BLASTX nr result

ID: Rehmannia23_contig00020712 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00020712
         (403 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283770.1| PREDICTED: uncharacterized protein LOC100243...    72   1e-10
ref|XP_006472450.1| PREDICTED: RNA-binding protein FUS-like [Cit...    61   2e-07
ref|XP_006433813.1| hypothetical protein CICLE_v10001506mg [Citr...    60   3e-07
ref|XP_006366423.1| PREDICTED: heterogeneous nuclear ribonucleop...    59   5e-07

>ref|XP_002283770.1| PREDICTED: uncharacterized protein LOC100243767 [Vitis vinifera]
           gi|302142075|emb|CBI19278.3| unnamed protein product
           [Vitis vinifera]
          Length = 347

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 46/130 (35%), Positives = 51/130 (39%), Gaps = 8/130 (6%)
 Frame = +3

Query: 24  PTPVYHYPPVNSPGQRIYQAPAAHFHQSPVRSPMGPASPLGGPHENPPTAWRGSGGAFNY 203
           P+P   + P  SPGQ I QA   +    P RSP+  ASP    H+  P  W GS G   Y
Sbjct: 117 PSPNPPFQPNFSPGQGINQAQGLYHSSGPYRSPIEMASPFPA-HQGTPGVWNGSNGMPRY 175

Query: 204 NTPPNMSRGGNFTSPGFTQGNPPYFNXXXXXXXXXXXXXXHYDSXXXXXXXT-------- 359
             P N  RGGNF SPGF     P F                                   
Sbjct: 176 GVPSNSPRGGNFPSPGFRPVGSPSFRSGRGRGHWFNNSPSPVSGRGGSSSPNSGRGRSGW 235

Query: 360 FGNRMSPGSG 389
           FGN MSPGSG
Sbjct: 236 FGNSMSPGSG 245


>ref|XP_006472450.1| PREDICTED: RNA-binding protein FUS-like [Citrus sinensis]
          Length = 379

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 36/89 (40%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
 Frame = +3

Query: 24  PTPVYHYPPVNSPGQRIYQAPAAHFHQSPV----RSPMGPASPLGGPHENPPTAWRGSGG 191
           P P++   P    G    QA  +H+  SP     RSP G ASP  G H+  P +W GSGG
Sbjct: 151 PLPIHQGTPGAWSG---LQATTSHY--SPTIYGQRSPRGMASPFTGIHQGTPESWNGSGG 205

Query: 192 AFNYNTPPNMSRGGNFTSPGFTQGNPPYF 278
              YN+P   S GG   SPGF     P F
Sbjct: 206 TARYNSPSTASGGGQIFSPGFGPVRSPTF 234


>ref|XP_006433813.1| hypothetical protein CICLE_v10001506mg [Citrus clementina]
           gi|557535935|gb|ESR47053.1| hypothetical protein
           CICLE_v10001506mg [Citrus clementina]
          Length = 379

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 34/89 (38%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
 Frame = +3

Query: 24  PTPVYHYPPVNSPGQRIYQAPAAHFHQSPV----RSPMGPASPLGGPHENPPTAWRGSGG 191
           P P+Y   P     +   +  A   H SP     RSP G ASP  G H+  P +W GSGG
Sbjct: 151 PLPIYQGTP-----EAWSRLQATTIHYSPTIYGQRSPRGMASPFTGIHQGTPESWNGSGG 205

Query: 192 AFNYNTPPNMSRGGNFTSPGFTQGNPPYF 278
              YN+P   S GG   SP F     P F
Sbjct: 206 TARYNSPSTASGGGQIFSPSFGPVRSPTF 234


>ref|XP_006366423.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
           [Solanum tuberosum]
          Length = 348

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 29/61 (47%), Positives = 34/61 (55%)
 Frame = +3

Query: 99  HQSPVRSPMGPASPLGGPHENPPTAWRGSGGAFNYNTPPNMSRGGNFTSPGFTQGNPPYF 278
           H +P+ +P G  SP G P    P+AW  S G  N   PPN S GGNF SPG  QG  P F
Sbjct: 115 HYNPLGNP-GQNSPFGTPQRGSPSAWNNSFGTPNNYLPPNSSMGGNFASPGIHQGGRPGF 173

Query: 279 N 281
           +
Sbjct: 174 H 174


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