 8 EGEKLLAKMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTII 187
E KL+AKME+ GM+PD++SYN +LKGLC++ RV++AY LL+ +M+AK +A+VVSYNT+I
Sbjct: 275 EARKLMAKMEKGGMKPDAFSYNALLKGLCRSRRVDRAYKLLITEMDAKGVANVVSYNTVI 334
Query: 188 NAFCKAGRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLF 367
++FCKAG +AY+L G M KGIAPD VTF +LI FLK G+S A+ LLD+M +L
Sbjct: 335 DSFCKAGDNERAYRLFGYMATKGIAPDAVTFAVLITGFLKAGDSAAAESLLDEMGGMNLS 394
Query: 368 PSLALYTTIIDHLCKNGRIDMAHSLFHDIVEQRIG---PDVVAYNALISGYCNAFQVNEA 538
P L L+T I+D LCK+GR+ A F + +R G PD VAYNAL++GYC A +V EA
Sbjct: 395 PGLELHTAIVDSLCKSGRMGAAREAFDGMARRRRGGIRPDAVAYNALVNGYCRAGRVGEA 454
Query: 539 LHLFEEMQTKGVYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETLIKA 718
+ EEM+++GV PD T+ A GVWD+MMEKGFTLD LSE L A
Sbjct: 455 ERVVEEMESRGVRPDGATYRTIVWGRIREGEVKAAFGVWDRMMEKGFTLDRDLSEILTNA 514
Query: 719 INSKE 733
+ ++E
Sbjct: 515 MKNRE 519
Score = 94.0 bits (232), Expect = 5e-17
Identities = 55/191 (28%), Positives = 93/191 (48%), Gaps = 2/191 (1%)
Frame = +2
Query: 8 EGEKLLAKMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTII 187
E ++L M G +PD +Y ++ GLC+ R ++A L +E + D + ++
Sbjct: 135 EALRVLRLMAEKGRDPDVVTYTTIISGLCRAKRYDEAVRLWRTMIETGIVPDSKACRALV 194
Query: 188 NAFCKAGRTRKAYKL-LGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSL 364
C+ G+ AY+L LG+M K + D + +L+D F + G A + D M +
Sbjct: 195 LGLCQVGKVDLAYELTLGDMRGK-VDFDASVYNVLVDGFCRSGRIDKALAIKDFMKRNGR 253
Query: 365 FPSLALYTTIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEALH 544
P L + ++ H C + +D A L + + + PD +YNAL+ G C + +V+ A
Sbjct: 254 QPDLITHNVLLRHCCDSRMVDEARKLMAKMEKGGMKPDAFSYNALLKGLCRSRRVDRAYK 313
Query: 545 -LFEEMQTKGV 574
L EM KGV
Sbjct: 314 LLITEMDAKGV 324
Score = 89.4 bits (220), Expect = 1e-15
Identities = 59/239 (24%), Positives = 107/239 (44%), Gaps = 1/239 (0%)
Frame = +2
Query: 8 EGEKLLAKMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTII 187
E E M R G+ S++Y+ + GLC E + L + + D+ ++N I
Sbjct: 64 ESEYYYNHMMRRGLSLHSFTYSRFISGLCGVRNFELIFALFDDMDVLGIVPDLWAFNIYI 123
Query: 188 NAFC-KAGRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSL 364
N C + +A ++L M KG PDVVT+T +I + A L M +T +
Sbjct: 124 NLLCSEEDFVDEALRVLRLMAEKGRDPDVVTYTTIISGLCRAKRYDEAVRLWRTMIETGI 183
Query: 365 FPSLALYTTIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEALH 544
P ++ LC+ G++D+A+ L + ++ D YN L+ G+C + ++++AL
Sbjct: 184 VPDSKACRALVLGLCQVGKVDLAYELTLGDMRGKVDFDASVYNVLVDGFCRSGRIDKALA 243
Query: 545 LFEEMQTKGVYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETLIKAI 721
+ + M+ G PD +T A + +M + G D++ L+K +
Sbjct: 244 IKDFMKRNGRQPDLITHNVLLRHCCDSRMVDEARKLMAKMEKGGMKPDAFSYNALLKGL 302
Score = 87.0 bits (214), Expect = 7e-15
Identities = 60/226 (26%), Positives = 96/226 (42%), Gaps = 35/226 (15%)
Frame = +2
Query: 8 EGEKLLAKMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTII 187
E +L M +G+ PDS + ++ GLC+ +V+ AY L + M K D YN ++
Sbjct: 170 EAVRLWRTMIETGIVPDSKACRALVLGLCQVGKVDLAYELTLGDMRGKVDFDASVYNVLV 229
Query: 188 NAFCKAGRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLF 367
+ FC++GR KA + M R G PD++T +L+ A+ L+ +M K +
Sbjct: 230 DGFCRSGRIDKALAIKDFMKRNGRQPDLITHNVLLRHCCDSRMVDEARKLMAKMEKGGMK 289
Query: 368 P-----------------------------------SLALYTTIIDHLCKNGRIDMAHSL 442
P ++ Y T+ID CK G + A+ L
Sbjct: 290 PDAFSYNALLKGLCRSRRVDRAYKLLITEMDAKGVANVVSYNTVIDSFCKAGDNERAYRL 349
Query: 443 FHDIVEQRIGPDVVAYNALISGYCNAFQVNEALHLFEEMQTKGVYP 580
F + + I PD V + LI+G+ A A L +EM + P
Sbjct: 350 FGYMATKGIAPDAVTFAVLITGFLKAGDSAAAESLLDEMGGMNLSP 395
Score = 56.6 bits (135), Expect = 1e-05
Identities = 38/138 (27%), Positives = 61/138 (44%), Gaps = 1/138 (0%)
Frame = +2
Query: 173 YNTIINAFCKAGRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMT 352
YN + K R ++ M R+G++ T++ I N + L D M
Sbjct: 49 YNRFLGVLIKFRRFDESEYYYNHMMRRGLSLHSFTYSRFISGLCGVRNFELIFALFDDMD 108
Query: 353 KTSLFPSLALYTTIIDHLC-KNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQV 529
+ P L + I+ LC + +D A + + E+ PDVV Y +ISG C A +
Sbjct: 109 VLGIVPDLWAFNIYINLLCSEEDFVDEALRVLRLMAEKGRDPDVVTYTTIISGLCRAKRY 168
Query: 530 NEALHLFEEMQTKGVYPD 583
+EA+ L+ M G+ PD
Sbjct: 169 DEAVRLWRTMIETGIVPD 186
>ref|XP_006304861.1| hypothetical protein CARUB_v10012598mg [Capsella rubella]
gi|482573572|gb|EOA37759.1| hypothetical protein
CARUB_v10012598mg [Capsella rubella]
Length = 517
Score = 249 bits (636), Expect = 8e-64
Identities = 126/245 (51%), Positives = 167/245 (68%)
Frame = +2
Query: 2 LGEGEKLLAKMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNT 181
L + E ++ +M RSG+E D+YSYN++LK C+ + +K Y +V +ME + DVVSY+T
Sbjct: 271 LKKAEGVMTEMVRSGVELDAYSYNQLLKRHCRVSHPDKCYSFMVKEMEPRGFCDVVSYST 330
Query: 182 IINAFCKAGRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTS 361
+I +C+A TRKAYKL EM +KGI +VVT+T LI AFL+EG S VAK LLDQMT+
Sbjct: 331 LIETYCRASNTRKAYKLFEEMRQKGIVTNVVTYTSLIKAFLREGKSSVAKKLLDQMTELG 390
Query: 362 LFPSLALYTTIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEAL 541
L P YTTI++HLCK+G ID A+ +F D++E RI PD ++YN+LI G C A +V EA+
Sbjct: 391 LSPDRIFYTTILNHLCKSGNIDKAYGVFSDMIEHRITPDAISYNSLICGLCRACRVTEAI 450
Query: 542 HLFEEMQTKGVYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETLIKAI 721
LFE+MQ+K PDE+TF S A VWDQMM+KGFTLD +S+TLIKA
Sbjct: 451 KLFEDMQSKECCPDELTFKFIIGGLIRENKVSAAYKVWDQMMDKGFTLDRDVSDTLIKAS 510
Query: 722 NSKEA 736
S A
Sbjct: 511 CSMSA 515
Score = 114 bits (285), Expect = 4e-23
Identities = 67/229 (29%), Positives = 116/229 (50%), Gaps = 1/229 (0%)
Frame = +2
Query: 29 KMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIA-DVVSYNTIINAFCKA 205
+M RSG+ PD+ + ++ GLC +V+ AY ++ ++++ + V YN +I+ FCKA
Sbjct: 174 EMIRSGVRPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKA 233
Query: 206 GRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLFPSLALY 385
GR KA L M + PD+VT+ +L++ + + A+ ++ +M ++ + Y
Sbjct: 234 GRIEKAEALKSFMNKIECEPDLVTYNVLLNYYYENNLLKKAEGVMTEMVRSGVELDAYSY 293
Query: 386 TTIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEALHLFEEMQT 565
++ C+ D +S +E R DVV+Y+ LI YC A +A LFEEM+
Sbjct: 294 NQLLKRHCRVSHPDKCYSFMVKEMEPRGFCDVVSYSTLIETYCRASNTRKAYKLFEEMRQ 353
Query: 566 KGVYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETLI 712
KG+ + VT+ S+A + DQM E G + D T++
Sbjct: 354 KGIVTNVVTYTSLIKAFLREGKSSVAKKLLDQMTELGLSPDRIFYTTIL 402
Score = 97.1 bits (240), Expect = 6e-18
Identities = 62/235 (26%), Positives = 110/235 (46%), Gaps = 1/235 (0%)
Frame = +2
Query: 14 EKLLAKMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTIINA 193
E + M+ G ++Y+ + GLCK + + LL + I D+ ++N ++
Sbjct: 64 EAIYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLRDMETLGFIPDIWAFNIYLDL 123
Query: 194 FCKAGRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLFPS 373
C+ + A + M ++G PDVV++TILI+ + G A ++ ++M ++ + P
Sbjct: 124 LCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNEMIRSGVRPD 183
Query: 374 LALYTTIIDHLCKNGRIDMAHSLF-HDIVEQRIGPDVVAYNALISGYCNAFQVNEALHLF 550
++ LC ++D+A+ + +I R+ V YNALISG+C A ++ +A L
Sbjct: 184 NKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALK 243
Query: 551 EEMQTKGVYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETLIK 715
M PD VT+ A GV +M+ G LD+Y L+K
Sbjct: 244 SFMNKIECEPDLVTYNVLLNYYYENNLLKKAEGVMTEMVRSGVELDAYSYNQLLK 298
Score = 62.0 bits (149), Expect = 2e-07
Identities = 42/173 (24%), Positives = 71/173 (41%)
Frame = +2
Query: 65 SYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTIINAFCKAGRTRKAYKLLGEM 244
+Y + L K+ ++ A + + YN I K R A + +M
Sbjct: 11 AYRSRIAKLVKSGIIDNAVQVFDEMRHSSYRVFSSDYNRFIGVLVKESRFELAEAIYWDM 70
Query: 245 GRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLFPSLALYTTIIDHLCKNGRI 424
G + T++ I K + LL M P + + +D LC+ ++
Sbjct: 71 KPMGFSLIPFTYSRFISGLCKVKKFDLIDALLRDMETLGFIPDIWAFNIYLDLLCRENKV 130
Query: 425 DMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEALHLFEEMQTKGVYPD 583
A F +V++ PDVV+Y LI+G A +V +A+ ++ EM GV PD
Sbjct: 131 GFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNEMIRSGVRPD 183
>ref|NP_172763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200670|sp|Q9SAD9.1|PPR40_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g13040, mitochondrial; Flags: Precursor
gi|4850387|gb|AAD31057.1|AC007357_6 F3F19.6 [Arabidopsis
thaliana] gi|332190841|gb|AEE28962.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 517
Score = 248 bits (632), Expect = 2e-63
Identities = 124/245 (50%), Positives = 168/245 (68%)
Frame = +2
Query: 2 LGEGEKLLAKMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNT 181
L E ++A+M RSG++ D+YSYN++LK C+ + +K Y +V +ME + DVVSY+T
Sbjct: 271 LKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYST 330
Query: 182 IINAFCKAGRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTS 361
+I FC+A TRKAY+L EM +KG+ +VVT+T LI AFL+EGNS VAK LLDQMT+
Sbjct: 331 LIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELG 390
Query: 362 LFPSLALYTTIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEAL 541
L P YTTI+DHLCK+G +D A+ +F+D++E I PD ++YN+LISG C + +V EA+
Sbjct: 391 LSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAI 450
Query: 542 HLFEEMQTKGVYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETLIKAI 721
LFE+M+ K PDE+TF S A VWDQMM+KGFTLD +S+TLIKA
Sbjct: 451 KLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKAS 510
Query: 722 NSKEA 736
S A
Sbjct: 511 CSMSA 515
Score = 113 bits (282), Expect = 9e-23
Identities = 66/228 (28%), Positives = 115/228 (50%), Gaps = 1/228 (0%)
Frame = +2
Query: 32 MERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIA-DVVSYNTIINAFCKAG 208
M RSG+ PD+ + ++ GLC +V+ AY ++ ++++ + V YN +I+ FCKAG
Sbjct: 175 MIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAG 234
Query: 209 RTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLFPSLALYT 388
R KA L M + G PD+VT+ +L++ + A+ ++ +M ++ + Y
Sbjct: 235 RIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYN 294
Query: 389 TIIDHLCKNGRIDMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEALHLFEEMQTK 568
++ C+ D ++ +E R DVV+Y+ LI +C A +A LFEEM+ K
Sbjct: 295 QLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQK 354
Query: 569 GVYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETLI 712
G+ + VT+ S+A + DQM E G + D T++
Sbjct: 355 GMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTIL 402
Score = 100 bits (249), Expect = 6e-19
Identities = 63/235 (26%), Positives = 110/235 (46%), Gaps = 1/235 (0%)
Frame = +2
Query: 14 EKLLAKMERSGMEPDSYSYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTIINA 193
E + M+ G ++Y+ + GLCK + + LL + I D+ ++N ++
Sbjct: 64 EAIYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDL 123
Query: 194 FCKAGRTRKAYKLLGEMGRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLFPS 373
C+ + A + M ++G PDVV++TILI+ + G A ++ + M ++ + P
Sbjct: 124 LCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPD 183
Query: 374 LALYTTIIDHLCKNGRIDMAHSLF-HDIVEQRIGPDVVAYNALISGYCNAFQVNEALHLF 550
++ LC ++D+A+ + +I R+ V YNALISG+C A ++ +A L
Sbjct: 184 NKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALK 243
Query: 551 EEMQTKGVYPDEVTFXXXXXXXXXXXXXSLACGVWDQMMEKGFTLDSYLSETLIK 715
M G PD VT+ A GV +M+ G LD+Y L+K
Sbjct: 244 SYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLK 298
Score = 61.6 bits (148), Expect = 3e-07
Identities = 40/173 (23%), Positives = 70/173 (40%)
Frame = +2
Query: 65 SYNEVLKGLCKTNRVEKAYMLLVNKMEAKEIADVVSYNTIINAFCKAGRTRKAYKLLGEM 244
+Y + L K+ ++ A + + YN I + R A + +M
Sbjct: 11 AYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDM 70
Query: 245 GRKGIAPDVVTFTILIDAFLKEGNSIVAKDLLDQMTKTSLFPSLALYTTIIDHLCKNGRI 424
G + T++ I K + LL M P + + +D LC+ ++
Sbjct: 71 KPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKV 130
Query: 425 DMAHSLFHDIVEQRIGPDVVAYNALISGYCNAFQVNEALHLFEEMQTKGVYPD 583
A F +V++ PDVV+Y LI+G A +V +A+ ++ M GV PD
Sbjct: 131 GFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPD 183