BLASTX nr result
ID: Rehmannia23_contig00020914
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00020914
(380 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006345845.1| PREDICTED: RNA-binding protein Nova-2-like i... 65 7e-09
ref|XP_006345844.1| PREDICTED: RNA-binding protein Nova-2-like i... 65 7e-09
ref|XP_004239711.1| PREDICTED: RNA-binding protein Nova-1-like [... 65 7e-09
ref|XP_004250025.1| PREDICTED: RNA-binding protein Nova-2-like [... 61 1e-07
ref|XP_006360517.1| PREDICTED: RNA-binding protein Nova-2-like [... 60 2e-07
ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [... 60 4e-07
emb|CBI31382.3| unnamed protein product [Vitis vinifera] 60 4e-07
ref|XP_006398902.1| hypothetical protein EUTSA_v10014068mg [Eutr... 59 9e-07
ref|XP_006398901.1| hypothetical protein EUTSA_v10014068mg [Eutr... 59 9e-07
ref|NP_850764.1| TOMV RNA binding protein [Arabidopsis thaliana]... 58 1e-06
ref|XP_002873150.1| hypothetical protein ARALYDRAFT_487225 [Arab... 58 1e-06
dbj|BAH20084.1| AT5G04430 [Arabidopsis thaliana] 58 1e-06
ref|NP_196063.1| TOMV RNA binding protein [Arabidopsis thaliana]... 58 1e-06
gb|EOY18878.1| Binding to TOMV RNA 1L (long form) isoform 6 [The... 57 2e-06
gb|EOY18874.1| Binding to TOMV RNA 1L isoform 2 [Theobroma cacao] 57 2e-06
gb|EOY18873.1| Binding to TOMV RNA 1L (long form) isoform 1 [The... 57 2e-06
ref|XP_004142445.1| PREDICTED: RNA-binding protein Nova-2-like [... 57 3e-06
ref|XP_006378792.1| hypothetical protein POPTR_0010s23710g [Popu... 56 4e-06
ref|XP_004496142.1| PREDICTED: RNA-binding protein Nova-2-like i... 56 4e-06
ref|XP_004496141.1| PREDICTED: RNA-binding protein Nova-2-like i... 56 4e-06
>ref|XP_006345845.1| PREDICTED: RNA-binding protein Nova-2-like isoform X2 [Solanum
tuberosum]
Length = 326
Score = 65.5 bits (158), Expect = 7e-09
Identities = 32/38 (84%), Positives = 36/38 (94%)
Frame = +1
Query: 1 GDFMSGTSDRKVTITGSQRAIRLAESMISRKIDSVTES 114
GDFMSGTSDRKVTITGSQRAI +AESMIS+K+ +VTES
Sbjct: 289 GDFMSGTSDRKVTITGSQRAISIAESMISKKVATVTES 326
>ref|XP_006345844.1| PREDICTED: RNA-binding protein Nova-2-like isoform X1 [Solanum
tuberosum]
Length = 327
Score = 65.5 bits (158), Expect = 7e-09
Identities = 32/38 (84%), Positives = 36/38 (94%)
Frame = +1
Query: 1 GDFMSGTSDRKVTITGSQRAIRLAESMISRKIDSVTES 114
GDFMSGTSDRKVTITGSQRAI +AESMIS+K+ +VTES
Sbjct: 290 GDFMSGTSDRKVTITGSQRAISIAESMISKKVATVTES 327
>ref|XP_004239711.1| PREDICTED: RNA-binding protein Nova-1-like [Solanum lycopersicum]
Length = 328
Score = 65.5 bits (158), Expect = 7e-09
Identities = 32/38 (84%), Positives = 36/38 (94%)
Frame = +1
Query: 1 GDFMSGTSDRKVTITGSQRAIRLAESMISRKIDSVTES 114
GDFMSGTSDRKVTITGSQRAI +AESMIS+K+ +VTES
Sbjct: 291 GDFMSGTSDRKVTITGSQRAISIAESMISKKVATVTES 328
>ref|XP_004250025.1| PREDICTED: RNA-binding protein Nova-2-like [Solanum lycopersicum]
Length = 328
Score = 61.2 bits (147), Expect = 1e-07
Identities = 29/36 (80%), Positives = 34/36 (94%)
Frame = +1
Query: 1 GDFMSGTSDRKVTITGSQRAIRLAESMISRKIDSVT 108
GDF+SGTSDRKVTITGSQRAIR AESMISRK+ +++
Sbjct: 290 GDFLSGTSDRKVTITGSQRAIRTAESMISRKVATIS 325
>ref|XP_006360517.1| PREDICTED: RNA-binding protein Nova-2-like [Solanum tuberosum]
Length = 328
Score = 60.5 bits (145), Expect = 2e-07
Identities = 30/36 (83%), Positives = 34/36 (94%)
Frame = +1
Query: 1 GDFMSGTSDRKVTITGSQRAIRLAESMISRKIDSVT 108
GDF+SGTSDRKVTITGSQRAIR AESMIS+KI +V+
Sbjct: 290 GDFLSGTSDRKVTITGSQRAIRTAESMISQKIATVS 325
>ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [Vitis vinifera]
Length = 309
Score = 59.7 bits (143), Expect = 4e-07
Identities = 29/37 (78%), Positives = 33/37 (89%)
Frame = +1
Query: 1 GDFMSGTSDRKVTITGSQRAIRLAESMISRKIDSVTE 111
GDFMSGT+DRKVTITGSQRAIR AESMI +K+ S +E
Sbjct: 272 GDFMSGTTDRKVTITGSQRAIRAAESMIMQKVASASE 308
>emb|CBI31382.3| unnamed protein product [Vitis vinifera]
Length = 357
Score = 59.7 bits (143), Expect = 4e-07
Identities = 29/37 (78%), Positives = 33/37 (89%)
Frame = +1
Query: 1 GDFMSGTSDRKVTITGSQRAIRLAESMISRKIDSVTE 111
GDFMSGT+DRKVTITGSQRAIR AESMI +K+ S +E
Sbjct: 320 GDFMSGTTDRKVTITGSQRAIRAAESMIMQKVASASE 356
>ref|XP_006398902.1| hypothetical protein EUTSA_v10014068mg [Eutrema salsugineum]
gi|557099992|gb|ESQ40355.1| hypothetical protein
EUTSA_v10014068mg [Eutrema salsugineum]
Length = 334
Score = 58.5 bits (140), Expect = 9e-07
Identities = 27/37 (72%), Positives = 34/37 (91%)
Frame = +1
Query: 1 GDFMSGTSDRKVTITGSQRAIRLAESMISRKIDSVTE 111
GDFMSGT+DRKV+ITGSQRAI+ AE+MI +K+DS +E
Sbjct: 294 GDFMSGTTDRKVSITGSQRAIQQAETMIKQKVDSASE 330
>ref|XP_006398901.1| hypothetical protein EUTSA_v10014068mg [Eutrema salsugineum]
gi|567170303|ref|XP_006398903.1| hypothetical protein
EUTSA_v10014068mg [Eutrema salsugineum]
gi|557099991|gb|ESQ40354.1| hypothetical protein
EUTSA_v10014068mg [Eutrema salsugineum]
gi|557099993|gb|ESQ40356.1| hypothetical protein
EUTSA_v10014068mg [Eutrema salsugineum]
Length = 313
Score = 58.5 bits (140), Expect = 9e-07
Identities = 27/37 (72%), Positives = 34/37 (91%)
Frame = +1
Query: 1 GDFMSGTSDRKVTITGSQRAIRLAESMISRKIDSVTE 111
GDFMSGT+DRKV+ITGSQRAI+ AE+MI +K+DS +E
Sbjct: 273 GDFMSGTTDRKVSITGSQRAIQQAETMIKQKVDSASE 309
>ref|NP_850764.1| TOMV RNA binding protein [Arabidopsis thaliana]
gi|332003360|gb|AED90743.1| TOMV RNA binding protein
[Arabidopsis thaliana]
Length = 334
Score = 58.2 bits (139), Expect = 1e-06
Identities = 27/37 (72%), Positives = 33/37 (89%)
Frame = +1
Query: 1 GDFMSGTSDRKVTITGSQRAIRLAESMISRKIDSVTE 111
GDFMSGT+DRKV+ITG QRAI+ AE+MI +K+DS TE
Sbjct: 294 GDFMSGTTDRKVSITGPQRAIQQAETMIKQKVDSATE 330
>ref|XP_002873150.1| hypothetical protein ARALYDRAFT_487225 [Arabidopsis lyrata subsp.
lyrata] gi|297318987|gb|EFH49409.1| hypothetical protein
ARALYDRAFT_487225 [Arabidopsis lyrata subsp. lyrata]
Length = 334
Score = 58.2 bits (139), Expect = 1e-06
Identities = 27/37 (72%), Positives = 33/37 (89%)
Frame = +1
Query: 1 GDFMSGTSDRKVTITGSQRAIRLAESMISRKIDSVTE 111
GDFMSGT+DRKV+ITG QRAI+ AE+MI +K+DS TE
Sbjct: 294 GDFMSGTTDRKVSITGPQRAIQQAETMIKQKVDSATE 330
>dbj|BAH20084.1| AT5G04430 [Arabidopsis thaliana]
Length = 151
Score = 58.2 bits (139), Expect = 1e-06
Identities = 27/37 (72%), Positives = 33/37 (89%)
Frame = +1
Query: 1 GDFMSGTSDRKVTITGSQRAIRLAESMISRKIDSVTE 111
GDFMSGT+DRKV+ITG QRAI+ AE+MI +K+DS TE
Sbjct: 111 GDFMSGTTDRKVSITGPQRAIQQAETMIKQKVDSATE 147
>ref|NP_196063.1| TOMV RNA binding protein [Arabidopsis thaliana]
gi|14030641|gb|AAK52995.1|AF375411_1 AT5g04430/T32M21_30
[Arabidopsis thaliana] gi|7406447|emb|CAB85549.1|
putative RNA-binding protein [Arabidopsis thaliana]
gi|21554568|gb|AAM63617.1| putative RNA-binding protein
[Arabidopsis thaliana] gi|23507775|gb|AAN38691.1|
At5g04430/T32M21_30 [Arabidopsis thaliana]
gi|332003361|gb|AED90744.1| TOMV RNA binding protein
[Arabidopsis thaliana]
Length = 313
Score = 58.2 bits (139), Expect = 1e-06
Identities = 27/37 (72%), Positives = 33/37 (89%)
Frame = +1
Query: 1 GDFMSGTSDRKVTITGSQRAIRLAESMISRKIDSVTE 111
GDFMSGT+DRKV+ITG QRAI+ AE+MI +K+DS TE
Sbjct: 273 GDFMSGTTDRKVSITGPQRAIQQAETMIKQKVDSATE 309
>gb|EOY18878.1| Binding to TOMV RNA 1L (long form) isoform 6 [Theobroma cacao]
Length = 314
Score = 57.4 bits (137), Expect = 2e-06
Identities = 28/37 (75%), Positives = 32/37 (86%)
Frame = +1
Query: 1 GDFMSGTSDRKVTITGSQRAIRLAESMISRKIDSVTE 111
GDFMSGT+DRKVTITGSQRAIR AESMI +K+ T+
Sbjct: 274 GDFMSGTTDRKVTITGSQRAIRQAESMIMQKVAYATD 310
>gb|EOY18874.1| Binding to TOMV RNA 1L isoform 2 [Theobroma cacao]
Length = 334
Score = 57.4 bits (137), Expect = 2e-06
Identities = 28/37 (75%), Positives = 32/37 (86%)
Frame = +1
Query: 1 GDFMSGTSDRKVTITGSQRAIRLAESMISRKIDSVTE 111
GDFMSGT+DRKVTITGSQRAIR AESMI +K+ T+
Sbjct: 294 GDFMSGTTDRKVTITGSQRAIRQAESMIMQKVAYATD 330
>gb|EOY18873.1| Binding to TOMV RNA 1L (long form) isoform 1 [Theobroma cacao]
gi|508726978|gb|EOY18875.1| Binding to TOMV RNA 1L (long
form) isoform 1 [Theobroma cacao]
gi|508726979|gb|EOY18876.1| Binding to TOMV RNA 1L (long
form) isoform 1 [Theobroma cacao]
Length = 313
Score = 57.4 bits (137), Expect = 2e-06
Identities = 28/37 (75%), Positives = 32/37 (86%)
Frame = +1
Query: 1 GDFMSGTSDRKVTITGSQRAIRLAESMISRKIDSVTE 111
GDFMSGT+DRKVTITGSQRAIR AESMI +K+ T+
Sbjct: 273 GDFMSGTTDRKVTITGSQRAIRQAESMIMQKVAYATD 309
>ref|XP_004142445.1| PREDICTED: RNA-binding protein Nova-2-like [Cucumis sativus]
gi|449527683|ref|XP_004170839.1| PREDICTED: RNA-binding
protein Nova-2-like [Cucumis sativus]
Length = 326
Score = 57.0 bits (136), Expect = 3e-06
Identities = 28/37 (75%), Positives = 32/37 (86%)
Frame = +1
Query: 1 GDFMSGTSDRKVTITGSQRAIRLAESMISRKIDSVTE 111
GDFMSGT+DRKVTITGSQRAIR AESMI +K+ +E
Sbjct: 285 GDFMSGTTDRKVTITGSQRAIRAAESMILQKVAYASE 321
>ref|XP_006378792.1| hypothetical protein POPTR_0010s23710g [Populus trichocarpa]
gi|550330463|gb|ERP56589.1| hypothetical protein
POPTR_0010s23710g [Populus trichocarpa]
Length = 313
Score = 56.2 bits (134), Expect = 4e-06
Identities = 26/37 (70%), Positives = 31/37 (83%)
Frame = +1
Query: 1 GDFMSGTSDRKVTITGSQRAIRLAESMISRKIDSVTE 111
GDFMSGT+DRK+TITGSQRAIR AE MI +K+ +E
Sbjct: 273 GDFMSGTTDRKITITGSQRAIRAAEDMIMQKVSYASE 309
>ref|XP_004496142.1| PREDICTED: RNA-binding protein Nova-2-like isoform X2 [Cicer
arietinum]
Length = 315
Score = 56.2 bits (134), Expect = 4e-06
Identities = 27/37 (72%), Positives = 32/37 (86%)
Frame = +1
Query: 1 GDFMSGTSDRKVTITGSQRAIRLAESMISRKIDSVTE 111
GD++SGT+DRKVTITGSQRAIR AESMI +K+ TE
Sbjct: 275 GDYISGTTDRKVTITGSQRAIRTAESMIMQKVAYATE 311
>ref|XP_004496141.1| PREDICTED: RNA-binding protein Nova-2-like isoform X1 [Cicer
arietinum]
Length = 337
Score = 56.2 bits (134), Expect = 4e-06
Identities = 27/37 (72%), Positives = 32/37 (86%)
Frame = +1
Query: 1 GDFMSGTSDRKVTITGSQRAIRLAESMISRKIDSVTE 111
GD++SGT+DRKVTITGSQRAIR AESMI +K+ TE
Sbjct: 297 GDYISGTTDRKVTITGSQRAIRTAESMIMQKVAYATE 333