BLASTX nr result
ID: Rehmannia23_contig00021495
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00021495
(456 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004238472.1| PREDICTED: chlorophyll a-b binding protein o... 183 2e-44
ref|XP_006342200.1| PREDICTED: chlorophyll a-b binding protein o... 182 4e-44
ref|XP_002276647.1| PREDICTED: chlorophyll a-b binding protein o... 182 5e-44
ref|XP_006490397.1| PREDICTED: chlorophyll a-b binding protein 1... 181 1e-43
ref|XP_006490395.1| PREDICTED: chlorophyll a-b binding protein 1... 181 1e-43
gb|EOY09296.1| Light-harvesting complex II protein Lhcb7 [Theobr... 180 2e-43
ref|XP_006490396.1| PREDICTED: chlorophyll a-b binding protein 1... 179 3e-43
ref|NP_001240088.1| uncharacterized protein LOC100786260 [Glycin... 179 3e-43
ref|XP_004145567.1| PREDICTED: chlorophyll a-b binding protein o... 179 4e-43
ref|XP_004499329.1| PREDICTED: chlorophyll a-b binding protein t... 178 6e-43
ref|XP_004499328.1| PREDICTED: chlorophyll a-b binding protein t... 178 6e-43
gb|EXB56249.1| Chlorophyll a-b binding protein of LHCII type III... 177 1e-42
gb|EMJ10548.1| hypothetical protein PRUPE_ppa008546mg [Prunus pe... 177 1e-42
ref|XP_004169873.1| PREDICTED: chlorophyll a-b binding protein o... 176 2e-42
gb|ESW32583.1| hypothetical protein PHAVU_001G000400g [Phaseolus... 176 3e-42
ref|XP_002307004.1| chlorophyll A-B binding family protein [Popu... 174 1e-41
ref|XP_006390178.1| hypothetical protein EUTSA_v10018862mg [Eutr... 173 2e-41
ref|XP_006390176.1| hypothetical protein EUTSA_v10018862mg [Eutr... 173 2e-41
ref|XP_002887646.1| chlorophyll A-B binding family protein [Arab... 171 7e-41
ref|XP_006302513.1| hypothetical protein CARUB_v10020611mg, part... 171 1e-40
>ref|XP_004238472.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
chloroplastic-like [Solanum lycopersicum]
Length = 318
Score = 183 bits (464), Expect = 2e-44
Identities = 86/94 (91%), Positives = 90/94 (95%)
Frame = -3
Query: 454 RYCGIEALEPLGIYLPGDINYPGGALFDPLNLSRDPSAFEELKVKEIKNGRLAMVAWLGF 275
RYCGIEALEPLGIYLPGDINYPGG LFDPLNLS+DP AFEELKVKEIKNGRLAMVAWLGF
Sbjct: 225 RYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDPMAFEELKVKEIKNGRLAMVAWLGF 284
Query: 274 YTQAALTGKGPVQNLLDHIADPFHNNLLSTIKSL 173
Y QAALTGKGPVQNLL+HI+DPFHNNLLS +KSL
Sbjct: 285 YVQAALTGKGPVQNLLEHISDPFHNNLLSILKSL 318
>ref|XP_006342200.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
chloroplastic-like [Solanum tuberosum]
Length = 318
Score = 182 bits (462), Expect = 4e-44
Identities = 85/94 (90%), Positives = 90/94 (95%)
Frame = -3
Query: 454 RYCGIEALEPLGIYLPGDINYPGGALFDPLNLSRDPSAFEELKVKEIKNGRLAMVAWLGF 275
RYCGIEALEPLG+YLPGDINYPGG LFDPLNLS+DP AFEELKVKEIKNGRLAMVAWLGF
Sbjct: 225 RYCGIEALEPLGLYLPGDINYPGGVLFDPLNLSKDPMAFEELKVKEIKNGRLAMVAWLGF 284
Query: 274 YTQAALTGKGPVQNLLDHIADPFHNNLLSTIKSL 173
Y QAALTGKGPVQNLL+HI+DPFHNNLLS +KSL
Sbjct: 285 YVQAALTGKGPVQNLLEHISDPFHNNLLSILKSL 318
>ref|XP_002276647.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
chloroplastic [Vitis vinifera]
gi|297745621|emb|CBI40786.3| unnamed protein product
[Vitis vinifera]
Length = 331
Score = 182 bits (461), Expect = 5e-44
Identities = 86/94 (91%), Positives = 89/94 (94%)
Frame = -3
Query: 454 RYCGIEALEPLGIYLPGDINYPGGALFDPLNLSRDPSAFEELKVKEIKNGRLAMVAWLGF 275
RYCGIEALEPLGIYLPGDINYPGGALFDPLNLS+DP AFEELKVKEIKNGRLAMVAWLGF
Sbjct: 238 RYCGIEALEPLGIYLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMVAWLGF 297
Query: 274 YTQAALTGKGPVQNLLDHIADPFHNNLLSTIKSL 173
Y QAA TGKGPVQNLLDH+ADPFHNNLLS K+L
Sbjct: 298 YIQAAATGKGPVQNLLDHLADPFHNNLLSIFKAL 331
>ref|XP_006490397.1| PREDICTED: chlorophyll a-b binding protein 1B, chloroplastic-like
isoform X3 [Citrus sinensis]
Length = 300
Score = 181 bits (458), Expect = 1e-43
Identities = 92/124 (74%), Positives = 99/124 (79%)
Frame = -3
Query: 454 RYCGIEALEPLGIYLPGDINYPGGALFDPLNLSRDPSAFEELKVKEIKNGRLAMVAWLGF 275
RYCGIEALEPLGI+LPGDINYPGGALFDPLNLS+DP AFEELKVKEIKNGRLAMVAWLGF
Sbjct: 157 RYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMVAWLGF 216
Query: 274 YTQAALTGKGPVQNLLDHIADPFHNNLLSTIKSL*IQPSNSLPVTIYRCFVLTVIQFICM 95
Y QAA TGKGPVQNLLDHI+DP HNNLLS +KS+ PS + RC QF C
Sbjct: 217 YIQAAFTGKGPVQNLLDHISDPLHNNLLSMVKSM-DDPSGCPLERMRRC------QFRCN 269
Query: 94 TTHK 83
T +
Sbjct: 270 QTQR 273
>ref|XP_006490395.1| PREDICTED: chlorophyll a-b binding protein 1B, chloroplastic-like
isoform X1 [Citrus sinensis]
Length = 388
Score = 181 bits (458), Expect = 1e-43
Identities = 92/124 (74%), Positives = 99/124 (79%)
Frame = -3
Query: 454 RYCGIEALEPLGIYLPGDINYPGGALFDPLNLSRDPSAFEELKVKEIKNGRLAMVAWLGF 275
RYCGIEALEPLGI+LPGDINYPGGALFDPLNLS+DP AFEELKVKEIKNGRLAMVAWLGF
Sbjct: 245 RYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMVAWLGF 304
Query: 274 YTQAALTGKGPVQNLLDHIADPFHNNLLSTIKSL*IQPSNSLPVTIYRCFVLTVIQFICM 95
Y QAA TGKGPVQNLLDHI+DP HNNLLS +KS+ PS + RC QF C
Sbjct: 305 YIQAAFTGKGPVQNLLDHISDPLHNNLLSMVKSM-DDPSGCPLERMRRC------QFRCN 357
Query: 94 TTHK 83
T +
Sbjct: 358 QTQR 361
>gb|EOY09296.1| Light-harvesting complex II protein Lhcb7 [Theobroma cacao]
Length = 362
Score = 180 bits (456), Expect = 2e-43
Identities = 83/94 (88%), Positives = 90/94 (95%)
Frame = -3
Query: 454 RYCGIEALEPLGIYLPGDINYPGGALFDPLNLSRDPSAFEELKVKEIKNGRLAMVAWLGF 275
RYCGIEALEPLGIYLPGDINYPGG LFDPLNLS+DP AFEELKVKEIKNGRLAMVAWLGF
Sbjct: 269 RYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDPVAFEELKVKEIKNGRLAMVAWLGF 328
Query: 274 YTQAALTGKGPVQNLLDHIADPFHNNLLSTIKSL 173
Y+QAALTGKGPVQNLL+H++DPFHNNL S +KS+
Sbjct: 329 YSQAALTGKGPVQNLLEHLSDPFHNNLFSILKSM 362
>ref|XP_006490396.1| PREDICTED: chlorophyll a-b binding protein 1B, chloroplastic-like
isoform X2 [Citrus sinensis]
Length = 338
Score = 179 bits (455), Expect = 3e-43
Identities = 84/94 (89%), Positives = 89/94 (94%)
Frame = -3
Query: 454 RYCGIEALEPLGIYLPGDINYPGGALFDPLNLSRDPSAFEELKVKEIKNGRLAMVAWLGF 275
RYCGIEALEPLGI+LPGDINYPGGALFDPLNLS+DP AFEELKVKEIKNGRLAMVAWLGF
Sbjct: 245 RYCGIEALEPLGIFLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMVAWLGF 304
Query: 274 YTQAALTGKGPVQNLLDHIADPFHNNLLSTIKSL 173
Y QAA TGKGPVQNLLDHI+DP HNNLLS +KS+
Sbjct: 305 YIQAAFTGKGPVQNLLDHISDPLHNNLLSMVKSM 338
>ref|NP_001240088.1| uncharacterized protein LOC100786260 [Glycine max]
gi|255636882|gb|ACU18774.1| unknown [Glycine max]
Length = 331
Score = 179 bits (454), Expect = 3e-43
Identities = 83/91 (91%), Positives = 87/91 (95%)
Frame = -3
Query: 454 RYCGIEALEPLGIYLPGDINYPGGALFDPLNLSRDPSAFEELKVKEIKNGRLAMVAWLGF 275
RYCGIEALEPLGIYLPGDINYPGGALFDPLNLS DP AFEELKVKEIKNGRLAMVAWLGF
Sbjct: 234 RYCGIEALEPLGIYLPGDINYPGGALFDPLNLSNDPEAFEELKVKEIKNGRLAMVAWLGF 293
Query: 274 YTQAALTGKGPVQNLLDHIADPFHNNLLSTI 182
Y QAALTGKGPVQNL+DHI+DPFHNNLL ++
Sbjct: 294 YVQAALTGKGPVQNLIDHISDPFHNNLLGSL 324
>ref|XP_004145567.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
chloroplastic-like [Cucumis sativus]
Length = 338
Score = 179 bits (453), Expect = 4e-43
Identities = 84/93 (90%), Positives = 88/93 (94%)
Frame = -3
Query: 454 RYCGIEALEPLGIYLPGDINYPGGALFDPLNLSRDPSAFEELKVKEIKNGRLAMVAWLGF 275
RYCGIEALEPLGIYLPGDINYPGG LFDPLNLS+D +AFEELKVKEIKNGRLAMVAWLGF
Sbjct: 242 RYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGF 301
Query: 274 YTQAALTGKGPVQNLLDHIADPFHNNLLSTIKS 176
Y+QAALTGKGPVQNLLDHIADPFHNN LS + S
Sbjct: 302 YSQAALTGKGPVQNLLDHIADPFHNNFLSLLNS 334
>ref|XP_004499329.1| PREDICTED: chlorophyll a-b binding protein type 1 member F3,
chloroplastic-like isoform X2 [Cicer arietinum]
Length = 289
Score = 178 bits (452), Expect = 6e-43
Identities = 82/93 (88%), Positives = 89/93 (95%)
Frame = -3
Query: 454 RYCGIEALEPLGIYLPGDINYPGGALFDPLNLSRDPSAFEELKVKEIKNGRLAMVAWLGF 275
RYCGIEALEPLGIYLPGDINYPGGALFDPLNLS+DP AFEELKVKEIKNGRLAM+AWLGF
Sbjct: 193 RYCGIEALEPLGIYLPGDINYPGGALFDPLNLSKDPEAFEELKVKEIKNGRLAMMAWLGF 252
Query: 274 YTQAALTGKGPVQNLLDHIADPFHNNLLSTIKS 176
+ QAALTGKGPVQNL+DHI+DPFHNNLL ++ S
Sbjct: 253 FMQAALTGKGPVQNLMDHISDPFHNNLLGSLNS 285
>ref|XP_004499328.1| PREDICTED: chlorophyll a-b binding protein type 1 member F3,
chloroplastic-like isoform X1 [Cicer arietinum]
Length = 336
Score = 178 bits (452), Expect = 6e-43
Identities = 82/93 (88%), Positives = 89/93 (95%)
Frame = -3
Query: 454 RYCGIEALEPLGIYLPGDINYPGGALFDPLNLSRDPSAFEELKVKEIKNGRLAMVAWLGF 275
RYCGIEALEPLGIYLPGDINYPGGALFDPLNLS+DP AFEELKVKEIKNGRLAM+AWLGF
Sbjct: 240 RYCGIEALEPLGIYLPGDINYPGGALFDPLNLSKDPEAFEELKVKEIKNGRLAMMAWLGF 299
Query: 274 YTQAALTGKGPVQNLLDHIADPFHNNLLSTIKS 176
+ QAALTGKGPVQNL+DHI+DPFHNNLL ++ S
Sbjct: 300 FMQAALTGKGPVQNLMDHISDPFHNNLLGSLNS 332
>gb|EXB56249.1| Chlorophyll a-b binding protein of LHCII type III [Morus notabilis]
Length = 289
Score = 177 bits (449), Expect = 1e-42
Identities = 81/91 (89%), Positives = 88/91 (96%)
Frame = -3
Query: 454 RYCGIEALEPLGIYLPGDINYPGGALFDPLNLSRDPSAFEELKVKEIKNGRLAMVAWLGF 275
RYCGIEALEPLGIYLPGDINYPGGALFDPLNLS+DP AFEELKVKEIKNGRLAMVAWLGF
Sbjct: 197 RYCGIEALEPLGIYLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMVAWLGF 256
Query: 274 YTQAALTGKGPVQNLLDHIADPFHNNLLSTI 182
Y+QAALTGKGP+QNL+DH++DP HNNLLS +
Sbjct: 257 YSQAALTGKGPIQNLIDHVSDPLHNNLLSML 287
>gb|EMJ10548.1| hypothetical protein PRUPE_ppa008546mg [Prunus persica]
Length = 327
Score = 177 bits (449), Expect = 1e-42
Identities = 82/92 (89%), Positives = 88/92 (95%)
Frame = -3
Query: 454 RYCGIEALEPLGIYLPGDINYPGGALFDPLNLSRDPSAFEELKVKEIKNGRLAMVAWLGF 275
RYCGIEALEPLGIYLPGD+NYPGG LFDPLNLSRDP AFEELKVKEIKNGRLAMVAWLGF
Sbjct: 234 RYCGIEALEPLGIYLPGDVNYPGGELFDPLNLSRDPVAFEELKVKEIKNGRLAMVAWLGF 293
Query: 274 YTQAALTGKGPVQNLLDHIADPFHNNLLSTIK 179
Y+QAALTGKGPVQNLL+HI+DP HNN+LS +K
Sbjct: 294 YSQAALTGKGPVQNLLEHISDPLHNNVLSVLK 325
>ref|XP_004169873.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
chloroplastic-like [Cucumis sativus]
Length = 338
Score = 176 bits (447), Expect = 2e-42
Identities = 83/93 (89%), Positives = 87/93 (93%)
Frame = -3
Query: 454 RYCGIEALEPLGIYLPGDINYPGGALFDPLNLSRDPSAFEELKVKEIKNGRLAMVAWLGF 275
RYCGIEALEPLGIYLPGDINYPGG LFDPLNLS+D AFEELKVKEIKNGRLAMVAWLGF
Sbjct: 242 RYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAEAFEELKVKEIKNGRLAMVAWLGF 301
Query: 274 YTQAALTGKGPVQNLLDHIADPFHNNLLSTIKS 176
Y+QAALTGKGPVQNLL+HIADPFHNN LS + S
Sbjct: 302 YSQAALTGKGPVQNLLNHIADPFHNNFLSLLNS 334
>gb|ESW32583.1| hypothetical protein PHAVU_001G000400g [Phaseolus vulgaris]
Length = 329
Score = 176 bits (446), Expect = 3e-42
Identities = 81/94 (86%), Positives = 86/94 (91%)
Frame = -3
Query: 454 RYCGIEALEPLGIYLPGDINYPGGALFDPLNLSRDPSAFEELKVKEIKNGRLAMVAWLGF 275
RYCG EALEPLGIYLPGDINYPGGALFDPLNLS DP AFEELKVKEIKNGRLAMVAWLGF
Sbjct: 232 RYCGTEALEPLGIYLPGDINYPGGALFDPLNLSNDPEAFEELKVKEIKNGRLAMVAWLGF 291
Query: 274 YTQAALTGKGPVQNLLDHIADPFHNNLLSTIKSL 173
Y QAALTGKGPVQNL+DHI+DPFHNN L ++ +
Sbjct: 292 YVQAALTGKGPVQNLIDHISDPFHNNFLDSLNMM 325
>ref|XP_002307004.1| chlorophyll A-B binding family protein [Populus trichocarpa]
gi|222856453|gb|EEE94000.1| chlorophyll A-B binding
family protein [Populus trichocarpa]
Length = 338
Score = 174 bits (440), Expect = 1e-41
Identities = 80/92 (86%), Positives = 87/92 (94%)
Frame = -3
Query: 454 RYCGIEALEPLGIYLPGDINYPGGALFDPLNLSRDPSAFEELKVKEIKNGRLAMVAWLGF 275
RYCGIEALEPLGIYLPGDINYPGG LFDPLNLS+DP +FEELKVKEIKNGRLAMVAWLGF
Sbjct: 245 RYCGIEALEPLGIYLPGDINYPGGILFDPLNLSKDPVSFEELKVKEIKNGRLAMVAWLGF 304
Query: 274 YTQAALTGKGPVQNLLDHIADPFHNNLLSTIK 179
Y QAALTGKGPV+NL++HI+DP HNNL ST+K
Sbjct: 305 YIQAALTGKGPVENLVEHISDPLHNNLFSTLK 336
>ref|XP_006390178.1| hypothetical protein EUTSA_v10018862mg [Eutrema salsugineum]
gi|557086612|gb|ESQ27464.1| hypothetical protein
EUTSA_v10018862mg [Eutrema salsugineum]
Length = 326
Score = 173 bits (439), Expect = 2e-41
Identities = 79/91 (86%), Positives = 86/91 (94%)
Frame = -3
Query: 454 RYCGIEALEPLGIYLPGDINYPGGALFDPLNLSRDPSAFEELKVKEIKNGRLAMVAWLGF 275
RYCGIEALEPLGIYLPGDINYPGG LFDPLNLS+DP AFE+LKVKEIKNGRLAMVAWLGF
Sbjct: 234 RYCGIEALEPLGIYLPGDINYPGGTLFDPLNLSQDPVAFEDLKVKEIKNGRLAMVAWLGF 293
Query: 274 YTQAALTGKGPVQNLLDHIADPFHNNLLSTI 182
Y QAA TGKGPVQNL+DH++DP HNNLL+T+
Sbjct: 294 YAQAAFTGKGPVQNLVDHVSDPLHNNLLATL 324
>ref|XP_006390176.1| hypothetical protein EUTSA_v10018862mg [Eutrema salsugineum]
gi|567120619|ref|XP_006390177.1| hypothetical protein
EUTSA_v10018862mg [Eutrema salsugineum]
gi|557086610|gb|ESQ27462.1| hypothetical protein
EUTSA_v10018862mg [Eutrema salsugineum]
gi|557086611|gb|ESQ27463.1| hypothetical protein
EUTSA_v10018862mg [Eutrema salsugineum]
Length = 241
Score = 173 bits (439), Expect = 2e-41
Identities = 79/91 (86%), Positives = 86/91 (94%)
Frame = -3
Query: 454 RYCGIEALEPLGIYLPGDINYPGGALFDPLNLSRDPSAFEELKVKEIKNGRLAMVAWLGF 275
RYCGIEALEPLGIYLPGDINYPGG LFDPLNLS+DP AFE+LKVKEIKNGRLAMVAWLGF
Sbjct: 149 RYCGIEALEPLGIYLPGDINYPGGTLFDPLNLSQDPVAFEDLKVKEIKNGRLAMVAWLGF 208
Query: 274 YTQAALTGKGPVQNLLDHIADPFHNNLLSTI 182
Y QAA TGKGPVQNL+DH++DP HNNLL+T+
Sbjct: 209 YAQAAFTGKGPVQNLVDHVSDPLHNNLLATL 239
>ref|XP_002887646.1| chlorophyll A-B binding family protein [Arabidopsis lyrata subsp.
lyrata] gi|297333487|gb|EFH63905.1| chlorophyll A-B
binding family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 330
Score = 171 bits (434), Expect = 7e-41
Identities = 78/93 (83%), Positives = 86/93 (92%)
Frame = -3
Query: 454 RYCGIEALEPLGIYLPGDINYPGGALFDPLNLSRDPSAFEELKVKEIKNGRLAMVAWLGF 275
RYCGIEALEPLGIYLPGDINYPGG LFDPLNLS DP AFE+LKVKEIKNGRLAMVAWLGF
Sbjct: 238 RYCGIEALEPLGIYLPGDINYPGGTLFDPLNLSEDPVAFEDLKVKEIKNGRLAMVAWLGF 297
Query: 274 YTQAALTGKGPVQNLLDHIADPFHNNLLSTIKS 176
Y QAA TGKGPVQNL+DH++DP HNNLL+ +++
Sbjct: 298 YAQAAFTGKGPVQNLVDHVSDPLHNNLLAMLQT 330
>ref|XP_006302513.1| hypothetical protein CARUB_v10020611mg, partial [Capsella rubella]
gi|482571223|gb|EOA35411.1| hypothetical protein
CARUB_v10020611mg, partial [Capsella rubella]
Length = 337
Score = 171 bits (432), Expect = 1e-40
Identities = 77/92 (83%), Positives = 85/92 (92%)
Frame = -3
Query: 454 RYCGIEALEPLGIYLPGDINYPGGALFDPLNLSRDPSAFEELKVKEIKNGRLAMVAWLGF 275
RYCGIEALEPLGIYLPGDINYPGG LFDPLNLS DP AFE+LKVKEIKNGRLAMVAWLGF
Sbjct: 245 RYCGIEALEPLGIYLPGDINYPGGTLFDPLNLSEDPVAFEDLKVKEIKNGRLAMVAWLGF 304
Query: 274 YTQAALTGKGPVQNLLDHIADPFHNNLLSTIK 179
Y QAA TGKGP+QNL+DH++DP HNNLL+ ++
Sbjct: 305 YAQAAFTGKGPIQNLVDHVSDPLHNNLLAMLQ 336