BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00020802
         (2368 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006338151.1| PREDICTED: CRS2-associated factor 1, chlorop...   760   0.0  
ref|XP_004239268.1| PREDICTED: CRS2-associated factor 1, chlorop...   750   0.0  
gb|EMJ04984.1| hypothetical protein PRUPE_ppa001872mg [Prunus pe...   677   0.0  
ref|XP_002280611.1| PREDICTED: CRS2-associated factor 1, chlorop...   667   0.0  
emb|CBI28022.3| unnamed protein product [Vitis vinifera]              666   0.0  
gb|EOY30694.1| RNA-binding CRS1 / YhbY domain-containing protein...   658   0.0  
ref|XP_004287455.1| PREDICTED: CRS2-associated factor 1, chlorop...   645   0.0  
ref|XP_002332503.1| predicted protein [Populus trichocarpa]           643   0.0  
gb|EXB59798.1| CRS2-associated factor 1 [Morus notabilis]             642   0.0  
ref|XP_006389456.1| hypothetical protein POPTR_0024s00430g [Popu...   641   0.0  
ref|XP_002535109.1| conserved hypothetical protein [Ricinus comm...   632   e-178
ref|XP_004139352.1| PREDICTED: CRS2-associated factor 1, chlorop...   619   e-174
ref|NP_565462.1| CRS2-associated factor 1 [Arabidopsis thaliana]...   614   e-173
ref|XP_002886005.1| hypothetical protein ARALYDRAFT_480467 [Arab...   614   e-173
ref|XP_006408916.1| hypothetical protein EUTSA_v10001924mg [Eutr...   608   e-171
ref|XP_006297110.1| hypothetical protein CARUB_v10013113mg [Caps...   598   e-168
ref|XP_004503464.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associa...   594   e-167
ref|XP_003630745.1| CRS2-associated factor [Medicago truncatula]...   590   e-166
ref|XP_006494323.1| PREDICTED: CRS2-associated factor 1, chlorop...   574   e-161
ref|XP_006451251.1| hypothetical protein CICLE_v100106541mg, par...   574   e-161

>ref|XP_006338151.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Solanum
            tuberosum]
          Length = 764

 Score =  760 bits (1962), Expect = 0.0
 Identities = 415/756 (54%), Positives = 500/756 (66%), Gaps = 45/756 (5%)
 Frame = -3

Query: 2240 THRLPTEIRFSRWNNANAQKFIRHDRNQKELEDQIRIEKRFDSALTIAHNYNPAPPHPTT 2061
            +HR  TEIRFSRWNNANA+KFIRH+R QKE+ED+IR  KRFDS L IA+NYNPAPP P T
Sbjct: 20   SHRPATEIRFSRWNNANAEKFIRHERTQKEIEDEIRFHKRFDSVLNIANNYNPAPPSPVT 79

Query: 2060 FXXXXXXXXXXXXXXXXXXXXXXKTPSRKT------------LHPAFKPLPRPRKIP-VN 1920
                                     P +K+            +HPAFKPL R RKIP   
Sbjct: 80   -------EKTFKSVGTPSTPSSPSIPGKKSKYSRNFQNNPRQIHPAFKPLVRTRKIPDET 132

Query: 1919 ENETEKSSGLNFRIDENGVSYEIPEAPFVYQYSYTETPKVKPVKLREPLVSPFGPGTMAK 1740
             +ET + S ++ ++DENGV YE PEAPFVYQYSYTETPK+KP KLREPLVSPFGP +M +
Sbjct: 133  ADETARKSAIDIKVDENGVCYEFPEAPFVYQYSYTETPKLKPKKLREPLVSPFGPESMQR 192

Query: 1739 PWLGRXXXXXXXXXXPEFDSFQLPPPHKKGVKPVQAPGPFLPGSGPKYVRSREEVLGTPL 1560
            PW GR          PEFDSFQLPPPHKKGVKPVQAPGPFL GSGPKYV+SREEVLG PL
Sbjct: 193  PWTGRKPLPPSKKKRPEFDSFQLPPPHKKGVKPVQAPGPFLAGSGPKYVKSREEVLGEPL 252

Query: 1559 TKEEIEELIKGSKKSNRQLNMGRDGLTHNMLDNIHALWKRRRVCKIKCKGVCTVDMDNVC 1380
            TKEE+ ELI   KK+ RQ+N+GRDGLTHNML+NIHA WKR+RVCKIKCKGVCTVDMDNVC
Sbjct: 253  TKEEMMELINSCKKTTRQMNIGRDGLTHNMLENIHAHWKRKRVCKIKCKGVCTVDMDNVC 312

Query: 1379 QQLEEKTGGKIIYNRGGVIYLFRGRNYNYKSRPRFPLMLWKPVTPVYPRLIQRVPEGLTL 1200
            ++LEEKTGGKIIY++GG+IYLFRGRNYNYK+RPRFPLMLW+PVTPVYPRL+QRVPEGLTL
Sbjct: 313  EKLEEKTGGKIIYHKGGLIYLFRGRNYNYKTRPRFPLMLWRPVTPVYPRLVQRVPEGLTL 372

Query: 1199 EEANDMRKRGSYLTPICKLAKNGVYCDLVKNVREAFEACELVRINCQGLNPSDYKKIGAK 1020
            EEA  MRK+G  L PICKLAKNGVYCDLVKNVREAFEACELV INCQGLNPSDY+KIGAK
Sbjct: 373  EEATLMRKKGRNLIPICKLAKNGVYCDLVKNVREAFEACELVSINCQGLNPSDYRKIGAK 432

Query: 1019 LKDLVPCVLLSFECEHILVWRGRDWQSLLEPDESLKGLQEVKDDDVAXXXXXXXXXXXXX 840
            LKDLVPCVL+SFE EHIL+WRGRDW S L  D      +    +                
Sbjct: 433  LKDLVPCVLISFEQEHILMWRGRDWVSSLPEDRDNDSDKAANTNRSLEVQVVASTSGSPR 492

Query: 839  LCIMEDKPNDLEISLSPTYSNEESQGNSEYT-EVEAED-IIAKVPDAPVIASHAVLNGDG 666
            L I E    +L  +  P    E      + T E  +ED  +     AP+        G  
Sbjct: 493  LPITEMNTCNLSANTFPLGEEESEYVRRDGTKEDRSEDHYLESSNKAPLDVCSVTTTG-- 550

Query: 665  IIDESEKSPVFPGSFYGDPSEAFN-----QTVGNDATLENTERAATVLNYTKNADEEMNL 501
             I ESE   V+ G   GD S   +     +T  +D+ ++      +  +  +N  +  +L
Sbjct: 551  -ISESEIPLVYAGD-TGDNSRILSDCRECKTRLDDSVVDTENELESASDDVENKFDSSSL 608

Query: 500  -----------------------SSVPCTEGILLLREQAVENGMALVLDDHNLDADTVFK 390
                                   S  PCTEGILLL +QA+E+G A++LDD ++DAD V++
Sbjct: 609  VPLTGYKVHSLTVDTNQNCQLVSSITPCTEGILLLWKQAIESGSAVLLDDSSIDADIVYQ 668

Query: 389  KSVDFAKTAPTGPVFSLQRKQLAVQKNKEQERDD-NSGSKEKEAGAALGTEVTVPGRR-N 216
            ++V  + +AP GPVF  Q K+++VQ+  E+E  D   G  + +  A+   E  V GR+ N
Sbjct: 669  RAVALSTSAPAGPVFQHQPKKVSVQRRGEEEIGDLEVGCTKLDTPASSRKETAVSGRKVN 728

Query: 215  ERKTSRNEKLKDIKADYLNVVPQGNLRIDELAKLLA 108
               ++R EKLK I+ DYLNVVP+G+L +DELAKLLA
Sbjct: 729  STTSTRKEKLKGIREDYLNVVPKGSLGVDELAKLLA 764


>ref|XP_004239268.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Solanum
            lycopersicum]
          Length = 766

 Score =  750 bits (1936), Expect = 0.0
 Identities = 407/749 (54%), Positives = 498/749 (66%), Gaps = 38/749 (5%)
 Frame = -3

Query: 2240 THRLPTEIRFSRWNNANAQKFIRHDRNQKELEDQIRIEKRFDSALTIAHNYNPAPPHPT- 2064
            +HR  TEIRFSRWNNANA+KFIRH+R QKE+ED+IR  KRFDS L+IA+NYNPAPP P  
Sbjct: 20   SHRPATEIRFSRWNNANAEKFIRHERTQKEIEDEIRFHKRFDSVLSIANNYNPAPPSPVA 79

Query: 2063 --TFXXXXXXXXXXXXXXXXXXXXXXKT--PSRKTLHPAFKPLPRPRKIPVNE-NETEKS 1899
              TF                      +    + + +HPAFKPL R RKIPV   +ET   
Sbjct: 80   EKTFKSTGTPSTPSSPSIPGKKSKYSRNFHNNPRQIHPAFKPLVRTRKIPVETPDETAGK 139

Query: 1898 SGLNFRIDENGVSYEIPEAPFVYQYSYTETPKVKPVKLREPLVSPFGPGTMAKPWLGRXX 1719
            S ++ ++DENGV YE PEAPFVYQYSYTETPKVKP KLREPLVSPFGP +M +PW GR  
Sbjct: 140  SDIDIKVDENGVCYEFPEAPFVYQYSYTETPKVKPRKLREPLVSPFGPESMQRPWTGRKP 199

Query: 1718 XXXXXXXXPEFDSFQLPPPHKKGVKPVQAPGPFLPGSGPKYVRSREEVLGTPLTKEEIEE 1539
                    PEFDSFQLPPPHKKGVKPVQAPGPFL GSGPKYV+SREEVLG PLTKEE+ E
Sbjct: 200  LPPSKKKLPEFDSFQLPPPHKKGVKPVQAPGPFLAGSGPKYVKSREEVLGEPLTKEEMME 259

Query: 1538 LIKGSKKSNRQLNMGRDGLTHNMLDNIHALWKRRRVCKIKCKGVCTVDMDNVCQQLEEKT 1359
            LI   KK+ RQ+N+GRDGLTHNML+NIHA WKR+RVCKIKCKGVCTVDMDNVC++LEEKT
Sbjct: 260  LINSCKKTTRQMNIGRDGLTHNMLENIHAHWKRKRVCKIKCKGVCTVDMDNVCEKLEEKT 319

Query: 1358 GGKIIYNRGGVIYLFRGRNYNYKSRPRFPLMLWKPVTPVYPRLIQRVPEGLTLEEANDMR 1179
            GGKIIY++GGVIYLFRGRNYNY +RPRFPLMLW+PVTPVYPRL++RVPEGLTLEEA +MR
Sbjct: 320  GGKIIYHKGGVIYLFRGRNYNYMTRPRFPLMLWRPVTPVYPRLVRRVPEGLTLEEATEMR 379

Query: 1178 KRGSYLTPICKLAKNGVYCDLVKNVREAFEACELVRINCQGLNPSDYKKIGAKLKDLVPC 999
            K+G  L PICKLAKNGVYCDLVKNVREAFEACELV INCQGLNPSDY+KIGAKLKDLVPC
Sbjct: 380  KKGRNLIPICKLAKNGVYCDLVKNVREAFEACELVCINCQGLNPSDYRKIGAKLKDLVPC 439

Query: 998  VLLSFECEHILVWRGRDWQSLLEPDESLKGLQEVKDDDVAXXXXXXXXXXXXXLCIMEDK 819
            VL+SFE EHIL+WRGRDW S L  D     ++E  +   A                    
Sbjct: 440  VLISFEQEHILIWRGRDWVSSLPEDGDNPEIREGSESVNAANTNRSFEVQVVASTAGSSS 499

Query: 818  PNDLEISLSPTYSNEESQG--NSEYTEVEAEDIIAKVPDAPVIASHAVLNGDGIIDESEK 645
                E++     +N    G  ++EY   +           P  ++   +   G I +SE 
Sbjct: 500  LPVTEVNTYNLSANTFPLGDEDAEYVRKDGTKEDRSEDHYPESSNKVSVTTTG-ISKSEI 558

Query: 644  SPVFPGSFYGDPSEAFN-----QTVGNDATLENTERAATVLNYTKNADEEMNL------- 501
              V+ G   GD S   +     +T  +D+ ++      +  +  +N  +  +L       
Sbjct: 559  PLVYAGD-TGDNSRILSDCRECKTRSDDSVVDKESEFESASDDVENKFDSSSLVPLTGYK 617

Query: 500  ----------------SSVPCTEGILLLREQAVENGMALVLDDHNLDADTVFKKSVDFAK 369
                            S  PCTEGILLL +QA+E+G A+VL+D ++DAD V++++V  + 
Sbjct: 618  VHSLTVDTNQNCQLVSSITPCTEGILLLWKQAIESGSAVVLNDSSIDADIVYQRAVALST 677

Query: 368  TAPTGPVFSLQRKQLAVQKNKEQERDD-NSGSKEKEAGAALGTEVTVPGRR-NERKTSRN 195
            + P GPVF  Q K+++VQ+  E+E  D   G  + +  A+   E  V  R+ N   ++R 
Sbjct: 678  SVPPGPVFQHQPKKVSVQRRGEEEIGDLEVGCTKLDTPASSRKETVVSSRKVNSTTSTRK 737

Query: 194  EKLKDIKADYLNVVPQGNLRIDELAKLLA 108
            EK K I+ DYLNVVP+G+L +DELAKLLA
Sbjct: 738  EKKKGIRKDYLNVVPKGSLGVDELAKLLA 766


>gb|EMJ04984.1| hypothetical protein PRUPE_ppa001872mg [Prunus persica]
          Length = 750

 Score =  677 bits (1747), Expect = 0.0
 Identities = 376/737 (51%), Positives = 475/737 (64%), Gaps = 27/737 (3%)
 Frame = -3

Query: 2237 HRLPTEIRFSRWNNANAQKFIRHDRNQKELEDQIRIEKRFDSALTIAHNYNPAPPHPTT- 2061
            +R PTE+RF+RWNNANA+KF    R Q+E+ED IR E+RFDSA  IA  Y+ A    TT 
Sbjct: 27   NRPPTEVRFARWNNANAEKFNERRRAQQEIEDDIRRERRFDSATRIATIYDSATDTTTTS 86

Query: 2060 --FXXXXXXXXXXXXXXXXXXXXXXKTPSRKTLHPAFKPLPRPRK---IPVNENETEKSS 1896
              F                      K P+ K  HPAF+ + RP K   IP ++  T    
Sbjct: 87   ETFKSVGTPSFPSSPSIPGKKSKYSKNPNPKESHPAFRRIIRPTKLSKIPKDKGPTVDRK 146

Query: 1895 GLNFRIDENGVSYEIPEAPFVYQYSYTETPKVKPVKLREPLVSPFGPGTMAKPWLGRXXX 1716
              N  + ++G+SY I  APF ++YSYTETPKVKP+KLREP  +PFGP TMA+PW GR   
Sbjct: 147  A-NISVGDDGLSYVIDGAPFEFKYSYTETPKVKPLKLREPAYAPFGPTTMARPWTGRAPL 205

Query: 1715 XXXXXXXPEFDSFQLPPPHKKGVKPVQAPGPFLPGSGPKYVRSREEVLGTPLTKEEIEEL 1536
                    EFDSFQLPPPHKKGVKPVQ+PGP+LPGSGPKYV+SR+E+LG PLT EE++EL
Sbjct: 206  PPSKKKLKEFDSFQLPPPHKKGVKPVQSPGPYLPGSGPKYVKSRDEILGDPLTPEEVKEL 265

Query: 1535 IKGSKKSNRQLNMGRDGLTHNMLDNIHALWKRRRVCKIKCKGVCTVDMDNVCQQLEEKTG 1356
            +KG  K+ RQLNMGRDG THNMLDNIHA WKRRRVCKIKCKGVCTVDMDNVC+Q+EEKTG
Sbjct: 266  VKGCIKTRRQLNMGRDGFTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVCEQIEEKTG 325

Query: 1355 GKIIYNRGGVIYLFRGRNYNYKSRPRFPLMLWKPVTPVYPRLIQRVPEGLTLEEANDMRK 1176
            GKIIY +GGVIYLFRGRNYNYK+RP+FPLMLW+P+TPVYPRL+QR PEGLTLEEA +MRK
Sbjct: 326  GKIIYRKGGVIYLFRGRNYNYKTRPQFPLMLWRPITPVYPRLVQRAPEGLTLEEATEMRK 385

Query: 1175 RGSYLTPICKLAKNGVYCDLVKNVREAFEACELVRINCQGLNPSDYKKIGAKLKDLVPCV 996
            +G  L PICKL KNGVY +L KN REAFE CELVRINC G+N SDY+KIGAKLKDLVPCV
Sbjct: 386  KGRNLIPICKLGKNGVYSELAKNAREAFEECELVRINCTGMNGSDYRKIGAKLKDLVPCV 445

Query: 995  LLSFECEHILVWRGRDWQSLLE-PDESLKGLQEVKDDDVAXXXXXXXXXXXXXLCIMEDK 819
            L+SFE EHIL+WRGR+W+S +  P+  LK ++    DD                C     
Sbjct: 446  LISFELEHILMWRGREWKSSIPYPENDLKEVKGSDVDDSTSIAPPLEGQEESTSCASTVS 505

Query: 818  PNDLEISL----SPTYSNE----ESQGN---SEYTEVEAE-DIIAKVPDAPVIASHAVLN 675
              D  + +    +P+  +E    E  G+   S+Y E  A  D ++ V    V  + + + 
Sbjct: 506  VKDASLEILNTSTPSIGSEVVGAEESGDLSPSQYVEPCATVDGVSAVGGTHVTETISDVE 565

Query: 674  GD---GIIDESEKSPVFPGSFYGDPSEAFNQTVGNDATLENTERAATVLNYTKNADEEMN 504
             D    I+D S    +   +       +     G   + EN + A+     ++N  E   
Sbjct: 566  DDESKAILDPSGIDRILDNTGCAADEASPTTVTGGPRSNENPQCASV---SSENLSEPAR 622

Query: 503  LSSVPCTEGILLLREQAVENGMALVLDDHNLDADTVFKKSVDFAKTAPTGPVFSLQR-KQ 327
             SS PC E +LLL  +AV +G AL+LDD  LDAD +F+++V  A++AP GPVF   R K+
Sbjct: 623  -SSGPCMENVLLLLNEAVGSGSALILDDSALDADIIFQRAVALAQSAPPGPVFKHHRPKK 681

Query: 326  LAVQKNKEQERDDNSGSKEKEAGAALGTEVTVPGRRN----ERKTSRNEKLKDIKADYLN 159
            +AVQK  +  + + S S+ K        E+TVP +R     + K ++ ++ +D      N
Sbjct: 682  VAVQKRIKIMKQEASVSEVK--------EITVPVKRGSEKIQMKDTKVKRTRDFGESLDN 733

Query: 158  VVPQGNLRIDELAKLLA 108
            VVPQG+LR+DELAKLLA
Sbjct: 734  VVPQGSLRVDELAKLLA 750


>ref|XP_002280611.1| PREDICTED: CRS2-associated factor 1, chloroplastic [Vitis vinifera]
          Length = 752

 Score =  667 bits (1721), Expect = 0.0
 Identities = 379/748 (50%), Positives = 466/748 (62%), Gaps = 37/748 (4%)
 Frame = -3

Query: 2240 THRLPTEIRFSRWNNANAQKFIRHDRNQKELEDQIRIEKRFDSALTIAH--NYNPAPPHP 2067
            +HR  +E+RFSRWNNANA++F   +R QKE+ED IR E+RFDSA  IA   +   +    
Sbjct: 18   SHRPASEVRFSRWNNANAERFTLRERAQKEIEDNIRRERRFDSATRIADIDDAGTSKEAA 77

Query: 2066 TTFXXXXXXXXXXXXXXXXXXXXXXKTPSRKTLHPAFKPLPRPRKIPVNENETEKSSGLN 1887
                                      + + KT HPAF+ + R  K+P      E   G++
Sbjct: 78   AAGTFKSTGTPSSPSKPSIPGKSSKYSKNSKTSHPAFRQISRRTKLPGPNISPEAKRGIS 137

Query: 1886 FRIDENGVSYEIPEAPFVYQYSYTETPKVKPVKLREPLVSPFGPGTMAKPWLGRXXXXXX 1707
              I E+GVSY +P  PF  +YSYTETPKVKP+ LREP   PFGP TM +PW GR      
Sbjct: 138  --IGEDGVSYMVPGVPFELRYSYTETPKVKPIALREPPFLPFGPDTMPRPWTGRAPLPPS 195

Query: 1706 XXXXPEFDSFQLPPPHKKGVKPVQAPGPFLPGSGPKYVRSREEVLGTPLTKEEIEELIKG 1527
                 EFDSFQLPPP KK VKPVQAPGPFLPGSGP+YVRSREE+LG PLT+EEI+EL++G
Sbjct: 196  KKKLKEFDSFQLPPPGKKRVKPVQAPGPFLPGSGPRYVRSREEILGEPLTEEEIKELVQG 255

Query: 1526 SKKSNRQLNMGRDGLTHNMLDNIHALWKRRRVCKIKCKGVCTVDMDNVCQQLEEKTGGKI 1347
              KS RQLNMGRDGLTHNMLDNIHA WKRRRVCKIKCKGVCTVDMDNV QQLEEKTGGK+
Sbjct: 256  CVKSKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVRQQLEEKTGGKV 315

Query: 1346 IYNRGGVIYLFRGRNYNYKSRPRFPLMLWKPVTPVYPRLIQRVPEGLTLEEANDMRKRGS 1167
            IY +GGV++LFRGRNYNY++RPRFPLMLWKPVTPVYPRL+QR PEGLTLEEA  MRK+G 
Sbjct: 316  IYGKGGVLFLFRGRNYNYRNRPRFPLMLWKPVTPVYPRLVQRAPEGLTLEEAGAMRKKGR 375

Query: 1166 YLTPICKLAKNGVYCDLVKNVREAFEACELVRINCQGLNPSDYKKIGAKLKDLVPCVLLS 987
             L PICKLAKNGVY DLV NVREAFE CELVRINCQGLN SDY+KIGAKLKDLVPCVL+S
Sbjct: 376  KLIPICKLAKNGVYTDLVNNVREAFEECELVRINCQGLNASDYRKIGAKLKDLVPCVLIS 435

Query: 986  FECEHILVWRGRDWQSLL-EPDESLKGLQEVKDDDVAXXXXXXXXXXXXXLCIMEDKPND 810
            FE EHIL+WRG DW+ L  +P++  K  +E  ++  A              C  +    D
Sbjct: 436  FEHEHILMWRGSDWKFLHPKPEDGCKEAKESDNNSEASIPPPFEGQELSASCSSKISVKD 495

Query: 809  LEISL-----SPTYSNEESQGNSEYTEVEAEDIIA-KVPDAPVIASHAV---LNGDGIID 657
              + +     SP  + + +   +E    +  DI++ +  D P  A+  V    N D + D
Sbjct: 496  TSLDMLDTIASPVINEDVAMDKTEDLSSKGNDILSFEGNDKPFAATQLVKTAYNWDTVSD 555

Query: 656  ------ESEKSPVFPGSFYGDPSEAFNQTVGNDATLENTERAATVLN-YTKNADE----- 513
                  ESE       + +    E+    V  D  LEN      +++  T + D+     
Sbjct: 556  DTGGTNESEIILTKLDNAHHADDESAAMPVELDTMLENGSIKNELMDAVTHDMDKLQDIP 615

Query: 512  -------EMNLSSVPCTEGILLLREQAVENGMALVLDDHNLDADTVFKKSVDFAKTAPTG 354
                   +M  SS PCT G+LLL +QAV++G A+VLD  + DAD V+ K+V F+K AP G
Sbjct: 616  KASQDCGKMTGSSAPCTGGLLLLLKQAVDSGSAVVLDGDSCDADIVYGKTVAFSKDAPPG 675

Query: 353  PVFSLQRKQLAVQKNKEQERDDNSGSKEKEAGAALGTEVTVPGR-RNERKTSRNEKLKDI 177
            PVF   RK    +  KE+ RD             +G  VT P + R++ K+SRN+  KD 
Sbjct: 676  PVFRRPRKAAVQKCEKEEPRD-----------LVVGKIVTAPEKGRSQSKSSRNQIAKDF 724

Query: 176  K-----ADYLNVVPQGNLRIDELAKLLA 108
            K      DY  V  +G L +DELAKLLA
Sbjct: 725  KEGYLDVDYPGVGTRGTLGVDELAKLLA 752


>emb|CBI28022.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  666 bits (1718), Expect = 0.0
 Identities = 371/729 (50%), Positives = 457/729 (62%), Gaps = 18/729 (2%)
 Frame = -3

Query: 2240 THRLPTEIRFSRWNNANAQKFIRHDRNQKELEDQIRIEKRFDSALTIAH--NYNPAPPHP 2067
            +HR  +E+RFSRWNNANA++F   +R QKE+ED IR E+RFDSA  IA   +   +    
Sbjct: 18   SHRPASEVRFSRWNNANAERFTLRERAQKEIEDNIRRERRFDSATRIADIDDAGTSKEAA 77

Query: 2066 TTFXXXXXXXXXXXXXXXXXXXXXXKTPSRKTLHPAFKPLPRPRKIPVNENETEKSSGLN 1887
                                      + + KT HPAF+ + R  K+P      E   G++
Sbjct: 78   AAGTFKSTGTPSSPSKPSIPGKSSKYSKNSKTSHPAFRQISRRTKLPGPNISPEAKRGIS 137

Query: 1886 FRIDENGVSYEIPEAPFVYQYSYTETPKVKPVKLREPLVSPFGPGTMAKPWLGRXXXXXX 1707
              I E+GVSY +P  PF  +YSYTETPKVKP+ LREP   PFGP TM +PW GR      
Sbjct: 138  --IGEDGVSYMVPGVPFELRYSYTETPKVKPIALREPPFLPFGPDTMPRPWTGRAPLPPS 195

Query: 1706 XXXXPEFDSFQLPPPHKKGVKPVQAPGPFLPGSGPKYVRSREEVLGTPLTKEEIEELIKG 1527
                 EFDSFQLPPP KK VKPVQAPGPFLPGSGP+YVRSREE+LG PLT+EEI+EL++G
Sbjct: 196  KKKLKEFDSFQLPPPGKKRVKPVQAPGPFLPGSGPRYVRSREEILGEPLTEEEIKELVQG 255

Query: 1526 SKKSNRQLNMGRDGLTHNMLDNIHALWKRRRVCKIKCKGVCTVDMDNVCQQLEEKTGGKI 1347
              KS RQLNMGRDGLTHNMLDNIHA WKRRRVCKIKCKGVCTVDMDNV QQLEEKTGGK+
Sbjct: 256  CVKSKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVRQQLEEKTGGKV 315

Query: 1346 IYNRGGVIYLFRGRNYNYKSRPRFPLMLWKPVTPVYPRLIQRVPEGLTLEEANDMRKRGS 1167
            IY +GGV++LFRGRNYNY++RPRFPLMLWKPVTPVYPRL+QR PEGLTLEEA  MRK+G 
Sbjct: 316  IYGKGGVLFLFRGRNYNYRNRPRFPLMLWKPVTPVYPRLVQRAPEGLTLEEAGAMRKKGR 375

Query: 1166 YLTPICKLAKNGVYCDLVKNVREAFEACELVRINCQGLNPSDYKKIGAKLKDLVPCVLLS 987
             L PICKLAKNGVY DLV NVREAFE CELVRINCQGLN SDY+KIGAKLKDLVPCVL+S
Sbjct: 376  KLIPICKLAKNGVYTDLVNNVREAFEECELVRINCQGLNASDYRKIGAKLKDLVPCVLIS 435

Query: 986  FECEHILVWRGRDWQSL-LEPDESLKGLQEVKDDDVAXXXXXXXXXXXXXLCIMEDKPND 810
            FE EHIL+WRG DW+ L  +P++  K  +E  ++  A              C  +    D
Sbjct: 436  FEHEHILMWRGSDWKFLHPKPEDGCKEAKESDNNSEASIPPPFEGQELSASCSSKISVKD 495

Query: 809  LEISL-----SPTYSNEESQGNSEYTEVEAEDIIA-KVPDAPVIASHAV---LNGDGIID 657
              + +     SP  + + +   +E    +  DI++ +  D P  A+  V    N D + D
Sbjct: 496  TSLDMLDTIASPVINEDVAMDKTEDLSSKGNDILSFEGNDKPFAATQLVKTAYNWDTVSD 555

Query: 656  ESEKSPVFPGSFYGDPSEAFNQTVGNDATLENTERAATVLNYTKNADEEMNLSSVPCTEG 477
            ++           G        T  ++A   + E AA  +      +     +  PCT G
Sbjct: 556  DTG----------GTNESEIILTKLDNAHHADDESAAMPVELDTMLENGSIKNDAPCTGG 605

Query: 476  ILLLREQAVENGMALVLDDHNLDADTVFKKSVDFAKTAPTGPVFSLQRKQLAVQKNKEQE 297
            +LLL +QAV++G A+VLD  + DAD V+ K+V F+K AP GPVF   RK    +  KE+ 
Sbjct: 606  LLLLLKQAVDSGSAVVLDGDSCDADIVYGKTVAFSKDAPPGPVFRRPRKAAVQKCEKEEP 665

Query: 296  RDDNSGSKEKEAGAALGTEVTVPGR-RNERKTSRNEKLKDIK-----ADYLNVVPQGNLR 135
            RD             +G  VT P + R++ K+SRN+  KD K      DY  V  +G L 
Sbjct: 666  RD-----------LVVGKIVTAPEKGRSQSKSSRNQIAKDFKEGYLDVDYPGVGTRGTLG 714

Query: 134  IDELAKLLA 108
            +DELAKLLA
Sbjct: 715  VDELAKLLA 723


>gb|EOY30694.1| RNA-binding CRS1 / YhbY domain-containing protein, putative
            [Theobroma cacao]
          Length = 767

 Score =  658 bits (1698), Expect = 0.0
 Identities = 367/764 (48%), Positives = 477/764 (62%), Gaps = 54/764 (7%)
 Frame = -3

Query: 2237 HRLPTEIRFSRWNNANAQKFIRHDRNQKELEDQIRIEKRFDSALTIAHNYNP--APPHPT 2064
            HR PTEIRFSRWNNANA+KF +  R Q+E+ED IR  +RFDSA  IA   +P  A P PT
Sbjct: 28   HRPPTEIRFSRWNNANAEKFNQRQRAQQEIEDDIRRYRRFDSATKIAITIDPSSASPRPT 87

Query: 2063 TFXXXXXXXXXXXXXXXXXXXXXXKTPSRKTLHPAFKPLPRPRKIPVNENETEKSSGLNF 1884
                                      P     HPAF+   +    P      +K +  N 
Sbjct: 88   ETYKSLGSPSSPSNPSIPGKKSKYSKPPN---HPAFRKFSKTANPPPPTPLDKKPA--NV 142

Query: 1883 RIDENGVSYEIPEAPFVYQYSYTETPKVKPVKLREPLVSPFGPGTMAKPWLGRXXXXXXX 1704
             I ++G+S+ I  APF ++YSYTETPKVKP+KLREP  SPFGP TM +PW GR       
Sbjct: 143  SIGDDGISFVIDGAPFEFKYSYTETPKVKPIKLREPPYSPFGPSTMPRPWTGRAPLPPSK 202

Query: 1703 XXXPEFDSFQLPPPHKKGVKPVQAPGPFLPGSGPKYVRSREEVLGTPLTKEEIEELIKGS 1524
                EFDSF LPPP+KKGVKP+Q PGP+LPG+GP+YV+SREE+LG PL  EE++EL+ G 
Sbjct: 203  KKMKEFDSFVLPPPNKKGVKPIQKPGPYLPGTGPRYVQSREEILGEPLNAEEVKELVNGC 262

Query: 1523 KKSNRQLNMGRDGLTHNMLDNIHALWKRRRVCKIKCKGVCTVDMDNVCQQLEEKTGGKII 1344
             KS RQLNMGRDGLTHNMLDNIHA WKRRRVCKIKCKGVCTVDMDNVC+QLEE+TGGK+I
Sbjct: 263  LKSKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVCEQLEERTGGKVI 322

Query: 1343 YNRGGVIYLFRGRNYNYKSRPRFPLMLWKPVTPVYPRLIQRVPEGLTLEEANDMRKRGSY 1164
            Y RGGV++LFRGRNYNYK+RPRFPLMLWKPVTP+YPRLIQ+ PEGLT+EE ++MRK+G  
Sbjct: 323  YRRGGVLFLFRGRNYNYKTRPRFPLMLWKPVTPMYPRLIQKAPEGLTVEEMSEMRKKGRK 382

Query: 1163 LTPICKLAKNGVYCDLVKNVREAFEACELVRINCQGLNPSDYKKIGAKLKDLVPCVLLSF 984
            L PICKLAKNGVY DLVKNVREAFE CELVR+NC+G+  SDY+KIGAKLK+LVPCVL+SF
Sbjct: 383  LMPICKLAKNGVYSDLVKNVREAFEECELVRVNCEGIKGSDYRKIGAKLKELVPCVLISF 442

Query: 983  ECEHILVWRGRDWQSLLEPDESLKGLQEVKDDDVAXXXXXXXXXXXXXLCIM-------- 828
            E E IL+WRGR+W+S         G++E   ++               +C+         
Sbjct: 443  ENESILMWRGRNWKSSFLKPAFNSGVEERDAENATSILGQLEGQELSPVCVQAGYTDQPL 502

Query: 827  ----------------EDKPN-----------DLEISLSP-TYSNEESQ----------- 765
                            +D+PN            +E +L    Y+N+ES+           
Sbjct: 503  MISQEISIEQRESSVEKDRPNAVLDAKPAKMETIESTLDRIDYANDESESKRNTSGGATF 562

Query: 764  -GNSEYTEVEAEDIIAKVPDAPVIASHAVLNGDGIIDESEKSPVFPGSFYGDPSEAFNQT 588
             G+ +    E+E +       P++ +  + N + +    E S V P S     S++   +
Sbjct: 563  FGDIKCASSESETMSKTYSPEPILDNPGIENEEPVALPLE-SDVMPRSSENTLSQS-ESS 620

Query: 587  VGNDATLENTERAATVLNYTKNADEEMN---LSSVPCTEGILLLREQAVENGMALVLDDH 417
            V +   L+  E  A        A +++N     + PCTE +LL  +QAVE+G A+VLDD 
Sbjct: 621  VMDSLNLDQLEDVA-------QASQDINGPARKTAPCTERVLLFMKQAVESGSAVVLDDA 673

Query: 416  NLDADTVFKKSVDFAKTAPTGPVFSLQRKQLAVQKNKEQERDDNSGSKEKEAGAALGTEV 237
             LDAD +++++V FA++AP GPVF  Q +++AVQKN +QE   N   KE +A        
Sbjct: 674  TLDADIIYERAVAFARSAPPGPVFRHQPRKVAVQKNGKQE-PANLEVKELKA-------- 724

Query: 236  TVPGR-RNERKTSRNEKLKDIKADYLNVVPQGNLRIDELAKLLA 108
             VP +  NE++ S+ +++K I   +L++VP+G+L +DELAKLLA
Sbjct: 725  -VPNKGGNEKQASKTQRIKYIDERHLDIVPRGSLGVDELAKLLA 767


>ref|XP_004287455.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Fragaria
            vesca subsp. vesca]
          Length = 804

 Score =  645 bits (1665), Expect = 0.0
 Identities = 367/781 (46%), Positives = 477/781 (61%), Gaps = 72/781 (9%)
 Frame = -3

Query: 2234 RLPTEIRFSRWNNANAQKFIRHDRNQKELEDQIRIEKRFDSAL---TIAHNYNPAPPHPT 2064
            R PTE+RF+RWNNANA+KF +  R Q+E+ED  R E+RFDSA    T++   +      T
Sbjct: 28   RPPTEVRFARWNNANAEKFNQRRRAQQEIEDDFRRERRFDSATRIATVSVAGSSTSDAET 87

Query: 2063 TFXXXXXXXXXXXXXXXXXXXXXXKTPS-RKTLHPAFKPLPRPRKIP-VNENETEKSSGL 1890
             F                      + P+   + HPAF+ + +P K+  +   + E     
Sbjct: 88   AFKSIGTPSSPSRPSIPGKKSKYSENPNPNPSSHPAFRRVIKPTKLSSITREKPEVDRKA 147

Query: 1889 NFRIDENGVSYEIPEAPFVYQYSYTETPKVKPVKLREPLVSPFGPGTMAKPWLGRXXXXX 1710
            N  I ++G+SY I  APF ++YSYTETPK KP+KLREP  +PFGP TM +PW GR     
Sbjct: 148  NISIGDDGLSYVIDGAPFEFKYSYTETPKQKPIKLREPPYAPFGPTTMGRPWTGRAPLPA 207

Query: 1709 XXXXXPEFDSFQLPPPHKKGVKPVQAPGPFLPGSGPKYVRSREEVLGTPLTKEEIEELIK 1530
                  EFDSFQLPPPHKKGV+PVQ+PGP+LPGSGPKYV+SREE+LG PLT +E+++L+ 
Sbjct: 208  SKKKMKEFDSFQLPPPHKKGVRPVQSPGPYLPGSGPKYVKSREEILGDPLTDQEVKDLVN 267

Query: 1529 GSKKSNRQLNMGRDGLTHNMLDNIHALWKRRRVCKIKCKGVCTVDMDNVCQQLEEKTGGK 1350
            G  K+ RQLNMGRDGLTHNMLDNIHA WKRRRVCKIKCKGVCTVDM+NVCQQLEE+TGGK
Sbjct: 268  GCIKTRRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMENVCQQLEERTGGK 327

Query: 1349 IIYNRGGVIYLFRGRNYNYKSRPRFPLMLWKPVTPVYPRLIQRVPEGLTLEEANDMRKRG 1170
            IIY RGGVI+LFRGRNYNYK+RPRFPLMLW+P+TPVYPRLIQR PEGLT+EEA +MRK+G
Sbjct: 328  IIYRRGGVIFLFRGRNYNYKTRPRFPLMLWRPITPVYPRLIQRAPEGLTVEEATEMRKKG 387

Query: 1169 SYLTPICKLAKNGVYCDLVKNVREAFEACELVRINCQGLNPSDYKKIGAKLKDLVPCVLL 990
              L PI KL KNGVY DLV NVREAFE CELVRI+CQG+N SDY+KIGAKLKDLVPCVL+
Sbjct: 388  RDLIPIRKLGKNGVYSDLVDNVREAFEECELVRIDCQGMNGSDYRKIGAKLKDLVPCVLI 447

Query: 989  SFECEHILVWRGRDWQS-LLEPDESLKGLQEVKDDDVAXXXXXXXXXXXXXLC-----IM 828
            SFE E IL+WRGR+W+S L+ P+ +LK ++E   DD               +C     + 
Sbjct: 448  SFERESILMWRGREWKSSLVNPESNLKEVKESNVDDSPSIALSLEGEDASTVCAFTGSVK 507

Query: 827  EDKPNDLEISLSPTYSN----EESQGNSEYTEVEAEDIIAKVPDAPVIASHAVLNG-DGI 663
            +  P  ++ S+S + +     E ++  S    +E   II  V D         ++   G 
Sbjct: 508  DANPEMIDTSISSSIAEVVGAEGTEDPSPSPYIEPPAIIDTVSDVGSTCETVTISDIKGF 567

Query: 662  IDESEK-------SPVFPG--SFYGDPSEAFNQTVGNDATLENTERA-----------AT 543
             D+  +       S V P   S+  D SE  + T G +  L+NT  A             
Sbjct: 568  RDDEAELNMKAYSSLVIPEDTSYADDESETISSTSGTEDILDNTRHADEASPTTSVGTGA 627

Query: 542  VLNYTKNADEEMN-LSSVP-------------------------CTEGILLLREQAVENG 441
            +L   +N + ++N L   P                         C E +L L  +AV +G
Sbjct: 628  ILVTVENTETKLNTLMESPGSNKTPQDASVASQNLNERAKLCAACKEKVLSLLNEAVGSG 687

Query: 440  MALVLDDHNLDADTVFKKSVDFAKTAPTGPVF--------SLQRKQLAVQKNKEQERDDN 285
             AL+LDD +LDAD +++++VD AK+AP GPVF        +  RK+L V+K K++  +  
Sbjct: 688  SALILDDSSLDADIIYQRAVDLAKSAPPGPVFKHRSSRGSAQMRKKLVVRKQKQEATE-- 745

Query: 284  SGSKEKEAGAALGTEVTVPGRRNERKTSR--NEKLKDIKADYLNVVPQGNLRIDELAKLL 111
               + KE             +R+ERK S+    + +D      ++VPQG+LR+DELAKLL
Sbjct: 746  --LEVKEITVYDMQRNLGEKKRSERKDSKVHRTRTRDFGEPLDSIVPQGSLRVDELAKLL 803

Query: 110  A 108
            A
Sbjct: 804  A 804


>ref|XP_002332503.1| predicted protein [Populus trichocarpa]
          Length = 699

 Score =  643 bits (1659), Expect = 0.0
 Identities = 368/716 (51%), Positives = 463/716 (64%), Gaps = 5/716 (0%)
 Frame = -3

Query: 2240 THRLPTEIRFSRWNNANAQKFIRHDRNQKELEDQIRIEKRFDSALTIAHNYNP--APPHP 2067
            +HR  TE+ FSRW NANA KF +  R+Q+E+E+ I   +RF SA  I  NY+P  A    
Sbjct: 21   SHRPSTEVHFSRWFNANADKFNQRYRSQQEIEEDISRRRRFTSANNIVTNYDPKNAAEVD 80

Query: 2066 TTFXXXXXXXXXXXXXXXXXXXXXXKTPSRKTLHPAFKPLPRPRKIPVNENETEK--SSG 1893
             +F                        P +KT HPAF  LP+  ++P+  N  +      
Sbjct: 81   ISFFKSTGTPSSPSSPSIPGKKSKYSKPLKKT-HPAF--LPKITRVPLPRNNAKPPIDRK 137

Query: 1892 LNFRIDENGVSYEIPEAPFVYQYSYTETPKVKPVKLREPLVSPFGPGTMAKPWLGRXXXX 1713
             + ++ E+GVSY I  APF ++YSYTETPKVKP+KLRE   +PFGP TM +PW GR    
Sbjct: 138  ADIKLSEDGVSYVIDGAPFEFKYSYTETPKVKPLKLREAPYAPFGPITMPRPWTGRAPLP 197

Query: 1712 XXXXXXPEFDSFQLPPPHKKGVKPVQAPGPFLPGSGPKYVRSREEVLGTPLTKEEIEELI 1533
                   EFDSF LPPP KKGVKPVQAPGPFLPG+GP+Y ++REE+LG PLT+EEI+EL+
Sbjct: 198  PSKKKLREFDSFVLPPPDKKGVKPVQAPGPFLPGAGPRYAKTREEILGDPLTQEEIQELV 257

Query: 1532 KGSKKSNRQLNMGRDGLTHNMLDNIHALWKRRRVCKIKCKGVCTVDMDNVCQQLEEKTGG 1353
             G  K+ RQLNMGRDGLTHNMLDNIHA WKRRRVCKIKCKGVCTVDMDNVCQQLEE+TGG
Sbjct: 258  DGCLKAKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVCQQLEERTGG 317

Query: 1352 KIIYNRGGVIYLFRGRNYNYKSRPRFPLMLWKPVTPVYPRLIQRVPEGLTLEEANDMRKR 1173
            KIIY +GGV+YLFRGRNYNY+ RPRFPLMLWKPVTPVYPRLIQR PEGLTL+EA+ MR +
Sbjct: 318  KIIYRKGGVLYLFRGRNYNYRFRPRFPLMLWKPVTPVYPRLIQRAPEGLTLQEASGMRNK 377

Query: 1172 GSYLTPICKLAKNGVYCDLVKNVREAFEACELVRINCQGLNPSDYKKIGAKLKDLVPCVL 993
            G  L PICKL KNGVY DLV+NVREAFE CELVRINCQG+N SD++KIGAKL+DLVPCVL
Sbjct: 378  GRKLIPICKLGKNGVYRDLVRNVREAFEECELVRINCQGMNGSDFRKIGAKLRDLVPCVL 437

Query: 992  LSFECEHILVWRGRDWQSLLEPDESLKGLQEVKDDDVAXXXXXXXXXXXXXLCIMEDKPN 813
            +SFECEHIL+WRGRDW+S           + V D D A               ++E   N
Sbjct: 438  ISFECEHILMWRGRDWKSSF--------TKPVNDGDEAKNSSIDGATSATP--LLEGLQN 487

Query: 812  D-LEISLSPTYSNEESQGNSEYTEVEAEDIIAKVPDAPVIASHAVLNGDGIIDESEKSPV 636
            +   +  + T + + S+ ++   E + ED+  K  D    A+   ++    I ES+ +P 
Sbjct: 488  ETFSVKDASTLNLKTSRMDA---EDQGEDLSQKDID-ETFAAKIFISTSTEIYESKTTPD 543

Query: 635  FPGSFYGDPSEAFNQTVGNDATLENTERAATVLNYTKNADEEMNLSSVPCTEGILLLREQ 456
               S     SEA     G++  L+N    + V    K     +N S    T+G+L L +Q
Sbjct: 544  NDDSSAVTKSEAMRIASGSE--LQNVSEGSHVSELAK-----LNES---YTQGVLELLKQ 593

Query: 455  AVENGMALVLDDHNLDADTVFKKSVDFAKTAPTGPVFSLQRKQLAVQKNKEQERDDNSGS 276
            AVE G A+VL D NLDAD V++K+V FA++AP GPVF  Q +   VQK++ QE   N   
Sbjct: 594  AVEIGSAVVL-DANLDADAVYQKAVAFAQSAPPGPVFRRQPRNTVVQKSEMQE---NGEL 649

Query: 275  KEKEAGAALGTEVTVPGRRNERKTSRNEKLKDIKADYLNVVPQGNLRIDELAKLLA 108
            + K+      T  +  G  +ERK+S+  + K     Y++ VPQG+LR+DELAKLLA
Sbjct: 650  EVKQV-----TSFSKMGGGSERKSSKVRR-KYFNEQYVDSVPQGSLRVDELAKLLA 699


>gb|EXB59798.1| CRS2-associated factor 1 [Morus notabilis]
          Length = 792

 Score =  642 bits (1656), Expect = 0.0
 Identities = 371/777 (47%), Positives = 466/777 (59%), Gaps = 67/777 (8%)
 Frame = -3

Query: 2237 HRLPTEIRFSRWNNANAQKFIRHDRNQKELEDQIRIEKRFDSALTIAHNYNPAPPHPTT- 2061
            HRLPTE+RFSRWNNANA+KF    R  +++ED IR ++RFDSA  I+   + A P     
Sbjct: 24   HRLPTELRFSRWNNANAEKFNERRRTLQQIEDDIRRQRRFDSATRISDIPDSASPSTAGS 83

Query: 2060 -----FXXXXXXXXXXXXXXXXXXXXXXKTPSRK---TLHPAFKPLPRPRKIPVNE---- 1917
                 F                      K P+       HPAF+PL R RKI V E    
Sbjct: 84   ATGEFFKSIGTPSSPSRPSIPGKKSKYSKNPNPSFDSRSHPAFRPLRRVRKIAVKELSGL 143

Query: 1916 --NETEKSSGLNFRIDENGVSYEIPEAPFVYQYSYTETPKVKPVKLREPLVSPFGPGTMA 1743
              ++ +     + R+ E+GVSY I  APF ++YSYTETPK +PVKLRE   +PFGP TM 
Sbjct: 144  PKDKRDVERKADVRVGEDGVSYVIDGAPFEFKYSYTETPKAQPVKLREAPYAPFGPTTMP 203

Query: 1742 KPWLGRXXXXXXXXXXPEFDSFQLPPPHKKGVKPVQAPGPFLPGSGPKYVRSREEVLGTP 1563
            +PW GR           EFDSF+L PPHKKGVKPVQAPGPFLPGSGPKYV SREE+LG P
Sbjct: 204  RPWTGRAPLPPSKKKLKEFDSFRLSPPHKKGVKPVQAPGPFLPGSGPKYVMSREEILGEP 263

Query: 1562 LTKEEIEELIKGSKKSNRQLNMGRDGLTHNMLDNIHALWKRRRVCKIKCKGVCTVDMDNV 1383
            LT+EEI++LI+G +K+ RQ+NMGRDGLTHNMLDNIHA WKRRRVCKIKCKGVCTVDMDNV
Sbjct: 264  LTEEEIKDLIEGCRKTKRQMNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNV 323

Query: 1382 CQQLEEKTGGKIIYNRGGVIYLFRGRNYNYKSRPRFPLMLWKPVTPVYPRLIQRVPEGLT 1203
             +QLEE+TGGKIIY +GGVI+LFRGRNYNY++RPRFPLMLWKPVTPVYPRL++RVPEGLT
Sbjct: 324  KEQLEERTGGKIIYGKGGVIFLFRGRNYNYRTRPRFPLMLWKPVTPVYPRLVKRVPEGLT 383

Query: 1202 LEEANDMRKRGSYLTPICKLAKNGVYCDLVKNVREAFEACELVRINCQGLNPSDYKKIGA 1023
            LEEA +MRK+G  L PICKL KNGVY +LVK+VREAFE CELVRINCQG+N SDY+KIGA
Sbjct: 384  LEEAKEMRKKGHKLMPICKLGKNGVYHNLVKHVREAFEECELVRINCQGMNGSDYRKIGA 443

Query: 1022 KLKDLVPCVLLSFECEHILVWRGRDWQSLLEPDESLKGLQEVKDDDVAXXXXXXXXXXXX 843
            KLKDLVPCVLLSF  EHIL+WRG DW+S L   + +K   E K+ DV             
Sbjct: 444  KLKDLVPCVLLSFAFEHILIWRGCDWKSSL--PKLVKDRDEAKESDVQIVTSVAPSVEGE 501

Query: 842  XLCIMEDKPNDLEISLSPTYS------------NEESQGNSEYTE--------------- 744
             + +     ND  + L  T S              E   + EY E               
Sbjct: 502  EVAMSTGSVNDASLELISTTSTLNRSHEVIGTEGREDSSSVEYVEPCSTTGDVSNEIKTF 561

Query: 743  --VEAEDIIAKVPDAPVIASHAVLNG--------DGIIDESEKSPVFPGSFYGDPSEAFN 594
               +  D+   V D     S+   NG        +G   +S +      +  G  +    
Sbjct: 562  ATEKISDVQIPVDDRLGDTSNTSYNGTTSENSGSNGTRSDSIECDGLSTAMLGLDTIIPK 621

Query: 593  QTVGNDATLENTERAATVLNYTKNADEEM-------NLSSVPCTEGILLLREQAVENGMA 435
               GN         A ++ N  +    E+          + PCTEG+L L +QAV  G+A
Sbjct: 622  VADGNAEMKSALFEADSLANEKEQVPSEVLQDVNQPTRLNAPCTEGVLSLLQQAVVGGLA 681

Query: 434  LVLDDHNLDADTVFKKSVDFAKTAPTGPVF-----SLQRKQLAVQKNK--EQERDDNSGS 276
            ++LD+ NLD+D V++++V F+++AP GPVF      +  K++ V+ ++  E E+ D    
Sbjct: 682  IILDEDNLDSDVVYQRTVAFSQSAPPGPVFKGRPRKMLPKKVMVKNSEVLENEKQDTEDF 741

Query: 275  KEKEAGAALGTEVTVPGRRNERKTSRNEKLKDIKADYLN-VVPQGNLRIDELAKLLA 108
              KE       E       + +K S+  + KD   +  N VVPQG+LR+DELAKLLA
Sbjct: 742  APKEIRTIYVKE------GSGKKASKARRRKDFGENLDNVVVPQGSLRVDELAKLLA 792


>ref|XP_006389456.1| hypothetical protein POPTR_0024s00430g [Populus trichocarpa]
            gi|550312256|gb|ERP48370.1| hypothetical protein
            POPTR_0024s00430g [Populus trichocarpa]
          Length = 731

 Score =  641 bits (1654), Expect = 0.0
 Identities = 368/738 (49%), Positives = 468/738 (63%), Gaps = 27/738 (3%)
 Frame = -3

Query: 2240 THRLPTEIRFSRWNNANAQKFIRHDRNQKELEDQIRIEKRFDSALTIAHNYNP--APPHP 2067
            +HR  TE+ FSRW NANA KF +  R+Q+E+E+ I   +RF SA  I  NY+P  A    
Sbjct: 21   SHRPSTEVHFSRWFNANADKFNQRYRSQQEIEEDISRRRRFTSANNIVTNYDPKNAAEVD 80

Query: 2066 TTFXXXXXXXXXXXXXXXXXXXXXXKTPSRKTLHPAFKPLPRPRKIPVNENETEK--SSG 1893
             +F                        P +KT HPAF  LP+  ++P+  N  +      
Sbjct: 81   ISFFKSTGTPSSPSSPSIPGKKSKYSKPLKKT-HPAF--LPKITRVPLPRNNAKPPIDRK 137

Query: 1892 LNFRIDENGVSYEIPEAPFVYQYSYTETPKVKPVKLREPLVSPFGPGTMAKPWLGRXXXX 1713
             + ++ E+GVSY I  APF ++YSYTETPKVKP+KLRE   +PFGP TM +PW GR    
Sbjct: 138  ADIKLSEDGVSYVIDGAPFEFKYSYTETPKVKPLKLREAPYAPFGPITMPRPWTGRAPLP 197

Query: 1712 XXXXXXPEFDSFQLPPPHKKGVKPVQAPGPFLPGSGPKYVRSREEVLGTPLTKEEIEELI 1533
                   EFDSF LPPP KKGVKPVQAPGPFLPG+GP+Y ++REE+LG PLT+EEI+EL+
Sbjct: 198  PSKKKLREFDSFVLPPPDKKGVKPVQAPGPFLPGAGPRYAKTREEILGDPLTQEEIQELV 257

Query: 1532 KGSKKSNRQLNMGRDGLTHNMLDNIHALWKRRRVCKIKCKGVCTVDMDNVCQQLEEKTGG 1353
             G  K+ RQLNMGRDGLTHNMLDNIHA WKRRRVCKIKCKGVCTVDMDNVCQQLEE+TGG
Sbjct: 258  DGCLKAKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVCQQLEERTGG 317

Query: 1352 KIIYNRGGVIYLFRGRNYNYKSRPRFPLMLWKPVTPVYPRLIQRVPEGLTLEEANDMRKR 1173
            KIIY +GGV+YLFRGRNYNY+ RPRFPLMLWKPVTPVYPRLIQR PEGLTL+EA+ MR +
Sbjct: 318  KIIYRKGGVLYLFRGRNYNYRFRPRFPLMLWKPVTPVYPRLIQRAPEGLTLQEASGMRNK 377

Query: 1172 GSYLTPICKLAKNGVYCDLVKNVREAFEACELVRINCQGLNPSDYKKIGAKLKDLVPCVL 993
            G  L PICKL KNGVY DLV+NVREAFE CELVRINCQG+N SD++KIGAKL+DLVPCVL
Sbjct: 378  GRKLIPICKLGKNGVYRDLVRNVREAFEECELVRINCQGMNGSDFRKIGAKLRDLVPCVL 437

Query: 992  LSFECEHILVWRGRDWQSLLEPDESLKGLQEVKDDDVAXXXXXXXXXXXXXLCIMEDKPN 813
            +SFECEHIL+WRGRDW+S           + V D D A               ++E   N
Sbjct: 438  ISFECEHILMWRGRDWKSSF--------TKPVNDGDEAKNSSIDGATSATP--LLEGLQN 487

Query: 812  D-LEISLSPTYSNEESQGNSEYTEVEAEDIIAKVPDAPVIASHAVLNGDGIIDESEKSPV 636
            +   +  + T + + S+ ++   E + ED+  K  D    A+   ++    I ES+ +P 
Sbjct: 488  ETFSVKDASTLNLKTSRMDA---EDQGEDLSQKDID-ETFAAKIFISTSTEIYESKTTPD 543

Query: 635  FPGSFYGDPSEAFNQTVGNDATLEN-----------TERAATVLNYTKNADEEMNLS--- 498
               S     SEA     G++  L++           +  + T L    N ++  N+S   
Sbjct: 544  NDDSSAVTKSEAMRIASGSEVILDDRGYIDEMLITTSVESDTTLERIGNMEKLQNVSEGS 603

Query: 497  --------SVPCTEGILLLREQAVENGMALVLDDHNLDADTVFKKSVDFAKTAPTGPVFS 342
                    +   T+G+L L +QAVE G A+VL D NLDAD V++K+V FA++AP GPVF 
Sbjct: 604  HVSELAKLNESYTQGVLELLKQAVEIGSAVVL-DANLDADAVYQKAVAFAQSAPPGPVFR 662

Query: 341  LQRKQLAVQKNKEQERDDNSGSKEKEAGAALGTEVTVPGRRNERKTSRNEKLKDIKADYL 162
             Q +   VQK++ QE   N   + K+      T  +  G  +ERK+S+  + K     Y+
Sbjct: 663  RQPRNTVVQKSEMQE---NGELEVKQV-----TSFSKMGGGSERKSSKVRR-KYFNEQYV 713

Query: 161  NVVPQGNLRIDELAKLLA 108
            + VPQG+LR+DELAKLLA
Sbjct: 714  DSVPQGSLRVDELAKLLA 731


>ref|XP_002535109.1| conserved hypothetical protein [Ricinus communis]
            gi|223524018|gb|EEF27274.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 748

 Score =  632 bits (1630), Expect = e-178
 Identities = 349/731 (47%), Positives = 470/731 (64%), Gaps = 21/731 (2%)
 Frame = -3

Query: 2237 HRLPTEIRFSRWNNANAQKFIRHDRNQKELEDQIRIEKRFDSALTIAHNYNPAPPHPTTF 2058
            HR P++I FSRWNNANA++F    R QKE+E+ IR  +RF+SA  I  NY+ A  +    
Sbjct: 28   HRPPSDIHFSRWNNANAREFNDRRRAQKEIEEDIRRNRRFNSAANIIDNYDSATSNENFK 87

Query: 2057 XXXXXXXXXXXXXXXXXXXXXXKTPSRKTLH-PAFKPLPRPRKIPVNENETEKSSGLNFR 1881
                                    P   T H PAF+ + +  K P+ E   ++++ +  +
Sbjct: 88   SKSIGTPSSPSAPSIPGRKSKYSKPESPTSHHPAFRSISKITKKPLPEKPIDRNADV--K 145

Query: 1880 IDENGVSYEIPEAPFVYQYSYTETPKVKPVKLREPLVSPFGPGTMAKPWLGRXXXXXXXX 1701
            + E+G+S+ +  APF ++YSYTETPK KP+KLRE   SPFGP TM +PW GR        
Sbjct: 146  LSEDGLSFVVDGAPFEFKYSYTETPKAKPIKLREAPFSPFGPTTMGRPWTGRAPLPPSKK 205

Query: 1700 XXPEFDSFQLPPPHKKGVKPVQAPGPFLPGSGPKYVRSREEVLGTPLTKEEIEELIKGSK 1521
               EFDSF+LPPP KKGVKPVQ PGPFLPG+GP+YV SREE+LG PLT EE++ LI+G  
Sbjct: 206  KLREFDSFKLPPPDKKGVKPVQKPGPFLPGAGPRYVYSREEILGEPLTTEEVKILIEGCL 265

Query: 1520 KSNRQLNMGRDGLTHNMLDNIHALWKRRRVCKIKCKGVCTVDMDNVCQQLEEKTGGKIIY 1341
            K+ RQLNMGRDGLTHNMLDNIHA WKRRRVCKIKC GVCTVDMDNVCQQLEE+TGGK+IY
Sbjct: 266  KTRRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCMGVCTVDMDNVCQQLEERTGGKVIY 325

Query: 1340 NRGGVIYLFRGRNYNYKSRPRFPLMLWKPVTPVYPRLIQRVPEGLTLEEANDMRKRGSYL 1161
             +GGV+YLFRGRNYNY++RPRFPLMLWKPVTPVYPRLI+R PEGLTLEEA++MR++G  L
Sbjct: 326  RKGGVVYLFRGRNYNYRTRPRFPLMLWKPVTPVYPRLIKRAPEGLTLEEASEMRRKGRKL 385

Query: 1160 TPICKLAKNGVYCDLVKNVREAFEACELVRINCQGLNPSDYKKIGAKLKDLVPCVLLSFE 981
             PICKLAKNGVYC+LVK VREAFE CELVRI+CQG+N SDY+K+GAKLK+LVPC+L+SFE
Sbjct: 386  IPICKLAKNGVYCNLVKEVREAFEECELVRIDCQGVNGSDYRKVGAKLKELVPCLLISFE 445

Query: 980  CEHILVWRGRDWQ-SLLEP-DESLKGLQEVKDDDVAXXXXXXXXXXXXXLCIMEDKPNDL 807
             EHIL+WRGRDW+ S+++P ++S++ +    D + A             +   ED  +  
Sbjct: 446  HEHILMWRGRDWKSSMIKPVNDSVEAIG--SDVNSATSIASVLEDQIMEIVSHEDGLSKP 503

Query: 806  EISLSPTYSNEESQGN------------SEYTEVEAEDI--IAKVPDAPVIASHAVLN-- 675
            ++S  P  S +E   +            +  T VE  +I  + +   +  ++   V+N  
Sbjct: 504  DMSTIPVGSMDEQAEHPSILDGTSVAIGASSTTVEMSEINPMTESGSSSAVSESEVINNA 563

Query: 674  --GDGIIDESEKSPVFPGSFYGDPSEAFNQTVGNDATLENTERAATVLNYTKNADEEMNL 501
               + +++  + +   P +     SE   ++VG+   L +       +  + + ++  NL
Sbjct: 564  VGSESVVNNMDPANEMPVAM-SVSSETVLESVGSKKELHDVS-----IECSDDVNKPANL 617

Query: 500  SSVPCTEGILLLREQAVENGMALVLDDHNLDADTVFKKSVDFAKTAPTGPVFSLQRKQLA 321
             SV   + +LLL +QAVE+G AL+L D +LDAD V++++V FAK+AP GPVF  + K+ +
Sbjct: 618  -SVSYADRVLLLWKQAVESGSALILVDADLDADIVYQRAVAFAKSAPPGPVFRHRSKKAS 676

Query: 320  VQKNKEQERDDNSGSKEKEAGAALGTEVTVPGRRNERKTSRNEKLKDIKADYLNVVPQGN 141
            ++K+++QE  D S  KE      L T V+       + +    K K  +   LN    G 
Sbjct: 677  IRKSEKQESKD-SEPKEFLNLEYLETNVSQTMGSENKSSKPQRKKKSREQQNLNSARLGR 735

Query: 140  LRIDELAKLLA 108
            L +DELAKLLA
Sbjct: 736  LGVDELAKLLA 746


>ref|XP_004139352.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Cucumis
            sativus] gi|449521361|ref|XP_004167698.1| PREDICTED:
            CRS2-associated factor 1, chloroplastic-like [Cucumis
            sativus]
          Length = 745

 Score =  619 bits (1595), Expect = e-174
 Identities = 353/742 (47%), Positives = 455/742 (61%), Gaps = 31/742 (4%)
 Frame = -3

Query: 2240 THRLPTEIRFSRWNNANAQKFIRHDRNQKELEDQIRIEKRFDSALTIAHNYNPAPPHPT- 2064
            +HR  TEIRFSRW NANA+KF +  R+Q+E+ED+IR E+RF SA  I    +   P    
Sbjct: 23   SHRTLTEIRFSRWYNANAEKFEQRRRSQQEIEDEIRRERRFSSAAKIVDLCDSDSPSSAI 82

Query: 2063 ----TFXXXXXXXXXXXXXXXXXXXXXXKTPSRKTLHPAFKPLPRPRKIPVNENETEKSS 1896
                TF                      K P+  +  P F+ + + +K      E     
Sbjct: 83   DRNETFRSVGTPSSPSRPSIPGRKSKYSKNPNPDSPSP-FRQVSKTKKTMNAPEERHIGV 141

Query: 1895 GLNFRIDENGVSYEIPEAPFVYQYSYTETPKVKPVKLREPLVSPFGPGTMAKPWLGRXXX 1716
              N  + E+GVSY I  APF ++YSYTETPKVKP+KLREP  +PFGP TM++PW GR   
Sbjct: 142  EANVSLSEDGVSYVIDGAPFEFKYSYTETPKVKPIKLREPY-APFGPTTMSRPWTGRAPL 200

Query: 1715 XXXXXXXPEFDSFQLPPPHKKGVKPVQAPGPFLPGSGPKYVRSREEVLGTPLTKEEIEEL 1536
                   PEFDSFQLPP +KKGVKPVQAPGPFL GSGPKYV SREE+LG PLTKEEI+ L
Sbjct: 201  PPSKKKLPEFDSFQLPPKNKKGVKPVQAPGPFLAGSGPKYVMSREEILGEPLTKEEIKAL 260

Query: 1535 IKGSKKSNRQLNMGRDGLTHNMLDNIHALWKRRRVCKIKCKGVCTVDMDNVCQQLEEKTG 1356
            I+G   SNRQLN+GRDGLTHNML+NIHALWKRRRVCKIKCKGVCTVDMDNV QQLEE+TG
Sbjct: 261  IRGCINSNRQLNIGRDGLTHNMLENIHALWKRRRVCKIKCKGVCTVDMDNVKQQLEERTG 320

Query: 1355 GKIIYNRGGVIYLFRGRNYNYKSRPRFPLMLWKPVTPVYPRLIQRVPEGLTLEEANDMRK 1176
            GKIIY+RGG +YL+RGRNYNYK+RPRFPLMLWKP  PVYPRL++ +P+GLTLEE  +MRK
Sbjct: 321  GKIIYSRGGALYLYRGRNYNYKTRPRFPLMLWKPAAPVYPRLVKHIPDGLTLEEVTEMRK 380

Query: 1175 RGSYLTPICKLAKNGVYCDLVKNVREAFEACELVRINCQGLNPSDYKKIGAKLKDLVPCV 996
            +G  L PICKL KNGVY  LVK+VREAFE CELVRINCQGLN SD++KIGAKLKDLVPCV
Sbjct: 381  KGRKLIPICKLGKNGVYSALVKHVREAFEECELVRINCQGLNGSDFRKIGAKLKDLVPCV 440

Query: 995  LLSFECEHILVWRGRDWQSLL-------------------------EPDESLKG-LQEVK 894
            L+SFE EHIL+WRGRDW+S L                         E D S+K  L  + 
Sbjct: 441  LISFESEHILLWRGRDWKSSLPYIERNPEGAKAHGTDETTIVAPSIEQDVSVKNTLTSLD 500

Query: 893  DDDVAXXXXXXXXXXXXXLCIMEDKPNDLEISLSPTYSNEESQGNSEYTEVEAEDIIAKV 714
             +D++               I      D++   +  + +     + E T ++ + +    
Sbjct: 501  SEDLSTGGNEDPDSMIAEKSISA----DVDSLTTTMHESNFVSYDEEATGLDDQKLHTAT 556

Query: 713  PDAPVIASHAVLNGDGIIDESEKSPVFPGSFYGDPSEAFNQTVGNDATLENTERAATVLN 534
                + +   +  G+    E E    F  S + D +E   Q   +  ++  T  + T   
Sbjct: 557  TSEDLDSWSTISGGE---SEIESGYEFSDSDF-DEAEPMEQLEFD--SIAATGNSETNGL 610

Query: 533  YTKNADEEMNLSSVPCTEGILLLREQAVENGMALVLDDHNLDADTVFKKSVDFAKTAPTG 354
            YT    + +   +   T+G+L L +QAVENG A+VLD  +LDAD ++++SV F+++AP  
Sbjct: 611  YTSEGSQALTKPTSNATDGVLQLLKQAVENGSAVVLDSSSLDADVIYQQSVAFSQSAPPS 670

Query: 353  PVFSLQRKQLAVQKNKEQERDDNSGSKEKEAGAALGTEVTVPGRRNERKTSRNEKLKDIK 174
            PVF  +R++       E+E       KE+E      T V++    +++K S+ +K K+  
Sbjct: 671  PVFKHERRKKVAADKSEEETSRELEVKEEE------TAVSMEVGNDKKKDSKTKKNKNF- 723

Query: 173  ADYLNVVPQGNLRIDELAKLLA 108
             +Y    PQG+L +DELAKLLA
Sbjct: 724  GEYNFSSPQGSLGVDELAKLLA 745


>ref|NP_565462.1| CRS2-associated factor 1 [Arabidopsis thaliana]
            gi|75266026|sp|Q9SL79.2|CAF1P_ARATH RecName:
            Full=CRS2-associated factor 1, chloroplastic; AltName:
            Full=Chloroplastic group IIA intron splicing facilitator
            CRS2-associated factor 1; Flags: Precursor
            gi|15028051|gb|AAK76556.1| unknown protein [Arabidopsis
            thaliana] gi|20197570|gb|AAD24394.2| expressed protein
            [Arabidopsis thaliana] gi|28393847|gb|AAO42331.1| unknown
            protein [Arabidopsis thaliana]
            gi|330251862|gb|AEC06956.1| CRS2-associated factor 1
            [Arabidopsis thaliana]
          Length = 701

 Score =  614 bits (1584), Expect = e-173
 Identities = 350/730 (47%), Positives = 448/730 (61%), Gaps = 21/730 (2%)
 Frame = -3

Query: 2234 RLPTEIRFSRWNNANAQKFIRHDRNQKELEDQIRIEKRFDSALTIAHNYNP----APPHP 2067
            R P+EIRFSRW NANA++F +  R+Q+ELE +IR ++RFD+A  I H ++     A P  
Sbjct: 23   RAPSEIRFSRWGNANAERFEQRRRSQEELEAEIRRDRRFDAATKIVHTHDSEAAAAEPKT 82

Query: 2066 TTFXXXXXXXXXXXXXXXXXXXXXXKTPSRKTLHPAFKPLP-RPRKIP-VNENETEKSSG 1893
            + F                        P R++ +      P RP+  P V ++  +  + 
Sbjct: 83   SPFRSRGTPSLPSARSI----------PGRRSKYSKPDSGPNRPKNKPRVPDSPPQLDAK 132

Query: 1892 LNFRIDENGVSYEIPEAPFVYQYSYTETPKVKPVKLREPLVSPFGPGTMAKPWLGRXXXX 1713
               ++ E+G++Y I  APF ++YSYTETPKVKP+KLREP  +PFGP TM +PW GR    
Sbjct: 133  PEVKLSEDGLTYVINGAPFEFKYSYTETPKVKPLKLREPAYAPFGPTTMGRPWTGRAPLP 192

Query: 1712 XXXXXXPEFDSFQLPPPHKKGVKPVQAPGPFLPGSGPKYVRSREEVLGTPLTKEEIEELI 1533
                   EFDSF+LPP  KKG+KPVQ PGPF PG GP+YV S+EE+LG PLTKEE+ EL+
Sbjct: 193  QSQKTPREFDSFRLPPVGKKGLKPVQKPGPFRPGVGPRYVYSKEEILGEPLTKEEVRELV 252

Query: 1532 KGSKKSNRQLNMGRDGLTHNMLDNIHALWKRRRVCKIKCKGVCTVDMDNVCQQLEEKTGG 1353
                K+ RQLNMGRDGLTHNML+NIH LWKRRRVCKIKCKGVCTVDMDNVC+QLEEK GG
Sbjct: 253  TSCLKTTRQLNMGRDGLTHNMLNNIHDLWKRRRVCKIKCKGVCTVDMDNVCEQLEEKIGG 312

Query: 1352 KIIYNRGGVIYLFRGRNYNYKSRPRFPLMLWKPVTPVYPRLIQRVPEGLTLEEANDMRKR 1173
            K+IY RGGV++LFRGRNYN+++RPRFPLMLWKPV PVYPRLIQ+VPEGLT +EA +MR++
Sbjct: 313  KVIYRRGGVLFLFRGRNYNHRTRPRFPLMLWKPVAPVYPRLIQQVPEGLTRQEATNMRRK 372

Query: 1172 GSYLTPICKLAKNGVYCDLVKNVREAFEACELVRINCQGLNPSDYKKIGAKLKDLVPCVL 993
            G  L PICKL KNGVYCDLVKNV+EAFE CELVRI+CQG+  SD++KIGAKLKDLVPCVL
Sbjct: 373  GRELMPICKLGKNGVYCDLVKNVKEAFEVCELVRIDCQGMKGSDFRKIGAKLKDLVPCVL 432

Query: 992  LSFECEHILVWRGRDWQ-SLLEPDESLKGLQEVKDDDVAXXXXXXXXXXXXXLCIMEDKP 816
            +SFE E IL+WRGR+W+ SL  PD+    L++++ D                       P
Sbjct: 433  VSFENEQILIWRGREWKSSLTTPDKKGDILEDIEVDTAL--------------------P 472

Query: 815  NDLEISLSPTYSNEESQGNSEYTEVEAEDIIAKVPDAPVIASHAVLNGDGIIDESEKSPV 636
             D E S+SP  S   +Q N     +E ++     PD   ++   V       D SE    
Sbjct: 473  EDDEPSVSPNQSQTMTQ-NPPLDSMELQN----DPDGHDLSPSTV-------DSSEMEGT 520

Query: 635  FPGSFYGDPSEAFNQTVGNDATLENTERAATVLNYTKNADEEMNLSSVPCTEGILLLREQ 456
                      +    TV  D+ L + E             EE++  S+   E +L+L +Q
Sbjct: 521  INSLQSWSTKDVTEPTV--DSFLRDLEEPED----EPETSEEISKQSI---ERVLILMKQ 571

Query: 455  AVENGMALVLDDHNLDADTVFKKSVDFAKTAPTGPVFSL-QRKQLAVQKNKEQE------ 297
            AVE+G ALVLD  +LDADTVF K+V F+  A  GPVF    RKQ  V+K + QE      
Sbjct: 572  AVESGTALVLDAADLDADTVFSKAVAFSSVASPGPVFQHGLRKQPTVKKQESQEFGYGDL 631

Query: 296  --RDDN-----SGSKEKEAGAALGTEVTVPGRRNERKTSRNEKLKDIKADYLNVVPQGNL 138
              +  N     + SK          EV   G R E++    +K+ +   DY  V+P G L
Sbjct: 632  EAKSSNVVVSRNASKSSNVVVFGKREVAERGEREEKEEGSKKKMDEFAEDYREVMPHGTL 691

Query: 137  RIDELAKLLA 108
            ++DELAKLLA
Sbjct: 692  KVDELAKLLA 701


>ref|XP_002886005.1| hypothetical protein ARALYDRAFT_480467 [Arabidopsis lyrata subsp.
            lyrata] gi|297331845|gb|EFH62264.1| hypothetical protein
            ARALYDRAFT_480467 [Arabidopsis lyrata subsp. lyrata]
          Length = 700

 Score =  614 bits (1583), Expect = e-173
 Identities = 347/727 (47%), Positives = 440/727 (60%), Gaps = 18/727 (2%)
 Frame = -3

Query: 2234 RLPTEIRFSRWNNANAQKFIRHDRNQKELEDQIRIEKRFDSALTIAHNYN--PAPPHPTT 2061
            R P+EIRFSRW NANA++F +  R+Q+ELE +IR ++RFD+A  I H ++   A   P T
Sbjct: 23   RAPSEIRFSRWGNANAERFEQRRRSQEELEAEIRRDRRFDAATKIVHTHDSEAAASEPKT 82

Query: 2060 FXXXXXXXXXXXXXXXXXXXXXXKTPSRKTLH--PAFKPLPRPRKIPVNENETEKSSGLN 1887
                                     P R++ +  P   P     K  V ++  +  +   
Sbjct: 83   --------SPFRSRGTPSLPSARSIPGRRSKYSKPDSGPNKPKNKPRVPDSPPQLDAKPE 134

Query: 1886 FRIDENGVSYEIPEAPFVYQYSYTETPKVKPVKLREPLVSPFGPGTMAKPWLGRXXXXXX 1707
             ++ E+G+SY I  APF ++YSYTETPKVKP+KLREP  +PFGP TM +PW GR      
Sbjct: 135  VKLSEDGLSYVINGAPFEFKYSYTETPKVKPLKLREPAYAPFGPTTMGRPWTGRAPLPQS 194

Query: 1706 XXXXPEFDSFQLPPPHKKGVKPVQAPGPFLPGSGPKYVRSREEVLGTPLTKEEIEELIKG 1527
                 EFDSF+LPP  KKGVKPVQ PGPF PG GP+YV ++EE+LG PLTKEEI EL+  
Sbjct: 195  QKTPREFDSFRLPPDGKKGVKPVQKPGPFRPGLGPRYVYTKEEILGEPLTKEEIRELVTS 254

Query: 1526 SKKSNRQLNMGRDGLTHNMLDNIHALWKRRRVCKIKCKGVCTVDMDNVCQQLEEKTGGKI 1347
              K+ RQLNMGRDGLTHNML+NIH LWKRRRVCKIKCKGVCTVDMD VC+QLEEK GGK+
Sbjct: 255  CLKTTRQLNMGRDGLTHNMLNNIHDLWKRRRVCKIKCKGVCTVDMDKVCEQLEEKIGGKV 314

Query: 1346 IYNRGGVIYLFRGRNYNYKSRPRFPLMLWKPVTPVYPRLIQRVPEGLTLEEANDMRKRGS 1167
            IY RGGV++LFRGRNYN+++RPRFPLMLWKPV PVYPRLIQ+VPEGLTL+EA +MR++G 
Sbjct: 315  IYRRGGVLFLFRGRNYNHRTRPRFPLMLWKPVAPVYPRLIQQVPEGLTLQEATEMRRKGR 374

Query: 1166 YLTPICKLAKNGVYCDLVKNVREAFEACELVRINCQGLNPSDYKKIGAKLKDLVPCVLLS 987
             L PICKL KNGVYCDLVKNV+EAFE CELVRI+CQG+  SD++KIGAKLKDLVPCVL+S
Sbjct: 375  ELMPICKLGKNGVYCDLVKNVKEAFEVCELVRIDCQGMKGSDFRKIGAKLKDLVPCVLIS 434

Query: 986  FECEHILVWRGRDWQSLLE-PDESLKGLQEVKDDDVAXXXXXXXXXXXXXLCIMEDKPND 810
            FE E IL+WRGR+W+S L  PD+    L++++ D                       P D
Sbjct: 435  FENEQILIWRGREWKSSLTIPDKKDDILEDIEVDAAL--------------------PED 474

Query: 809  LEISLSPTYSNEESQGNSEYTEVEAEDIIAKVPDAPVIASHAVLNGDGIIDESEKSPVFP 630
             E S+SP  +   +Q                    P + S  + N  G  D S  +  F 
Sbjct: 475  DEASVSPNQTQTVTQN-------------------PPLDSMELQNDPGGHDLSPSTVDF- 514

Query: 629  GSFYGDPSEAFNQTVGNDATLENTERAATVLNYTKNADEEMNLSSVPCTEGILLLREQAV 450
             S   D S +       D T    + +       ++  E     S    E +L L +QAV
Sbjct: 515  -SAMEDTSNSLQSPSTKDLTEPTADSSIQDHEEPEHEPETSEEISKQSIERVLNLMKQAV 573

Query: 449  ENGMALVLDDHNLDADTVFKKSVDFAKTAPTGPVFSL-QRKQLAVQKNKEQE-----RDD 288
            E+G ALVLD  +LDADTVF K+V F+  A  GPVF    RKQ  V+K + +E      + 
Sbjct: 574  ESGTALVLDAADLDADTVFSKAVTFSTVASPGPVFQHGLRKQPTVKKQESREFGYRNLEA 633

Query: 287  NSGSKEKEAGAALGTEVTVPGRR-------NERKTSRNEKLKDIKADYLNVVPQGNLRID 129
             S +      A+  + V V G+R        E K    +K+ +   DY  V+P G L++D
Sbjct: 634  KSSNVVVSRNASKSSNVVVSGKREVAVSGEREEKEGLKKKMDEFAEDYREVIPHGTLKLD 693

Query: 128  ELAKLLA 108
            ELAKLLA
Sbjct: 694  ELAKLLA 700


>ref|XP_006408916.1| hypothetical protein EUTSA_v10001924mg [Eutrema salsugineum]
            gi|557110072|gb|ESQ50369.1| hypothetical protein
            EUTSA_v10001924mg [Eutrema salsugineum]
          Length = 678

 Score =  608 bits (1568), Expect = e-171
 Identities = 341/720 (47%), Positives = 447/720 (62%), Gaps = 11/720 (1%)
 Frame = -3

Query: 2234 RLPTEIRFSRWNNANAQKFIRHDRNQKELEDQIRIEKRFDSALTIAHNYNPAPP--HPTT 2061
            R P EIRFSRW NANA++F +  R+Q+ELE +IR ++RFD+A +I H ++ A     P T
Sbjct: 23   RGPGEIRFSRWGNANAERFEQRRRSQEELEAEIRRDRRFDAATSIVHTHDSAAAASEPKT 82

Query: 2060 FXXXXXXXXXXXXXXXXXXXXXXKTPSRKTLH--PAFKPLPRPRKIPVNENETEKSSGLN 1887
                                     P R++ +  P   P     K  V ++  +  +   
Sbjct: 83   --------SPFRSRGTPSLPSARSIPGRRSKYSKPDSGPTKPKNKPKVPDSPPQLDAKPE 134

Query: 1886 FRIDENGVSYEIPEAPFVYQYSYTETPKVKPVKLREPLVSPFGPGTMAKPWLGRXXXXXX 1707
             ++ E+G+SY I  APF ++YSYTETPKVKP+KLREP  +PFGP TM +PW GR      
Sbjct: 135  VKLSEDGLSYVIDGAPFEFKYSYTETPKVKPLKLREPAYAPFGPTTMGRPWTGRAPLPQS 194

Query: 1706 XXXXPEFDSFQLPPPHKKGVKPVQAPGPFLPGSGPKYVRSREEVLGTPLTKEEIEELIKG 1527
                 EFDSF+LPP  KKGVKP+Q PGPF PG GP+YV ++EE+LG PLTKEEI EL+  
Sbjct: 195  QKTPREFDSFRLPPVGKKGVKPIQKPGPFRPGVGPRYVYTKEEILGEPLTKEEIRELVTS 254

Query: 1526 SKKSNRQLNMGRDGLTHNMLDNIHALWKRRRVCKIKCKGVCTVDMDNVCQQLEEKTGGKI 1347
              K+ RQLNMGRDGLTHNML+NIH LWKRRRVCKIKCKGVCTVDMDNVC+QLEEK GGK+
Sbjct: 255  CLKTTRQLNMGRDGLTHNMLNNIHDLWKRRRVCKIKCKGVCTVDMDNVCEQLEEKIGGKV 314

Query: 1346 IYNRGGVIYLFRGRNYNYKSRPRFPLMLWKPVTPVYPRLIQRVPEGLTLEEANDMRKRGS 1167
            IY RGGVI+LFRGRNYN+++RPRFPLMLWKPV PVYPRLIQ+VPEGLT +EA +MR++G 
Sbjct: 315  IYRRGGVIFLFRGRNYNHRTRPRFPLMLWKPVAPVYPRLIQQVPEGLTRQEATEMRRKGR 374

Query: 1166 YLTPICKLAKNGVYCDLVKNVREAFEACELVRINCQGLNPSDYKKIGAKLKDLVPCVLLS 987
             L PICKL KNGVYCDLVKNV+EAFE CELVRI+CQG+  SD++KIGAKLKDLVPCVL+S
Sbjct: 375  ELMPICKLGKNGVYCDLVKNVKEAFEVCELVRIDCQGMKGSDFRKIGAKLKDLVPCVLIS 434

Query: 986  FECEHILVWRGRDWQ-SLLEPDESLKGLQEVKDDDVAXXXXXXXXXXXXXLCIMEDKPND 810
            FE E IL+WRGR+W+ SL  PD         K DD+                       D
Sbjct: 435  FENEQILIWRGREWKSSLTTPD---------KKDDIL---------------------GD 464

Query: 809  LEISLS-PTYSNEESQGNSEYTEVEAEDIIAKVPDAPVIASHAVLNGDGIIDESEKSPVF 633
            +E+  + P   ++E+  +   T+V  +       ++P+ +            ++++S V 
Sbjct: 465  IEVDTALPEGDDDEASESPNQTQVVTQ-------NSPLGSKEL---------QNDQSAVD 508

Query: 632  PGSFYGDPSEAFNQTVGNDATLENTERAATVLNYTKNADEEMNLSSVPCTEGILLLREQA 453
              +  G  S   + +   D +L + +         +   EE+N  S+   E +L L +QA
Sbjct: 509  ILAMEGRNSSLQSSSTERDNSLGDHQE-------PEEESEEINTQSI---ERVLNLMKQA 558

Query: 452  VENGMALVLDDHNLDADTVFKKSVDFAKTAPTGPVFSLQRKQLAVQKNKEQERD---DNS 282
            VE+G A+VL+  +LDADTVF KSV F+  A  GPVF    ++  + K +E  R+    N 
Sbjct: 559  VESGNAIVLEATDLDADTVFAKSVAFSSVATPGPVFQHGLRKEPMVKKQENHREFGYQNL 618

Query: 281  GSKEKEAGAALGTEVTVPGRRNERKTSR--NEKLKDIKADYLNVVPQGNLRIDELAKLLA 108
             +K      +   EV V   R+E+K      +KL++   DY  V+P G L++DELAKLLA
Sbjct: 619  EAKTSNVVFSREKEVAVGVERDEKKEKEGLKKKLEEFDEDYREVIPHGTLKVDELAKLLA 678


>ref|XP_006297110.1| hypothetical protein CARUB_v10013113mg [Capsella rubella]
            gi|482565819|gb|EOA30008.1| hypothetical protein
            CARUB_v10013113mg [Capsella rubella]
          Length = 689

 Score =  598 bits (1542), Expect = e-168
 Identities = 335/716 (46%), Positives = 436/716 (60%), Gaps = 7/716 (0%)
 Frame = -3

Query: 2234 RLPTEIRFSRWNNANAQKFIRHDRNQKELEDQIRIEKRFDSALTIAHNYNPAPPHPTTFX 2055
            R P+EIRFSRW NANA++F +  R+Q+ELE +IR ++RFD+A  I H       H +   
Sbjct: 23   RAPSEIRFSRWGNANAERFEQRRRSQEELEAEIRRDRRFDAATKIVHT------HDSDAA 76

Query: 2054 XXXXXXXXXXXXXXXXXXXXXKTPSRKTLH--PAFKPLPRPRKIPVNENETEKSSGLNFR 1881
                                   P R++ +  P   P     K  V ++  +  +    +
Sbjct: 77   ASESKTSPFRSRGTPSLPSARSIPGRRSKYSKPDSGPNKPKNKPRVPDSPPQLDAKAEVK 136

Query: 1880 IDENGVSYEIPEAPFVYQYSYTETPKVKPVKLREPLVSPFGPGTMAKPWLGRXXXXXXXX 1701
            + E+G+SY I  APF ++YSYTETPKVKP+KLREP  +PFGP TM +PW GR        
Sbjct: 137  LSEDGLSYVINGAPFEFKYSYTETPKVKPLKLREPAYAPFGPTTMGRPWTGRAPLPQSQK 196

Query: 1700 XXPEFDSFQLPPPHKKGVKPVQAPGPFLPGSGPKYVRSREEVLGTPLTKEEIEELIKGSK 1521
               +FDSF+LPP  KKGVKPVQ PGPF PG GP+YV ++EE+LG PLTKEEI EL+    
Sbjct: 197  TPRDFDSFRLPPVGKKGVKPVQKPGPFRPGIGPRYVYTKEEILGEPLTKEEIRELVTSCL 256

Query: 1520 KSNRQLNMGRDGLTHNMLDNIHALWKRRRVCKIKCKGVCTVDMDNVCQQLEEKTGGKIIY 1341
            K+ RQLNMGRDGLTHNML+NIH LWKRRRVCKIKCKGVCTVDMDN+C+QLEEK GGK+IY
Sbjct: 257  KTTRQLNMGRDGLTHNMLNNIHDLWKRRRVCKIKCKGVCTVDMDNICEQLEEKIGGKVIY 316

Query: 1340 NRGGVIYLFRGRNYNYKSRPRFPLMLWKPVTPVYPRLIQRVPEGLTLEEANDMRKRGSYL 1161
             RGGV++LFRGRNYN+++RPRFPLMLWKPV PVYP+LIQ+VPEGLT  EA +MR++G  L
Sbjct: 317  RRGGVLFLFRGRNYNHRTRPRFPLMLWKPVAPVYPKLIQQVPEGLTRLEATEMRRKGREL 376

Query: 1160 TPICKLAKNGVYCDLVKNVREAFEACELVRINCQGLNPSDYKKIGAKLKDLVPCVLLSFE 981
             PICKL KNGVYCDLVKNV+EAFE CELVRI+CQGL  SD++KIGAKLKDLVPCVL+SFE
Sbjct: 377  MPICKLGKNGVYCDLVKNVKEAFEVCELVRIDCQGLKASDFRKIGAKLKDLVPCVLISFE 436

Query: 980  CEHILVWRGRDWQ-SLLEPDESLKGLQEVKDDDVAXXXXXXXXXXXXXLCIMEDKPNDLE 804
             E IL+WRGR+W+ SL  PD+        KDD +                       D+E
Sbjct: 437  NEQILIWRGREWKSSLTTPDK--------KDDYL----------------------RDIE 466

Query: 803  ISLSPTYSNEESQGNSEYTEVEAEDIIAKVPDAPVIASHAVLNGDGIIDESEKSPVFPGS 624
            +  +    +E S  +   T ++         ++P+ +  +  N DG     + SP     
Sbjct: 467  VDTALPEDDEPSSPDQPQTVIQ---------NSPLGSMESQNNPDG----HDLSPSTVDF 513

Query: 623  FYGDPSEAFNQTVGNDATLENTERAATVLNYTKNADEEMNLSSVPCTEGILLLREQAVEN 444
               + + +  +++  D T    + +       +   E+    S    E +L L  QAVE+
Sbjct: 514  LAMEGTSSSLRSLSTDVTELTADSSLGDDQEPEPEPEKSEEISKQSIERVLNLMNQAVES 573

Query: 443  GMALVLDDHNLDADTVFKKSVDFAKTAPTGPVFSL-QRKQLAVQKNKEQERDDNS-GSKE 270
            G ALVLD   LDADTVF K+V F+  A  GP F    RKQ  V+K +++E    S  +K 
Sbjct: 574  GTALVLDSTELDADTVFAKAVAFSAVAAPGPAFQHGLRKQPMVKKQEKRESGYRSVEAKV 633

Query: 269  KEAGAALGTEVTVPGRRNERKT--SRNEKLKDIKADYLNVVPQGNLRIDELAKLLA 108
                  +  EV    +R E++      +K+ +   DY  V+P G L++DELAKLLA
Sbjct: 634  SNVVVTVKKEVAFSVKREEKEEEGGLKKKIDEFDEDYREVLPHGTLKVDELAKLLA 689


>ref|XP_004503464.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associated factor 1,
            chloroplastic-like [Cicer arietinum]
          Length = 706

 Score =  594 bits (1531), Expect = e-167
 Identities = 333/670 (49%), Positives = 414/670 (61%), Gaps = 47/670 (7%)
 Frame = -3

Query: 1979 RKTLHPAFKPLPRPR----KIPVNENETEKSSGLNFRIDENGVSYEIPEAPFVYQYSYTE 1812
            R T  P   P   P      IP   ++    +  N +I ++G+SY I  APF ++YSYTE
Sbjct: 38   RPTTKPKLDPQSHPALKFSNIPKQTSKPVSKASENVKISDDGLSYVIEGAPFEFKYSYTE 97

Query: 1811 TPKVKPVKLREPLVSPFGPGTMAKPWLGRXXXXXXXXXXPEFDSFQLPPPHKKGVKPVQA 1632
            TPK KP+KLREP   PFGP TM +PW GR           EFDSF LPPPHKKGVKPVQ+
Sbjct: 98   TPKAKPLKLREPGFLPFGPVTMPRPWTGRPPLPPSKKKLKEFDSFVLPPPHKKGVKPVQS 157

Query: 1631 PGPFLPGSGPKYVRSREEVLGTPLTKEEIEELIKGSKKSNRQLNMGRDGLTHNMLDNIHA 1452
            PGP+LPG+ PKYVRSREEVLG PLTKEEI+ L++   KS+RQLNMGRDG THNMLDNIHA
Sbjct: 158  PGPYLPGTSPKYVRSREEVLGEPLTKEEIKVLVQSCLKSSRQLNMGRDGFTHNMLDNIHA 217

Query: 1451 LWKRRRVCKIKCKGVCTVDMDNVCQQLEEKTGGKIIYNRGGVIYLFRGRNYNYKSRPRFP 1272
             WKRRRVCKIKC GVCTVDMDNVC QLEEKTGGK+IY RGGV+YLFRGRNYNYK+RP FP
Sbjct: 218  HWKRRRVCKIKCLGVCTVDMDNVCHQLEEKTGGKVIYRRGGVLYLFRGRNYNYKTRPLFP 277

Query: 1271 LMLWKPVTPVYPRLIQRVPEGLTLEEANDMRKRGSYLTPICKLAKNGVYCDLVKNVREAF 1092
            LMLWKPV PVYP+LIQRVPEGLTLEEA +MR++G  LTPICK+ KNGVY +LVKNVREAF
Sbjct: 278  LMLWKPVPPVYPKLIQRVPEGLTLEEATEMRQKGRTLTPICKIGKNGVYFNLVKNVREAF 337

Query: 1091 EACELVRINCQGLNPSDYKKIGAKLKDLVPCVLLSFECEHILVWRGRDWQSLLE------ 930
            E CELVRINCQGLN SDY+KIGAKL+DLVPC LLS+E EHIL+WRGR+W+  L       
Sbjct: 338  EECELVRINCQGLNKSDYRKIGAKLRDLVPCTLLSYENEHILMWRGRNWKPSLPDLRDDR 397

Query: 929  ----------------PDESLKGLQEVKDDDVAXXXXXXXXXXXXXLCIMEDKPNDLEIS 798
                            P E+L        ++ A              C+ +   + +E+ 
Sbjct: 398  KEANKVDPDNKNYKALPSEALDVSAPNLHNNPAELVSNLSHDTSISFCLDDVTVDKVEVP 457

Query: 797  LSPTYSNEESQ---GNSEYTEV------EAEDIIAKVPDAPVI--ASHAVLNGDGIIDES 651
              PT +++ S     ++E T V      E E   +  P   +     H     + + D  
Sbjct: 458  -CPTKNSKRSMSVIADAEITNVATDSYGEPEPCRSTSPGTNISHDGGHITCPSNAMSDNH 516

Query: 650  EKSPVFPGSFYGDPSEAFNQTVGNDATLENTE---------RAATVLNYTKNAD-EEMNL 501
            E   +                 G+DA L +++         RA  +L+ +   D   ++ 
Sbjct: 517  EMLDINIMDDKSFSDRLSTSISGSDAMLGSSDSNIYGMVDPRADELLDDSGATDVSPLSR 576

Query: 500  SSVPCTEGILLLREQAVENGMALVLDDHNLDADTVFKKSVDFAKTAPTGPVFSLQRKQLA 321
            S+VPC + I LL EQAVE G ALVLD  +LDAD +++ +V FAK+AP GPVF   RK + 
Sbjct: 577  SAVPCMKEISLLLEQAVEQGSALVLDKDSLDADNIYQTTVSFAKSAPLGPVFMKHRK-VV 635

Query: 320  VQKNKEQERDDNSGSKEKEAGAALGTEVTVPGRRNERKTSRNEKLKDIKADYLNVVPQGN 141
            VQK  +QE   +  S ++EA      E T    + +R+ S   + ++    + NVVPQG 
Sbjct: 636  VQKRVKQEAPTSEISDKQEARTLKTRETTAVTTKGKRENSPIRRRENFDERFQNVVPQGT 695

Query: 140  LRIDELAKLL 111
            L +DELAKLL
Sbjct: 696  LGVDELAKLL 705


>ref|XP_003630745.1| CRS2-associated factor [Medicago truncatula]
            gi|355524767|gb|AET05221.1| CRS2-associated factor
            [Medicago truncatula]
          Length = 698

 Score =  590 bits (1521), Expect = e-166
 Identities = 334/671 (49%), Positives = 415/671 (61%), Gaps = 52/671 (7%)
 Frame = -3

Query: 1967 HPA--FKPLPRPRKIPVNENETEKSSGLNFRIDENGVSYEIPEAPFVYQYSYTETPKVKP 1794
            HPA  F  +P+ +  PVN+         N +I E+GVSY I  APF ++YSYTETPK KP
Sbjct: 41   HPALKFSNIPKQKLKPVNKTPE------NVKISEDGVSYVIEGAPFEFKYSYTETPKSKP 94

Query: 1793 VKLREPLVSPFGPGTMAKPWLGRXXXXXXXXXXPEFDSFQLPPPHKKGVKPVQAPGPFLP 1614
            V++REP   PFGP TM +PW GR           EFDSF LPPPHKKGVKPVQ+PGPFLP
Sbjct: 95   VQMREPPFVPFGPVTMPRPWTGRPPLPPSKKKLKEFDSFVLPPPHKKGVKPVQSPGPFLP 154

Query: 1613 GSGPKYVRSREEVLGTPLTKEEIEELIKGSKKSNRQLNMGRDGLTHNMLDNIHALWKRRR 1434
            G+ P+YV SREEVLG PLTKEEI EL++ + KS+RQLN+GRDG  HNMLDNIHA WKRRR
Sbjct: 155  GTSPRYVMSREEVLGEPLTKEEINELVRSTLKSSRQLNLGRDGFIHNMLDNIHAHWKRRR 214

Query: 1433 VCKIKCKGVCTVDMDNVCQQLEEKTGGKIIYNRGGVIYLFRGRNYNYKSRPRFPLMLWKP 1254
            VCKIKC GVCTVDMDNVCQQLEEKTGGK+IY RGGVIYLFRGRNYN+K+RPRFPLMLWKP
Sbjct: 215  VCKIKCIGVCTVDMDNVCQQLEEKTGGKVIYRRGGVIYLFRGRNYNHKTRPRFPLMLWKP 274

Query: 1253 VTPVYPRLIQRVPEGLTLEEANDMRKRGSYLTPICKLAKNGVYCDLVKNVREAFEACELV 1074
            V PVYPRLIQ+VPEGLTLEEA +MR++G  LTPICKL KNGVY +LV NVREAFE CELV
Sbjct: 275  VPPVYPRLIQQVPEGLTLEEATEMRQKGRTLTPICKLGKNGVYYNLVNNVREAFEECELV 334

Query: 1073 RINCQGLNPSDYKKIGAKLKDLVPCVLLSFECEHILVWRGRDWQSLLEPD------ESLK 912
            R+NCQGLN SDY+KIGAKL+DLVPC LLS+E EHIL+WRGR+W+S   PD      E+ K
Sbjct: 335  RVNCQGLNKSDYRKIGAKLRDLVPCTLLSYENEHILMWRGRNWKSSF-PDLVEDFKEATK 393

Query: 911  GLQEVKDDDVAXXXXXXXXXXXXXLCIMEDKPN---DLEISLSPTYSNEE-----SQGNS 756
               + K+D                   +E   N   D  IS  P     +     ++ + 
Sbjct: 394  ADADNKNDKTLQSEALDVSTPSLNHNPVEHVSNLSHDTSISFCPDDVTVDKVPCPTKNSK 453

Query: 755  EYTEVEAEDIIAKVPDAPVI-------------------------ASHAVLNGDGIIDES 651
            +   V A+  + KV +A                            + H     + I D  
Sbjct: 454  QSMSVVADASLTKVYEAETTNVATDSYGEPESCSNTSPGMTISHDSRHTECPSNAISDSH 513

Query: 650  EKSPVFPGSFYGDPSEAFNQTVGNDATLENTERAATVLNYTKNADEEMNLS--------- 498
              S +     +GD     + ++     +  +  +        +ADE +N S         
Sbjct: 514  GTSDIMDDKGFGD---CLSTSISGSNAMLGSRNSNIYGTVDPHADELLNDSGAADVSPLP 570

Query: 497  --SVPCTEGILLLREQAVENGMALVLDDHNLDADTVFKKSVDFAKTAPTGPVFSLQRKQL 324
              + P  +GI LL EQAVE G ALVLD  +LDAD V++ +V FA++AP GPVF   RK +
Sbjct: 571  RAAAPFMKGISLLLEQAVEQGNALVLDKDSLDADNVYRTTVSFAQSAPPGPVFMKHRK-V 629

Query: 323  AVQKNKEQERDDNSGSKEKEAGAALGTEVTVPGRRNERKTSRNEKLKDIKADYLNVVPQG 144
            AVQK+ +QE      ++E       GT V   G+R   ++ R  + ++    ++N+VPQG
Sbjct: 630  AVQKSDKQEA-LTPETRETTTVTTKGTTVATKGKR--ERSPRIRRKENFDERFMNLVPQG 686

Query: 143  NLRIDELAKLL 111
             L +DELAKLL
Sbjct: 687  TLGVDELAKLL 697


>ref|XP_006494323.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Citrus
            sinensis]
          Length = 837

 Score =  574 bits (1480), Expect = e-161
 Identities = 282/462 (61%), Positives = 335/462 (72%), Gaps = 12/462 (2%)
 Frame = -3

Query: 2237 HRLPTEIRFSRWNNANAQKFIRHDRNQKELEDQIRIEKRFDSALTIAHNYNPAPPHPTTF 2058
            HR  TEIRFSRWNNANA++F +  R Q+E+ED IR  +RFDSA  I  +Y+ +    T  
Sbjct: 29   HRPATEIRFSRWNNANAEEFNQRRRAQQEIEDDIRRHRRFDSATKITQSYDSSTSTATN- 87

Query: 2057 XXXXXXXXXXXXXXXXXXXXXXKTPSRKTL-----------HPAFKPLPRPRKIPVNENE 1911
                                    P RK+            HPAF+ + +  K      E
Sbjct: 88   ------GVAFKSAGTPSSPSRPSIPGRKSKYSKPATNSSVDHPAFRKISKREKTTNKSPE 141

Query: 1910 TEKSSGLNFRIDENGVSYEIPEAPFVYQYSYTETPKVKPVKLREPLVSPFGPGTMAKPWL 1731
               +S  N  I E+G+SY I  APF ++YSYTE PK KP+KLRE   SPFGP TM +PW 
Sbjct: 142  KPAASKSNISITEDGLSYVIDGAPFEFKYSYTEAPKAKPLKLREAAFSPFGPTTMGRPWT 201

Query: 1730 GRXXXXXXXXXXPEFDSFQLPPPHKKGVKPVQAPGPFLPGSGPKYVRSREEVLGTPLTKE 1551
            GR           EFDSFQLPPP+KKGVKPVQ PGP+LPG+GP+YV +REE+LG PLT E
Sbjct: 202  GRAPLPPSKKKLKEFDSFQLPPPNKKGVKPVQKPGPYLPGTGPRYVSTREEILGEPLTAE 261

Query: 1550 EIEELIKGSKKSNRQLNMGRDGLTHNMLDNIHALWKRRRVCKIKCKGVCTVDMDNVCQQL 1371
            E+ EL++  K+S+RQLNMGRDGLTHNMLDNIHA WKRRR CKIKCKGVCTVDMDNVC+QL
Sbjct: 262  EVRELVESVKRSSRQLNMGRDGLTHNMLDNIHAHWKRRRACKIKCKGVCTVDMDNVCEQL 321

Query: 1370 EEKTGGKIIYNRGGVIYLFRGRNYNYKSRPRFPLMLWKPVTPVYPRLIQRVPEGLTLEEA 1191
            EE+TGGKIIY RGGV+YLFRGRNYNY++RP FPLMLWKP+TPVYPRLIQ+VP+GLTLEEA
Sbjct: 322  EERTGGKIIYRRGGVLYLFRGRNYNYRNRPHFPLMLWKPITPVYPRLIQQVPDGLTLEEA 381

Query: 1190 NDMRKRGSYLTPICKLAKNGVYCDLVKNVREAFEACELVRINCQGLNPSDYKKIGAKLKD 1011
             +MRK+G  L PICKL KNGVYCDL KNVREAFE CELVRINCQG+N SDY+KIGAKL+D
Sbjct: 382  TEMRKKGRKLIPICKLGKNGVYCDLAKNVREAFEVCELVRINCQGMNGSDYRKIGAKLRD 441

Query: 1010 LVPCVLLSFECEHILVWRGRDWQ-SLLEPDESLKGLQEVKDD 888
            LVPCVL+SFE EHIL+WRG++W+ S+L+P    +  +E K D
Sbjct: 442  LVPCVLISFEREHILMWRGQEWKSSILKPGNDSEDAKESKVD 483



 Score = 94.4 bits (233), Expect = 2e-16
 Identities = 66/180 (36%), Positives = 101/180 (56%), Gaps = 19/180 (10%)
 Frame = -3

Query: 590  TVGNDATLENTERAATVLNY----TKNADEEMNLSSVP------------CTEGILLLRE 459
            +VG++ TL + E       +    + N D + N S VP              E +L L  
Sbjct: 664  SVGSETTLGSAESTRDQSEHFYVGSLNHDYQQNPSEVPEDHNVLTRLHGPSLEIVLHLMR 723

Query: 458  QAVENGMALVLDDHNLDADTVFKKSVDFAKTAPTGPVFSLQRKQLAVQKNKEQERDDNSG 279
            QAVENG A+VLDD  LDAD+++++SV FAK+AP GPVF  + +++A+QK +++E      
Sbjct: 724  QAVENGSAVVLDDATLDADSIYERSVAFAKSAPPGPVFQQRSRKIAIQKGEKKEAGHLKM 783

Query: 278  SKEKEAGAALGTEVTVPGRRNERKTSRNEKLKDIKADY-LNVV--PQGNLRIDELAKLLA 108
             +E      +   V    R N R+++R +     + ++ L+VV  PQG+L+IDELAKLLA
Sbjct: 784  KRE------VPNMVVSENRGNVRQSNRKKTKNSDEIEHGLDVVLSPQGSLKIDELAKLLA 837


>ref|XP_006451251.1| hypothetical protein CICLE_v100106541mg, partial [Citrus clementina]
            gi|557554477|gb|ESR64491.1| hypothetical protein
            CICLE_v100106541mg, partial [Citrus clementina]
          Length = 825

 Score =  574 bits (1480), Expect = e-161
 Identities = 282/462 (61%), Positives = 335/462 (72%), Gaps = 12/462 (2%)
 Frame = -3

Query: 2237 HRLPTEIRFSRWNNANAQKFIRHDRNQKELEDQIRIEKRFDSALTIAHNYNPAPPHPTTF 2058
            HR  TEIRFSRWNNANA++F +  R Q+E+ED IR  +RFDSA  I  +Y+ +    T  
Sbjct: 35   HRPATEIRFSRWNNANAEEFNQRRRAQQEIEDDIRRHRRFDSATKITQSYDSSTSTATN- 93

Query: 2057 XXXXXXXXXXXXXXXXXXXXXXKTPSRKTL-----------HPAFKPLPRPRKIPVNENE 1911
                                    P RK+            HPAF+ + +  K      E
Sbjct: 94   ------GVAFKSAGTPSSPSRPSIPGRKSKYSKPATNSSVDHPAFRKISKREKTTNKSPE 147

Query: 1910 TEKSSGLNFRIDENGVSYEIPEAPFVYQYSYTETPKVKPVKLREPLVSPFGPGTMAKPWL 1731
               +S  N  I E+G+SY I  APF ++YSYTE PK KP+KLRE   SPFGP TM +PW 
Sbjct: 148  KPAASKSNISITEDGLSYVIDGAPFEFKYSYTEAPKAKPLKLREAAFSPFGPTTMGRPWT 207

Query: 1730 GRXXXXXXXXXXPEFDSFQLPPPHKKGVKPVQAPGPFLPGSGPKYVRSREEVLGTPLTKE 1551
            GR           EFDSFQLPPP+KKGVKPVQ PGP+LPG+GP+YV +REE+LG PLT E
Sbjct: 208  GRAPLPPSKKKLKEFDSFQLPPPNKKGVKPVQKPGPYLPGTGPRYVSTREEILGEPLTAE 267

Query: 1550 EIEELIKGSKKSNRQLNMGRDGLTHNMLDNIHALWKRRRVCKIKCKGVCTVDMDNVCQQL 1371
            E+ EL++  K+S+RQLNMGRDGLTHNMLDNIHA WKRRR CKIKCKGVCTVDMDNVC+QL
Sbjct: 268  EVRELVESVKRSSRQLNMGRDGLTHNMLDNIHAHWKRRRACKIKCKGVCTVDMDNVCEQL 327

Query: 1370 EEKTGGKIIYNRGGVIYLFRGRNYNYKSRPRFPLMLWKPVTPVYPRLIQRVPEGLTLEEA 1191
            EE+TGGKIIY RGGV+YLFRGRNYNY++RP FPLMLWKP+TPVYPRLIQ+VP+GLTLEEA
Sbjct: 328  EERTGGKIIYRRGGVLYLFRGRNYNYRNRPHFPLMLWKPITPVYPRLIQQVPDGLTLEEA 387

Query: 1190 NDMRKRGSYLTPICKLAKNGVYCDLVKNVREAFEACELVRINCQGLNPSDYKKIGAKLKD 1011
             +MRK+G  L PICKL KNGVYCDL KNVREAFE CELVRINCQG+N SDY+KIGAKL+D
Sbjct: 388  TEMRKKGRKLIPICKLGKNGVYCDLAKNVREAFEVCELVRINCQGMNGSDYRKIGAKLRD 447

Query: 1010 LVPCVLLSFECEHILVWRGRDWQ-SLLEPDESLKGLQEVKDD 888
            LVPCVL+SFE EHIL+WRG++W+ S+L+P    +  +E K D
Sbjct: 448  LVPCVLISFEREHILMWRGQEWKSSILKPGNDSEDAKESKVD 489



 Score = 74.7 bits (182), Expect = 2e-10
 Identities = 44/114 (38%), Positives = 67/114 (58%), Gaps = 16/114 (14%)
 Frame = -3

Query: 590  TVGNDATLENTERAATVLNY----TKNADEEMNLSSVP------------CTEGILLLRE 459
            +VG++ TL + E       +    + N D + N S VP              E +L L  
Sbjct: 670  SVGSETTLGSAESTRDQSEHFYVGSLNHDYQQNPSEVPEDHNVLTRLHGPSLEIVLHLMR 729

Query: 458  QAVENGMALVLDDHNLDADTVFKKSVDFAKTAPTGPVFSLQRKQLAVQKNKEQE 297
            QAVENG A+VLDD  LDAD+++++SV FAK+AP GPVF  + +++A+QK +++E
Sbjct: 730  QAVENGSAVVLDDATLDADSIYERSVAFAKSAPPGPVFQQRSRKIAIQKGEKKE 783