BLASTX nr result
ID: Rehmannia23_contig00022406
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00022406
(641 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004305215.1| PREDICTED: pentatricopeptide repeat-containi... 54 3e-09
ref|XP_002531339.1| pentatricopeptide repeat-containing protein,... 54 6e-09
ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containi... 52 7e-09
ref|XP_006833322.1| hypothetical protein AMTR_s00109p00063750 [A... 54 9e-09
ref|XP_003591696.1| Pentatricopeptide repeat-containing protein ... 63 8e-08
gb|ABQ50546.1| hypothetical protein [Brassica rapa] 51 1e-07
ref|XP_006599383.1| PREDICTED: pentatricopeptide repeat-containi... 62 2e-07
ref|XP_006599382.1| PREDICTED: pentatricopeptide repeat-containi... 62 2e-07
emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protei... 54 2e-07
gb|EMJ07558.1| hypothetical protein PRUPE_ppa017758mg, partial [... 51 2e-07
ref|XP_006480134.1| PREDICTED: pentatricopeptide repeat-containi... 49 3e-07
ref|XP_004517102.1| PREDICTED: pentatricopeptide repeat-containi... 61 3e-07
ref|NP_200798.1| pentatricopeptide repeat-containing protein [Ar... 52 3e-07
ref|XP_006429052.1| hypothetical protein CICLE_v10013605mg [Citr... 52 4e-07
ref|XP_006391749.1| hypothetical protein EUTSA_v10023942mg [Eutr... 52 4e-07
ref|XP_002526170.1| pentatricopeptide repeat-containing protein,... 44 4e-07
ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selag... 49 4e-07
ref|XP_003594869.1| Pentatricopeptide repeat-containing protein ... 60 4e-07
ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Sela... 49 5e-07
ref|XP_004246460.1| PREDICTED: pentatricopeptide repeat-containi... 49 6e-07
>ref|XP_004305215.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 761
Score = 53.9 bits (128), Expect(2) = 3e-09
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 4/141 (2%)
Frame = -1
Query: 641 DIFHTMVSQKISPDTWTFGILIERCLGI*N*SMKQ*MKPCVPFVT*K*SLTQASIVNELF 462
DI MVS+ SP+T T+ LI + + + +T K + VN L
Sbjct: 358 DILDQMVSRDCSPNTVTYNTLIST---LCKENRVEEATKLARVLTSKGIIPDVCTVNSLI 414
Query: 461 CG----GRYTIDLEIFNEMHVVGIRPN*FYVYCTLLKGLCDNRQMERDLSFLREIEKKNI 294
G + + +E+F EM + G +P+ F Y L+ C ++E LS L+++E
Sbjct: 415 QGLCLNSNHKVAMELFEEMKMKGCQPDGF-TYSLLIDSYCSRGKLEEALSLLKDMESSGC 473
Query: 293 ELHLFYYNILMDGFYKIRKLK 231
+ YN L+DGF K ++++
Sbjct: 474 ARNAVIYNTLIDGFCKNKRIE 494
Score = 33.5 bits (75), Expect(2) = 3e-09
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = -3
Query: 249 QNQKVEMALAIFRDIPSKQLKSNLVSYNTIISGCIQNRLI 130
+N+++E A IF + + + N V+YNT+I G QNR +
Sbjct: 489 KNKRIEDAEEIFDQMELQGISRNSVTYNTLIDGLCQNRRV 528
>ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223529061|gb|EEF31046.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 630
Score = 54.3 bits (129), Expect(2) = 6e-09
Identities = 28/84 (33%), Positives = 50/84 (59%)
Frame = -1
Query: 482 SIVNELFCGGRYTIDLEIFNEMHVVGIRPN*FYVYCTLLKGLCDNRQMERDLSFLREIEK 303
S ++E+ G++T+ +E++NEM G +P+ F Y L+ LC +++ L LRE+E
Sbjct: 284 SFIDEMSNEGKHTMAIELYNEMKNKGCQPDEF-TYNMLIDSLCYRGKLQEALGLLREMEI 342
Query: 302 KNIELHLFYYNILMDGFYKIRKLK 231
++ YN L+DGF K +K++
Sbjct: 343 SGCARNVITYNTLIDGFCKNKKIE 366
Score = 32.3 bits (72), Expect(2) = 6e-09
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = -3
Query: 249 QNQKVEMALAIFRDIPSKQLKSNLVSYNTIISGCIQNRLI 130
+N+K+E A IF + + L N V+YNT+I G ++R +
Sbjct: 361 KNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRV 400
>ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 52.0 bits (123), Expect(2) = 7e-09
Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 4/141 (2%)
Frame = -1
Query: 641 DIFHTMVSQKISPDTWTFGILIERCLGI*N*SMKQ*MKPCVPFVT*K*SLTQASIVNELF 462
+I + M+ + SP+T T+ LI + + +T K L N L
Sbjct: 372 EILNQMILRDFSPNTVTYNTLISTLC---KENQVEEATELARVLTSKGILPDVCTFNSLI 428
Query: 461 CG----GRYTIDLEIFNEMHVVGIRPN*FYVYCTLLKGLCDNRQMERDLSFLREIEKKNI 294
G + + +E+F EM G P+ F Y L+ LC ++E LS L+E+E
Sbjct: 429 QGLCLTNNHRLAMELFEEMKTKGCHPDEF-TYNMLIDSLCSRGRLEEALSLLKEMESSGC 487
Query: 293 ELHLFYYNILMDGFYKIRKLK 231
++ YN L+DGF K ++++
Sbjct: 488 SRNVVTYNTLIDGFCKNKRIE 508
Score = 34.3 bits (77), Expect(2) = 7e-09
Identities = 14/40 (35%), Positives = 27/40 (67%)
Frame = -3
Query: 249 QNQKVEMALAIFRDIPSKQLKSNLVSYNTIISGCIQNRLI 130
+N+++E A IF ++ + + N+V+YNT+I G +NR +
Sbjct: 503 KNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRV 542
>ref|XP_006833322.1| hypothetical protein AMTR_s00109p00063750 [Amborella trichopoda]
gi|548837998|gb|ERM98600.1| hypothetical protein
AMTR_s00109p00063750 [Amborella trichopoda]
Length = 409
Score = 53.5 bits (127), Expect(2) = 9e-09
Identities = 36/138 (26%), Positives = 66/138 (47%), Gaps = 6/138 (4%)
Frame = -1
Query: 641 DIFHTMVSQKISPDTWTFGILIERCL------GI*N*SMKQ*MKPCVPFVT*K*SLTQAS 480
D+ M + + PD +TF LI G + + C+P + +T
Sbjct: 31 DLLVEMDHKGLKPDVFTFSALINGLCKENDIEGALELCKEMWKRGCIPDI-----ITYNK 85
Query: 479 IVNELFCGGRYTIDLEIFNEMHVVGIRPN*FYVYCTLLKGLCDNRQMERDLSFLREIEKK 300
++ L GGR + + EM+ G+ P+ F +Y TL+ GLC +++ L+ ++E+ K+
Sbjct: 86 VMEGLCKGGRTEEAMSLLVEMYHNGLDPD-FVLYSTLINGLCKAKKLAEALALVKEMVKR 144
Query: 299 NIELHLFYYNILMDGFYK 246
+ ++ YN +DGF K
Sbjct: 145 GCQPNILTYNTFIDGFCK 162
Score = 32.3 bits (72), Expect(2) = 9e-09
Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = -3
Query: 240 KVEMALAIFRDIPSKQLKSNLVSYNTIISG-CIQNRLIG 127
K E A+ + +D+ LK+++V+YNT+I+G C N + G
Sbjct: 165 KTEEAMVLLKDMHHNGLKADVVTYNTLINGLCKANNIKG 203
>ref|XP_003591696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480744|gb|AES61947.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 543
Score = 62.8 bits (151), Expect = 8e-08
Identities = 42/166 (25%), Positives = 83/166 (50%), Gaps = 1/166 (0%)
Frame = -1
Query: 497 SLTQASIVNELFCGGRYTIDLEIFNEMHVVGIRPN*FYVYCTLLKGLCDNRQMERDLSFL 318
++T S+++ L GR + E+ +EM G +P Y +L+ LC N +++ ++ +
Sbjct: 371 TVTYNSLIDGLCKSGRISYAWELVDEMRDSG-QPADIITYNSLIDALCKNHHVDKAIALV 429
Query: 317 REIEKKNIELHLFYYNILMDGFYKIRKLKWLLPSLGTFLQNN*NL-IWLATTR*SVDAFK 141
++I+ + I+L ++ YNIL+DG K +LK L NL +W T + +
Sbjct: 430 KKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLE 489
Query: 140 IGSSVANHFMLKTKEIDILPNVITSDSIVQQYIKNDKYNEGSKYFR 3
+ A + K ++ +P+ +T ++I++ +NDK K R
Sbjct: 490 GLLNEAETLLSKMEDNGCVPDAVTCETIIRALFENDKNERAEKLLR 535
>gb|ABQ50546.1| hypothetical protein [Brassica rapa]
Length = 650
Score = 51.2 bits (121), Expect(2) = 1e-07
Identities = 37/133 (27%), Positives = 63/133 (47%), Gaps = 2/133 (1%)
Frame = -1
Query: 626 MVSQKISPDTWTFGILIERCLGI*--N*SMKQ*MKPCVPFVT*K*SLTQASIVNELFCGG 453
MVS+ PD WT+ ILI + M+ K + + ++T ++++
Sbjct: 396 MVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIAD-TVTYSTLIQGFCQSR 454
Query: 452 RYTIDLEIFNEMHVVGIRPN*FYVYCTLLKGLCDNRQMERDLSFLREIEKKNIELHLFYY 273
+ + ++F EM G+ P Y LL GLCDN ++E L L ++ K +EL + Y
Sbjct: 455 KLIVAKKVFQEMVSQGVHPG-IMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIY 513
Query: 272 NILMDGFYKIRKL 234
NI++ G K+
Sbjct: 514 NIIIHGMCNANKV 526
Score = 31.2 bits (69), Expect(2) = 1e-07
Identities = 18/51 (35%), Positives = 34/51 (66%), Gaps = 3/51 (5%)
Frame = -3
Query: 240 KVEMALAIFRDIPSKQLKSNLVSYNTIISG-CIQNRLIGG*SLY--VKDEG 97
KV+ A ++F +PSK +K ++ SYN ++SG C ++ L +L+ +K++G
Sbjct: 525 KVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDG 575
>ref|XP_006599383.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like isoform X2 [Glycine max]
Length = 511
Score = 61.6 bits (148), Expect = 2e-07
Identities = 54/216 (25%), Positives = 99/216 (45%), Gaps = 7/216 (3%)
Frame = -1
Query: 638 IFHTMVSQKISPDTWTFGILI------ERCLGI*N*SMKQ*MKPCVPFVT*K*SLTQASI 477
+FH+MV ++P ++ I+I +R N + K VP ++T +S+
Sbjct: 277 MFHSMVQTGVNPSVHSYSIMINGLCKSKRVDEAMNLLREMPHKNMVPN-----TVTYSSL 331
Query: 476 VNELFCGGRYTIDLEIFNEMHVVGIRPN*FYVYCTLLKGLCDNRQMERDLSFLREIEKKN 297
++ L GR T L++ EMH G PN Y +LL GLC N+ ++ ++ +++K+
Sbjct: 332 IDGLCKSGRITSALDLMKEMHHRGQPPN-VVTYTSLLDGLCKNQNHDKAIALFMKMKKRR 390
Query: 296 IELHLFYYNILMDGFYKIRKLKWLLPSLGTFLQNN*NL-IWLATTR*SVDAFKIGSSVAN 120
I+ ++ Y L+DG K +LK L L +W T S + A
Sbjct: 391 IQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVRGYCLNVWTYTVMISGLCKEGMFDEAL 450
Query: 119 HFMLKTKEIDILPNVITSDSIVQQYIKNDKYNEGSK 12
K ++ +PN +T + I++ + D+ ++ K
Sbjct: 451 AIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEK 486
>ref|XP_006599382.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like isoform X1 [Glycine max]
Length = 567
Score = 61.6 bits (148), Expect = 2e-07
Identities = 54/216 (25%), Positives = 99/216 (45%), Gaps = 7/216 (3%)
Frame = -1
Query: 638 IFHTMVSQKISPDTWTFGILI------ERCLGI*N*SMKQ*MKPCVPFVT*K*SLTQASI 477
+FH+MV ++P ++ I+I +R N + K VP ++T +S+
Sbjct: 333 MFHSMVQTGVNPSVHSYSIMINGLCKSKRVDEAMNLLREMPHKNMVPN-----TVTYSSL 387
Query: 476 VNELFCGGRYTIDLEIFNEMHVVGIRPN*FYVYCTLLKGLCDNRQMERDLSFLREIEKKN 297
++ L GR T L++ EMH G PN Y +LL GLC N+ ++ ++ +++K+
Sbjct: 388 IDGLCKSGRITSALDLMKEMHHRGQPPN-VVTYTSLLDGLCKNQNHDKAIALFMKMKKRR 446
Query: 296 IELHLFYYNILMDGFYKIRKLKWLLPSLGTFLQNN*NL-IWLATTR*SVDAFKIGSSVAN 120
I+ ++ Y L+DG K +LK L L +W T S + A
Sbjct: 447 IQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVRGYCLNVWTYTVMISGLCKEGMFDEAL 506
Query: 119 HFMLKTKEIDILPNVITSDSIVQQYIKNDKYNEGSK 12
K ++ +PN +T + I++ + D+ ++ K
Sbjct: 507 AIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEK 542
>emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 53.5 bits (127), Expect(2) = 2e-07
Identities = 28/89 (31%), Positives = 50/89 (56%)
Frame = -1
Query: 497 SLTQASIVNELFCGGRYTIDLEIFNEMHVVGIRPN*FYVYCTLLKGLCDNRQMERDLSFL 318
++T +++ LF G + EIF EM G+ PN Y TLL GLC N ++E+ +
Sbjct: 431 TVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPN-IMTYNTLLDGLCKNGKLEKAMVVF 489
Query: 317 REIEKKNIELHLFYYNILMDGFYKIRKLK 231
+++ +E ++ YNI+++G K K++
Sbjct: 490 EYLQRSKMEPTIYTYNIMIEGMCKAGKVE 518
Score = 27.7 bits (60), Expect(2) = 2e-07
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = -3
Query: 240 KVEMALAIFRDIPSKQLKSNLVSYNTIISG 151
KVE +F ++ K +K ++V+YNT+ISG
Sbjct: 516 KVEDGWDLFCNLSLKGVKPDVVAYNTMISG 545
>gb|EMJ07558.1| hypothetical protein PRUPE_ppa017758mg, partial [Prunus persica]
Length = 369
Score = 51.2 bits (121), Expect(2) = 2e-07
Identities = 27/89 (30%), Positives = 49/89 (55%)
Frame = -1
Query: 497 SLTQASIVNELFCGGRYTIDLEIFNEMHVVGIRPN*FYVYCTLLKGLCDNRQMERDLSFL 318
++T ++V+ G+ ++F++M G PN Y LL GLC NRQ+ +
Sbjct: 160 TVTYNTVVDGCCKMGKIRDAQQLFSKMQACGQLPN-VQTYAILLDGLCKNRQLSTAIQLF 218
Query: 317 REIEKKNIELHLFYYNILMDGFYKIRKLK 231
RE+E K +++++ Y IL++G RK++
Sbjct: 219 REMEGKKLDVNIVIYTILIEGLCIARKIE 247
Score = 30.0 bits (66), Expect(2) = 2e-07
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = -3
Query: 243 QKVEMALAIFRDIPSKQLKSNLVSYNTIISG-CI 145
+K+E A +FR + SK L+ N +YN +I G CI
Sbjct: 244 RKIESARVLFRGLSSKGLQPNARTYNIMIKGLCI 277
>ref|XP_006480134.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Citrus sinensis]
Length = 766
Score = 48.5 bits (114), Expect(2) = 3e-07
Identities = 23/67 (34%), Positives = 38/67 (56%)
Frame = -1
Query: 434 EIFNEMHVVGIRPN*FYVYCTLLKGLCDNRQMERDLSFLREIEKKNIELHLFYYNILMDG 255
E++NEM + PN Y Y L++G C ++ L F E+EK N ++ YN L+DG
Sbjct: 205 EVYNEMGKSRVSPN-VYTYNVLIRGFCGVGDLQMGLRFFSEMEKNNCLANVVTYNTLIDG 263
Query: 254 FYKIRKL 234
+ K+ ++
Sbjct: 264 YCKLGRI 270
Score = 32.3 bits (72), Expect(2) = 3e-07
Identities = 15/37 (40%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = -3
Query: 240 KVEMALAIFRDIPSKQLKSNLVSYNTIISG-CIQNRL 133
+++ A + RD+ K ++ NL+SYN II+G C + RL
Sbjct: 269 RIDDAFKLLRDMGLKGIEPNLISYNVIINGLCREGRL 305
>ref|XP_004517102.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cicer arietinum]
Length = 558
Score = 60.8 bits (146), Expect = 3e-07
Identities = 52/227 (22%), Positives = 100/227 (44%), Gaps = 15/227 (6%)
Frame = -1
Query: 638 IFHTMVSQKISPDTWTFGILIE---------RCLGI*N*SMKQ*MKPCVPFVT*K*SLTQ 486
+F MV + ++PD +TF IL++ + + +K +KP V +T
Sbjct: 268 LFREMVLKNVNPDVYTFNILVDALSKEGKVKEAMNVLAMMIKDGVKPDV--------VTY 319
Query: 485 ASIVNELFCGGRYTIDLEIFNEMHVVGIRPN*FYVYCTLLKGLCDNRQMERDLSFLREIE 306
++++ + + IFN M G+ P+ + Y ++ GLC N+ ++ +F +E+
Sbjct: 320 GALMDGYCLVNQVNKAINIFNTMVHKGVVPS-VWCYNIIINGLCKNKMVDEATNFFKEMH 378
Query: 305 KKNIELHLFYYNILMDGFYKIRKLKWLLPSLGTFLQNN*NLIWLATTR*SVDAFKIGSSV 126
K I + Y+ L+DG +K RK+ S L + +LI L + ++
Sbjct: 379 NKMIVPDVVTYSTLIDGLFKSRKI-----SYAWELVDEMHLIGLQVDVITYNSLLHALCK 433
Query: 125 ANH------FMLKTKEIDILPNVITSDSIVQQYIKNDKYNEGSKYFR 3
NH ++K K+ DI PN+ T + ++ K + F+
Sbjct: 434 KNHLDQAIALVMKMKDQDIQPNMFTYNILIDGLCKGGRLKNAQVIFQ 480
Score = 58.9 bits (141), Expect = 1e-06
Identities = 38/143 (26%), Positives = 77/143 (53%), Gaps = 6/143 (4%)
Frame = -1
Query: 641 DIFHTMVSQKISPDTWTFGILIERCL------GI*N*SMKQ*MKPCVPFVT*K*SLTQAS 480
+IF+TMV + + P W + I+I N + K VP V +T ++
Sbjct: 337 NIFNTMVHKGVVPSVWCYNIIINGLCKNKMVDEATNFFKEMHNKMIVPDV-----VTYST 391
Query: 479 IVNELFCGGRYTIDLEIFNEMHVVGIRPN*FYVYCTLLKGLCDNRQMERDLSFLREIEKK 300
+++ LF + + E+ +EMH++G++ + Y +LL LC +++ ++ + +++ +
Sbjct: 392 LIDGLFKSRKISYAWELVDEMHLIGLQVD-VITYNSLLHALCKKNHLDQAIALVMKMKDQ 450
Query: 299 NIELHLFYYNILMDGFYKIRKLK 231
+I+ ++F YNIL+DG K +LK
Sbjct: 451 DIQPNMFTYNILIDGLCKGGRLK 473
>ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName:
Full=Putative pentatricopeptide repeat-containing
protein At5g59900 gi|9757911|dbj|BAB08358.1| unnamed
protein product [Arabidopsis thaliana]
gi|332009866|gb|AED97249.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 907
Score = 51.6 bits (122), Expect(2) = 3e-07
Identities = 24/86 (27%), Positives = 52/86 (60%)
Frame = -1
Query: 491 TQASIVNELFCGGRYTIDLEIFNEMHVVGIRPN*FYVYCTLLKGLCDNRQMERDLSFLRE 312
T +++++ L + + +E+FN+M VGIRP+ Y+Y +++ LC+ + + R +
Sbjct: 194 TLSALLHGLVKFRHFGLAMELFNDMVSVGIRPD-VYIYTGVIRSLCELKDLSRAKEMIAH 252
Query: 311 IEKKNIELHLFYYNILMDGFYKIRKL 234
+E ++++ YN+L+DG K +K+
Sbjct: 253 MEATGCDVNIVPYNVLIDGLCKKQKV 278
Score = 28.9 bits (63), Expect(2) = 3e-07
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = -3
Query: 249 QNQKVEMALAIFRDIPSKQLKSNLVSYNTIISG 151
+ QKV A+ I +D+ K LK ++V+Y T++ G
Sbjct: 274 KKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYG 306
>ref|XP_006429052.1| hypothetical protein CICLE_v10013605mg [Citrus clementina]
gi|568854342|ref|XP_006480788.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Citrus sinensis]
gi|557531109|gb|ESR42292.1| hypothetical protein
CICLE_v10013605mg [Citrus clementina]
Length = 768
Score = 52.0 bits (123), Expect(2) = 4e-07
Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 4/141 (2%)
Frame = -1
Query: 641 DIFHTMVSQKISPDTWTFGILIERCLGI*N*SMKQ*MKPCVPFVT*K*SLTQASIVNELF 462
+I + M+ + SP+T T+ LI + + +T K L N L
Sbjct: 362 EILNQMILRDCSPNTITYNTLISTLC---KENQVEEATELARVLTSKGILPDVCTFNSLI 418
Query: 461 CG----GRYTIDLEIFNEMHVVGIRPN*FYVYCTLLKGLCDNRQMERDLSFLREIEKKNI 294
G + + +E+F EM G +P+ F Y L+ LC +E L L+E+E
Sbjct: 419 QGLCLTSNFDLAMELFQEMKTKGCQPDEF-TYNMLIDSLCSRGMLEEALKLLKEMESSGC 477
Query: 293 ELHLFYYNILMDGFYKIRKLK 231
++ YN L+DGF K+++++
Sbjct: 478 ARNVVTYNTLIDGFCKLKRIE 498
Score = 28.5 bits (62), Expect(2) = 4e-07
Identities = 12/38 (31%), Positives = 24/38 (63%)
Frame = -3
Query: 243 QKVEMALAIFRDIPSKQLKSNLVSYNTIISGCIQNRLI 130
+++E A IF ++ + + N V+YNT+I G ++R +
Sbjct: 495 KRIEEAEEIFDEMEIQGISRNSVTYNTLIDGLCKSRRV 532
>ref|XP_006391749.1| hypothetical protein EUTSA_v10023942mg [Eutrema salsugineum]
gi|557088255|gb|ESQ29035.1| hypothetical protein
EUTSA_v10023942mg [Eutrema salsugineum]
Length = 635
Score = 51.6 bits (122), Expect(2) = 4e-07
Identities = 28/89 (31%), Positives = 49/89 (55%)
Frame = -1
Query: 497 SLTQASIVNELFCGGRYTIDLEIFNEMHVVGIRPN*FYVYCTLLKGLCDNRQMERDLSFL 318
++T +++ F G EIF M G+ P Y LL GLC+N ++E+ L
Sbjct: 436 TVTYNTLIQGYFQAGDCDNAQEIFKHMVSSGV-PRDIVTYSNLLHGLCNNGKLEKALVIF 494
Query: 317 REIEKKNIELHLFYYNILMDGFYKIRKLK 231
++++K IEL++ YNI+++G K K++
Sbjct: 495 QDMQKSEIELNIVTYNIIIEGMCKAGKVE 523
Score = 28.9 bits (63), Expect(2) = 4e-07
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = -3
Query: 240 KVEMALAIFRDIPSKQLKSNLVSYNTIISG 151
KVE A +F ++ K +K ++V+YNT+ISG
Sbjct: 521 KVEDAWDLFCNLNLKGVKPDVVTYNTMISG 550
Score = 43.9 bits (102), Expect(2) = 6e-07
Identities = 33/128 (25%), Positives = 61/128 (47%), Gaps = 1/128 (0%)
Frame = -1
Query: 626 MVSQKISPDTWTFGILIERCLGI*N*-SMKQ*MKPCVPFVT*K*SLTQASIVNELFCGGR 450
M+ +KI+PD TF LI+ + ++ K + ++T +S++N R
Sbjct: 322 MIERKINPDVVTFNALIDAFVKEGKLLEAEELYKEMIRRSIDPDTITCSSLINGFCMHDR 381
Query: 449 YTIDLEIFNEMHVVGIRPN*FYVYCTLLKGLCDNRQMERDLSFLREIEKKNIELHLFYYN 270
+F M G PN Y TL+ GLC ++++E + RE+ ++ I + YN
Sbjct: 382 LDEAERMFEFMVSKGSLPN-VVTYTTLINGLCKSKRVEDGMELFREMSQRGIVGNTVTYN 440
Query: 269 ILMDGFYK 246
L+ G+++
Sbjct: 441 TLIQGYFQ 448
Score = 35.8 bits (81), Expect(2) = 6e-07
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = -3
Query: 246 NQKVEMALAIFRDIPSKQLKSNLVSYNTIISG 151
N K+E AL IF+D+ +++ N+V+YN II G
Sbjct: 484 NGKLEKALVIFQDMQKSEIELNIVTYNIIIEG 515
>ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223534547|gb|EEF36246.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 504
Score = 43.5 bits (101), Expect(2) = 4e-07
Identities = 24/85 (28%), Positives = 41/85 (48%)
Frame = -1
Query: 491 TQASIVNELFCGGRYTIDLEIFNEMHVVGIRPN*FYVYCTLLKGLCDNRQMERDLSFLRE 312
T ++ L+ GR E+FN M + G P+ Y LL GLC N +E + R
Sbjct: 291 TYTILLKALYQNGRIRTAKELFNNMQICGQSPS-LDTYTVLLDGLCKNGCIEEAIDVFRS 349
Query: 311 IEKKNIELHLFYYNILMDGFYKIRK 237
++ + + Y+IL+ G ++ R+
Sbjct: 350 LKSIKYKPSIRIYSILIGGMFQARR 374
Score = 37.0 bits (84), Expect(2) = 4e-07
Identities = 20/55 (36%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = -3
Query: 261 GRVLQNQKVEMALAIFRDIPSKQLKSNLVSYNTIISG-CIQNRLIGG*SLYVKDE 100
G + Q ++ E A+ IF +IP+ L N+V+YN +I+G C + +L+ L+V+ E
Sbjct: 367 GGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQME 421
>ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein
SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 48.5 bits (114), Expect(2) = 4e-07
Identities = 32/93 (34%), Positives = 47/93 (50%)
Frame = -1
Query: 524 CVPFVT*K*SLTQASIVNELFCGGRYTIDLEIFNEMHVVGIRPN*FYVYCTLLKGLCDNR 345
CVP V +T +++++ L GR + IF M G+ PN VY L+ GLC R
Sbjct: 170 CVPDV-----VTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPN-EVVYSALIHGLCKAR 223
Query: 344 QMERDLSFLREIEKKNIELHLFYYNILMDGFYK 246
+M+ L L +++K YNIL+DG K
Sbjct: 224 KMDCALEMLAQMKKAFCTPDTITYNILIDGLCK 256
Score = 32.0 bits (71), Expect(2) = 4e-07
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = -3
Query: 234 EMALAIFRDIPSKQLKSNLVSYNTIISGCIQNRLIGG*SLY 112
+ A +F D+ S + N+V+Y T+ISG + R + SLY
Sbjct: 296 DAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLY 336
>ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483917|gb|AES65120.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 545
Score = 60.5 bits (145), Expect = 4e-07
Identities = 54/230 (23%), Positives = 107/230 (46%), Gaps = 18/230 (7%)
Frame = -1
Query: 638 IFHTMVSQKISPDTWTFGILIERC--LGI*N*SMK----Q*MKPCVPFVT*K*SLTQASI 477
+F+ M + ++PD W++ I+I + + + +MK K P V +T S+
Sbjct: 325 LFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNV-----VTYNSL 379
Query: 476 VNELFCGGRYTIDLEIFNEMHVVGIRPN*FYVYCTLLKGLCDNRQMERDLSFLREIEKKN 297
V+ L GR + LE+ +EMH G +P+ Y ++L +C N +++ + L +I++K
Sbjct: 380 VDGLCKSGRTSCALELVDEMHDRG-QPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKG 438
Query: 296 IELHLFYYNILMDGFYKIRKL------------KWLLPSLGTFLQNN*NLIWLATTR*SV 153
I+ +F Y +L++G K+ +L K P++ T+ L +
Sbjct: 439 IQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTS-------LINGFCNK 491
Query: 152 DAFKIGSSVANHFMLKTKEIDILPNVITSDSIVQQYIKNDKYNEGSKYFR 3
F G ++ + K K+ +PN IT + ++ + D+ ++ K R
Sbjct: 492 GFFDEGLAM----LSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLR 537
>ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein
SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 48.5 bits (114), Expect(2) = 5e-07
Identities = 32/93 (34%), Positives = 47/93 (50%)
Frame = -1
Query: 524 CVPFVT*K*SLTQASIVNELFCGGRYTIDLEIFNEMHVVGIRPN*FYVYCTLLKGLCDNR 345
CVP V +T +++++ L GR + IF M G+ PN VY L+ GLC R
Sbjct: 301 CVPDV-----VTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPN-EVVYSALIHGLCKAR 354
Query: 344 QMERDLSFLREIEKKNIELHLFYYNILMDGFYK 246
+M+ L L +++K YNIL+DG K
Sbjct: 355 KMDCALEMLAQMKKAFCTPDTITYNILIDGLCK 387
Score = 31.6 bits (70), Expect(2) = 5e-07
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = -3
Query: 234 EMALAIFRDIPSKQLKSNLVSYNTIISGCIQNRLIGG*SLY 112
+ A +F D+ S N+V+Y T+ISG + R + SLY
Sbjct: 427 DAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLY 467
>ref|XP_004246460.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Solanum lycopersicum]
Length = 766
Score = 49.3 bits (116), Expect(2) = 6e-07
Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 4/141 (2%)
Frame = -1
Query: 641 DIFHTMVSQKISPDTWTFGILIERCLGI*N*SMKQ*MKPCVPFVT*K*SLTQASIVNELF 462
++ + M+ + +P+T T+ +I + + Q +T K L N L
Sbjct: 365 ELLNQMLVRDCTPNTVTYNTIISALCKV---NQVQEATEFARVLTSKGFLPDVCTFNSLI 421
Query: 461 CG----GRYTIDLEIFNEMHVVGIRPN*FYVYCTLLKGLCDNRQMERDLSFLREIEKKNI 294
G G + I +E+F EM G +P+ F Y L+ LC R++ L+ L+++E
Sbjct: 422 QGLCFTGNFNIAMEMFEEMKDKGCQPDEF-TYNILIDCLCAKRRIGEALNLLKDMESSGC 480
Query: 293 ELHLFYYNILMDGFYKIRKLK 231
+ YN L+DGF K +K++
Sbjct: 481 ARSVITYNTLIDGFCKDKKIE 501
Score = 30.4 bits (67), Expect(2) = 6e-07
Identities = 13/40 (32%), Positives = 26/40 (65%)
Frame = -3
Query: 249 QNQKVEMALAIFRDIPSKQLKSNLVSYNTIISGCIQNRLI 130
+++K+E A IF + + + NLV+YNT+I G +++ +
Sbjct: 496 KDKKIEEAEEIFDQMELQGVSRNLVTYNTLIDGLCKSKRV 535