BLASTX nr result

ID: Rehmannia23_contig00021382 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00021382
         (380 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001275467.1| 1,4-alpha-glucan-branching enzyme 2-2, chlor...    62   1e-07
emb|CAB40748.1| starch branching enzyme II [Solanum tuberosum]         61   1e-07
emb|CAB40749.1| starch branching enzyme II [Solanum tuberosum]         61   1e-07
emb|CAB40743.1| starch branching enzyme II [Solanum tuberosum]         59   7e-07
ref|XP_004246561.1| PREDICTED: 1,4-alpha-glucan-branching enzyme...    57   3e-06

>ref|NP_001275467.1| 1,4-alpha-glucan-branching enzyme 2-2,
           chloroplastic/amyloplastic-like [Solanum tuberosum]
           gi|4584509|emb|CAB40746.1| starch branching enzyme II
           [Solanum tuberosum]
          Length = 878

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 33/52 (63%), Positives = 39/52 (75%)
 Frame = -2

Query: 157 MVYTLPGVRLPTVPSAYKLSSNGWSSHVDTRNAHLSFFVKNKSNSRKIFSGK 2
           MVYTL GVR PTVPS YK  SNG+SS+ D RNA++S F+K  S SRKI + K
Sbjct: 1   MVYTLSGVRFPTVPSVYK--SNGFSSNGDRRNANISVFLKKHSLSRKILAEK 50


>emb|CAB40748.1| starch branching enzyme II [Solanum tuberosum]
          Length = 882

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 33/52 (63%), Positives = 39/52 (75%)
 Frame = -2

Query: 157 MVYTLPGVRLPTVPSAYKLSSNGWSSHVDTRNAHLSFFVKNKSNSRKIFSGK 2
           MVYTL GVR PTVPS YK  SNG+SS+ D RNA++S F+K  S SRKI + K
Sbjct: 1   MVYTLSGVRFPTVPSVYK--SNGFSSNGDRRNANVSVFLKKHSLSRKILAEK 50


>emb|CAB40749.1| starch branching enzyme II [Solanum tuberosum]
          Length = 433

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 33/52 (63%), Positives = 39/52 (75%)
 Frame = -2

Query: 157 MVYTLPGVRLPTVPSAYKLSSNGWSSHVDTRNAHLSFFVKNKSNSRKIFSGK 2
           MVYTL GVR PTVPS YK  SNG+SS+ D RNA++S F+K  S SRKI + K
Sbjct: 1   MVYTLSGVRFPTVPSVYK--SNGFSSNGDRRNANVSVFLKKHSLSRKILAEK 50


>emb|CAB40743.1| starch branching enzyme II [Solanum tuberosum]
          Length = 871

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 32/52 (61%), Positives = 38/52 (73%)
 Frame = -2

Query: 157 MVYTLPGVRLPTVPSAYKLSSNGWSSHVDTRNAHLSFFVKNKSNSRKIFSGK 2
           MVY L GVR PTVPS YK  SNG+SS+ D RNA++S F+K  S SRKI + K
Sbjct: 1   MVYILSGVRFPTVPSVYK--SNGFSSNGDRRNANVSVFLKKHSLSRKILAEK 50


>ref|XP_004246561.1| PREDICTED: 1,4-alpha-glucan-branching enzyme 2-2,
           chloroplastic/amyloplastic-like [Solanum lycopersicum]
          Length = 876

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 33/53 (62%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
 Frame = -2

Query: 157 MVYTLPGVRLPTVPSAYKLSSNGW-SSHVDTRNAHLSFFVKNKSNSRKIFSGK 2
           MVYTL GVR PTVPS YK  SNG+ SS+ D RNA++S F+K  S SRKI + K
Sbjct: 1   MVYTLSGVRFPTVPSVYK--SNGFTSSNGDRRNANVSVFLKKHSLSRKILAEK 51


Top