BLASTX nr result
ID: Rehmannia23_contig00021460
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00021460
(650 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containi... 66 1e-08
ref|XP_006343097.1| PREDICTED: protein Rf1, mitochondrial-like [... 65 2e-08
ref|XP_004236403.1| PREDICTED: pentatricopeptide repeat-containi... 64 3e-08
gb|EOY25154.1| Tetratricopeptide repeat-like superfamily protein... 64 5e-08
gb|ESW30266.1| hypothetical protein PHAVU_002G138600g [Phaseolus... 60 4e-07
ref|XP_006572968.1| PREDICTED: pentatricopeptide repeat-containi... 59 9e-07
ref|XP_004512504.1| PREDICTED: putative pentatricopeptide repeat... 58 2e-06
ref|XP_006368375.1| hypothetical protein POPTR_0001s02170g [Popu... 57 4e-06
ref|XP_002326536.1| predicted protein [Populus trichocarpa] 57 4e-06
>ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
gi|297742067|emb|CBI33854.3| unnamed protein product
[Vitis vinifera]
Length = 767
Score = 65.9 bits (159), Expect = 1e-08
Identities = 32/59 (54%), Positives = 42/59 (71%)
Frame = -1
Query: 179 LFSAVVRVLKSLNWEISRKVCFARTVDKYGFDQSLMAFKMFVKVYACAEMQLEVYALLR 3
L VV+V KSLNWE++R + F+ T+ KYGF +S+ AF+ V V A A M +EVYALLR
Sbjct: 90 LSPVVVKVFKSLNWEVARHIKFSTTMKKYGFSRSIDAFRTVVNVLALAGMHMEVYALLR 148
>ref|XP_006343097.1| PREDICTED: protein Rf1, mitochondrial-like [Solanum tuberosum]
Length = 756
Score = 65.1 bits (157), Expect = 2e-08
Identities = 46/143 (32%), Positives = 70/143 (48%), Gaps = 2/143 (1%)
Frame = -1
Query: 425 MGACFFPTNYSFSLKFGISRQLNFLRRWITVKDCSFLCNKYRR--VSAVPLLDDSDYYXX 252
MG P SFSL F +L F K+ LC KY S++PLL DSD
Sbjct: 1 MGLGLLPRK-SFSLLFKDLHELGFF------KEQRSLCRKYYHGASSSLPLLYDSD---- 49
Query: 251 XXXXXXXXXXNFLRESNRELKSVELFSAVVRVLKSLNWEISRKVCFARTVDKYGFDQSLM 72
++ K +++S VV V KSL+WE+++++ F +++ YG S+
Sbjct: 50 --------KAVIPTRNSLNWKGRKVYSVVVTVCKSLSWEVAKEIPFEKSLKNYGLYHSIS 101
Query: 71 AFKMFVKVYACAEMQLEVYALLR 3
++M + +A A M LEVY LL+
Sbjct: 102 GYRMMIHTFAFAGMDLEVYTLLK 124
>ref|XP_004236403.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Solanum lycopersicum]
Length = 784
Score = 64.3 bits (155), Expect = 3e-08
Identities = 46/143 (32%), Positives = 70/143 (48%), Gaps = 2/143 (1%)
Frame = -1
Query: 425 MGACFFPTNYSFSLKFGISRQLNFLRRWITVKDCSFLCNKYRR--VSAVPLLDDSDYYXX 252
MG P SFSL F +L F K+ LC KY S++PLL DSD
Sbjct: 1 MGLGLLPRK-SFSLLFKHLHKLGFF------KEQRSLCRKYYHGASSSLPLLYDSD---- 49
Query: 251 XXXXXXXXXXNFLRESNRELKSVELFSAVVRVLKSLNWEISRKVCFARTVDKYGFDQSLM 72
++ K +++S VVRV KSL+W++ R++ F ++ KYG S+
Sbjct: 50 --------KAVIPTRNSLNWKGRKVYSVVVRVCKSLSWKVVREISFVESLAKYGLYHSIN 101
Query: 71 AFKMFVKVYACAEMQLEVYALLR 3
++M + +A A M +EV+ LL+
Sbjct: 102 GYRMIIHTFAFAGMDMEVHTLLK 124
>gb|EOY25154.1| Tetratricopeptide repeat-like superfamily protein, putative
[Theobroma cacao]
Length = 746
Score = 63.5 bits (153), Expect = 5e-08
Identities = 28/55 (50%), Positives = 40/55 (72%)
Frame = -1
Query: 167 VVRVLKSLNWEISRKVCFARTVDKYGFDQSLMAFKMFVKVYACAEMQLEVYALLR 3
VVRV KSLNW+I+R++ F YGFD S+ AF++ + ++A A MQ+E +ALLR
Sbjct: 81 VVRVFKSLNWDIAREIRFNMAAKMYGFDHSMYAFRIIIHIFAMAGMQMEAHALLR 135
>gb|ESW30266.1| hypothetical protein PHAVU_002G138600g [Phaseolus vulgaris]
Length = 831
Score = 60.5 bits (145), Expect = 4e-07
Identities = 29/60 (48%), Positives = 41/60 (68%)
Frame = -1
Query: 182 ELFSAVVRVLKSLNWEISRKVCFARTVDKYGFDQSLMAFKMFVKVYACAEMQLEVYALLR 3
E F V RVLKSL+W ++R+V F V+ +GF S+ F++ V +A A M+LEV+ALLR
Sbjct: 63 EYFPLVSRVLKSLSWRVAREVRFGSWVESHGFSHSINCFRIIVHAFALAGMRLEVFALLR 122
>ref|XP_006572968.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like isoform X1 [Glycine max]
gi|571433663|ref|XP_006572969.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like isoform X2 [Glycine max]
gi|571433665|ref|XP_006572970.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like isoform X3 [Glycine max]
gi|571433667|ref|XP_006572971.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like isoform X4 [Glycine max]
Length = 734
Score = 59.3 bits (142), Expect = 9e-07
Identities = 29/60 (48%), Positives = 40/60 (66%)
Frame = -1
Query: 182 ELFSAVVRVLKSLNWEISRKVCFARTVDKYGFDQSLMAFKMFVKVYACAEMQLEVYALLR 3
ELF V RV KSL+W ++RK F V+ +GF S+ F++ V +A A M+LEV+ALLR
Sbjct: 64 ELFPLVSRVFKSLSWSVARKKKFGNWVECHGFSHSISCFRIIVHAFALAGMRLEVWALLR 123
>ref|XP_004512504.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like isoform X1 [Cicer arietinum]
gi|502162449|ref|XP_004512505.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At2g02150-like isoform X2 [Cicer arietinum]
gi|502162452|ref|XP_004512506.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At2g02150-like isoform X3 [Cicer arietinum]
Length = 666
Score = 58.2 bits (139), Expect = 2e-06
Identities = 25/62 (40%), Positives = 41/62 (66%)
Frame = -1
Query: 188 SVELFSAVVRVLKSLNWEISRKVCFARTVDKYGFDQSLMAFKMFVKVYACAEMQLEVYAL 9
+ +F VVRV K+LNW ++R++ F V +GF S+ +F++ + +A A M LEV+AL
Sbjct: 46 NTRMFHLVVRVFKTLNWSVAREIRFKGWVQSHGFSHSINSFRIIIHTFAFAGMHLEVFAL 105
Query: 8 LR 3
+R
Sbjct: 106 IR 107
>ref|XP_006368375.1| hypothetical protein POPTR_0001s02170g [Populus trichocarpa]
gi|550346286|gb|ERP64944.1| hypothetical protein
POPTR_0001s02170g [Populus trichocarpa]
Length = 697
Score = 57.4 bits (137), Expect = 4e-06
Identities = 29/62 (46%), Positives = 42/62 (67%)
Frame = -1
Query: 191 KSVELFSAVVRVLKSLNWEISRKVCFARTVDKYGFDQSLMAFKMFVKVYACAEMQLEVYA 12
K EL VV +LK+LNWE++R+V F+++V+ YGF S+ AF+ V V+A A +Q E
Sbjct: 22 KRCELSRLVVELLKTLNWEVARQVKFSKSVNVYGFFYSINAFRTIVHVFALAGLQREAQY 81
Query: 11 LL 6
LL
Sbjct: 82 LL 83
>ref|XP_002326536.1| predicted protein [Populus trichocarpa]
Length = 697
Score = 57.4 bits (137), Expect = 4e-06
Identities = 29/62 (46%), Positives = 42/62 (67%)
Frame = -1
Query: 191 KSVELFSAVVRVLKSLNWEISRKVCFARTVDKYGFDQSLMAFKMFVKVYACAEMQLEVYA 12
K EL VV +LK+LNWE++R+V F+++V+ YGF S+ AF+ V V+A A +Q E
Sbjct: 22 KRCELSRLVVELLKTLNWEVARQVKFSKSVNVYGFFYSINAFRTIVHVFALAGLQREAQY 81
Query: 11 LL 6
LL
Sbjct: 82 LL 83