BLASTX nr result
ID: Rehmannia23_contig00020723
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00020723
(954 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006339746.1| PREDICTED: pentatricopeptide repeat-containi... 62 2e-07
ref|XP_004230005.1| PREDICTED: pentatricopeptide repeat-containi... 62 3e-07
ref|XP_002301427.2| hypothetical protein POPTR_0002s17640g [Popu... 60 9e-07
gb|EOX95636.1| Pentatricopeptide repeat (PPR) superfamily protei... 60 1e-06
ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containi... 59 2e-06
emb|CAN66974.1| hypothetical protein VITISV_022076 [Vitis vinifera] 59 2e-06
ref|XP_004155716.1| PREDICTED: pentatricopeptide repeat-containi... 59 3e-06
ref|XP_004142577.1| PREDICTED: pentatricopeptide repeat-containi... 59 3e-06
>ref|XP_006339746.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Solanum tuberosum]
Length = 508
Score = 62.4 bits (150), Expect = 2e-07
Identities = 46/154 (29%), Positives = 78/154 (50%), Gaps = 10/154 (6%)
Frame = -1
Query: 516 KARKHGCLVDLQAALNSCKKLMCLCSMQTVPMKP-ILLCVTLLRACT-SWNSRMGFRSWK 343
K +GC+VDL ++ L +Q++PM+P ++ TLL AC+ N + ++ +
Sbjct: 352 KLEHYGCMVDLLGRAGKLQEAYDL--IQSIPMRPDCVIWGTLLGACSFHGNVELAEKAAE 409
Query: 342 LLFKLDPLNLDNISIFYDCYAKADGWDGSVKLRKLLNGTNITKGSL*LQEPDFKSCHLG* 163
L L+P N N I + YA+ WDG +LRKL+ + ITK + + H
Sbjct: 410 FLSVLEPWNPGNYVILSNIYARTGRWDGVARLRKLMKSSQITKAAGYSFIEEGGDIHKFI 469
Query: 162 LD--------QIFAVLDNITVEMKFHKITVDIRL 85
++ +I+++LD +T +KF T+DI L
Sbjct: 470 VEDKSHPKSNEIYSLLDLVTTRLKFDVSTMDIDL 503
>ref|XP_004230005.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Solanum lycopersicum]
Length = 508
Score = 62.0 bits (149), Expect = 3e-07
Identities = 45/154 (29%), Positives = 80/154 (51%), Gaps = 10/154 (6%)
Frame = -1
Query: 516 KARKHGCLVDLQAALNSCKKLMCLCSMQTVPMKP-ILLCVTLLRACTSW-NSRMGFRSWK 343
K +GC+VDL ++ L +Q++PM+P ++ T+L AC+ + N + ++ +
Sbjct: 352 KLEHYGCMVDLLGRAGKLQEAYDL--IQSMPMRPDCVIWGTILGACSFYGNVELAEKAAE 409
Query: 342 LLFKLDPLNLDNISIFYDCYAKADGWDGSVKLRKLLNGTNITKGSL*LQEPDFKSCHLG* 163
L L+P N N I + YA+A WDG +LRKL+ + ITK + + H
Sbjct: 410 FLSVLEPWNPGNYVILSNIYARAGRWDGVARLRKLMKSSQITKAAGYSFIEEGGDIHKFI 469
Query: 162 LD--------QIFAVLDNITVEMKFHKITVDIRL 85
++ +I+++LD +T +KF T++I L
Sbjct: 470 VEDKSHPKSNEIYSLLDLVTTRLKFDVSTMEIDL 503
>ref|XP_002301427.2| hypothetical protein POPTR_0002s17640g [Populus trichocarpa]
gi|550345235|gb|EEE80700.2| hypothetical protein
POPTR_0002s17640g [Populus trichocarpa]
Length = 514
Score = 60.5 bits (145), Expect = 9e-07
Identities = 40/106 (37%), Positives = 61/106 (57%), Gaps = 3/106 (2%)
Frame = -1
Query: 516 KARKHGCLVDLQAALNSCKKLMCLCSMQTVPMKP-ILLCVTLLRACTSWNSRMGFR--SW 346
K +GC+VDL ++ L ++++PMKP ++ TLL AC S++S + F +
Sbjct: 352 KLEHYGCMVDLLGRAGELQEAYDL--VKSMPMKPDSVIWGTLLGAC-SFHSNVEFAEIAA 408
Query: 345 KLLFKLDPLNLDNISIFYDCYAKADGWDGSVKLRKLLNGTNITKGS 208
+ LF+++P N N I + YA A WDG KLRKL+ G ITK +
Sbjct: 409 ESLFQVEPWNPGNYVILCNIYASAQRWDGVAKLRKLMKGGQITKAA 454
>gb|EOX95636.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
[Theobroma cacao]
Length = 515
Score = 60.1 bits (144), Expect = 1e-06
Identities = 45/156 (28%), Positives = 76/156 (48%), Gaps = 15/156 (9%)
Frame = -1
Query: 516 KARKHGCLVDLQAALNSCKKLMCLCSMQTVPMKP-ILLCVTLLRACTSWNS-RMGFRSWK 343
K +GC+VDL + ++ L ++++PMKP ++ LL AC+ N+ + ++ +
Sbjct: 354 KLEHYGCMVDLLGRSGALQEAYDL--IKSMPMKPDAVVWGALLGACSFHNNVELAEKAAQ 411
Query: 342 LLFKLDPLNLDNISIFYDCYAKADGWDGSVKLRKLLNGTNITKGS-------------L* 202
LF+L+P N N I + YA WDG KLRKL+ G ITK +
Sbjct: 412 PLFQLEPWNAGNYVILSNIYASWGWWDGVAKLRKLMKGGQITKAAGYSFIEEGGRMHKFI 471
Query: 201 LQEPDFKSCHLG*LDQIFAVLDNITVEMKFHKITVD 94
+++ C D+I+ +LD ++ MK +D
Sbjct: 472 VEDKSHPRC-----DEIYQILDQVSRVMKLQDKLMD 502
>ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Vitis vinifera]
Length = 512
Score = 59.3 bits (142), Expect = 2e-06
Identities = 46/146 (31%), Positives = 75/146 (51%), Gaps = 10/146 (6%)
Frame = -1
Query: 516 KARKHGCLVDLQAALNSCKKLMCLCSMQTVPMKP-ILLCVTLLRACT-SWNSRMGFRSWK 343
K +GC+VDL ++ L + +PM+P ++ TLL AC+ + + ++
Sbjct: 352 KLEHYGCMVDLLGRAGELREAHDL--ILRMPMEPDSVVWGTLLGACSFHGHVELAEKAAG 409
Query: 342 LLFKLDPLNLDNISIFYDCYAKADGWDGSVKLRKLLNGTNITK--GSL*LQEPD------ 187
LF+L+P N N I + YA A WDG +LRKL+ G ITK G ++E
Sbjct: 410 ALFELEPSNPGNYVILSNIYATAGRWDGVARLRKLMKGGKITKAAGYSFIEEGGHIHKFI 469
Query: 186 FKSCHLG*LDQIFAVLDNITVEMKFH 109
+ D+I+A+LD ++++MK H
Sbjct: 470 VEDRSHSRSDEIYALLDEVSMKMKLH 495
>emb|CAN66974.1| hypothetical protein VITISV_022076 [Vitis vinifera]
Length = 967
Score = 59.3 bits (142), Expect = 2e-06
Identities = 46/146 (31%), Positives = 75/146 (51%), Gaps = 10/146 (6%)
Frame = -1
Query: 516 KARKHGCLVDLQAALNSCKKLMCLCSMQTVPMKP-ILLCVTLLRACT-SWNSRMGFRSWK 343
K +GC+VDL ++ L + +PM+P ++ TLL AC+ + + ++
Sbjct: 807 KLEHYGCMVDLLGRAGELREAHDL--ILRMPMEPDSVVWGTLLGACSFHGHVELAEKAAG 864
Query: 342 LLFKLDPLNLDNISIFYDCYAKADGWDGSVKLRKLLNGTNITK--GSL*LQEPD------ 187
LF+L+P N N I + YA A WDG +LRKL+ G ITK G ++E
Sbjct: 865 ALFELEPSNPGNYVILSNIYATAGRWDGVARLRKLMKGGKITKAAGYSFIEEGGHIHKFI 924
Query: 186 FKSCHLG*LDQIFAVLDNITVEMKFH 109
+ D+I+A+LD ++++MK H
Sbjct: 925 VEDRSHSRSDEIYALLDEVSMKMKLH 950
>ref|XP_004155716.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Cucumis sativus]
Length = 512
Score = 58.9 bits (141), Expect = 3e-06
Identities = 39/103 (37%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
Frame = -1
Query: 516 KARKHGCLVDLQAALNSCKKLMCLCSMQTVPMKP-ILLCVTLLRACT-SWNSRMGFRSWK 343
K +GCLVDL ++ L +Q +PM P ++ TLL AC+ N +G + +
Sbjct: 352 KLEHYGCLVDLLGRAGELQEAYNL--IQNMPMAPDSVIWGTLLGACSFHGNVELGEVAAE 409
Query: 342 LLFKLDPLNLDNISIFYDCYAKADGWDGSVKLRKLLNGTNITK 214
LFKL+P N N I + YA A W G +LRK++ G +ITK
Sbjct: 410 SLFKLEPWNPGNYVILSNIYALAGDWSGVARLRKMMKGGHITK 452
>ref|XP_004142577.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Cucumis sativus]
Length = 589
Score = 58.9 bits (141), Expect = 3e-06
Identities = 39/103 (37%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
Frame = -1
Query: 516 KARKHGCLVDLQAALNSCKKLMCLCSMQTVPMKP-ILLCVTLLRACT-SWNSRMGFRSWK 343
K +GCLVDL ++ L +Q +PM P ++ TLL AC+ N +G + +
Sbjct: 352 KLEHYGCLVDLLGRAGELQEAYNL--IQNMPMAPDSVIWGTLLGACSFHGNVELGEVAAE 409
Query: 342 LLFKLDPLNLDNISIFYDCYAKADGWDGSVKLRKLLNGTNITK 214
LFKL+P N N I + YA A W G +LRK++ G +ITK
Sbjct: 410 SLFKLEPWNPGNYVILSNIYALAGDWSGVARLRKMMKGGHITK 452