BLASTX nr result

ID: Rehmannia23_contig00021715 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00021715
         (1300 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509829.1| conserved hypothetical protein [Ricinus comm...   174   7e-41

>ref|XP_002509829.1| conserved hypothetical protein [Ricinus communis]
            gi|223549728|gb|EEF51216.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 358

 Score =  174 bits (441), Expect = 7e-41
 Identities = 107/370 (28%), Positives = 198/370 (53%), Gaps = 17/370 (4%)
 Frame = +1

Query: 85   EEKTTRVLYNFSLTTRLGHLPISSTDVIVDLLPLNFRIEEYYHA------LSLSSNHFLV 246
            E ++  V Y ++  T LG L  + T+  +D    +  + E ++A       S + ++FL 
Sbjct: 2    ENRSVDVTYEYNSYTLLGVLHDTGTEFTLD----DDTVGEEWNAGTSSITFSFTHDNFLR 57

Query: 247  CEFIDDLEKAVVYQRFDQTIREYVDHLKNKKINPVMEFIVPCSRLTP------YNYMPKE 408
            C  ID + K ++++R+D T++E+++HLK + INP+  + +P  R  P       NY+P E
Sbjct: 58   CYIIDRISKNILHERYDLTLQEWINHLKRETINPIARYPIP-HRQGPTIPSHTANYVPNE 116

Query: 409  YRTLVKSMIEFIVELHLNNDKSLRNFSLDNMVIKHSILKFWKLRFLPATEHRRKADFRCL 588
            YR L+KSM+ F+V++H +   S   F + N+VIK+ ++KFWK++F+ A+   +  DF CL
Sbjct: 117  YRKLIKSMVTFVVDIH-DAGYSTAGFGMPNIVIKNEVVKFWKVQFITASMGSKNNDFICL 175

Query: 589  ERVIKKLFENK----CPPILTDLLTMMTHSQSIDAEKRLPKHLAVLSSPERLAFFKDCFD 756
             RV++ LF  +     P  +   L ++      + E  + +H+A++S  ER++FF DC++
Sbjct: 176  HRVVESLFSGEQHLHLPREMQHFLDLLISGTQSEDEYLISRHVAIMSHDERVSFFTDCWE 235

Query: 757  KREDFNLIDKKIYERAVASMGNNSGWAQKFFNDNVGRYGPLKECFIHGHHQNSQQNSYMY 936
            ++       +  Y+RA   +G N  W  +  + ++   GPL +C+   +H  +       
Sbjct: 236  RQHSLPKNQQGCYKRATRGLGRNQNWTGRISDTSL---GPLYDCY--DYHTRTNGGFDDR 290

Query: 937  KGDIERENLGLLRFFWNSAAHLRSHIRACIDDWDEINDECVELSIMAVFERQLLKFQQEL 1116
             G+ ER N  L++ + +   HLR   +         ND  +++ +M VF  ++ +FQ+ L
Sbjct: 291  SGNKERINRELIKCWRHLGTHLREKGKTY---GYAFNDRDIDVMVMHVFADKIAQFQKLL 347

Query: 1117 Y-NVGLLDRF 1143
            + N G+L  F
Sbjct: 348  WTNDGILTEF 357


Top