BLASTX nr result
ID: Rehmannia23_contig00021666
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00021666
(1493 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006338491.1| PREDICTED: pentatricopeptide repeat-containi... 741 0.0
gb|EXB47690.1| hypothetical protein L484_010474 [Morus notabilis] 734 0.0
ref|XP_004232248.1| PREDICTED: pentatricopeptide repeat-containi... 733 0.0
ref|XP_002276556.1| PREDICTED: pentatricopeptide repeat-containi... 723 0.0
gb|EMJ16220.1| hypothetical protein PRUPE_ppa003340mg [Prunus pe... 716 0.0
gb|EOY03346.1| Tetratricopeptide repeat (TPR)-like superfamily p... 714 0.0
ref|XP_002324029.2| hypothetical protein POPTR_0017s11210g [Popu... 710 0.0
ref|XP_004147489.1| PREDICTED: pentatricopeptide repeat-containi... 698 0.0
ref|XP_002517447.1| pentatricopeptide repeat-containing protein,... 697 0.0
ref|NP_198814.1| pentatricopeptide repeat-containing protein [Ar... 694 0.0
dbj|BAE98404.1| hypothetical protein [Arabidopsis thaliana] 694 0.0
ref|XP_004304956.1| PREDICTED: pentatricopeptide repeat-containi... 693 0.0
ref|XP_006286056.1| hypothetical protein CARUB_v10007588mg [Caps... 689 0.0
ref|XP_006431055.1| hypothetical protein CICLE_v10011224mg [Citr... 689 0.0
ref|XP_006405566.1| hypothetical protein EUTSA_v10028245mg [Eutr... 689 0.0
ref|XP_002870737.1| pentatricopeptide repeat-containing protein ... 688 0.0
ref|XP_006482520.1| PREDICTED: pentatricopeptide repeat-containi... 687 0.0
ref|XP_003538522.1| PREDICTED: pentatricopeptide repeat-containi... 684 0.0
gb|ESW35832.1| hypothetical protein PHAVU_001G268500g [Phaseolus... 682 0.0
ref|XP_003552765.1| PREDICTED: pentatricopeptide repeat-containi... 680 0.0
>ref|XP_006338491.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Solanum tuberosum]
Length = 668
Score = 741 bits (1912), Expect = 0.0
Identities = 372/432 (86%), Positives = 403/432 (93%)
Frame = +2
Query: 5 DYSKAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSYS 184
DY+KAISIFSRLK SGITPDLVAYN+MINVFGKAKLFREA+ LI EMR+ GV+PDTVSYS
Sbjct: 235 DYTKAISIFSRLKTSGITPDLVAYNTMINVFGKAKLFREAQLLIKEMRSVGVLPDTVSYS 294
Query: 185 TLLTMYVENQKFLEALSLFKEMKEIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRKI 364
TLLTMYVENQKFLEALS+F EM E+KC LDLTTCNIMIDVYGQLDMAKEAD+LFW MRK+
Sbjct: 295 TLLTMYVENQKFLEALSVFSEMNEVKCSLDLTTCNIMIDVYGQLDMAKEADRLFWSMRKM 354
Query: 365 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYGKTLEHEKA 544
GIEPNVVSYNTLLRVYG+AELFGEAIHLFRLMQRK IEQNVVTYNTMI IYGKTLEHEKA
Sbjct: 355 GIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKSIEQNVVTYNTMIKIYGKTLEHEKA 414
Query: 545 NNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTMLVA 724
NNLIQEM + GIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSG+EIDQVLYQTM+VA
Sbjct: 415 NNLIQEMQNIGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVA 474
Query: 725 YERAGLVAHAKRLLHELKRPDNIPRETAICILAGAGRIEEATWVFRQAVDAGEVKDIAVF 904
YERAGLVAHAKRLLHELKRPDNIPRETAI ILAG+GRIEEATWVFRQA DAGE+KDIAVF
Sbjct: 475 YERAGLVAHAKRLLHELKRPDNIPRETAIMILAGSGRIEEATWVFRQAFDAGELKDIAVF 534
Query: 905 EQMIDLFSKYRKYTNVVEVFEKMRGIGYFPNSNVIALVLNAYGKLHEFGKADGVYIELQD 1084
E MI+L+S+ RKYTN++EVFEKMRG GYFPNSNVIALVLNAYGKL EF KAD VY E+ +
Sbjct: 535 ECMIELYSRNRKYTNLIEVFEKMRGTGYFPNSNVIALVLNAYGKLQEFEKADMVYKEMHE 594
Query: 1085 EGYVFSDEVHFQMLSLYGARRNFEMVEILFERLEMDPNINKKDLHLVVAGIYEGANRHND 1264
EG VFSDEVHFQMLSLYGARRN+EMVE L++ L+ DPN+NKK+LHLVVAGIYE ANR ND
Sbjct: 595 EGCVFSDEVHFQMLSLYGARRNYEMVETLYKMLDSDPNVNKKELHLVVAGIYEKANRVND 654
Query: 1265 ASRIVNQMSDKG 1300
ASRIVN+M+ +G
Sbjct: 655 ASRIVNRMTYRG 666
Score = 124 bits (311), Expect = 1e-25
Identities = 96/438 (21%), Positives = 196/438 (44%), Gaps = 6/438 (1%)
Frame = +2
Query: 5 DYSKAISIFSRLKRSGI-TPDLVAYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSY 181
D+ +++++ + + TP + AYN + +AK ++ A L EMR + PD +Y
Sbjct: 129 DWQRSLALLDWINEVALYTPSVFAYNVALRNVLRAKQWQLAYGLFDEMRQRALSPDRYTY 188
Query: 182 STLLTMYVENQKFLEALSLFKEMKEIKCLLDLTT-CNIMIDVYGQLDMAKEADKLFWGMR 358
STL+T + + F +ALS ++M++ DL CN+
Sbjct: 189 STLITYFGKEGLFDDALSWLQKMEQDHVSGDLVLYCNL---------------------- 226
Query: 359 KIGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYGKTLEHE 538
I + + Y +AI +F ++ I ++V YNTMI ++GK
Sbjct: 227 -IELSRKLCDYT-------------KAISIFSRLKTSGITPDLVAYNTMINVFGKAKLFR 272
Query: 539 KANNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTML 718
+A LI+EM S G+ P+ ++YST+++++ + K A +F ++ +D M+
Sbjct: 273 EAQLLIKEMRSVGVLPDTVSYSTLLTMYVENQKFLEALSVFSEMNEVKCSLDLTTCNIMI 332
Query: 719 VAYERAGLVAHAKRLLHELKR----PDNIPRETAICILAGAGRIEEATWVFRQAVDAGEV 886
Y + + A RL +++ P+ + T + + A EA +FR
Sbjct: 333 DVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKSIE 392
Query: 887 KDIAVFEQMIDLFSKYRKYTNVVEVFEKMRGIGYFPNSNVIALVLNAYGKLHEFGKADGV 1066
+++ + MI ++ K ++ + ++M+ IG PN+ + +++ +GK+ + +A +
Sbjct: 393 QNVVTYNTMIKIYGKTLEHEKANNLIQEMQNIGIEPNAITYSTIISIWGKVGKLDRAAML 452
Query: 1067 YIELQDEGYVFSDEVHFQMLSLYGARRNFEMVEILFERLEMDPNINKKDLHLVVAGIYEG 1246
+ +L+ G ++ M+ Y + L L+ NI ++ +++A G
Sbjct: 453 FQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMILA----G 508
Query: 1247 ANRHNDASRIVNQMSDKG 1300
+ R +A+ + Q D G
Sbjct: 509 SGRIEEATWVFRQAFDAG 526
Score = 79.0 bits (193), Expect = 5e-12
Identities = 59/258 (22%), Positives = 117/258 (45%)
Frame = +2
Query: 2 LDYSKAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSY 181
L++ KA ++ ++ GI P+ + Y+++I+++GK A L ++R++GV D V Y
Sbjct: 409 LEHEKANNLIQEMQNIGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLY 468
Query: 182 STLLTMYVENQKFLEALSLFKEMKEIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRK 361
T++ Y A L E+K + T I+ G+++ EA +F
Sbjct: 469 QTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAIMILAG-SGRIE---EATWVFRQAFD 524
Query: 362 IGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYGKTLEHEK 541
G ++ + ++ +Y + I +F M+ N ++ YGK E EK
Sbjct: 525 AGELKDIAVFECMIELYSRNRKYTNLIEVFEKMRGTGYFPNSNVIALVLNAYGKLQEFEK 584
Query: 542 ANNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTMLV 721
A+ + +EMH G + + ++S++G + L++ L S + L+ +
Sbjct: 585 ADMVYKEMHEEGCVFSDEVHFQMLSLYGARRNYEMVETLYKMLDSDPNVNKKELHLVVAG 644
Query: 722 AYERAGLVAHAKRLLHEL 775
YE+A V A R+++ +
Sbjct: 645 IYEKANRVNDASRIVNRM 662
>gb|EXB47690.1| hypothetical protein L484_010474 [Morus notabilis]
Length = 688
Score = 734 bits (1894), Expect = 0.0
Identities = 367/433 (84%), Positives = 404/433 (93%)
Frame = +2
Query: 5 DYSKAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSYS 184
DYSKAISIFSRLK SGITPDLVAYNSMINVFGKAKLFREAR LI+EMR AGV+PDTVSYS
Sbjct: 251 DYSKAISIFSRLKWSGITPDLVAYNSMINVFGKAKLFREARLLITEMRAAGVLPDTVSYS 310
Query: 185 TLLTMYVENQKFLEALSLFKEMKEIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRKI 364
TLLTMYVENQKF+EALS+F EM E++C LDLTTCNIMIDVYGQLDMAKEAD+LFW MRK+
Sbjct: 311 TLLTMYVENQKFIEALSVFSEMNEVRCRLDLTTCNIMIDVYGQLDMAKEADRLFWSMRKM 370
Query: 365 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYGKTLEHEKA 544
GIEPNVVSYNTLLRVYG+AELFGEAIHLFRLMQRKDIEQNVVTYNTMI IYGK+LEHEKA
Sbjct: 371 GIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKSLEHEKA 430
Query: 545 NNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTMLVA 724
NL+QEM RGIEPNAITYSTIISIWGK GKLDRAA+LFQKLRSSG+EIDQVLYQTM+VA
Sbjct: 431 TNLVQEMQKRGIEPNAITYSTIISIWGKAGKLDRAAILFQKLRSSGVEIDQVLYQTMIVA 490
Query: 725 YERAGLVAHAKRLLHELKRPDNIPRETAICILAGAGRIEEATWVFRQAVDAGEVKDIAVF 904
YE+AGLVAHAKRLLHELKRPDNIPRETAI ILAGAGR+EEATWVFRQA DAGE+KDI+VF
Sbjct: 491 YEKAGLVAHAKRLLHELKRPDNIPRETAITILAGAGRLEEATWVFRQASDAGEIKDISVF 550
Query: 905 EQMIDLFSKYRKYTNVVEVFEKMRGIGYFPNSNVIALVLNAYGKLHEFGKADGVYIELQD 1084
MI+LFSK +KY N+ EVF+KMRG+GYFP+SNVIALVLNAYGKL +F KAD VY E+Q+
Sbjct: 551 SCMIELFSKNKKYANLTEVFDKMRGVGYFPDSNVIALVLNAYGKLRDFEKADAVYKEMQE 610
Query: 1085 EGYVFSDEVHFQMLSLYGARRNFEMVEILFERLEMDPNINKKDLHLVVAGIYEGANRHND 1264
EG VFSDEVHFQM+SLYGAR++F+MVE LFERLE DPNIN K+LHLVVAGIYE AN+ ND
Sbjct: 611 EGCVFSDEVHFQMISLYGARKDFKMVEELFERLESDPNIN-KELHLVVAGIYERANKLND 669
Query: 1265 ASRIVNQMSDKGI 1303
ASRI+N+M+D+GI
Sbjct: 670 ASRIMNRMNDRGI 682
Score = 124 bits (311), Expect = 1e-25
Identities = 95/437 (21%), Positives = 193/437 (44%), Gaps = 5/437 (1%)
Frame = +2
Query: 5 DYSKAISIFSRLKRSGI-TPDLVAYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSY 181
D+ ++++I + + TP + AYN + +AK ++ A L EMR + PD +Y
Sbjct: 145 DWQRSLAILDWINEQALYTPSVFAYNVALRNVLRAKQWQVAHGLFDEMRQRALAPDRYTY 204
Query: 182 STLLTMYVENQKFLEALSLFKEMKEIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRK 361
STL+T + + F ALS ++M++ + DL
Sbjct: 205 STLITYFGKEGMFDAALSWLQKMEQDRVSGDL---------------------------- 236
Query: 362 IGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYGKTLEHEK 541
V Y+ L+ + + +AI +F ++ I ++V YN+MI ++GK +
Sbjct: 237 -------VLYSNLIELSRKLCDYSKAISIFSRLKWSGITPDLVAYNSMINVFGKAKLFRE 289
Query: 542 ANNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTMLV 721
A LI EM + G+ P+ ++YST+++++ + K A +F ++ +D M+
Sbjct: 290 ARLLITEMRAAGVLPDTVSYSTLLTMYVENQKFIEALSVFSEMNEVRCRLDLTTCNIMID 349
Query: 722 AYERAGLVAHAKRLLHELKR----PDNIPRETAICILAGAGRIEEATWVFRQAVDAGEVK 889
Y + + A RL +++ P+ + T + + A EA +FR +
Sbjct: 350 VYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQ 409
Query: 890 DIAVFEQMIDLFSKYRKYTNVVEVFEKMRGIGYFPNSNVIALVLNAYGKLHEFGKADGVY 1069
++ + MI ++ K ++ + ++M+ G PN+ + +++ +GK + +A ++
Sbjct: 410 NVVTYNTMIKIYGKSLEHEKATNLVQEMQKRGIEPNAITYSTIISIWGKAGKLDRAAILF 469
Query: 1070 IELQDEGYVFSDEVHFQMLSLYGARRNFEMVEILFERLEMDPNINKKDLHLVVAGIYEGA 1249
+L+ G ++ M+ Y + L L+ NI ++ ++A GA
Sbjct: 470 QKLRSSGVEIDQVLYQTMIVAYEKAGLVAHAKRLLHELKRPDNIPRETAITILA----GA 525
Query: 1250 NRHNDASRIVNQMSDKG 1300
R +A+ + Q SD G
Sbjct: 526 GRLEEATWVFRQASDAG 542
Score = 94.4 bits (233), Expect = 1e-16
Identities = 77/338 (22%), Positives = 152/338 (44%), Gaps = 7/338 (2%)
Frame = +2
Query: 311 QLDMAKEADKLFWGMRKIGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVV 490
+ D + L W + P+V +YN LR A+ + A LF M+++ + +
Sbjct: 143 ETDWQRSLAILDWINEQALYTPSVFAYNVALRNVLRAKQWQVAHGLFDEMRQRALAPDRY 202
Query: 491 TYNTMIMIYGKTLEHEKANNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKL 670
TY+T+I +GK + A + +Q+M + + + YS +I + K+ +A +F +L
Sbjct: 203 TYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRL 262
Query: 671 RSSGIEIDQVLYQTMLVAYERAGLVAHAKRLLHELKR----PDNIPRETAICILAGAGRI 838
+ SGI D V Y +M+ + +A L A+ L+ E++ PD + T + + +
Sbjct: 263 KWSGITPDLVAYNSMINVFGKAKLFREARLLITEMRAAGVLPDTVSYSTLLTMYVENQKF 322
Query: 839 EEATWVFRQAVDAGEVKDIAVFEQMIDLFSKYRKYTNVVEVFEKMRGIGYFPNSNVIALV 1018
EA VF + + D+ MID++ + +F MR +G PN +
Sbjct: 323 IEALSVFSEMNEVRCRLDLTTCNIMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTL 382
Query: 1019 LNAYGKLHEFGKADGVYIELQDEGYVFSDEVHFQMLSLYGARRNFEMVEILFERLE---M 1189
L YG+ FG+A ++ +Q + + + M+ +YG E L + ++ +
Sbjct: 383 LRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQKRGI 442
Query: 1190 DPNINKKDLHLVVAGIYEGANRHNDASRIVNQMSDKGI 1303
+PN + + I+ A + + A+ + ++ G+
Sbjct: 443 EPN---AITYSTIISIWGKAGKLDRAAILFQKLRSSGV 477
Score = 79.3 bits (194), Expect = 4e-12
Identities = 59/258 (22%), Positives = 122/258 (47%)
Frame = +2
Query: 2 LDYSKAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSY 181
L++ KA ++ +++ GI P+ + Y+++I+++GKA A L ++R++GV D V Y
Sbjct: 425 LEHEKATNLVQEMQKRGIEPNAITYSTIISIWGKAGKLDRAAILFQKLRSSGVEIDQVLY 484
Query: 182 STLLTMYVENQKFLEALSLFKEMKEIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRK 361
T++ Y + A L E+K + T I+ G+L+ EA +F
Sbjct: 485 QTMIVAYEKAGLVAHAKRLLHELKRPDNIPRETAITILAGA-GRLE---EATWVFRQASD 540
Query: 362 IGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYGKTLEHEK 541
G ++ ++ ++ ++ + + +F M+ + ++ YGK + EK
Sbjct: 541 AGEIKDISVFSCMIELFSKNKKYANLTEVFDKMRGVGYFPDSNVIALVLNAYGKLRDFEK 600
Query: 542 ANNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTMLV 721
A+ + +EM G + + +IS++G LF++L S I++ L+ +
Sbjct: 601 ADAVYKEMQEEGCVFSDEVHFQMISLYGARKDFKMVEELFERLESDP-NINKELHLVVAG 659
Query: 722 AYERAGLVAHAKRLLHEL 775
YERA + A R+++ +
Sbjct: 660 IYERANKLNDASRIMNRM 677
>ref|XP_004232248.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Solanum lycopersicum]
Length = 665
Score = 733 bits (1891), Expect = 0.0
Identities = 367/432 (84%), Positives = 401/432 (92%)
Frame = +2
Query: 5 DYSKAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSYS 184
DY+KAISIFSRLK SGITPDLVAYN+MINVFGKAKLFREA+ L+ EMR+ GV+PDTVSYS
Sbjct: 232 DYTKAISIFSRLKTSGITPDLVAYNTMINVFGKAKLFREAQLLVKEMRSVGVLPDTVSYS 291
Query: 185 TLLTMYVENQKFLEALSLFKEMKEIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRKI 364
TLLTMYVENQKFLEALS+F EM E+KC LDLTTCNIMIDVYGQLDMAKEAD+LFW MRK+
Sbjct: 292 TLLTMYVENQKFLEALSVFSEMNEVKCPLDLTTCNIMIDVYGQLDMAKEADRLFWSMRKM 351
Query: 365 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYGKTLEHEKA 544
GIEPNVVSYNTLLRVYG+AELFGEAIHLFRLMQRK+IEQNVVTYNTMI IYGKTLEHEKA
Sbjct: 352 GIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKNIEQNVVTYNTMIKIYGKTLEHEKA 411
Query: 545 NNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTMLVA 724
NNLIQEM + GIEPNAITYSTIISIW KVGKLDRAAMLFQKLRSSG+EIDQVLYQTM+VA
Sbjct: 412 NNLIQEMQNIGIEPNAITYSTIISIWAKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVA 471
Query: 725 YERAGLVAHAKRLLHELKRPDNIPRETAICILAGAGRIEEATWVFRQAVDAGEVKDIAVF 904
YERAGLVAHAKRLLHELKRPDNIPRETAI ILAG+GRIEEATWVFRQA DAGE+KDIAVF
Sbjct: 472 YERAGLVAHAKRLLHELKRPDNIPRETAITILAGSGRIEEATWVFRQAFDAGELKDIAVF 531
Query: 905 EQMIDLFSKYRKYTNVVEVFEKMRGIGYFPNSNVIALVLNAYGKLHEFGKADGVYIELQD 1084
E MI+L+S+ RKYTN++EVFEKM G GYFPNSNVIALVLNAYGKL EF KAD VY E+ +
Sbjct: 532 ECMIELYSRNRKYTNLIEVFEKMSGAGYFPNSNVIALVLNAYGKLQEFEKADMVYKEMHE 591
Query: 1085 EGYVFSDEVHFQMLSLYGARRNFEMVEILFERLEMDPNINKKDLHLVVAGIYEGANRHND 1264
EG VFSDEVHFQMLSLYGARRN+EMVE L++ L+ DPN+NKK+LHLVVA IYE ANR ND
Sbjct: 592 EGCVFSDEVHFQMLSLYGARRNYEMVETLYKVLDSDPNVNKKELHLVVAAIYEKANRMND 651
Query: 1265 ASRIVNQMSDKG 1300
ASRI+N+M+ +G
Sbjct: 652 ASRIINRMTYRG 663
Score = 120 bits (300), Expect = 2e-24
Identities = 94/438 (21%), Positives = 194/438 (44%), Gaps = 6/438 (1%)
Frame = +2
Query: 5 DYSKAISIFSRLKRSGI-TPDLVAYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSY 181
D+ +++++ + + TP + AYN + +AK ++ A L EMR + PD +Y
Sbjct: 126 DWQRSLALLDWINEVALYTPSVFAYNVALRNVLRAKQWQLAYGLFDEMRQRALSPDRYTY 185
Query: 182 STLLTMYVENQKFLEALSLFKEMKEIKCLLDLTT-CNIMIDVYGQLDMAKEADKLFWGMR 358
STL+T + + F +ALS ++M++ DL CN+
Sbjct: 186 STLITYFGKEGLFDDALSWLQKMEQDHVSGDLVLYCNL---------------------- 223
Query: 359 KIGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYGKTLEHE 538
I + + Y +AI +F ++ I ++V YNTMI ++GK
Sbjct: 224 -IELSRKLCDYT-------------KAISIFSRLKTSGITPDLVAYNTMINVFGKAKLFR 269
Query: 539 KANNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTML 718
+A L++EM S G+ P+ ++YST+++++ + K A +F ++ +D M+
Sbjct: 270 EAQLLVKEMRSVGVLPDTVSYSTLLTMYVENQKFLEALSVFSEMNEVKCPLDLTTCNIMI 329
Query: 719 VAYERAGLVAHAKRLLHELKR----PDNIPRETAICILAGAGRIEEATWVFRQAVDAGEV 886
Y + + A RL +++ P+ + T + + A EA +FR
Sbjct: 330 DVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKNIE 389
Query: 887 KDIAVFEQMIDLFSKYRKYTNVVEVFEKMRGIGYFPNSNVIALVLNAYGKLHEFGKADGV 1066
+++ + MI ++ K ++ + ++M+ IG PN+ + +++ + K+ + +A +
Sbjct: 390 QNVVTYNTMIKIYGKTLEHEKANNLIQEMQNIGIEPNAITYSTIISIWAKVGKLDRAAML 449
Query: 1067 YIELQDEGYVFSDEVHFQMLSLYGARRNFEMVEILFERLEMDPNINKKDLHLVVAGIYEG 1246
+ +L+ G ++ M+ Y + L L+ NI ++ ++A G
Sbjct: 450 FQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAITILA----G 505
Query: 1247 ANRHNDASRIVNQMSDKG 1300
+ R +A+ + Q D G
Sbjct: 506 SGRIEEATWVFRQAFDAG 523
Score = 77.0 bits (188), Expect = 2e-11
Identities = 57/258 (22%), Positives = 115/258 (44%)
Frame = +2
Query: 2 LDYSKAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSY 181
L++ KA ++ ++ GI P+ + Y+++I+++ K A L ++R++GV D V Y
Sbjct: 406 LEHEKANNLIQEMQNIGIEPNAITYSTIISIWAKVGKLDRAAMLFQKLRSSGVEIDQVLY 465
Query: 182 STLLTMYVENQKFLEALSLFKEMKEIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRK 361
T++ Y A L E+K + T I+ G+++ EA +F
Sbjct: 466 QTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAITILAG-SGRIE---EATWVFRQAFD 521
Query: 362 IGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYGKTLEHEK 541
G ++ + ++ +Y + I +F M N ++ YGK E EK
Sbjct: 522 AGELKDIAVFECMIELYSRNRKYTNLIEVFEKMSGAGYFPNSNVIALVLNAYGKLQEFEK 581
Query: 542 ANNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTMLV 721
A+ + +EMH G + + ++S++G + L++ L S + L+ +
Sbjct: 582 ADMVYKEMHEEGCVFSDEVHFQMLSLYGARRNYEMVETLYKVLDSDPNVNKKELHLVVAA 641
Query: 722 AYERAGLVAHAKRLLHEL 775
YE+A + A R+++ +
Sbjct: 642 IYEKANRMNDASRIINRM 659
>ref|XP_002276556.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic [Vitis vinifera]
gi|296087770|emb|CBI35026.3| unnamed protein product
[Vitis vinifera]
Length = 675
Score = 723 bits (1866), Expect = 0.0
Identities = 362/433 (83%), Positives = 398/433 (91%)
Frame = +2
Query: 5 DYSKAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSYS 184
DYSKAISIFSRLKRSGI+PDLVAYNSMINVFGKAKLFREAR L+ EMR GVMPDTVSYS
Sbjct: 240 DYSKAISIFSRLKRSGISPDLVAYNSMINVFGKAKLFREARLLLPEMRAGGVMPDTVSYS 299
Query: 185 TLLTMYVENQKFLEALSLFKEMKEIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRKI 364
TLL+MYVEN K++EALS+F EM E++C LDLTTCN+MIDVYGQLDMAKEAD+LFW MRK+
Sbjct: 300 TLLSMYVENGKYVEALSVFSEMNEVRCPLDLTTCNVMIDVYGQLDMAKEADRLFWSMRKM 359
Query: 365 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYGKTLEHEKA 544
GIEP +VSYNTLLRVYG+AELFGEAIHLFRLMQRKDIEQNVVTYNTMI IYGK+LEHEKA
Sbjct: 360 GIEPGIVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKSLEHEKA 419
Query: 545 NNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTMLVA 724
NL+QEM +RGIEPNAITYSTIISIW K GKLDRAAMLFQKLRSSGIEIDQVLYQTM+VA
Sbjct: 420 TNLVQEMQNRGIEPNAITYSTIISIWDKAGKLDRAAMLFQKLRSSGIEIDQVLYQTMIVA 479
Query: 725 YERAGLVAHAKRLLHELKRPDNIPRETAICILAGAGRIEEATWVFRQAVDAGEVKDIAVF 904
YERAGLVAHAKRLLHELKRPDNIPRETAI ILAGAGRIEEATWVFRQA DAGEVKDI VF
Sbjct: 480 YERAGLVAHAKRLLHELKRPDNIPRETAITILAGAGRIEEATWVFRQAFDAGEVKDITVF 539
Query: 905 EQMIDLFSKYRKYTNVVEVFEKMRGIGYFPNSNVIALVLNAYGKLHEFGKADGVYIELQD 1084
MIDLFS+ RK+TNV+EVF+KMRG GYFP+SNVIALVLNA GKL EF KAD +Y E+++
Sbjct: 540 GCMIDLFSRNRKHTNVIEVFDKMRGAGYFPDSNVIALVLNACGKLREFEKADAIYKEMEE 599
Query: 1085 EGYVFSDEVHFQMLSLYGARRNFEMVEILFERLEMDPNINKKDLHLVVAGIYEGANRHND 1264
EG VFSDEVHFQMLSLYGAR +F+MV+ LFERL+ DPNINKK+LHLVVA IYE ANR ND
Sbjct: 600 EGCVFSDEVHFQMLSLYGARGDFQMVDSLFERLDSDPNINKKELHLVVASIYERANRLND 659
Query: 1265 ASRIVNQMSDKGI 1303
AS+I+N+M ++GI
Sbjct: 660 ASQIMNRMRERGI 672
Score = 72.0 bits (175), Expect = 6e-10
Identities = 55/259 (21%), Positives = 116/259 (44%)
Frame = +2
Query: 2 LDYSKAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSY 181
L++ KA ++ ++ GI P+ + Y+++I+++ KA A L ++R++G+ D V Y
Sbjct: 414 LEHEKATNLVQEMQNRGIEPNAITYSTIISIWDKAGKLDRAAMLFQKLRSSGIEIDQVLY 473
Query: 182 STLLTMYVENQKFLEALSLFKEMKEIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRK 361
T++ Y A L E+K + T I+ G+++ EA +F
Sbjct: 474 QTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAITILAGA-GRIE---EATWVFRQAFD 529
Query: 362 IGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYGKTLEHEK 541
G ++ + ++ ++ I +F M+ + ++ GK E EK
Sbjct: 530 AGEVKDITVFGCMIDLFSRNRKHTNVIEVFDKMRGAGYFPDSNVIALVLNACGKLREFEK 589
Query: 542 ANNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTMLV 721
A+ + +EM G + + ++S++G G LF++L S + L+ +
Sbjct: 590 ADAIYKEMEEEGCVFSDEVHFQMLSLYGARGDFQMVDSLFERLDSDPNINKKELHLVVAS 649
Query: 722 AYERAGLVAHAKRLLHELK 778
YERA + A ++++ ++
Sbjct: 650 IYERANRLNDASQIMNRMR 668
>gb|EMJ16220.1| hypothetical protein PRUPE_ppa003340mg [Prunus persica]
Length = 584
Score = 716 bits (1848), Expect = 0.0
Identities = 358/433 (82%), Positives = 394/433 (90%)
Frame = +2
Query: 5 DYSKAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSYS 184
DYSKAISIFSRLKR GI PDLVAYNSMINVFGKAKLFREAR L+ EMR GV+PDTVSYS
Sbjct: 149 DYSKAISIFSRLKRLGIMPDLVAYNSMINVFGKAKLFREARLLLKEMRAVGVLPDTVSYS 208
Query: 185 TLLTMYVENQKFLEALSLFKEMKEIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRKI 364
TLL+MY+ENQKF+EALS+F EM E+KC LDLTTCNIMIDVYGQLDMAKEAD+LFW MRK+
Sbjct: 209 TLLSMYIENQKFVEALSVFSEMNEVKCPLDLTTCNIMIDVYGQLDMAKEADRLFWSMRKM 268
Query: 365 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYGKTLEHEKA 544
G+EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQR DIEQNVVTYNTMI IYGK+LEHEKA
Sbjct: 269 GLEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRMDIEQNVVTYNTMIKIYGKSLEHEKA 328
Query: 545 NNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTMLVA 724
NL+QEM + GI+PNA+TYSTIISIWGK GKLDRAAMLFQKLRSSG+EIDQVLYQTM+VA
Sbjct: 329 TNLVQEMQNSGIQPNAMTYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVA 388
Query: 725 YERAGLVAHAKRLLHELKRPDNIPRETAICILAGAGRIEEATWVFRQAVDAGEVKDIAVF 904
YER GLVAHAKRLLHELKRPDNIPRETAI ILAGAGRIEEATWVFRQA DAGEVKDI+VF
Sbjct: 389 YERVGLVAHAKRLLHELKRPDNIPRETAITILAGAGRIEEATWVFRQAFDAGEVKDISVF 448
Query: 905 EQMIDLFSKYRKYTNVVEVFEKMRGIGYFPNSNVIALVLNAYGKLHEFGKADGVYIELQD 1084
MIDLFS+ RKY N +EVFEKMR GYFP SNVI LVLNA+GKL EF KAD +Y E+Q+
Sbjct: 449 GCMIDLFSRNRKYANCIEVFEKMRVAGYFPASNVIDLVLNAFGKLREFEKADALYREMQE 508
Query: 1085 EGYVFSDEVHFQMLSLYGARRNFEMVEILFERLEMDPNINKKDLHLVVAGIYEGANRHND 1264
EG VFSDEVHFQML+LYGAR++F+MVE LF+RL DPNINKK+LHLVVA IYE +NR ND
Sbjct: 509 EGCVFSDEVHFQMLTLYGARKDFKMVEALFKRLMCDPNINKKELHLVVASIYERSNRLND 568
Query: 1265 ASRIVNQMSDKGI 1303
ASRI+N+M+++GI
Sbjct: 569 ASRIMNKMNERGI 581
Score = 114 bits (286), Expect = 8e-23
Identities = 81/383 (21%), Positives = 177/383 (46%), Gaps = 4/383 (1%)
Frame = +2
Query: 164 PDTVSYSTLLTMYVENQKFLEALSLFKEMKEIKCLLDLTTCNIMIDVYGQLDMAKEADKL 343
P +Y+ ++ + +++ A LF+EM++ D T + +I +G+ M A
Sbjct: 62 PSVFAYNVVIRNVLRAKQWEIAHGLFEEMRQRALAPDRYTYSTLITSFGKAGMFDSALSW 121
Query: 344 FWGMRKIGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYGK 523
M + + ++V Y+ L+ + + +AI +F ++R I ++V YN+MI ++GK
Sbjct: 122 LQKMEQDHVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRLGIMPDLVAYNSMINVFGK 181
Query: 524 TLEHEKANNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVL 703
+A L++EM + G+ P+ ++YST++S++ + K A +F ++ +D
Sbjct: 182 AKLFREARLLLKEMRAVGVLPDTVSYSTLLSMYIENQKFVEALSVFSEMNEVKCPLDLTT 241
Query: 704 YQTMLVAYERAGLVAHAKRLLHELKR----PDNIPRETAICILAGAGRIEEATWVFRQAV 871
M+ Y + + A RL +++ P+ + T + + A EA +FR
Sbjct: 242 CNIMIDVYGQLDMAKEADRLFWSMRKMGLEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ 301
Query: 872 DAGEVKDIAVFEQMIDLFSKYRKYTNVVEVFEKMRGIGYFPNSNVIALVLNAYGKLHEFG 1051
+++ + MI ++ K ++ + ++M+ G PN+ + +++ +GK +
Sbjct: 302 RMDIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNSGIQPNAMTYSTIISIWGKAGKLD 361
Query: 1052 KADGVYIELQDEGYVFSDEVHFQMLSLYGARRNFEMVEILFERLEMDPNINKKDLHLVVA 1231
+A ++ +L+ G ++ M+ Y + L L+ NI ++ ++A
Sbjct: 362 RAAMLFQKLRSSGVEIDQVLYQTMIVAYERVGLVAHAKRLLHELKRPDNIPRETAITILA 421
Query: 1232 GIYEGANRHNDASRIVNQMSDKG 1300
GA R +A+ + Q D G
Sbjct: 422 ----GAGRIEEATWVFRQAFDAG 440
Score = 74.3 bits (181), Expect = 1e-10
Identities = 56/258 (21%), Positives = 118/258 (45%)
Frame = +2
Query: 2 LDYSKAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSY 181
L++ KA ++ ++ SGI P+ + Y+++I+++GKA A L ++R++GV D V Y
Sbjct: 323 LEHEKATNLVQEMQNSGIQPNAMTYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLY 382
Query: 182 STLLTMYVENQKFLEALSLFKEMKEIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRK 361
T++ Y A L E+K + T I+ G+++ EA +F
Sbjct: 383 QTMIVAYERVGLVAHAKRLLHELKRPDNIPRETAITILAGA-GRIE---EATWVFRQAFD 438
Query: 362 IGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYGKTLEHEK 541
G ++ + ++ ++ + I +F M+ + ++ +GK E EK
Sbjct: 439 AGEVKDISVFGCMIDLFSRNRKYANCIEVFEKMRVAGYFPASNVIDLVLNAFGKLREFEK 498
Query: 542 ANNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTMLV 721
A+ L +EM G + + +++++G LF++L + L+ +
Sbjct: 499 ADALYREMQEEGCVFSDEVHFQMLTLYGARKDFKMVEALFKRLMCDPNINKKELHLVVAS 558
Query: 722 AYERAGLVAHAKRLLHEL 775
YER+ + A R+++++
Sbjct: 559 IYERSNRLNDASRIMNKM 576
>gb|EOY03346.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao]
Length = 672
Score = 714 bits (1844), Expect = 0.0
Identities = 356/433 (82%), Positives = 395/433 (91%)
Frame = +2
Query: 5 DYSKAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSYS 184
DYSKAISIF++LKRSGI PDLV YNSMINVFGKAKLFREAR L+ EMR GVMPDTVSYS
Sbjct: 237 DYSKAISIFNKLKRSGIVPDLVCYNSMINVFGKAKLFREARLLVKEMRDVGVMPDTVSYS 296
Query: 185 TLLTMYVENQKFLEALSLFKEMKEIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRKI 364
T+L MYVEN KF+EALS+F EM E+KC LDLTTCNIMIDVYGQLDMAKEAD+LFWGMRK+
Sbjct: 297 TVLNMYVENHKFVEALSVFAEMNEVKCPLDLTTCNIMIDVYGQLDMAKEADRLFWGMRKM 356
Query: 365 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYGKTLEHEKA 544
GIEPNVVSYNTLL+VYG+AEL+GEAIHLFRLM RKDIEQNVVTYNTMI IYGK+LEHEKA
Sbjct: 357 GIEPNVVSYNTLLKVYGEAELYGEAIHLFRLMHRKDIEQNVVTYNTMIKIYGKSLEHEKA 416
Query: 545 NNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTMLVA 724
NL+QEM +RGIEPNAITYSTIISIWGK GKLDRAAMLFQKLRSSG+EIDQVLYQTM+VA
Sbjct: 417 YNLVQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVA 476
Query: 725 YERAGLVAHAKRLLHELKRPDNIPRETAICILAGAGRIEEATWVFRQAVDAGEVKDIAVF 904
YERAGLVAHAKRLLHELK+PDN+PR+TAI ILA AGRIEEATWVFRQA DAGEVKDI+VF
Sbjct: 477 YERAGLVAHAKRLLHELKQPDNLPRDTAIMILARAGRIEEATWVFRQACDAGEVKDISVF 536
Query: 905 EQMIDLFSKYRKYTNVVEVFEKMRGIGYFPNSNVIALVLNAYGKLHEFGKADGVYIELQD 1084
MIDLFS+ +K+ NV+EVFEKMR GYFP+SNVIALVLNAYGKL EF KAD VY E+Q+
Sbjct: 537 GLMIDLFSRNKKHANVIEVFEKMRSAGYFPDSNVIALVLNAYGKLREFDKADAVYKEMQE 596
Query: 1085 EGYVFSDEVHFQMLSLYGARRNFEMVEILFERLEMDPNINKKDLHLVVAGIYEGANRHND 1264
EG VF DEVHFQMLSL GAR++F+MVE LFE+L+ DPNINKK+LHLVVA IYE NR ND
Sbjct: 597 EGCVFPDEVHFQMLSLCGARKDFKMVESLFEKLDSDPNINKKELHLVVASIYERGNRLND 656
Query: 1265 ASRIVNQMSDKGI 1303
AS+I+N+MS++GI
Sbjct: 657 ASQIMNRMSERGI 669
Score = 115 bits (287), Expect = 6e-23
Identities = 80/383 (20%), Positives = 176/383 (45%), Gaps = 4/383 (1%)
Frame = +2
Query: 164 PDTVSYSTLLTMYVENQKFLEALSLFKEMKEIKCLLDLTTCNIMIDVYGQLDMAKEADKL 343
P +Y+ ++ V+ +++ A LF+EM+E D T + +I +G+ M A
Sbjct: 150 PSLFAYNVVIRNVVKAKQWAIAHGLFEEMREKGLTPDRFTYSTLITYFGKEGMFDSALSW 209
Query: 344 FWGMRKIGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYGK 523
M G+ ++V ++ L+ + + +AI +F ++R I ++V YN+MI ++GK
Sbjct: 210 LQKMENDGVSGDLVLFSNLIELSRKLRDYSKAISIFNKLKRSGIVPDLVCYNSMINVFGK 269
Query: 524 TLEHEKANNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVL 703
+A L++EM G+ P+ ++YST+++++ + K A +F ++ +D
Sbjct: 270 AKLFREARLLVKEMRDVGVMPDTVSYSTVLNMYVENHKFVEALSVFAEMNEVKCPLDLTT 329
Query: 704 YQTMLVAYERAGLVAHAKRLLHELKR----PDNIPRETAICILAGAGRIEEATWVFRQAV 871
M+ Y + + A RL +++ P+ + T + + A EA +FR
Sbjct: 330 CNIMIDVYGQLDMAKEADRLFWGMRKMGIEPNVVSYNTLLKVYGEAELYGEAIHLFRLMH 389
Query: 872 DAGEVKDIAVFEQMIDLFSKYRKYTNVVEVFEKMRGIGYFPNSNVIALVLNAYGKLHEFG 1051
+++ + MI ++ K ++ + ++M+ G PN+ + +++ +GK +
Sbjct: 390 RKDIEQNVVTYNTMIKIYGKSLEHEKAYNLVQEMQNRGIEPNAITYSTIISIWGKAGKLD 449
Query: 1052 KADGVYIELQDEGYVFSDEVHFQMLSLYGARRNFEMVEILFERLEMDPNINKKDLHLVVA 1231
+A ++ +L+ G ++ M+ Y + L L+ N+ + +++A
Sbjct: 450 RAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKQPDNLPRDTAIMILA 509
Query: 1232 GIYEGANRHNDASRIVNQMSDKG 1300
A R +A+ + Q D G
Sbjct: 510 ----RAGRIEEATWVFRQACDAG 528
Score = 101 bits (251), Expect = 9e-19
Identities = 84/393 (21%), Positives = 174/393 (44%), Gaps = 13/393 (3%)
Frame = +2
Query: 164 PDTVSYSTLLTMYVENQKFLEALSLFKEMKEIKCLLD-----LTTCNIMIDVYG-QLDMA 325
P ST L ++ ++ ++S + K++ LL + M+ + + D
Sbjct: 74 PKPSQNSTFLDHSIDMEELFASISKTQNGKDLFTLLSPYKTRQLSIRFMVSLLSRETDWQ 133
Query: 326 KEADKLFWGMRKIGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTM 505
+ L W + P++ +YN ++R A+ + A LF M+ K + + TY+T+
Sbjct: 134 RSLALLDWVNEEARYSPSLFAYNVVIRNVVKAKQWAIAHGLFEEMREKGLTPDRFTYSTL 193
Query: 506 IMIYGKTLEHEKANNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGI 685
I +GK + A + +Q+M + G+ + + +S +I + K+ +A +F KL+ SGI
Sbjct: 194 ITYFGKEGMFDSALSWLQKMENDGVSGDLVLFSNLIELSRKLRDYSKAISIFNKLKRSGI 253
Query: 686 EIDQVLYQTMLVAYERAGLVAHAKRLLHELK----RPDNIPRETAICILAGAGRIEEATW 853
D V Y +M+ + +A L A+ L+ E++ PD + T + + + EA
Sbjct: 254 VPDLVCYNSMINVFGKAKLFREARLLVKEMRDVGVMPDTVSYSTVLNMYVENHKFVEALS 313
Query: 854 VFRQAVDAGEVKDIAVFEQMIDLFSKYRKYTNVVEVFEKMRGIGYFPNSNVIALVLNAYG 1033
VF + + D+ MID++ + +F MR +G PN +L YG
Sbjct: 314 VFAEMNEVKCPLDLTTCNIMIDVYGQLDMAKEADRLFWGMRKMGIEPNVVSYNTLLKVYG 373
Query: 1034 KLHEFGKADGVYIELQDEGYVFSDEVHFQMLSLYGARRNFEMVEILFERLE---MDPNIN 1204
+ +G+A ++ + + + + M+ +YG E L + ++ ++PN
Sbjct: 374 EAELYGEAIHLFRLMHRKDIEQNVVTYNTMIKIYGKSLEHEKAYNLVQEMQNRGIEPN-- 431
Query: 1205 KKDLHLVVAGIYEGANRHNDASRIVNQMSDKGI 1303
+ + I+ A + + A+ + ++ G+
Sbjct: 432 -AITYSTIISIWGKAGKLDRAAMLFQKLRSSGV 463
Score = 73.6 bits (179), Expect = 2e-10
Identities = 57/301 (18%), Positives = 130/301 (43%), Gaps = 5/301 (1%)
Frame = +2
Query: 2 LDYSKAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSY 181
L++ KA ++ ++ GI P+ + Y+++I+++GKA A L ++R++GV D V Y
Sbjct: 411 LEHEKAYNLVQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLY 470
Query: 182 STLLTMYVENQKFLEALSLFKEMKEIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRK 361
T++ Y A L E+K
Sbjct: 471 QTMIVAYERAGLVAHAKRLLHELK------------------------------------ 494
Query: 362 IGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYGKTLEHEK 541
+P+ + +T + + A EA +FR +++ + MI ++ + +H
Sbjct: 495 ---QPDNLPRDTAIMILARAGRIEEATWVFRQACDAGEVKDISVFGLMIDLFSRNKKHAN 551
Query: 542 ANNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSG-IEIDQVLYQTML 718
+ ++M S G P++ + +++ +GK+ + D+A ++++++ G + D+V +Q +
Sbjct: 552 VIEVFEKMRSAGYFPDSNVIALVLNAYGKLREFDKADAVYKEMQEEGCVFPDEVHFQMLS 611
Query: 719 VAYERAGLVAHAKRLLHELKRPDNIPRETAICILAG----AGRIEEATWVFRQAVDAGEV 886
+ R + L +L NI ++ ++A R+ +A+ + + + G +
Sbjct: 612 LCGARKDF-KMVESLFEKLDSDPNINKKELHLVVASIYERGNRLNDASQIMNRMSERGIL 670
Query: 887 K 889
K
Sbjct: 671 K 671
>ref|XP_002324029.2| hypothetical protein POPTR_0017s11210g [Populus trichocarpa]
gi|550320029|gb|EEF04162.2| hypothetical protein
POPTR_0017s11210g [Populus trichocarpa]
Length = 639
Score = 710 bits (1833), Expect = 0.0
Identities = 356/433 (82%), Positives = 392/433 (90%)
Frame = +2
Query: 5 DYSKAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSYS 184
DYSKAISIF RLKRSGI PDLVAYNSMINVFGKAKLFREA+ L+ EMR GVMPDTVSYS
Sbjct: 202 DYSKAISIFMRLKRSGIMPDLVAYNSMINVFGKAKLFREAKLLMKEMREVGVMPDTVSYS 261
Query: 185 TLLTMYVENQKFLEALSLFKEMKEIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRKI 364
TLL++YVEN+KF+EALS+F EM E KC LDLTTCN+MIDVYGQLDMAKEAD+LFW MRK+
Sbjct: 262 TLLSVYVENEKFVEALSVFAEMNEAKCPLDLTTCNVMIDVYGQLDMAKEADRLFWSMRKM 321
Query: 365 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYGKTLEHEKA 544
GIEPNVVSYNTLLRVYG+ ELFGEAIHLFRLMQ+KDIEQNVVTYNTMI +YGK+LEHEKA
Sbjct: 322 GIEPNVVSYNTLLRVYGETELFGEAIHLFRLMQKKDIEQNVVTYNTMIKVYGKSLEHEKA 381
Query: 545 NNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTMLVA 724
NL+QEM +RGIEPNAITYSTIISIWGK GKLDRAAMLFQKLRSSG+EIDQVLYQTM+VA
Sbjct: 382 TNLMQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVA 441
Query: 725 YERAGLVAHAKRLLHELKRPDNIPRETAICILAGAGRIEEATWVFRQAVDAGEVKDIAVF 904
YER+GLVAHAKRLLHELK PD+IPRETAI ILA AGRIEEATWVFRQA DAGEVKDI+VF
Sbjct: 442 YERSGLVAHAKRLLHELKHPDSIPRETAIKILARAGRIEEATWVFRQAFDAGEVKDISVF 501
Query: 905 EQMIDLFSKYRKYTNVVEVFEKMRGIGYFPNSNVIALVLNAYGKLHEFGKADGVYIELQD 1084
M+DLFS+ RK NV+EVFEKMRG GYFP+SNVIALVLNAYGKLHEF KAD +Y E+Q+
Sbjct: 502 GCMVDLFSRNRKPANVIEVFEKMRGAGYFPDSNVIALVLNAYGKLHEFEKADALYKEMQE 561
Query: 1085 EGYVFSDEVHFQMLSLYGARRNFEMVEILFERLEMDPNINKKDLHLVVAGIYEGANRHND 1264
E VF DEVHFQMLSLYGAR++F M+E LFERL+ DPNINKK+LHLVVA IYE NR ND
Sbjct: 562 EECVFPDEVHFQMLSLYGARKDFMMIEALFERLDSDPNINKKELHLVVASIYERKNRLND 621
Query: 1265 ASRIVNQMSDKGI 1303
ASRI+N+MS G+
Sbjct: 622 ASRIMNRMSKGGV 634
Score = 72.4 bits (176), Expect = 5e-10
Identities = 57/261 (21%), Positives = 116/261 (44%), Gaps = 1/261 (0%)
Frame = +2
Query: 2 LDYSKAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSY 181
L++ KA ++ ++ GI P+ + Y+++I+++GKA A L ++R++GV D V Y
Sbjct: 376 LEHEKATNLMQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLY 435
Query: 182 STLLTMYVENQKFLEALSLFKEMKEIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRK 361
T++ Y + A L E+K D I + + +EA +F
Sbjct: 436 QTMIVAYERSGLVAHAKRLLHELKH----PDSIPRETAIKILARAGRIEEATWVFRQAFD 491
Query: 362 IGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYGKTLEHEK 541
G ++ + ++ ++ I +F M+ + ++ YGK E EK
Sbjct: 492 AGEVKDISVFGCMVDLFSRNRKPANVIEVFEKMRGAGYFPDSNVIALVLNAYGKLHEFEK 551
Query: 542 ANNLIQEMHSRG-IEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTML 718
A+ L +EM + P+ + + ++S++G LF++L S + L+ +
Sbjct: 552 ADALYKEMQEEECVFPDEVHFQ-MLSLYGARKDFMMIEALFERLDSDPNINKKELHLVVA 610
Query: 719 VAYERAGLVAHAKRLLHELKR 781
YER + A R+++ + +
Sbjct: 611 SIYERKNRLNDASRIMNRMSK 631
>ref|XP_004147489.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Cucumis sativus]
gi|449530101|ref|XP_004172035.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Cucumis sativus]
Length = 680
Score = 698 bits (1801), Expect = 0.0
Identities = 346/429 (80%), Positives = 388/429 (90%)
Frame = +2
Query: 5 DYSKAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSYS 184
DYSKAISIFSRLKRSGITPD+VAYN+MINVFGKAKLFREAR L+ EMR VMPDTVSYS
Sbjct: 244 DYSKAISIFSRLKRSGITPDIVAYNTMINVFGKAKLFREARFLLKEMRAVDVMPDTVSYS 303
Query: 185 TLLTMYVENQKFLEALSLFKEMKEIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRKI 364
TLL M+VEN+KFLEALS+ EMKE+ C LDLTTCNIMIDVYGQLDM KEAD+LFW MRKI
Sbjct: 304 TLLNMFVENEKFLEALSVISEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRMRKI 363
Query: 365 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYGKTLEHEKA 544
GIEPNVVSYNT+LRVYG+AELFGEAIHLFRLMQRK+I+QNVVTYNTMI IYGKTLEHEKA
Sbjct: 364 GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIKQNVVTYNTMIKIYGKTLEHEKA 423
Query: 545 NNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTMLVA 724
NL+Q+M RGIEPNAITYSTIISIWGK GKLDR+AMLFQKLRSSG EIDQVLYQTM+VA
Sbjct: 424 TNLVQDMQKRGIEPNAITYSTIISIWGKAGKLDRSAMLFQKLRSSGAEIDQVLYQTMIVA 483
Query: 725 YERAGLVAHAKRLLHELKRPDNIPRETAICILAGAGRIEEATWVFRQAVDAGEVKDIAVF 904
YE+AGLV HAKRLLHELK+PDNIPR TAI ILA AGRIEEATWVFRQA DAGE+KDI+VF
Sbjct: 484 YEKAGLVGHAKRLLHELKQPDNIPRTTAITILAKAGRIEEATWVFRQAFDAGELKDISVF 543
Query: 905 EQMIDLFSKYRKYTNVVEVFEKMRGIGYFPNSNVIALVLNAYGKLHEFGKADGVYIELQD 1084
E MIDLFS+ +K+ NV+EVFEKMR +G+FPNS+VIALVLNAYGKL +F AD +Y+E+Q+
Sbjct: 544 ECMIDLFSRNKKHKNVLEVFEKMRNVGHFPNSDVIALVLNAYGKLRDFDTADALYMEMQE 603
Query: 1085 EGYVFSDEVHFQMLSLYGARRNFEMVEILFERLEMDPNINKKDLHLVVAGIYEGANRHND 1264
EG VF+DEVHFQMLSLYGAR +++ +E LFERL+ DPNINKK+LHLVVA IYE NR D
Sbjct: 604 EGCVFTDEVHFQMLSLYGARNDYKRLESLFERLDSDPNINKKELHLVVASIYERGNRSKD 663
Query: 1265 ASRIVNQMS 1291
ASRI+N+M+
Sbjct: 664 ASRIINRMN 672
Score = 114 bits (286), Expect = 8e-23
Identities = 91/437 (20%), Positives = 190/437 (43%), Gaps = 5/437 (1%)
Frame = +2
Query: 5 DYSKAISIFSRLKRSGI-TPDLVAYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSY 181
D+ ++++I + + TP + AYN ++ +AK + A L EMR + D +Y
Sbjct: 138 DWQRSLAILDWINEEALYTPSVYAYNVVLRNVLRAKQWELAHGLFDEMRQRALAADRYTY 197
Query: 182 STLLTMYVENQKFLEALSLFKEMKEIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRK 361
STL+T + + F ALS ++M++ + DL
Sbjct: 198 STLITYFGKEGMFDAALSWLQKMEQDRVSGDL---------------------------- 229
Query: 362 IGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYGKTLEHEK 541
V Y+ L+ + + +AI +F ++R I ++V YNTMI ++GK +
Sbjct: 230 -------VLYSNLIELSRKLCDYSKAISIFSRLKRSGITPDIVAYNTMINVFGKAKLFRE 282
Query: 542 ANNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTMLV 721
A L++EM + + P+ ++YST+++++ + K A + +++ +D M+
Sbjct: 283 ARFLLKEMRAVDVMPDTVSYSTLLNMFVENEKFLEALSVISEMKEVNCPLDLTTCNIMID 342
Query: 722 AYERAGLVAHAKRLLHELKR----PDNIPRETAICILAGAGRIEEATWVFRQAVDAGEVK 889
Y + +V A RL +++ P+ + T + + A EA +FR +
Sbjct: 343 VYGQLDMVKEADRLFWRMRKIGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIKQ 402
Query: 890 DIAVFEQMIDLFSKYRKYTNVVEVFEKMRGIGYFPNSNVIALVLNAYGKLHEFGKADGVY 1069
++ + MI ++ K ++ + + M+ G PN+ + +++ +GK + ++ ++
Sbjct: 403 NVVTYNTMIKIYGKTLEHEKATNLVQDMQKRGIEPNAITYSTIISIWGKAGKLDRSAMLF 462
Query: 1070 IELQDEGYVFSDEVHFQMLSLYGARRNFEMVEILFERLEMDPNINKKDLHLVVAGIYEGA 1249
+L+ G ++ M+ Y + L L+ NI + ++A A
Sbjct: 463 QKLRSSGAEIDQVLYQTMIVAYEKAGLVGHAKRLLHELKQPDNIPRTTAITILA----KA 518
Query: 1250 NRHNDASRIVNQMSDKG 1300
R +A+ + Q D G
Sbjct: 519 GRIEEATWVFRQAFDAG 535
Score = 71.2 bits (173), Expect = 1e-09
Identities = 53/260 (20%), Positives = 114/260 (43%)
Frame = +2
Query: 2 LDYSKAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSY 181
L++ KA ++ +++ GI P+ + Y+++I+++GKA + L ++R++G D V Y
Sbjct: 418 LEHEKATNLVQDMQKRGIEPNAITYSTIISIWGKAGKLDRSAMLFQKLRSSGAEIDQVLY 477
Query: 182 STLLTMYVENQKFLEALSLFKEMKEIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRK 361
T++ Y + A L E+K+ + T I + + +EA +F
Sbjct: 478 QTMIVAYEKAGLVGHAKRLLHELKQPDNIPRTTA----ITILAKAGRIEEATWVFRQAFD 533
Query: 362 IGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYGKTLEHEK 541
G ++ + ++ ++ + + +F M+ N ++ YGK + +
Sbjct: 534 AGELKDISVFECMIDLFSRNKKHKNVLEVFEKMRNVGHFPNSDVIALVLNAYGKLRDFDT 593
Query: 542 ANNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTMLV 721
A+ L EM G + ++S++G R LF++L S + L+ +
Sbjct: 594 ADALYMEMQEEGCVFTDEVHFQMLSLYGARNDYKRLESLFERLDSDPNINKKELHLVVAS 653
Query: 722 AYERAGLVAHAKRLLHELKR 781
YER A R+++ + +
Sbjct: 654 IYERGNRSKDASRIINRMNK 673
>ref|XP_002517447.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223543458|gb|EEF44989.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 654
Score = 697 bits (1798), Expect = 0.0
Identities = 352/433 (81%), Positives = 389/433 (89%)
Frame = +2
Query: 5 DYSKAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSYS 184
DYSKAISIF RLKRSGITPDLVAYNSMINVFGKA+LFREAR L+ EMR GV+PDTVSYS
Sbjct: 219 DYSKAISIFMRLKRSGITPDLVAYNSMINVFGKARLFREARMLVHEMREVGVLPDTVSYS 278
Query: 185 TLLTMYVENQKFLEALSLFKEMKEIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRKI 364
TLL++YVEN+KF+EALS+F EM E C LDL TCNIMIDVYGQLDM KEAD+LFW MRK+
Sbjct: 279 TLLSVYVENEKFVEALSVFAEMNEANCSLDLMTCNIMIDVYGQLDMVKEADRLFWSMRKM 338
Query: 365 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYGKTLEHEKA 544
GIEPNVVSYNTLL+VYG+AELFGEAIHLFRLMQRK+IEQNVVTYNTMI IYGK+LEHEKA
Sbjct: 339 GIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 398
Query: 545 NNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTMLVA 724
NL+QEM RGIEPNAITYSTIISIWGK GKLDRAAMLFQKLRSSG+EIDQVLYQTM+VA
Sbjct: 399 TNLVQEMQKRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVA 458
Query: 725 YERAGLVAHAKRLLHELKRPDNIPRETAICILAGAGRIEEATWVFRQAVDAGEVKDIAVF 904
YERAGLVAHAKRLLH+LK PD IPR+TAI ILA AGRIEEATWVFRQA DAGEVKDI+VF
Sbjct: 459 YERAGLVAHAKRLLHDLKCPDIIPRDTAIKILARAGRIEEATWVFRQAFDAGEVKDISVF 518
Query: 905 EQMIDLFSKYRKYTNVVEVFEKMRGIGYFPNSNVIALVLNAYGKLHEFGKADGVYIELQD 1084
MI+LFS+ ++ NVVEVFEKMRG GYFP+S+VIALVLNAYGKL EF KAD VY E+Q+
Sbjct: 519 RCMIELFSRNKRPANVVEVFEKMRGAGYFPDSDVIALVLNAYGKLREFEKADAVYREMQE 578
Query: 1085 EGYVFSDEVHFQMLSLYGARRNFEMVEILFERLEMDPNINKKDLHLVVAGIYEGANRHND 1264
E VF DEVHFQMLSLYGAR++F MVE LFE+L+ DPNINKK+LHLVVA IYE NR ND
Sbjct: 579 EECVFPDEVHFQMLSLYGARKDFIMVESLFEKLDSDPNINKKELHLVVASIYERQNRLND 638
Query: 1265 ASRIVNQMSDKGI 1303
ASRI+N+MS +G+
Sbjct: 639 ASRIMNRMSKEGM 651
Score = 108 bits (271), Expect = 5e-21
Identities = 90/397 (22%), Positives = 175/397 (44%), Gaps = 8/397 (2%)
Frame = +2
Query: 137 SEMRTAGVMPDTVSYSTLLTMYVENQKFLEALSLFKEMKEIKCLLDLTTCNIMIDVYGQ- 313
++ T + +V LL + Q +E SL KE + + M+ + Q
Sbjct: 57 TQKTTPSYLDHSVDMKQLLISISQTQNEVELYSLLSPYKERQLSI-----RFMVSLISQE 111
Query: 314 LDMAKEADKLFWGMRKIGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVT 493
D + L W P+V +YN +LR A+ + A LF M+++ + + T
Sbjct: 112 ADWQRSLALLDWINEVARYSPSVFAYNVVLRNVLRAKKWDLAHGLFDEMRQRALSPDRYT 171
Query: 494 YNTMIMIYGKTLEHEKANNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLR 673
Y+T+I +GK +++ +Q+M + + + YS +I + K+ +A +F +L+
Sbjct: 172 YSTLITSFGKAGMFDESLFWLQQMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRLK 231
Query: 674 SSGIEIDQVLYQTMLVAYERAGLVAHAKRLLHELKR----PDNIPRETAICILAGAGRIE 841
SGI D V Y +M+ + +A L A+ L+HE++ PD + T + + +
Sbjct: 232 RSGITPDLVAYNSMINVFGKARLFREARMLVHEMREVGVLPDTVSYSTLLSVYVENEKFV 291
Query: 842 EATWVFRQAVDAGEVKDIAVFEQMIDLFSKYRKYTNVVEVFEKMRGIGYFPNSNVIALVL 1021
EA VF + +A D+ MID++ + +F MR +G PN +L
Sbjct: 292 EALSVFAEMNEANCSLDLMTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTLL 351
Query: 1022 NAYGKLHEFGKADGVYIELQDEGYVFSDEVHFQMLSLYGARRNFEMVEILFERLE---MD 1192
YG+ FG+A ++ +Q + + + M+ +YG E L + ++ ++
Sbjct: 352 KVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQKRGIE 411
Query: 1193 PNINKKDLHLVVAGIYEGANRHNDASRIVNQMSDKGI 1303
PN + + I+ A + + A+ + ++ G+
Sbjct: 412 PN---AITYSTIISIWGKAGKLDRAAMLFQKLRSSGV 445
Score = 74.3 bits (181), Expect = 1e-10
Identities = 56/261 (21%), Positives = 121/261 (46%), Gaps = 1/261 (0%)
Frame = +2
Query: 2 LDYSKAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSY 181
L++ KA ++ +++ GI P+ + Y+++I+++GKA A L ++R++GV D V Y
Sbjct: 393 LEHEKATNLVQEMQKRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLY 452
Query: 182 STLLTMYVENQKFLEALSLFKEMKEIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRK 361
T++ Y A L + ++KC D+ + I + + +EA +F
Sbjct: 453 QTMIVAYERAGLVAHAKRL---LHDLKC-PDIIPRDTAIKILARAGRIEEATWVFRQAFD 508
Query: 362 IGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYGKTLEHEK 541
G ++ + ++ ++ + + +F M+ + ++ YGK E EK
Sbjct: 509 AGEVKDISVFRCMIELFSRNKRPANVVEVFEKMRGAGYFPDSDVIALVLNAYGKLREFEK 568
Query: 542 ANNLIQEMHSRG-IEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTML 718
A+ + +EM + P+ + + ++S++G LF+KL S + L+ +
Sbjct: 569 ADAVYREMQEEECVFPDEVHFQ-MLSLYGARKDFIMVESLFEKLDSDPNINKKELHLVVA 627
Query: 719 VAYERAGLVAHAKRLLHELKR 781
YER + A R+++ + +
Sbjct: 628 SIYERQNRLNDASRIMNRMSK 648
>ref|NP_198814.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171449|sp|Q9FLD8.1|PP408_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g39980, chloroplastic; Flags: Precursor
gi|10176990|dbj|BAB10222.1| unnamed protein product
[Arabidopsis thaliana] gi|332007115|gb|AED94498.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 678
Score = 694 bits (1791), Expect = 0.0
Identities = 344/433 (79%), Positives = 389/433 (89%)
Frame = +2
Query: 5 DYSKAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSYS 184
DYSKAISIFSRLKRSGITPDLVAYNSMINV+GKAKLFREAR LI EM AGV+P+TVSYS
Sbjct: 240 DYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYS 299
Query: 185 TLLTMYVENQKFLEALSLFKEMKEIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRKI 364
TLL++YVEN KFLEALS+F EMKE+ C LDLTTCNIMIDVYGQLDM KEAD+LFW +RK+
Sbjct: 300 TLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKM 359
Query: 365 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYGKTLEHEKA 544
IEPNVVSYNT+LRVYG+AELFGEAIHLFRLMQRKDIEQNVVTYNTMI IYGKT+EHEKA
Sbjct: 360 DIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKA 419
Query: 545 NNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTMLVA 724
NL+QEM SRGIEPNAITYSTIISIWGK GKLDRAA LFQKLRSSG+EIDQVLYQTM+VA
Sbjct: 420 TNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVA 479
Query: 725 YERAGLVAHAKRLLHELKRPDNIPRETAICILAGAGRIEEATWVFRQAVDAGEVKDIAVF 904
YER GL+ HAKRLLHELK PDNIPRETAI ILA AGR EEATWVFRQA ++GEVKDI+VF
Sbjct: 480 YERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVF 539
Query: 905 EQMIDLFSKYRKYTNVVEVFEKMRGIGYFPNSNVIALVLNAYGKLHEFGKADGVYIELQD 1084
MI+L+S+ ++Y NV+EVFEKMR GYFP+SNVIA+VLNAYGK EF KAD VY E+Q+
Sbjct: 540 GCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQE 599
Query: 1085 EGYVFSDEVHFQMLSLYGARRNFEMVEILFERLEMDPNINKKDLHLVVAGIYEGANRHND 1264
EG VF DEVHFQMLSLY ++++FEMVE LF+RLE DPN+N K+LHLVVA +YE A++ ND
Sbjct: 600 EGCVFPDEVHFQMLSLYSSKKDFEMVESLFQRLESDPNVNSKELHLVVAALYERADKLND 659
Query: 1265 ASRIVNQMSDKGI 1303
ASR++N+M ++GI
Sbjct: 660 ASRVMNRMRERGI 672
Score = 85.1 bits (209), Expect = 7e-14
Identities = 59/260 (22%), Positives = 122/260 (46%), Gaps = 1/260 (0%)
Frame = +2
Query: 2 LDYSKAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSY 181
+++ KA ++ ++ GI P+ + Y+++I+++GKA A +L ++R++GV D V Y
Sbjct: 414 MEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLY 473
Query: 182 STLLTMYVENQKFLEALSLFKEMKEIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRK 361
T++ Y A L E+K L D I + + +EA +F +
Sbjct: 474 QTMIVAYERVGLMGHAKRLLHELK----LPDNIPRETAITILAKAGRTEEATWVFRQAFE 529
Query: 362 IGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYGKTLEHEK 541
G ++ + ++ +Y + + I +F M+ + ++ YGK E EK
Sbjct: 530 SGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEK 589
Query: 542 ANNLIQEMHSRG-IEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTML 718
A+ + +EM G + P+ + + ++S++ + LFQ+L S + L+ +
Sbjct: 590 ADTVYREMQEEGCVFPDEVHFQ-MLSLYSSKKDFEMVESLFQRLESDPNVNSKELHLVVA 648
Query: 719 VAYERAGLVAHAKRLLHELK 778
YERA + A R+++ ++
Sbjct: 649 ALYERADKLNDASRVMNRMR 668
>dbj|BAE98404.1| hypothetical protein [Arabidopsis thaliana]
Length = 546
Score = 694 bits (1791), Expect = 0.0
Identities = 344/433 (79%), Positives = 389/433 (89%)
Frame = +2
Query: 5 DYSKAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSYS 184
DYSKAISIFSRLKRSGITPDLVAYNSMINV+GKAKLFREAR LI EM AGV+P+TVSYS
Sbjct: 108 DYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYS 167
Query: 185 TLLTMYVENQKFLEALSLFKEMKEIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRKI 364
TLL++YVEN KFLEALS+F EMKE+ C LDLTTCNIMIDVYGQLDM KEAD+LFW +RK+
Sbjct: 168 TLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKM 227
Query: 365 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYGKTLEHEKA 544
IEPNVVSYNT+LRVYG+AELFGEAIHLFRLMQRKDIEQNVVTYNTMI IYGKT+EHEKA
Sbjct: 228 DIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKA 287
Query: 545 NNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTMLVA 724
NL+QEM SRGIEPNAITYSTIISIWGK GKLDRAA LFQKLRSSG+EIDQVLYQTM+VA
Sbjct: 288 TNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVA 347
Query: 725 YERAGLVAHAKRLLHELKRPDNIPRETAICILAGAGRIEEATWVFRQAVDAGEVKDIAVF 904
YER GL+ HAKRLLHELK PDNIPRETAI ILA AGR EEATWVFRQA ++GEVKDI+VF
Sbjct: 348 YERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVF 407
Query: 905 EQMIDLFSKYRKYTNVVEVFEKMRGIGYFPNSNVIALVLNAYGKLHEFGKADGVYIELQD 1084
MI+L+S+ ++Y NV+EVFEKMR GYFP+SNVIA+VLNAYGK EF KAD VY E+Q+
Sbjct: 408 GCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQE 467
Query: 1085 EGYVFSDEVHFQMLSLYGARRNFEMVEILFERLEMDPNINKKDLHLVVAGIYEGANRHND 1264
EG VF DEVHFQMLSLY ++++FEMVE LF+RLE DPN+N K+LHLVVA +YE A++ ND
Sbjct: 468 EGCVFPDEVHFQMLSLYSSKKDFEMVESLFQRLESDPNVNSKELHLVVAALYERADKLND 527
Query: 1265 ASRIVNQMSDKGI 1303
ASR++N+M ++GI
Sbjct: 528 ASRVMNRMRERGI 540
Score = 85.1 bits (209), Expect = 7e-14
Identities = 59/260 (22%), Positives = 122/260 (46%), Gaps = 1/260 (0%)
Frame = +2
Query: 2 LDYSKAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSY 181
+++ KA ++ ++ GI P+ + Y+++I+++GKA A +L ++R++GV D V Y
Sbjct: 282 MEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLY 341
Query: 182 STLLTMYVENQKFLEALSLFKEMKEIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRK 361
T++ Y A L E+K L D I + + +EA +F +
Sbjct: 342 QTMIVAYERVGLMGHAKRLLHELK----LPDNIPRETAITILAKAGRTEEATWVFRQAFE 397
Query: 362 IGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYGKTLEHEK 541
G ++ + ++ +Y + + I +F M+ + ++ YGK E EK
Sbjct: 398 SGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEK 457
Query: 542 ANNLIQEMHSRG-IEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTML 718
A+ + +EM G + P+ + + ++S++ + LFQ+L S + L+ +
Sbjct: 458 ADTVYREMQEEGCVFPDEVHFQ-MLSLYSSKKDFEMVESLFQRLESDPNVNSKELHLVVA 516
Query: 719 VAYERAGLVAHAKRLLHELK 778
YERA + A R+++ ++
Sbjct: 517 ALYERADKLNDASRVMNRMR 536
>ref|XP_004304956.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 672
Score = 693 bits (1788), Expect = 0.0
Identities = 341/433 (78%), Positives = 387/433 (89%)
Frame = +2
Query: 5 DYSKAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSYS 184
DY+KAI+IFSRLKR GI PDLVA+NSMINVFGKAKLFREAR L+ EMR GV PDTVSYS
Sbjct: 237 DYTKAIAIFSRLKRMGIVPDLVAFNSMINVFGKAKLFREARGLLKEMRAVGVAPDTVSYS 296
Query: 185 TLLTMYVENQKFLEALSLFKEMKEIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRKI 364
TLLTMYVEN+KFLEAL +F+EM E+KC LD+TTCN+MIDVYGQLDMAKEAD+LFW MRK+
Sbjct: 297 TLLTMYVENEKFLEALGVFREMSEVKCGLDITTCNVMIDVYGQLDMAKEADRLFWSMRKM 356
Query: 365 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYGKTLEHEKA 544
IEPNVVSYNTLLRVYGDAELFGEAIHLFR+MQR D+EQNVVTYNTMI IYGK+LEHEKA
Sbjct: 357 VIEPNVVSYNTLLRVYGDAELFGEAIHLFRMMQRMDVEQNVVTYNTMIRIYGKSLEHEKA 416
Query: 545 NNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTMLVA 724
NL+QEM RGI+PNAITYSTIISIWG+ GKLDRAAMLFQKLR+SG+EIDQVLYQTM+V+
Sbjct: 417 TNLVQEMQKRGIQPNAITYSTIISIWGRAGKLDRAAMLFQKLRNSGVEIDQVLYQTMIVS 476
Query: 725 YERAGLVAHAKRLLHELKRPDNIPRETAICILAGAGRIEEATWVFRQAVDAGEVKDIAVF 904
YER GLVAHAKRLLHELKRPDNIPRETAI ILA AGR+EEATWVFRQA +AG+VKDI+VF
Sbjct: 477 YERVGLVAHAKRLLHELKRPDNIPRETAITILARAGRVEEATWVFRQAFEAGQVKDISVF 536
Query: 905 EQMIDLFSKYRKYTNVVEVFEKMRGIGYFPNSNVIALVLNAYGKLHEFGKADGVYIELQD 1084
MI+L+S+ RKY N +EVFE MR GYFP S+VI LVLNAYGKL EF KAD VY E+Q+
Sbjct: 537 GCMIELYSRNRKYANCIEVFENMRVAGYFPASHVIGLVLNAYGKLREFEKADAVYREMQE 596
Query: 1085 EGYVFSDEVHFQMLSLYGARRNFEMVEILFERLEMDPNINKKDLHLVVAGIYEGANRHND 1264
EG VFSDE+HFQMLSLYGAR++F+ VE +FERL DPNINKK+LHLVVAGIYE +NR ND
Sbjct: 597 EGCVFSDEIHFQMLSLYGARKDFKTVEAMFERLVCDPNINKKELHLVVAGIYERSNRLND 656
Query: 1265 ASRIVNQMSDKGI 1303
+ RI+N+M++ +
Sbjct: 657 SHRIMNRMNESRV 669
Score = 109 bits (272), Expect = 3e-21
Identities = 89/437 (20%), Positives = 194/437 (44%), Gaps = 5/437 (1%)
Frame = +2
Query: 5 DYSKAISIFSRLKRSGI-TPDLVAYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSY 181
D+ ++++I + + TP + AYN ++ +A + A L EMR + PD +Y
Sbjct: 131 DWRRSLAILDWINDVALYTPSVFAYNVVLRNVLRAGQWDLAHGLFDEMRHRALAPDRYTY 190
Query: 182 STLLTMYVENQKFLEALSLFKEMKEIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRK 361
STL+T + + F ALS ++M++ + DL
Sbjct: 191 STLITAFGKAGMFDAALSWLQKMEQDRVSGDL---------------------------- 222
Query: 362 IGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYGKTLEHEK 541
V Y+ L+ + + +AI +F ++R I ++V +N+MI ++GK +
Sbjct: 223 -------VLYSNLIELSRKLCDYTKAIAIFSRLKRMGIVPDLVAFNSMINVFGKAKLFRE 275
Query: 542 ANNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTMLV 721
A L++EM + G+ P+ ++YST+++++ + K A +F+++ +D M+
Sbjct: 276 ARGLLKEMRAVGVAPDTVSYSTLLTMYVENEKFLEALGVFREMSEVKCGLDITTCNVMID 335
Query: 722 AYERAGLVAHAKRLLHELKR----PDNIPRETAICILAGAGRIEEATWVFRQAVDAGEVK 889
Y + + A RL +++ P+ + T + + A EA +FR +
Sbjct: 336 VYGQLDMAKEADRLFWSMRKMVIEPNVVSYNTLLRVYGDAELFGEAIHLFRMMQRMDVEQ 395
Query: 890 DIAVFEQMIDLFSKYRKYTNVVEVFEKMRGIGYFPNSNVIALVLNAYGKLHEFGKADGVY 1069
++ + MI ++ K ++ + ++M+ G PN+ + +++ +G+ + +A ++
Sbjct: 396 NVVTYNTMIRIYGKSLEHEKATNLVQEMQKRGIQPNAITYSTIISIWGRAGKLDRAAMLF 455
Query: 1070 IELQDEGYVFSDEVHFQMLSLYGARRNFEMVEILFERLEMDPNINKKDLHLVVAGIYEGA 1249
+L++ G ++ M+ Y + L L+ NI ++ ++A A
Sbjct: 456 QKLRNSGVEIDQVLYQTMIVSYERVGLVAHAKRLLHELKRPDNIPRETAITILA----RA 511
Query: 1250 NRHNDASRIVNQMSDKG 1300
R +A+ + Q + G
Sbjct: 512 GRVEEATWVFRQAFEAG 528
Score = 73.2 bits (178), Expect = 3e-10
Identities = 53/258 (20%), Positives = 113/258 (43%)
Frame = +2
Query: 2 LDYSKAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSY 181
L++ KA ++ +++ GI P+ + Y+++I+++G+A A L ++R +GV D V Y
Sbjct: 411 LEHEKATNLVQEMQKRGIQPNAITYSTIISIWGRAGKLDRAAMLFQKLRNSGVEIDQVLY 470
Query: 182 STLLTMYVENQKFLEALSLFKEMKEIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRK 361
T++ Y A L E+K D I + + +EA +F +
Sbjct: 471 QTMIVSYERVGLVAHAKRLLHELKR----PDNIPRETAITILARAGRVEEATWVFRQAFE 526
Query: 362 IGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYGKTLEHEK 541
G ++ + ++ +Y + I +F M+ ++ YGK E EK
Sbjct: 527 AGQVKDISVFGCMIELYSRNRKYANCIEVFENMRVAGYFPASHVIGLVLNAYGKLREFEK 586
Query: 542 ANNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTMLV 721
A+ + +EM G + + ++S++G +F++L + L+ +
Sbjct: 587 ADAVYREMQEEGCVFSDEIHFQMLSLYGARKDFKTVEAMFERLVCDPNINKKELHLVVAG 646
Query: 722 AYERAGLVAHAKRLLHEL 775
YER+ + + R+++ +
Sbjct: 647 IYERSNRLNDSHRIMNRM 664
>ref|XP_006286056.1| hypothetical protein CARUB_v10007588mg [Capsella rubella]
gi|482554761|gb|EOA18954.1| hypothetical protein
CARUB_v10007588mg [Capsella rubella]
Length = 679
Score = 689 bits (1779), Expect = 0.0
Identities = 341/433 (78%), Positives = 389/433 (89%)
Frame = +2
Query: 5 DYSKAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSYS 184
DYSKAISIFSRLK+SGITPDLVAYNSMINV+GKAKLFREAR LI EM AGV+P+TVSYS
Sbjct: 242 DYSKAISIFSRLKKSGITPDLVAYNSMINVYGKAKLFREARLLIKEMTEAGVLPNTVSYS 301
Query: 185 TLLTMYVENQKFLEALSLFKEMKEIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRKI 364
TLL++YVENQKFLEALS+F EMKE+ C LDLTTCNIMIDVYGQLDM KEAD+LFW +RK+
Sbjct: 302 TLLSVYVENQKFLEALSVFAEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSLRKM 361
Query: 365 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYGKTLEHEKA 544
IEPNVVSYNT+LRVYG+AELFGEAIHLFRLMQRKDIEQNVVTYNTMI IYGKT+EHEKA
Sbjct: 362 DIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKA 421
Query: 545 NNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTMLVA 724
NL++EM SRGIEPNAITYSTIISIWGK GKLDRAA LFQKLRSSG+EIDQVLYQTM+VA
Sbjct: 422 TNLVREMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVA 481
Query: 725 YERAGLVAHAKRLLHELKRPDNIPRETAICILAGAGRIEEATWVFRQAVDAGEVKDIAVF 904
YER GL+ HAKRLLHELK PDNIPRETAI ILA AGR EEATWVFRQA ++GEVKDI+VF
Sbjct: 482 YERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVF 541
Query: 905 EQMIDLFSKYRKYTNVVEVFEKMRGIGYFPNSNVIALVLNAYGKLHEFGKADGVYIELQD 1084
MI+L+S+ ++Y NV+EVFEKMR GYFP+SN IA+VLNAYGK EF KAD VY E+Q+
Sbjct: 542 GCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNAIAMVLNAYGKQREFEKADTVYREMQE 601
Query: 1085 EGYVFSDEVHFQMLSLYGARRNFEMVEILFERLEMDPNINKKDLHLVVAGIYEGANRHND 1264
EG VF DEVHFQMLSLY ++++FEMVE LF+RLE +PN+N K+LHLVVA +YE A++ ND
Sbjct: 602 EGCVFPDEVHFQMLSLYSSKKDFEMVETLFQRLESEPNVNSKELHLVVAALYERADKLND 661
Query: 1265 ASRIVNQMSDKGI 1303
ASR++N+M ++GI
Sbjct: 662 ASRVMNRMRERGI 674
Score = 84.7 bits (208), Expect = 9e-14
Identities = 59/260 (22%), Positives = 122/260 (46%), Gaps = 1/260 (0%)
Frame = +2
Query: 2 LDYSKAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSY 181
+++ KA ++ ++ GI P+ + Y+++I+++GKA A +L ++R++GV D V Y
Sbjct: 416 MEHEKATNLVREMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLY 475
Query: 182 STLLTMYVENQKFLEALSLFKEMKEIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRK 361
T++ Y A L E+K L D I + + +EA +F +
Sbjct: 476 QTMIVAYERVGLMGHAKRLLHELK----LPDNIPRETAITILAKAGRTEEATWVFRQAFE 531
Query: 362 IGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYGKTLEHEK 541
G ++ + ++ +Y + + I +F M+ + ++ YGK E EK
Sbjct: 532 SGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNAIAMVLNAYGKQREFEK 591
Query: 542 ANNLIQEMHSRG-IEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTML 718
A+ + +EM G + P+ + + ++S++ + LFQ+L S + L+ +
Sbjct: 592 ADTVYREMQEEGCVFPDEVHFQ-MLSLYSSKKDFEMVETLFQRLESEPNVNSKELHLVVA 650
Query: 719 VAYERAGLVAHAKRLLHELK 778
YERA + A R+++ ++
Sbjct: 651 ALYERADKLNDASRVMNRMR 670
>ref|XP_006431055.1| hypothetical protein CICLE_v10011224mg [Citrus clementina]
gi|557533112|gb|ESR44295.1| hypothetical protein
CICLE_v10011224mg [Citrus clementina]
Length = 677
Score = 689 bits (1778), Expect = 0.0
Identities = 344/431 (79%), Positives = 387/431 (89%)
Frame = +2
Query: 5 DYSKAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSYS 184
DYSKAISIFSRLK SGI PDLVAYN+MINVFGKAKLF+EAR LI EMR GV PDTVSYS
Sbjct: 239 DYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYS 298
Query: 185 TLLTMYVENQKFLEALSLFKEMKEIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRKI 364
TLL +YVEN KF+EALS+F EM E+ C LDLTTCNIMIDVYGQLDMAK+AD+LFW MRK+
Sbjct: 299 TLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKM 358
Query: 365 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYGKTLEHEKA 544
GI+P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK+IEQNVVTYNTMI IYGK+LEHEKA
Sbjct: 359 GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 418
Query: 545 NNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTMLVA 724
NL+QEM +RGIEPNAITYSTII+IWGK GKLDRAAMLFQKLRSSG+EID VLYQTM+VA
Sbjct: 419 TNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVA 478
Query: 725 YERAGLVAHAKRLLHELKRPDNIPRETAICILAGAGRIEEATWVFRQAVDAGEVKDIAVF 904
YER GLVAHAKRLLHEL++PD IPRETAI ILA AGRIEEATWVFRQA DAGEVKDI+VF
Sbjct: 479 YERVGLVAHAKRLLHELRQPDTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVF 538
Query: 905 EQMIDLFSKYRKYTNVVEVFEKMRGIGYFPNSNVIALVLNAYGKLHEFGKADGVYIELQD 1084
MI+LFS+ +KY NV+EVFEKMR GYFP+S++IALVLN+YGKL EF AD +Y E+Q+
Sbjct: 539 GCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 598
Query: 1085 EGYVFSDEVHFQMLSLYGARRNFEMVEILFERLEMDPNINKKDLHLVVAGIYEGANRHND 1264
EG VFSD+VHFQMLSLYGAR++F M+E LFERL+ D NINKK+LH VVAGIYE ANR ND
Sbjct: 599 EGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLND 658
Query: 1265 ASRIVNQMSDK 1297
ASRI+N+M+ +
Sbjct: 659 ASRIMNRMNKR 669
Score = 122 bits (307), Expect = 3e-25
Identities = 92/437 (21%), Positives = 190/437 (43%), Gaps = 5/437 (1%)
Frame = +2
Query: 5 DYSKAISIFSRLKRSG-ITPDLVAYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSY 181
+Y ++++I + +P + AYN ++ +AK + A L EMR G+ PD +Y
Sbjct: 133 NYQRSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTY 192
Query: 182 STLLTMYVENQKFLEALSLFKEMKEIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRK 361
STL+T + + F A+S ++M++ + DL
Sbjct: 193 STLITCFGKEGMFDSAISWLQQMEQDRVSGDL---------------------------- 224
Query: 362 IGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYGKTLEHEK 541
V Y+ L+ + + +AI +F ++ I ++V YNTMI ++GK ++
Sbjct: 225 -------VLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKE 277
Query: 542 ANNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTMLV 721
A LI+EM +G++P+ ++YST+++++ + K A +F ++ +D M+
Sbjct: 278 ARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMID 337
Query: 722 AYERAGLVAHAKRLLHELKR----PDNIPRETAICILAGAGRIEEATWVFRQAVDAGEVK 889
Y + + A RL +++ P + T + + A EA +FR +
Sbjct: 338 VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQ 397
Query: 890 DIAVFEQMIDLFSKYRKYTNVVEVFEKMRGIGYFPNSNVIALVLNAYGKLHEFGKADGVY 1069
++ + MI ++ K ++ + ++M+ G PN+ + ++ +GK + +A ++
Sbjct: 398 NVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLF 457
Query: 1070 IELQDEGYVFSDEVHFQMLSLYGARRNFEMVEILFERLEMDPNINKKDLHLVVAGIYEGA 1249
+L+ G ++ M+ Y + L L I ++ ++A A
Sbjct: 458 QKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPDTIPRETAITILA----RA 513
Query: 1250 NRHNDASRIVNQMSDKG 1300
R +A+ + Q D G
Sbjct: 514 GRIEEATWVFRQAFDAG 530
Score = 104 bits (260), Expect = 9e-20
Identities = 78/328 (23%), Positives = 153/328 (46%), Gaps = 7/328 (2%)
Frame = +2
Query: 341 LFWGMRKIGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYG 520
L W + P+V +YN +LR A+ + A LF M+++ I + TY+T+I +G
Sbjct: 141 LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 200
Query: 521 KTLEHEKANNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQV 700
K + A + +Q+M + + + YS +I + K+ +A +F +L+SSGI D V
Sbjct: 201 KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 260
Query: 701 LYQTMLVAYERAGLVAHAKRLLHELK----RPDNIPRETAICILAGAGRIEEATWVFRQA 868
Y TM+ + +A L A+ L+ E++ +PD + T + + + EA VF +
Sbjct: 261 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 320
Query: 869 VDAGEVKDIAVFEQMIDLFSKYRKYTNVVEVFEKMRGIGYFPNSNVIALVLNAYGKLHEF 1048
+ D+ MID++ + + +F MR +G P+ +L YG+ F
Sbjct: 321 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 380
Query: 1049 GKADGVYIELQDEGYVFSDEVHFQMLSLYGARRNFEMVEILFERLE---MDPNINKKDLH 1219
G+A ++ +Q + + + M+ +YG E L + ++ ++PN +
Sbjct: 381 GEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN---AITY 437
Query: 1220 LVVAGIYEGANRHNDASRIVNQMSDKGI 1303
+ I+ A + + A+ + ++ G+
Sbjct: 438 STIIAIWGKAGKLDRAAMLFQKLRSSGV 465
Score = 80.5 bits (197), Expect = 2e-12
Identities = 56/260 (21%), Positives = 116/260 (44%)
Frame = +2
Query: 2 LDYSKAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSY 181
L++ KA ++ ++ GI P+ + Y+++I ++GKA A L ++R++GV D V Y
Sbjct: 413 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 472
Query: 182 STLLTMYVENQKFLEALSLFKEMKEIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRK 361
T++ Y A L E+++ D I + + +EA +F
Sbjct: 473 QTMIVAYERVGLVAHAKRLLHELRQ----PDTIPRETAITILARAGRIEEATWVFRQAFD 528
Query: 362 IGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYGKTLEHEK 541
G ++ + ++ ++ + + I +F M+ + ++ YGK E E
Sbjct: 529 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 588
Query: 542 ANNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTMLV 721
A++L EM G + + ++S++G + LF++L S + L+ +
Sbjct: 589 ADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAG 648
Query: 722 AYERAGLVAHAKRLLHELKR 781
YERA + A R+++ + +
Sbjct: 649 IYERANRLNDASRIMNRMNK 668
>ref|XP_006405566.1| hypothetical protein EUTSA_v10028245mg [Eutrema salsugineum]
gi|557106704|gb|ESQ47019.1| hypothetical protein
EUTSA_v10028245mg [Eutrema salsugineum]
Length = 683
Score = 689 bits (1778), Expect = 0.0
Identities = 342/433 (78%), Positives = 386/433 (89%)
Frame = +2
Query: 5 DYSKAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSYS 184
DYSKAISIFSRLK+SGITPDLVAYNSMINV+GKAKLFREAR LI EM+ AGV P+TVSYS
Sbjct: 245 DYSKAISIFSRLKKSGITPDLVAYNSMINVYGKAKLFREARLLIKEMKEAGVEPNTVSYS 304
Query: 185 TLLTMYVENQKFLEALSLFKEMKEIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRKI 364
TLL++YVENQKFLEALS+F EMKE+ C LDLTTCN+MIDVYGQLDM KEAD+LFW MRK+
Sbjct: 305 TLLSVYVENQKFLEALSVFAEMKEVNCPLDLTTCNVMIDVYGQLDMVKEADRLFWSMRKM 364
Query: 365 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYGKTLEHEKA 544
IEPNVVSYNT+LRVYG+A+L GEAIHLFRLMQRKDIEQNVVTYNTMI +YGKTLEHEKA
Sbjct: 365 DIEPNVVSYNTILRVYGEADLIGEAIHLFRLMQRKDIEQNVVTYNTMIKMYGKTLEHEKA 424
Query: 545 NNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTMLVA 724
NL+QEM SRGIEPNAITYSTIISIWGK GKLDRAA LFQKLR SG+EIDQVLYQTM+VA
Sbjct: 425 TNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRRSGVEIDQVLYQTMIVA 484
Query: 725 YERAGLVAHAKRLLHELKRPDNIPRETAICILAGAGRIEEATWVFRQAVDAGEVKDIAVF 904
YER GL+ HAKRLL ELK+PDNIPRETAI ILA AGRIEEATWVFRQA ++GEVKDI VF
Sbjct: 485 YERVGLMGHAKRLLQELKQPDNIPRETAITILAKAGRIEEATWVFRQAFESGEVKDITVF 544
Query: 905 EQMIDLFSKYRKYTNVVEVFEKMRGIGYFPNSNVIALVLNAYGKLHEFGKADGVYIELQD 1084
MI L+S+ ++Y NV+EVFEKMR GYFP+SN IA+VLNAYGK EF KAD VY E+Q+
Sbjct: 545 GCMISLYSRNQRYVNVIEVFEKMRSAGYFPDSNAIAIVLNAYGKQREFEKADTVYREMQE 604
Query: 1085 EGYVFSDEVHFQMLSLYGARRNFEMVEILFERLEMDPNINKKDLHLVVAGIYEGANRHND 1264
EG VF DEVHFQMLSLY ++++FEMVE LFERLE DPN+N K+LHLVVA +YE A+R ND
Sbjct: 605 EGCVFPDEVHFQMLSLYSSKKDFEMVESLFERLESDPNVNSKELHLVVAALYERADRLND 664
Query: 1265 ASRIVNQMSDKGI 1303
ASR++N+M ++GI
Sbjct: 665 ASRVMNRMRERGI 677
Score = 84.0 bits (206), Expect = 2e-13
Identities = 58/260 (22%), Positives = 122/260 (46%), Gaps = 1/260 (0%)
Frame = +2
Query: 2 LDYSKAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSY 181
L++ KA ++ ++ GI P+ + Y+++I+++GKA A +L ++R +GV D V Y
Sbjct: 419 LEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRRSGVEIDQVLY 478
Query: 182 STLLTMYVENQKFLEALSLFKEMKEIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRK 361
T++ Y A L +E+K+ D I + + +EA +F +
Sbjct: 479 QTMIVAYERVGLMGHAKRLLQELKQ----PDNIPRETAITILAKAGRIEEATWVFRQAFE 534
Query: 362 IGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYGKTLEHEK 541
G ++ + ++ +Y + + I +F M+ + ++ YGK E EK
Sbjct: 535 SGEVKDITVFGCMISLYSRNQRYVNVIEVFEKMRSAGYFPDSNAIAIVLNAYGKQREFEK 594
Query: 542 ANNLIQEMHSRG-IEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTML 718
A+ + +EM G + P+ + + ++S++ + LF++L S + L+ +
Sbjct: 595 ADTVYREMQEEGCVFPDEVHFQ-MLSLYSSKKDFEMVESLFERLESDPNVNSKELHLVVA 653
Query: 719 VAYERAGLVAHAKRLLHELK 778
YERA + A R+++ ++
Sbjct: 654 ALYERADRLNDASRVMNRMR 673
>ref|XP_002870737.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297316573|gb|EFH46996.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 680
Score = 688 bits (1776), Expect = 0.0
Identities = 342/433 (78%), Positives = 386/433 (89%)
Frame = +2
Query: 5 DYSKAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSYS 184
DYSKAISIFSRLKRSGITPDLVAYNSMINV+GKAKLF+EAR LI EM AGV P+TVSYS
Sbjct: 242 DYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFKEARVLIKEMNEAGVSPNTVSYS 301
Query: 185 TLLTMYVENQKFLEALSLFKEMKEIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRKI 364
TLL++YVEN KFLEALS+F EMKE+ C LDLTTCNIMIDVYGQLDM KEAD+LFW +RK+
Sbjct: 302 TLLSVYVENHKFLEALSVFAEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSLRKM 361
Query: 365 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYGKTLEHEKA 544
IEPNVVSYNT+LRVYG+AELFGEAIHLFRLMQRKDIEQNVVTYNTMI IYGKT+EHEKA
Sbjct: 362 DIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKA 421
Query: 545 NNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTMLVA 724
NL+QEM SRGIEPNAITYSTIISIWGK GKLDRAA LFQKLRSSG+EIDQVLYQTM+VA
Sbjct: 422 TNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVA 481
Query: 725 YERAGLVAHAKRLLHELKRPDNIPRETAICILAGAGRIEEATWVFRQAVDAGEVKDIAVF 904
YER GL+ HAKRLLHELK PDNIPRETAI ILA AG EEATWVFRQA ++GEVKDI+VF
Sbjct: 482 YERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGSTEEATWVFRQAFESGEVKDISVF 541
Query: 905 EQMIDLFSKYRKYTNVVEVFEKMRGIGYFPNSNVIALVLNAYGKLHEFGKADGVYIELQD 1084
MI+L+S+ ++Y NV+EVFEKMR GYFP+SN IA+VLNAYGK EF KAD VY E+Q+
Sbjct: 542 GCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNAIAMVLNAYGKQREFEKADTVYREMQE 601
Query: 1085 EGYVFSDEVHFQMLSLYGARRNFEMVEILFERLEMDPNINKKDLHLVVAGIYEGANRHND 1264
EG VF DEVHFQMLSLY ++++FEMVE LFERLE DPN+N K+LHLVVA +YE A++ ND
Sbjct: 602 EGCVFPDEVHFQMLSLYSSKKDFEMVESLFERLESDPNVNSKELHLVVAALYERADKLND 661
Query: 1265 ASRIVNQMSDKGI 1303
ASR++N+M ++GI
Sbjct: 662 ASRVMNRMRERGI 674
Score = 84.0 bits (206), Expect = 2e-13
Identities = 58/260 (22%), Positives = 122/260 (46%), Gaps = 1/260 (0%)
Frame = +2
Query: 2 LDYSKAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSY 181
+++ KA ++ ++ GI P+ + Y+++I+++GKA A +L ++R++GV D V Y
Sbjct: 416 MEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLY 475
Query: 182 STLLTMYVENQKFLEALSLFKEMKEIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRK 361
T++ Y A L E+K L D I + + +EA +F +
Sbjct: 476 QTMIVAYERVGLMGHAKRLLHELK----LPDNIPRETAITILAKAGSTEEATWVFRQAFE 531
Query: 362 IGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYGKTLEHEK 541
G ++ + ++ +Y + + I +F M+ + ++ YGK E EK
Sbjct: 532 SGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNAIAMVLNAYGKQREFEK 591
Query: 542 ANNLIQEMHSRG-IEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTML 718
A+ + +EM G + P+ + + ++S++ + LF++L S + L+ +
Sbjct: 592 ADTVYREMQEEGCVFPDEVHFQ-MLSLYSSKKDFEMVESLFERLESDPNVNSKELHLVVA 650
Query: 719 VAYERAGLVAHAKRLLHELK 778
YERA + A R+++ ++
Sbjct: 651 ALYERADKLNDASRVMNRMR 670
>ref|XP_006482520.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Citrus sinensis]
Length = 677
Score = 687 bits (1773), Expect = 0.0
Identities = 343/431 (79%), Positives = 387/431 (89%)
Frame = +2
Query: 5 DYSKAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSYS 184
DYSKAISIFSRLK SGI PDLVAYN+MINVFGKAKLF+EAR LI EMR GV PDTVSYS
Sbjct: 239 DYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYS 298
Query: 185 TLLTMYVENQKFLEALSLFKEMKEIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRKI 364
TLL +YVEN KF+EALS+F EM E+ C LDLTTCNIMIDVYGQLDMAK+AD+LFW MRK+
Sbjct: 299 TLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKM 358
Query: 365 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYGKTLEHEKA 544
GI+P+VVSYNTLLRVYG+AELFGEAIHLFRLMQRK+IEQNVVTYNTMI IYGK+LEHEKA
Sbjct: 359 GIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 418
Query: 545 NNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTMLVA 724
NL+QEM +RGIEPNAITYSTII+IWGK GKLDRAAMLFQKLRSSG+EID VLYQTM+VA
Sbjct: 419 TNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLYQTMIVA 478
Query: 725 YERAGLVAHAKRLLHELKRPDNIPRETAICILAGAGRIEEATWVFRQAVDAGEVKDIAVF 904
YER GLVAHAKRLLHEL++P+ IPRETAI ILA AGRIEEATWVFRQA DAGEVKDI+VF
Sbjct: 479 YERVGLVAHAKRLLHELRQPNTIPRETAITILARAGRIEEATWVFRQAFDAGEVKDISVF 538
Query: 905 EQMIDLFSKYRKYTNVVEVFEKMRGIGYFPNSNVIALVLNAYGKLHEFGKADGVYIELQD 1084
MI+LFS+ +KY NV+EVFEKMR GYFP+S++IALVLN+YGKL EF AD +Y E+Q+
Sbjct: 539 GCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFETADDLYSEMQE 598
Query: 1085 EGYVFSDEVHFQMLSLYGARRNFEMVEILFERLEMDPNINKKDLHLVVAGIYEGANRHND 1264
EG VFSD+VHFQMLSLYGAR++F M+E LFERL+ D NINKK+LH VVAGIYE ANR ND
Sbjct: 599 EGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAGIYERANRLND 658
Query: 1265 ASRIVNQMSDK 1297
ASRI+N+M+ +
Sbjct: 659 ASRIMNRMNKR 669
Score = 122 bits (306), Expect = 4e-25
Identities = 92/437 (21%), Positives = 190/437 (43%), Gaps = 5/437 (1%)
Frame = +2
Query: 5 DYSKAISIFSRLKRSG-ITPDLVAYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSY 181
+Y ++++I + +P + AYN ++ +AK + A L EMR G+ PD +Y
Sbjct: 133 NYQRSVAILDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTY 192
Query: 182 STLLTMYVENQKFLEALSLFKEMKEIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRK 361
STL+T + + F A+S ++M++ + DL
Sbjct: 193 STLITCFGKEGMFDSAISWLQQMEQDRVSGDL---------------------------- 224
Query: 362 IGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYGKTLEHEK 541
V Y+ L+ + + +AI +F ++ I ++V YNTMI ++GK ++
Sbjct: 225 -------VLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLVAYNTMINVFGKAKLFKE 277
Query: 542 ANNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTMLV 721
A LI+EM +G++P+ ++YST+++++ + K A +F ++ +D M+
Sbjct: 278 ARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEMNEVNCPLDLTTCNIMID 337
Query: 722 AYERAGLVAHAKRLLHELKR----PDNIPRETAICILAGAGRIEEATWVFRQAVDAGEVK 889
Y + + A RL +++ P + T + + A EA +FR +
Sbjct: 338 VYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELFGEAIHLFRLMQRKEIEQ 397
Query: 890 DIAVFEQMIDLFSKYRKYTNVVEVFEKMRGIGYFPNSNVIALVLNAYGKLHEFGKADGVY 1069
++ + MI ++ K ++ + ++M+ G PN+ + ++ +GK + +A ++
Sbjct: 398 NVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLF 457
Query: 1070 IELQDEGYVFSDEVHFQMLSLYGARRNFEMVEILFERLEMDPNINKKDLHLVVAGIYEGA 1249
+L+ G ++ M+ Y + L L I ++ ++A A
Sbjct: 458 QKLRSSGVEIDPVLYQTMIVAYERVGLVAHAKRLLHELRQPNTIPRETAITILA----RA 513
Query: 1250 NRHNDASRIVNQMSDKG 1300
R +A+ + Q D G
Sbjct: 514 GRIEEATWVFRQAFDAG 530
Score = 104 bits (260), Expect = 9e-20
Identities = 78/328 (23%), Positives = 153/328 (46%), Gaps = 7/328 (2%)
Frame = +2
Query: 341 LFWGMRKIGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYG 520
L W + P+V +YN +LR A+ + A LF M+++ I + TY+T+I +G
Sbjct: 141 LDWINEEARYSPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRGIAPDRYTYSTLITCFG 200
Query: 521 KTLEHEKANNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQV 700
K + A + +Q+M + + + YS +I + K+ +A +F +L+SSGI D V
Sbjct: 201 KEGMFDSAISWLQQMEQDRVSGDLVLYSNLIELARKLSDYSKAISIFSRLKSSGIVPDLV 260
Query: 701 LYQTMLVAYERAGLVAHAKRLLHELK----RPDNIPRETAICILAGAGRIEEATWVFRQA 868
Y TM+ + +A L A+ L+ E++ +PD + T + + + EA VF +
Sbjct: 261 AYNTMINVFGKAKLFKEARLLIEEMREQGVKPDTVSYSTLLNLYVENHKFVEALSVFAEM 320
Query: 869 VDAGEVKDIAVFEQMIDLFSKYRKYTNVVEVFEKMRGIGYFPNSNVIALVLNAYGKLHEF 1048
+ D+ MID++ + + +F MR +G P+ +L YG+ F
Sbjct: 321 NEVNCPLDLTTCNIMIDVYGQLDMAKDADRLFWSMRKMGIDPSVVSYNTLLRVYGEAELF 380
Query: 1049 GKADGVYIELQDEGYVFSDEVHFQMLSLYGARRNFEMVEILFERLE---MDPNINKKDLH 1219
G+A ++ +Q + + + M+ +YG E L + ++ ++PN +
Sbjct: 381 GEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLMQEMQNRGIEPN---AITY 437
Query: 1220 LVVAGIYEGANRHNDASRIVNQMSDKGI 1303
+ I+ A + + A+ + ++ G+
Sbjct: 438 STIIAIWGKAGKLDRAAMLFQKLRSSGV 465
Score = 80.5 bits (197), Expect = 2e-12
Identities = 56/260 (21%), Positives = 117/260 (45%)
Frame = +2
Query: 2 LDYSKAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSY 181
L++ KA ++ ++ GI P+ + Y+++I ++GKA A L ++R++GV D V Y
Sbjct: 413 LEHEKATNLMQEMQNRGIEPNAITYSTIIAIWGKAGKLDRAAMLFQKLRSSGVEIDPVLY 472
Query: 182 STLLTMYVENQKFLEALSLFKEMKEIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRK 361
T++ Y A L E+++ + T I + + +EA +F
Sbjct: 473 QTMIVAYERVGLVAHAKRLLHELRQPNTIPRETA----ITILARAGRIEEATWVFRQAFD 528
Query: 362 IGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYGKTLEHEK 541
G ++ + ++ ++ + + I +F M+ + ++ YGK E E
Sbjct: 529 AGEVKDISVFGCMIELFSRNKKYANVIEVFEKMRSAGYFPDSHIIALVLNSYGKLREFET 588
Query: 542 ANNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTMLV 721
A++L EM G + + ++S++G + LF++L S + L+ +
Sbjct: 589 ADDLYSEMQEEGCVFSDQVHFQMLSLYGARKDFNMLESLFERLDSDSNINKKELHHVVAG 648
Query: 722 AYERAGLVAHAKRLLHELKR 781
YERA + A R+++ + +
Sbjct: 649 IYERANRLNDASRIMNRMNK 668
>ref|XP_003538522.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Glycine max]
Length = 667
Score = 684 bits (1764), Expect = 0.0
Identities = 344/431 (79%), Positives = 384/431 (89%)
Frame = +2
Query: 5 DYSKAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSYS 184
DYSKAISIFSRLK S ITPDL+AYNSMINVFGKAKLFREAR L+ EMR V PDTVSYS
Sbjct: 229 DYSKAISIFSRLKASTITPDLIAYNSMINVFGKAKLFREARLLLQEMRDNAVQPDTVSYS 288
Query: 185 TLLTMYVENQKFLEALSLFKEMKEIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRKI 364
TLL +YV+NQKF+EALSLF EM E KC LDLTTCNIMIDVYGQL M KEAD+LFW MRK+
Sbjct: 289 TLLAIYVDNQKFVEALSLFSEMNEAKCPLDLTTCNIMIDVYGQLHMPKEADRLFWSMRKM 348
Query: 365 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYGKTLEHEKA 544
GI+PNV+SYNTLLRVYG+A+LFGEAIHLFRLMQ KD++QNVVTYNTMI IYGKTLEHEKA
Sbjct: 349 GIQPNVISYNTLLRVYGEADLFGEAIHLFRLMQSKDVQQNVVTYNTMINIYGKTLEHEKA 408
Query: 545 NNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTMLVA 724
NLIQEM+ RGIEPNAITYSTIISIW K GKLDRAA+LFQKLRSSG+ ID+VLYQTM+VA
Sbjct: 409 TNLIQEMNKRGIEPNAITYSTIISIWEKAGKLDRAAILFQKLRSSGVRIDEVLYQTMIVA 468
Query: 725 YERAGLVAHAKRLLHELKRPDNIPRETAICILAGAGRIEEATWVFRQAVDAGEVKDIAVF 904
YER GLVAHAKRLLHELKRPDNIPR+TAI ILA AGRIEEATWVFRQA DA EVKDI+VF
Sbjct: 469 YERTGLVAHAKRLLHELKRPDNIPRDTAIAILARAGRIEEATWVFRQAFDAREVKDISVF 528
Query: 905 EQMIDLFSKYRKYTNVVEVFEKMRGIGYFPNSNVIALVLNAYGKLHEFGKADGVYIELQD 1084
MI+LFSK +KY NVVEVFEKMR +GYFP+S+VIALVLNA+GKL EF KAD +Y ++ +
Sbjct: 529 GCMINLFSKNKKYANVVEVFEKMREVGYFPDSDVIALVLNAFGKLREFDKADALYRQMHE 588
Query: 1085 EGYVFSDEVHFQMLSLYGARRNFEMVEILFERLEMDPNINKKDLHLVVAGIYEGANRHND 1264
EG VF DEVHFQMLSLYGAR++F MVE LFE+L+ +PNINKK+LHLVVA IYE A+R ND
Sbjct: 589 EGCVFPDEVHFQMLSLYGARKDFVMVESLFEKLDSNPNINKKELHLVVASIYERADRLND 648
Query: 1265 ASRIVNQMSDK 1297
ASRI+N+M+ K
Sbjct: 649 ASRIMNRMNKK 659
Score = 103 bits (257), Expect = 2e-19
Identities = 78/328 (23%), Positives = 152/328 (46%), Gaps = 7/328 (2%)
Frame = +2
Query: 341 LFWGMRKIGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYG 520
L W K P++ +YN LLR A+ + A LF M++K + + TY+T+I +G
Sbjct: 131 LDWINDKALYRPSLFAYNVLLRNVLRAKQWHLAHGLFDEMRQKGLSPDRYTYSTLITCFG 190
Query: 521 KTLEHEKANNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQV 700
K + + +Q+M + + + YS +I + K+ +A +F +L++S I D +
Sbjct: 191 KHGLFDSSLFWLQQMEQDNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLKASTITPDLI 250
Query: 701 LYQTMLVAYERAGLVAHAKRLLHELK----RPDNIPRETAICILAGAGRIEEATWVFRQA 868
Y +M+ + +A L A+ LL E++ +PD + T + I + EA +F +
Sbjct: 251 AYNSMINVFGKAKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEALSLFSEM 310
Query: 869 VDAGEVKDIAVFEQMIDLFSKYRKYTNVVEVFEKMRGIGYFPNSNVIALVLNAYGKLHEF 1048
+A D+ MID++ + +F MR +G PN +L YG+ F
Sbjct: 311 NEAKCPLDLTTCNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVISYNTLLRVYGEADLF 370
Query: 1049 GKADGVYIELQDEGYVFSDEVHFQMLSLYGARRNFEMVEILFERLE---MDPNINKKDLH 1219
G+A ++ +Q + + + M+++YG E L + + ++PN +
Sbjct: 371 GEAIHLFRLMQSKDVQQNVVTYNTMINIYGKTLEHEKATNLIQEMNKRGIEPN---AITY 427
Query: 1220 LVVAGIYEGANRHNDASRIVNQMSDKGI 1303
+ I+E A + + A+ + ++ G+
Sbjct: 428 STIISIWEKAGKLDRAAILFQKLRSSGV 455
Score = 78.6 bits (192), Expect = 7e-12
Identities = 56/264 (21%), Positives = 125/264 (47%), Gaps = 1/264 (0%)
Frame = +2
Query: 2 LDYSKAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSY 181
L++ KA ++ + + GI P+ + Y+++I+++ KA A L ++R++GV D V Y
Sbjct: 403 LEHEKATNLIQEMNKRGIEPNAITYSTIISIWEKAGKLDRAAILFQKLRSSGVRIDEVLY 462
Query: 182 STLLTMYVENQKFLEALSLFKEMKEIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRK 361
T++ Y A L E+K + T I+ G+++ A + + R+
Sbjct: 463 QTMIVAYERTGLVAHAKRLLHELKRPDNIPRDTAIAILARA-GRIEEATWVFRQAFDARE 521
Query: 362 IGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYGKTLEHEK 541
+ ++ + ++ ++ + + + +F M+ + ++ +GK E +K
Sbjct: 522 V---KDISVFGCMINLFSKNKKYANVVEVFEKMREVGYFPDSDVIALVLNAFGKLREFDK 578
Query: 542 ANNLIQEMHSRG-IEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTML 718
A+ L ++MH G + P+ + + ++S++G LF+KL S+ + L+ +
Sbjct: 579 ADALYRQMHEEGCVFPDEVHFQ-MLSLYGARKDFVMVESLFEKLDSNPNINKKELHLVVA 637
Query: 719 VAYERAGLVAHAKRLLHELKRPDN 790
YERA + A R+++ + + N
Sbjct: 638 SIYERADRLNDASRIMNRMNKKAN 661
>gb|ESW35832.1| hypothetical protein PHAVU_001G268500g [Phaseolus vulgaris]
Length = 677
Score = 682 bits (1760), Expect = 0.0
Identities = 343/435 (78%), Positives = 384/435 (88%)
Frame = +2
Query: 5 DYSKAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSYS 184
DYSKAISIF+RLK S ITPDL+AYNSMINVFGKAKLFREAR L+ EM V PDTVSYS
Sbjct: 239 DYSKAISIFNRLKASAITPDLIAYNSMINVFGKAKLFREARLLLQEMADNAVQPDTVSYS 298
Query: 185 TLLTMYVENQKFLEALSLFKEMKEIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRKI 364
TLL +YV+NQKF+EALSLF +M E KC LDLTTCNIMIDVYGQL M KEAD+LFW MRK+
Sbjct: 299 TLLAIYVDNQKFVEALSLFSQMNEAKCPLDLTTCNIMIDVYGQLHMPKEADRLFWSMRKM 358
Query: 365 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYGKTLEHEKA 544
I+PNVVSYNTLLRVYGDAELFGEAIHLFRLMQ KD+ QNVVTYNTMI IYGKTLEHEKA
Sbjct: 359 EIQPNVVSYNTLLRVYGDAELFGEAIHLFRLMQSKDVPQNVVTYNTMINIYGKTLEHEKA 418
Query: 545 NNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTMLVA 724
NL+QEM R IEPNAITYSTIISIW K GKLDRAA+LFQKLRSSG+ ID+VLYQTM+VA
Sbjct: 419 TNLVQEMKKRDIEPNAITYSTIISIWEKAGKLDRAAILFQKLRSSGVRIDEVLYQTMIVA 478
Query: 725 YERAGLVAHAKRLLHELKRPDNIPRETAICILAGAGRIEEATWVFRQAVDAGEVKDIAVF 904
YERAGLVAHAKRLLHELKRPDNIPRETAI ILA AGRIEEATWVFRQA DAGEVKDI+VF
Sbjct: 479 YERAGLVAHAKRLLHELKRPDNIPRETAIVILARAGRIEEATWVFRQAFDAGEVKDISVF 538
Query: 905 EQMIDLFSKYRKYTNVVEVFEKMRGIGYFPNSNVIALVLNAYGKLHEFGKADGVYIELQD 1084
MI+LFSK +KY+NVVEVFEKMR +GYFP+S+VIALVLNA+GKL EF KADG+Y ++ +
Sbjct: 539 GCMINLFSKNKKYSNVVEVFEKMRQVGYFPDSDVIALVLNAFGKLREFDKADGLYRQMHE 598
Query: 1085 EGYVFSDEVHFQMLSLYGARRNFEMVEILFERLEMDPNINKKDLHLVVAGIYEGANRHND 1264
EG VF DEVHFQMLSLYGAR++F MVE LFE+L+ +PN+NKK+LHLVVA IYE A+R ND
Sbjct: 599 EGCVFPDEVHFQMLSLYGARKDFMMVESLFEKLDSNPNVNKKELHLVVASIYERADRLND 658
Query: 1265 ASRIVNQMSDKGIHT 1309
ASR++N+ + K I +
Sbjct: 659 ASRVMNKTNQKAIRS 673
Score = 97.4 bits (241), Expect = 1e-17
Identities = 77/336 (22%), Positives = 150/336 (44%), Gaps = 7/336 (2%)
Frame = +2
Query: 317 DMAKEADKLFWGMRKIGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTY 496
D + L W K P++ +YN +LR A+ + A LF M+ K + + TY
Sbjct: 133 DWQRTVALLDWINEKALYSPSLFAYNVVLRNVLRAKQWHLAHGLFDEMRHKGLSPDRYTY 192
Query: 497 NTMIMIYGKTLEHEKANNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRS 676
+T+I + K + + +Q+M + + + YS +I + K+ +A +F +L++
Sbjct: 193 STLITSFAKDGLFDSSLFWLQQMEQDNVSGDLVLYSNLIDLARKLCDYSKAISIFNRLKA 252
Query: 677 SGIEIDQVLYQTMLVAYERAGLVAHAKRLLHELK----RPDNIPRETAICILAGAGRIEE 844
S I D + Y +M+ + +A L A+ LL E+ +PD + T + I + E
Sbjct: 253 SAITPDLIAYNSMINVFGKAKLFREARLLLQEMADNAVQPDTVSYSTLLAIYVDNQKFVE 312
Query: 845 ATWVFRQAVDAGEVKDIAVFEQMIDLFSKYRKYTNVVEVFEKMRGIGYFPNSNVIALVLN 1024
A +F Q +A D+ MID++ + +F MR + PN +L
Sbjct: 313 ALSLFSQMNEAKCPLDLTTCNIMIDVYGQLHMPKEADRLFWSMRKMEIQPNVVSYNTLLR 372
Query: 1025 AYGKLHEFGKADGVYIELQDEGYVFSDEVHFQMLSLYGARRNFEMVEILFERL---EMDP 1195
YG FG+A ++ +Q + + + M+++YG E L + + +++P
Sbjct: 373 VYGDAELFGEAIHLFRLMQSKDVPQNVVTYNTMINIYGKTLEHEKATNLVQEMKKRDIEP 432
Query: 1196 NINKKDLHLVVAGIYEGANRHNDASRIVNQMSDKGI 1303
N + + I+E A + + A+ + ++ G+
Sbjct: 433 N---AITYSTIISIWEKAGKLDRAAILFQKLRSSGV 465
Score = 77.0 bits (188), Expect = 2e-11
Identities = 56/258 (21%), Positives = 120/258 (46%), Gaps = 1/258 (0%)
Frame = +2
Query: 2 LDYSKAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSY 181
L++ KA ++ +K+ I P+ + Y+++I+++ KA A L ++R++GV D V Y
Sbjct: 413 LEHEKATNLVQEMKKRDIEPNAITYSTIISIWEKAGKLDRAAILFQKLRSSGVRIDEVLY 472
Query: 182 STLLTMYVENQKFLEALSLFKEMKEIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRK 361
T++ Y A L E+K D I + + +EA +F
Sbjct: 473 QTMIVAYERAGLVAHAKRLLHELKR----PDNIPRETAIVILARAGRIEEATWVFRQAFD 528
Query: 362 IGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYGKTLEHEK 541
G ++ + ++ ++ + + + +F M++ + ++ +GK E +K
Sbjct: 529 AGEVKDISVFGCMINLFSKNKKYSNVVEVFEKMRQVGYFPDSDVIALVLNAFGKLREFDK 588
Query: 542 ANNLIQEMHSRG-IEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTML 718
A+ L ++MH G + P+ + + ++S++G LF+KL S+ + L+ +
Sbjct: 589 ADGLYRQMHEEGCVFPDEVHFQ-MLSLYGARKDFMMVESLFEKLDSNPNVNKKELHLVVA 647
Query: 719 VAYERAGLVAHAKRLLHE 772
YERA + A R++++
Sbjct: 648 SIYERADRLNDASRVMNK 665
>ref|XP_003552765.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Glycine max]
Length = 658
Score = 680 bits (1755), Expect = 0.0
Identities = 345/431 (80%), Positives = 384/431 (89%)
Frame = +2
Query: 5 DYSKAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSYS 184
DYSKAISIFSRLK S I+PDL+AYNSMINVFGKAKLFREAR L+ EMR V PDTVSYS
Sbjct: 220 DYSKAISIFSRLKASTISPDLIAYNSMINVFGKAKLFREARLLLQEMRDNAVQPDTVSYS 279
Query: 185 TLLTMYVENQKFLEALSLFKEMKEIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRKI 364
TLL +YV+NQKF+EALSLF EM E KC LDLTTCNIMIDVYGQL M KEAD+LFW MRK+
Sbjct: 280 TLLAIYVDNQKFVEALSLFFEMNEAKCPLDLTTCNIMIDVYGQLHMPKEADRLFWSMRKM 339
Query: 365 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYGKTLEHEKA 544
GI+PNVVSYNTLLRVYG+A+LFGEAIHLFRLMQ KD++QNVVTYNTMI IYGKTLEHEKA
Sbjct: 340 GIQPNVVSYNTLLRVYGEADLFGEAIHLFRLMQSKDVQQNVVTYNTMINIYGKTLEHEKA 399
Query: 545 NNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTMLVA 724
NLIQEM RGIEPNAITYSTIISIW K GKLDRAA+LFQKLRSSG+ ID+VLYQTM+VA
Sbjct: 400 TNLIQEMKKRGIEPNAITYSTIISIWEKAGKLDRAAILFQKLRSSGVRIDEVLYQTMIVA 459
Query: 725 YERAGLVAHAKRLLHELKRPDNIPRETAICILAGAGRIEEATWVFRQAVDAGEVKDIAVF 904
YERAGLVAHAKRLLHELKRPDNIPR+TAI ILA AGRIEEATWVFRQA DA EVKDI+VF
Sbjct: 460 YERAGLVAHAKRLLHELKRPDNIPRDTAIGILARAGRIEEATWVFRQAFDAREVKDISVF 519
Query: 905 EQMIDLFSKYRKYTNVVEVFEKMRGIGYFPNSNVIALVLNAYGKLHEFGKADGVYIELQD 1084
MI+LFSK +KY NVVEVFEKMR +GYFP+S+VIALVLNA+GKL EF KAD +Y ++ +
Sbjct: 520 GCMINLFSKNKKYGNVVEVFEKMRVVGYFPDSDVIALVLNAFGKLREFDKADALYRQMHE 579
Query: 1085 EGYVFSDEVHFQMLSLYGARRNFEMVEILFERLEMDPNINKKDLHLVVAGIYEGANRHND 1264
EG VF DEVHFQMLSLYGAR++F MVE LFE+L+ +PNINKK+LHLVVA IYE A+R ND
Sbjct: 580 EGCVFPDEVHFQMLSLYGARKDFVMVESLFEKLDSNPNINKKELHLVVASIYERADRLND 639
Query: 1265 ASRIVNQMSDK 1297
ASRI+N+M+ K
Sbjct: 640 ASRIMNRMNQK 650
Score = 103 bits (256), Expect = 2e-19
Identities = 78/328 (23%), Positives = 153/328 (46%), Gaps = 7/328 (2%)
Frame = +2
Query: 341 LFWGMRKIGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYG 520
L W K P++ +YN LLR A+ + A LF M++K + + TY+T+I +G
Sbjct: 122 LDWINDKALYSPSLFAYNVLLRNVLRAKQWHLAHGLFDEMRQKGLSPDRYTYSTLITSFG 181
Query: 521 KTLEHEKANNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQV 700
K + + +Q+M + + + YS +I + K+ +A +F +L++S I D +
Sbjct: 182 KHGLFDSSLFWLQQMEQDNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLKASTISPDLI 241
Query: 701 LYQTMLVAYERAGLVAHAKRLLHELK----RPDNIPRETAICILAGAGRIEEATWVFRQA 868
Y +M+ + +A L A+ LL E++ +PD + T + I + EA +F +
Sbjct: 242 AYNSMINVFGKAKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEALSLFFEM 301
Query: 869 VDAGEVKDIAVFEQMIDLFSKYRKYTNVVEVFEKMRGIGYFPNSNVIALVLNAYGKLHEF 1048
+A D+ MID++ + +F MR +G PN +L YG+ F
Sbjct: 302 NEAKCPLDLTTCNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVVSYNTLLRVYGEADLF 361
Query: 1049 GKADGVYIELQDEGYVFSDEVHFQMLSLYGARRNFEMVEILFERLE---MDPNINKKDLH 1219
G+A ++ +Q + + + M+++YG E L + ++ ++PN +
Sbjct: 362 GEAIHLFRLMQSKDVQQNVVTYNTMINIYGKTLEHEKATNLIQEMKKRGIEPN---AITY 418
Query: 1220 LVVAGIYEGANRHNDASRIVNQMSDKGI 1303
+ I+E A + + A+ + ++ G+
Sbjct: 419 STIISIWEKAGKLDRAAILFQKLRSSGV 446
Score = 81.3 bits (199), Expect = 1e-12
Identities = 58/264 (21%), Positives = 127/264 (48%), Gaps = 1/264 (0%)
Frame = +2
Query: 2 LDYSKAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSY 181
L++ KA ++ +K+ GI P+ + Y+++I+++ KA A L ++R++GV D V Y
Sbjct: 394 LEHEKATNLIQEMKKRGIEPNAITYSTIISIWEKAGKLDRAAILFQKLRSSGVRIDEVLY 453
Query: 182 STLLTMYVENQKFLEALSLFKEMKEIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRK 361
T++ Y A L E+K + T I+ G+++ A + + R+
Sbjct: 454 QTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIGILARA-GRIEEATWVFRQAFDARE 512
Query: 362 IGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMIMIYGKTLEHEK 541
+ ++ + ++ ++ + +G + +F M+ + ++ +GK E +K
Sbjct: 513 V---KDISVFGCMINLFSKNKKYGNVVEVFEKMRVVGYFPDSDVIALVLNAFGKLREFDK 569
Query: 542 ANNLIQEMHSRG-IEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTML 718
A+ L ++MH G + P+ + + ++S++G LF+KL S+ + L+ +
Sbjct: 570 ADALYRQMHEEGCVFPDEVHFQ-MLSLYGARKDFVMVESLFEKLDSNPNINKKELHLVVA 628
Query: 719 VAYERAGLVAHAKRLLHELKRPDN 790
YERA + A R+++ + + N
Sbjct: 629 SIYERADRLNDASRIMNRMNQKAN 652