BLASTX nr result
ID: Rehmannia23_contig00021447
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00021447
(606 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [... 96 8e-18
emb|CBI31382.3| unnamed protein product [Vitis vinifera] 96 8e-18
ref|XP_004142445.1| PREDICTED: RNA-binding protein Nova-2-like [... 94 2e-17
ref|XP_006379517.1| hypothetical protein POPTR_0008s03070g [Popu... 94 3e-17
ref|XP_006379516.1| hypothetical protein POPTR_0008s03070g [Popu... 94 3e-17
gb|EOY18878.1| Binding to TOMV RNA 1L (long form) isoform 6 [The... 93 5e-17
gb|EOY18874.1| Binding to TOMV RNA 1L isoform 2 [Theobroma cacao] 93 5e-17
gb|EOY18873.1| Binding to TOMV RNA 1L (long form) isoform 1 [The... 93 5e-17
gb|EXB39447.1| RNA-binding protein Nova-1 [Morus notabilis] 92 8e-17
gb|EPS59477.1| hypothetical protein M569_15330, partial [Genlise... 92 8e-17
ref|XP_003556300.1| PREDICTED: RNA-binding protein Nova-2-like [... 92 1e-16
ref|XP_006589354.1| PREDICTED: RNA-binding protein Nova-2-like i... 91 2e-16
ref|XP_006378792.1| hypothetical protein POPTR_0010s23710g [Popu... 91 2e-16
ref|XP_003536289.1| PREDICTED: RNA-binding protein Nova-2-like i... 91 2e-16
ref|XP_002316405.1| hypothetical protein POPTR_0010s23710g [Popu... 91 2e-16
ref|XP_006360517.1| PREDICTED: RNA-binding protein Nova-2-like [... 90 5e-16
ref|XP_002532622.1| Far upstream element-binding protein, putati... 90 5e-16
ref|XP_006345845.1| PREDICTED: RNA-binding protein Nova-2-like i... 89 7e-16
ref|XP_006345844.1| PREDICTED: RNA-binding protein Nova-2-like i... 89 7e-16
ref|XP_004239711.1| PREDICTED: RNA-binding protein Nova-1-like [... 89 7e-16
>ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [Vitis vinifera]
Length = 309
Score = 95.9 bits (237), Expect = 8e-18
Identities = 48/58 (82%), Positives = 55/58 (94%)
Frame = +3
Query: 3 GRNIMEMSQLSGARIKISDRGDFMSGTSNRKVTITGSQRAIHAAESIILQKVASVAER 176
GRNIM++SQ SGARIKISDRGDFMSGT++RKVTITGSQRAI AAES+I+QKVAS +ER
Sbjct: 252 GRNIMDISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAESMIMQKVASASER 309
>emb|CBI31382.3| unnamed protein product [Vitis vinifera]
Length = 357
Score = 95.9 bits (237), Expect = 8e-18
Identities = 48/58 (82%), Positives = 55/58 (94%)
Frame = +3
Query: 3 GRNIMEMSQLSGARIKISDRGDFMSGTSNRKVTITGSQRAIHAAESIILQKVASVAER 176
GRNIM++SQ SGARIKISDRGDFMSGT++RKVTITGSQRAI AAES+I+QKVAS +ER
Sbjct: 300 GRNIMDISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAESMIMQKVASASER 357
>ref|XP_004142445.1| PREDICTED: RNA-binding protein Nova-2-like [Cucumis sativus]
gi|449527683|ref|XP_004170839.1| PREDICTED: RNA-binding
protein Nova-2-like [Cucumis sativus]
Length = 326
Score = 94.4 bits (233), Expect = 2e-17
Identities = 48/58 (82%), Positives = 54/58 (93%)
Frame = +3
Query: 3 GRNIMEMSQLSGARIKISDRGDFMSGTSNRKVTITGSQRAIHAAESIILQKVASVAER 176
GRNI+E+SQ SGARIKISDRGDFMSGT++RKVTITGSQRAI AAES+ILQKVA +ER
Sbjct: 265 GRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAESMILQKVAYASER 322
>ref|XP_006379517.1| hypothetical protein POPTR_0008s03070g [Populus trichocarpa]
gi|550332311|gb|ERP57314.1| hypothetical protein
POPTR_0008s03070g [Populus trichocarpa]
Length = 312
Score = 94.0 bits (232), Expect = 3e-17
Identities = 46/58 (79%), Positives = 54/58 (93%)
Frame = +3
Query: 3 GRNIMEMSQLSGARIKISDRGDFMSGTSNRKVTITGSQRAIHAAESIILQKVASVAER 176
GRNIME+SQ SGARIKISDRGDFMSGT++RK+TITGSQRAIHAAE +I+QKV+ +ER
Sbjct: 252 GRNIMEISQNSGARIKISDRGDFMSGTNDRKITITGSQRAIHAAEDMIMQKVSYASER 309
>ref|XP_006379516.1| hypothetical protein POPTR_0008s03070g [Populus trichocarpa]
gi|118486946|gb|ABK95306.1| unknown [Populus
trichocarpa] gi|550332310|gb|ERP57313.1| hypothetical
protein POPTR_0008s03070g [Populus trichocarpa]
Length = 313
Score = 94.0 bits (232), Expect = 3e-17
Identities = 46/58 (79%), Positives = 54/58 (93%)
Frame = +3
Query: 3 GRNIMEMSQLSGARIKISDRGDFMSGTSNRKVTITGSQRAIHAAESIILQKVASVAER 176
GRNIME+SQ SGARIKISDRGDFMSGT++RK+TITGSQRAIHAAE +I+QKV+ +ER
Sbjct: 253 GRNIMEISQNSGARIKISDRGDFMSGTNDRKITITGSQRAIHAAEDMIMQKVSYASER 310
>gb|EOY18878.1| Binding to TOMV RNA 1L (long form) isoform 6 [Theobroma cacao]
Length = 314
Score = 93.2 bits (230), Expect = 5e-17
Identities = 47/58 (81%), Positives = 53/58 (91%)
Frame = +3
Query: 3 GRNIMEMSQLSGARIKISDRGDFMSGTSNRKVTITGSQRAIHAAESIILQKVASVAER 176
GRNIME+SQLSGARIKISDRGDFMSGT++RKVTITGSQRAI AES+I+QKVA +R
Sbjct: 254 GRNIMEISQLSGARIKISDRGDFMSGTTDRKVTITGSQRAIRQAESMIMQKVAYATDR 311
>gb|EOY18874.1| Binding to TOMV RNA 1L isoform 2 [Theobroma cacao]
Length = 334
Score = 93.2 bits (230), Expect = 5e-17
Identities = 47/58 (81%), Positives = 53/58 (91%)
Frame = +3
Query: 3 GRNIMEMSQLSGARIKISDRGDFMSGTSNRKVTITGSQRAIHAAESIILQKVASVAER 176
GRNIME+SQLSGARIKISDRGDFMSGT++RKVTITGSQRAI AES+I+QKVA +R
Sbjct: 274 GRNIMEISQLSGARIKISDRGDFMSGTTDRKVTITGSQRAIRQAESMIMQKVAYATDR 331
>gb|EOY18873.1| Binding to TOMV RNA 1L (long form) isoform 1 [Theobroma cacao]
gi|508726978|gb|EOY18875.1| Binding to TOMV RNA 1L (long
form) isoform 1 [Theobroma cacao]
gi|508726979|gb|EOY18876.1| Binding to TOMV RNA 1L (long
form) isoform 1 [Theobroma cacao]
Length = 313
Score = 93.2 bits (230), Expect = 5e-17
Identities = 47/58 (81%), Positives = 53/58 (91%)
Frame = +3
Query: 3 GRNIMEMSQLSGARIKISDRGDFMSGTSNRKVTITGSQRAIHAAESIILQKVASVAER 176
GRNIME+SQLSGARIKISDRGDFMSGT++RKVTITGSQRAI AES+I+QKVA +R
Sbjct: 253 GRNIMEISQLSGARIKISDRGDFMSGTTDRKVTITGSQRAIRQAESMIMQKVAYATDR 310
>gb|EXB39447.1| RNA-binding protein Nova-1 [Morus notabilis]
Length = 349
Score = 92.4 bits (228), Expect = 8e-17
Identities = 47/58 (81%), Positives = 54/58 (93%)
Frame = +3
Query: 3 GRNIMEMSQLSGARIKISDRGDFMSGTSNRKVTITGSQRAIHAAESIILQKVASVAER 176
GRNIME+SQ SGARIKISDRGDF+SGT++RKVTITGSQRAI AAES+I+QKVA +ER
Sbjct: 288 GRNIMEISQASGARIKISDRGDFLSGTTDRKVTITGSQRAICAAESMIMQKVAYASER 345
>gb|EPS59477.1| hypothetical protein M569_15330, partial [Genlisea aurea]
Length = 214
Score = 92.4 bits (228), Expect = 8e-17
Identities = 47/57 (82%), Positives = 52/57 (91%)
Frame = +3
Query: 3 GRNIMEMSQLSGARIKISDRGDFMSGTSNRKVTITGSQRAIHAAESIILQKVASVAE 173
GRNI+E+SQLSGARIKISDRGDF+ GTSNRKVTI GSQRAI AAES+I QK+ASV E
Sbjct: 158 GRNILEISQLSGARIKISDRGDFIPGTSNRKVTIIGSQRAIRAAESMISQKIASVGE 214
>ref|XP_003556300.1| PREDICTED: RNA-binding protein Nova-2-like [Glycine max]
Length = 337
Score = 91.7 bits (226), Expect = 1e-16
Identities = 46/58 (79%), Positives = 53/58 (91%)
Frame = +3
Query: 3 GRNIMEMSQLSGARIKISDRGDFMSGTSNRKVTITGSQRAIHAAESIILQKVASVAER 176
GRNIME+SQ+SGARIKISDRGD++SGT++RKVTITGSQRAI AES+ILQKVA ER
Sbjct: 276 GRNIMEISQVSGARIKISDRGDYISGTTDRKVTITGSQRAIRTAESMILQKVAYATER 333
>ref|XP_006589354.1| PREDICTED: RNA-binding protein Nova-2-like isoform X2 [Glycine max]
Length = 332
Score = 90.9 bits (224), Expect = 2e-16
Identities = 46/58 (79%), Positives = 52/58 (89%)
Frame = +3
Query: 3 GRNIMEMSQLSGARIKISDRGDFMSGTSNRKVTITGSQRAIHAAESIILQKVASVAER 176
GRNIME+SQ SGARIKISDRGD++SGT++RKVTITGSQRAI AES+ILQKVA ER
Sbjct: 271 GRNIMEISQASGARIKISDRGDYVSGTTDRKVTITGSQRAIRTAESMILQKVAYATER 328
>ref|XP_006378792.1| hypothetical protein POPTR_0010s23710g [Populus trichocarpa]
gi|550330463|gb|ERP56589.1| hypothetical protein
POPTR_0010s23710g [Populus trichocarpa]
Length = 313
Score = 90.9 bits (224), Expect = 2e-16
Identities = 44/58 (75%), Positives = 53/58 (91%)
Frame = +3
Query: 3 GRNIMEMSQLSGARIKISDRGDFMSGTSNRKVTITGSQRAIHAAESIILQKVASVAER 176
GRNIME+SQ SGAR+KISDRGDFMSGT++RK+TITGSQRAI AAE +I+QKV+ +ER
Sbjct: 253 GRNIMEISQTSGARLKISDRGDFMSGTTDRKITITGSQRAIRAAEDMIMQKVSYASER 310
>ref|XP_003536289.1| PREDICTED: RNA-binding protein Nova-2-like isoform X1 [Glycine max]
Length = 337
Score = 90.9 bits (224), Expect = 2e-16
Identities = 46/58 (79%), Positives = 52/58 (89%)
Frame = +3
Query: 3 GRNIMEMSQLSGARIKISDRGDFMSGTSNRKVTITGSQRAIHAAESIILQKVASVAER 176
GRNIME+SQ SGARIKISDRGD++SGT++RKVTITGSQRAI AES+ILQKVA ER
Sbjct: 276 GRNIMEISQASGARIKISDRGDYVSGTTDRKVTITGSQRAIRTAESMILQKVAYATER 333
>ref|XP_002316405.1| hypothetical protein POPTR_0010s23710g [Populus trichocarpa]
gi|222865445|gb|EEF02576.1| hypothetical protein
POPTR_0010s23710g [Populus trichocarpa]
Length = 334
Score = 90.9 bits (224), Expect = 2e-16
Identities = 44/58 (75%), Positives = 53/58 (91%)
Frame = +3
Query: 3 GRNIMEMSQLSGARIKISDRGDFMSGTSNRKVTITGSQRAIHAAESIILQKVASVAER 176
GRNIME+SQ SGAR+KISDRGDFMSGT++RK+TITGSQRAI AAE +I+QKV+ +ER
Sbjct: 274 GRNIMEISQTSGARLKISDRGDFMSGTTDRKITITGSQRAIRAAEDMIMQKVSYASER 331
>ref|XP_006360517.1| PREDICTED: RNA-binding protein Nova-2-like [Solanum tuberosum]
Length = 328
Score = 89.7 bits (221), Expect = 5e-16
Identities = 45/58 (77%), Positives = 54/58 (93%)
Frame = +3
Query: 3 GRNIMEMSQLSGARIKISDRGDFMSGTSNRKVTITGSQRAIHAAESIILQKVASVAER 176
GR+I+E+SQLSGARIKISDRGDF+SGTS+RKVTITGSQRAI AES+I QK+A+V+ R
Sbjct: 270 GRSIIEISQLSGARIKISDRGDFLSGTSDRKVTITGSQRAIRTAESMISQKIATVSVR 327
>ref|XP_002532622.1| Far upstream element-binding protein, putative [Ricinus communis]
gi|223527642|gb|EEF29753.1| Far upstream element-binding
protein, putative [Ricinus communis]
Length = 314
Score = 89.7 bits (221), Expect = 5e-16
Identities = 44/58 (75%), Positives = 52/58 (89%)
Frame = +3
Query: 3 GRNIMEMSQLSGARIKISDRGDFMSGTSNRKVTITGSQRAIHAAESIILQKVASVAER 176
GRNIME+SQ+SGARIKISDRGDFMSGT++RK+ ITGSQRAI AE +I+QKVA +ER
Sbjct: 254 GRNIMEISQVSGARIKISDRGDFMSGTNDRKIIITGSQRAIRTAEGMIMQKVAYASER 311
>ref|XP_006345845.1| PREDICTED: RNA-binding protein Nova-2-like isoform X2 [Solanum
tuberosum]
Length = 326
Score = 89.4 bits (220), Expect = 7e-16
Identities = 45/57 (78%), Positives = 53/57 (92%)
Frame = +3
Query: 3 GRNIMEMSQLSGARIKISDRGDFMSGTSNRKVTITGSQRAIHAAESIILQKVASVAE 173
GR++ME+SQ+SGARIKISDRGDFMSGTS+RKVTITGSQRAI AES+I +KVA+V E
Sbjct: 269 GRSVMEISQVSGARIKISDRGDFMSGTSDRKVTITGSQRAISIAESMISKKVATVTE 325
>ref|XP_006345844.1| PREDICTED: RNA-binding protein Nova-2-like isoform X1 [Solanum
tuberosum]
Length = 327
Score = 89.4 bits (220), Expect = 7e-16
Identities = 45/57 (78%), Positives = 53/57 (92%)
Frame = +3
Query: 3 GRNIMEMSQLSGARIKISDRGDFMSGTSNRKVTITGSQRAIHAAESIILQKVASVAE 173
GR++ME+SQ+SGARIKISDRGDFMSGTS+RKVTITGSQRAI AES+I +KVA+V E
Sbjct: 270 GRSVMEISQVSGARIKISDRGDFMSGTSDRKVTITGSQRAISIAESMISKKVATVTE 326
>ref|XP_004239711.1| PREDICTED: RNA-binding protein Nova-1-like [Solanum lycopersicum]
Length = 328
Score = 89.4 bits (220), Expect = 7e-16
Identities = 45/57 (78%), Positives = 53/57 (92%)
Frame = +3
Query: 3 GRNIMEMSQLSGARIKISDRGDFMSGTSNRKVTITGSQRAIHAAESIILQKVASVAE 173
GR++ME+SQ+SGARIKISDRGDFMSGTS+RKVTITGSQRAI AES+I +KVA+V E
Sbjct: 271 GRSVMEISQVSGARIKISDRGDFMSGTSDRKVTITGSQRAISIAESMISKKVATVTE 327