BLASTX nr result

ID: Rehmannia23_contig00021341 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00021341
         (360 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOX93731.1| RNA-binding CRS1 / YhbY domain protein [Theobroma...    64   3e-08
gb|EMJ02461.1| hypothetical protein PRUPE_ppa008449mg [Prunus pe...    63   4e-08
ref|XP_002263852.1| PREDICTED: uncharacterized CRM domain-contai...    58   1e-06
emb|CBI29719.3| unnamed protein product [Vitis vinifera]               58   1e-06

>gb|EOX93731.1| RNA-binding CRS1 / YhbY domain protein [Theobroma cacao]
          Length = 657

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 44/124 (35%), Positives = 61/124 (49%), Gaps = 5/124 (4%)
 Frame = -3

Query: 358 RAVKKYIPRXXXXXXXXXXXXESKTSMSEEKQSTEACNVDSE--SNQHFEGSERLKELLA 185
           RAV+KYIP+            E++    +  Q+T+  NVDS   S+  FEGS +LKE+L 
Sbjct: 491 RAVRKYIPKLEQDLELLHAQAENRPDPMQPVQNTDNDNVDSRNISSLQFEGSNKLKEILD 550

Query: 184 KTXXXXXXXXXXXXXXS---EALSDIFXXXXXXXXXXXXXKPLYMDEFEKIPVHSDREED 14
           ++              +   E LSDIF             +PLY+DEF+K PV SDRE +
Sbjct: 551 ESKELSENESTTDSLMASDSEDLSDIFETESDTETERREERPLYLDEFDKFPVESDREPE 610

Query: 13  DFEE 2
             EE
Sbjct: 611 HSEE 614


>gb|EMJ02461.1| hypothetical protein PRUPE_ppa008449mg [Prunus persica]
          Length = 331

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 44/128 (34%), Positives = 62/128 (48%), Gaps = 9/128 (7%)
 Frame = -3

Query: 358 RAVKKYIPRXXXXXXXXXXXXESK----TSMSEEKQSTEACNVDSESNQHF--EGSERLK 197
           RAV+KYIP+            + K    T   EE Q T+  +VDS S+ +F  E S++LK
Sbjct: 161 RAVRKYIPKLEQDLDLLRAQAKRKPEIETDAIEETQETDIDSVDSRSSSNFKLEPSDKLK 220

Query: 196 ELLAKTXXXXXXXXXXXXXXS---EALSDIFXXXXXXXXXXXXXKPLYMDEFEKIPVHSD 26
           E++ ++                  E LSDIF             +PLY++EFEK PV SD
Sbjct: 221 EIIGRSRGCSEDDLVTDSEMPSDSEHLSDIFETDSDKETEEKAERPLYLEEFEKFPVESD 280

Query: 25  REEDDFEE 2
            E +DFE+
Sbjct: 281 GEPEDFED 288


>ref|XP_002263852.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
           chloroplastic-like [Vitis vinifera]
          Length = 401

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 45/128 (35%), Positives = 63/128 (49%), Gaps = 9/128 (7%)
 Frame = -3

Query: 358 RAVKKYIPRXXXXXXXXXXXXE----SKTSMSEEKQSTEACNVDSE--SNQHFEGSERLK 197
           RAV+KYIPR            +    +KT   E+ Q+    +++S+  SN   E S++L+
Sbjct: 231 RAVRKYIPRLEGDLELLQAQAKMQAENKTEAVEDFQNANIDSINSQGISNLQPENSDKLR 290

Query: 196 ELLA---KTXXXXXXXXXXXXXXSEALSDIFXXXXXXXXXXXXXKPLYMDEFEKIPVHSD 26
           ELLA   ++              SEALSDIF             + LY++EFEK PV SD
Sbjct: 291 ELLAGNNESSEEESLTDSGTESCSEALSDIFESDSDTDTKEKAEQLLYLNEFEKFPVESD 350

Query: 25  REEDDFEE 2
            E +DFEE
Sbjct: 351 GEPEDFEE 358


>emb|CBI29719.3| unnamed protein product [Vitis vinifera]
          Length = 331

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 45/128 (35%), Positives = 63/128 (49%), Gaps = 9/128 (7%)
 Frame = -3

Query: 358 RAVKKYIPRXXXXXXXXXXXXE----SKTSMSEEKQSTEACNVDSE--SNQHFEGSERLK 197
           RAV+KYIPR            +    +KT   E+ Q+    +++S+  SN   E S++L+
Sbjct: 161 RAVRKYIPRLEGDLELLQAQAKMQAENKTEAVEDFQNANIDSINSQGISNLQPENSDKLR 220

Query: 196 ELLA---KTXXXXXXXXXXXXXXSEALSDIFXXXXXXXXXXXXXKPLYMDEFEKIPVHSD 26
           ELLA   ++              SEALSDIF             + LY++EFEK PV SD
Sbjct: 221 ELLAGNNESSEEESLTDSGTESCSEALSDIFESDSDTDTKEKAEQLLYLNEFEKFPVESD 280

Query: 25  REEDDFEE 2
            E +DFEE
Sbjct: 281 GEPEDFEE 288


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