BLASTX nr result
ID: Rehmannia23_contig00020614
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00020614
(533 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAC33015.1| hypothetical protein [Antirrhinum hispanicum] 104 1e-20
gb|ABF97872.1| retrotransposon protein, putative, Ty3-gypsy subc... 91 2e-16
gb|AAX92960.1| retrotransposon protein, putative, Ty3-gypsy sub-... 88 1e-15
gb|EXB99730.1| hypothetical protein L484_023260 [Morus notabilis] 87 2e-15
emb|CAN77191.1| hypothetical protein VITISV_006389 [Vitis vinifera] 87 2e-15
emb|CAN69982.1| hypothetical protein VITISV_027150 [Vitis vinifera] 87 2e-15
gb|AAV80394.1| polyprotein [Hordeum vulgare subsp. vulgare] 87 2e-15
emb|CAN66189.1| hypothetical protein VITISV_006047 [Vitis vinifera] 86 7e-15
gb|ABA97430.1| retrotransposon protein, putative, Ty3-gypsy subc... 85 9e-15
gb|ABA98459.1| retrotransposon protein, putative, Ty3-gypsy subc... 85 9e-15
gb|ABA94813.1| retrotransposon protein, putative, Ty3-gypsy subc... 85 9e-15
gb|ABA94586.1| retrotransposon protein, putative, Ty3-gypsy subc... 85 9e-15
gb|ABF95970.1| retrotransposon protein, putative, unclassified [... 85 9e-15
emb|CAD41450.1| OSJNBa0019D11.8 [Oryza sativa Japonica Group] 85 1e-14
emb|CAH67609.1| OSIGBa0145G11.8 [Oryza sativa Indica Group] 85 1e-14
emb|CAI44647.2| OSJNBa0057M08.22 [Oryza sativa Japonica Group] 84 2e-14
emb|CAE04293.1| OSJNBa0083I11.3 [Oryza sativa Japonica Group] gi... 84 2e-14
gb|ABA98428.1| retrotransposon protein, putative, Ty3-gypsy subc... 84 2e-14
emb|CAE04526.2| OSJNBb0076A11.10 [Oryza sativa Japonica Group] 84 3e-14
gb|AAP50931.1| putative retrotransposon gag protein [Oryza sativ... 84 3e-14
>emb|CAC33015.1| hypothetical protein [Antirrhinum hispanicum]
Length = 1299
Score = 104 bits (259), Expect = 1e-20
Identities = 55/134 (41%), Positives = 83/134 (61%), Gaps = 3/134 (2%)
Frame = +1
Query: 1 WWRTVEEKWNRTETERTWDNFVQEFRKQYIPQVVREARRDEFYRLRQGAMTVAQYESEFH 180
WWR ++++W T RTWDNFV+EF +YIPQV R+ L Q + +V +YES+F
Sbjct: 308 WWRILDQRWKNDMTPRTWDNFVKEFYNKYIPQV-----RERILELIQWSNSVCEYESKFT 362
Query: 181 RLSKYAPGSVNEEEDKLYKFTRGLRQEIQKQLLSVEINTYDVAVRAAARVES---GLSRL 351
RL +YAP + +E K KF GL+ +I ++S+++ TY+VAV A RVE+ L ++
Sbjct: 363 RLIQYAPHYLEDEGRKARKFIEGLKLDICWAVISIDLATYEVAVEKALRVEAEMKELLKI 422
Query: 352 ESQLKVNINNTKKS 393
E ++K N + KS
Sbjct: 423 EERVKRNSTSDGKS 436
>gb|ABF97872.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1299
Score = 90.5 bits (223), Expect = 2e-16
Identities = 38/112 (33%), Positives = 66/112 (58%)
Frame = +1
Query: 1 WWRTVEEKWNRTETERTWDNFVQEFRKQYIPQVVREARRDEFYRLRQGAMTVAQYESEFH 180
WW T +E W E TW+ F FR+ ++P V +++EF RLRQG TV +Y ++F
Sbjct: 104 WWDTYKEAWEEDAGEPTWEEFTTVFRENFVPAAVMRMKKNEFRRLRQGNATVQEYLNQFT 163
Query: 181 RLSKYAPGSVNEEEDKLYKFTRGLRQEIQKQLLSVEINTYDVAVRAAARVES 336
+L++YA G + +EE+K+ KF GL E++ ++ + ++ + R+E+
Sbjct: 164 QLARYAIGDLADEEEKIDKFIEGLNDELRGPMIGQDHESFQSLINKVVRLEN 215
>gb|AAX92960.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group] gi|77550034|gb|ABA92831.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 789
Score = 88.2 bits (217), Expect = 1e-15
Identities = 40/122 (32%), Positives = 68/122 (55%)
Frame = +1
Query: 1 WWRTVEEKWNRTETERTWDNFVQEFRKQYIPQVVREARRDEFYRLRQGAMTVAQYESEFH 180
WW T +E + E TW+ F FR+ ++P V +R+EF RLRQG TV +Y + F
Sbjct: 415 WWDTYKEAREEDDGEPTWEEFTAAFRENFVPTAVMRMKRNEFRRLRQGNTTVQEYLNRFT 474
Query: 181 RLSKYAPGSVNEEEDKLYKFTRGLRQEIQKQLLSVEINTYDVAVRAAARVESGLSRLESQ 360
+L++YA G + +EE+K+ KF GL E++ ++ + ++ + R+E+ +E
Sbjct: 475 QLARYAIGDLADEEEKIDKFIEGLNDELRGPMIGQDQESFQSLINKVVRLENDQRTVEHN 534
Query: 361 LK 366
K
Sbjct: 535 RK 536
>gb|EXB99730.1| hypothetical protein L484_023260 [Morus notabilis]
Length = 227
Score = 87.4 bits (215), Expect = 2e-15
Identities = 49/143 (34%), Positives = 76/143 (53%)
Frame = +1
Query: 1 WWRTVEEKWNRTETERTWDNFVQEFRKQYIPQVVREARRDEFYRLRQGAMTVAQYESEFH 180
WW+ V+ + N TW+ F F QY PQ RE + EF L+QG M+V QYE++F+
Sbjct: 23 WWKQVKRRMNVVGL--TWEQFETLFNDQYFPQSYREEKALEFMSLQQGDMSVRQYEAKFN 80
Query: 181 RLSKYAPGSVNEEEDKLYKFTRGLRQEIQKQLLSVEINTYDVAVRAAARVESGLSRLESQ 360
LS++AP V E + KF +GL+ ++K L+++ + + V AA RVE Q
Sbjct: 81 DLSRFAPSLVESEHMRCLKFKKGLKNSVRKSLVALRLRNFRDLVAAATRVE--------Q 132
Query: 361 LKVNINNTKKSFAGQASKKPQQF 429
+ +K+ AG+ S + F
Sbjct: 133 DNLAYRQSKEEEAGRVSVSGRPF 155
>emb|CAN77191.1| hypothetical protein VITISV_006389 [Vitis vinifera]
Length = 1387
Score = 87.4 bits (215), Expect = 2e-15
Identities = 48/142 (33%), Positives = 79/142 (55%)
Frame = +1
Query: 1 WWRTVEEKWNRTETERTWDNFVQEFRKQYIPQVVREARRDEFYRLRQGAMTVAQYESEFH 180
WW +++ ++ TE TW+ F + F +Y +V + A+R EF L QG M+V +YES F
Sbjct: 108 WWESMKRVYD-TEV-MTWEEFERIFLGKYFGEVAKHAKRMEFEHLIQGTMSVLEYESRFS 165
Query: 181 RLSKYAPGSVNEEEDKLYKFTRGLRQEIQKQLLSVEINTYDVAVRAAARVESGLSRLESQ 360
LS++A G ++EE +K +F +GLR I+ +L+ + I Y V+ A VE +
Sbjct: 166 ELSRFALGMISEEGEKARRFQQGLRPAIRNRLVPLAIRDYSELVKRALLVEQDIDETNQI 225
Query: 361 LKVNINNTKKSFAGQASKKPQQ 426
+ + K G++S+ PQQ
Sbjct: 226 REKKRDRKGKQRMGESSQGPQQ 247
>emb|CAN69982.1| hypothetical protein VITISV_027150 [Vitis vinifera]
Length = 1495
Score = 87.0 bits (214), Expect = 2e-15
Identities = 48/142 (33%), Positives = 79/142 (55%)
Frame = +1
Query: 1 WWRTVEEKWNRTETERTWDNFVQEFRKQYIPQVVREARRDEFYRLRQGAMTVAQYESEFH 180
WW +++ ++ TE TW+ F + F +Y +V + A+R EF L QG M+V +YES F
Sbjct: 173 WWESMKRVYD-TEV-MTWEEFERIFLGKYFGEVAKHAKRMEFEHLIQGTMSVLEYESRFS 230
Query: 181 RLSKYAPGSVNEEEDKLYKFTRGLRQEIQKQLLSVEINTYDVAVRAAARVESGLSRLESQ 360
LS++A G ++EE +K +F +GLR I+ +L+ + I Y V+ A VE +
Sbjct: 231 ELSRFALGMISEEGEKARRFQQGLRPAIRNRLVPLAIRDYSELVKRALLVEQDIDETNQI 290
Query: 361 LKVNINNTKKSFAGQASKKPQQ 426
+ + K G++S+ PQQ
Sbjct: 291 REQKGDRKGKQRMGESSQGPQQ 312
>gb|AAV80394.1| polyprotein [Hordeum vulgare subsp. vulgare]
Length = 1486
Score = 87.0 bits (214), Expect = 2e-15
Identities = 47/141 (33%), Positives = 77/141 (54%)
Frame = +1
Query: 1 WWRTVEEKWNRTETERTWDNFVQEFRKQYIPQVVREARRDEFYRLRQGAMTVAQYESEFH 180
WW+ +++ +R +WD F ++FR YIP E R++F RL+QG +V +Y EFH
Sbjct: 133 WWQHLKD--SRGGRVMSWDEFCRDFRSHYIPSSFVEEMREKFRRLKQGNNSVYKYNVEFH 190
Query: 181 RLSKYAPGSVNEEEDKLYKFTRGLRQEIQKQLLSVEINTYDVAVRAAARVESGLSRLESQ 360
L++YA V +++ K+Y+F GL++++Q L + +D A R E+ L R+E
Sbjct: 191 ELARYALQDVPDQKSKIYQFRGGLKEDLQLALALHDPEEFDKFYNLALRAEAALLRVE-- 248
Query: 361 LKVNINNTKKSFAGQASKKPQ 423
N+KK F +S Q
Sbjct: 249 ------NSKKRFRDSSSSSTQ 263
>emb|CAN66189.1| hypothetical protein VITISV_006047 [Vitis vinifera]
Length = 1573
Score = 85.5 bits (210), Expect = 7e-15
Identities = 48/142 (33%), Positives = 78/142 (54%)
Frame = +1
Query: 1 WWRTVEEKWNRTETERTWDNFVQEFRKQYIPQVVREARRDEFYRLRQGAMTVAQYESEFH 180
WW +++ ++ TE TW+ F + F +Y +V + A+R EF L QG M V +YES F
Sbjct: 263 WWESMKRVYD-TEV-MTWEEFERIFLGKYFGEVAKHAKRMEFEHLIQGTMLVLEYESRFS 320
Query: 181 RLSKYAPGSVNEEEDKLYKFTRGLRQEIQKQLLSVEINTYDVAVRAAARVESGLSRLESQ 360
LS++A G ++EE +K +F +GLR I+ +L+ + I Y V+ A VE +
Sbjct: 321 ELSRFALGMISEEGEKARRFQQGLRPIIRNRLVPLAIRDYSELVKRALLVEQDIDETNQI 380
Query: 361 LKVNINNTKKSFAGQASKKPQQ 426
+ + K G++S+ PQQ
Sbjct: 381 REQKGDKKGKQRMGESSQGPQQ 402
>gb|ABA97430.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1226
Score = 85.1 bits (209), Expect = 9e-15
Identities = 39/122 (31%), Positives = 66/122 (54%)
Frame = +1
Query: 1 WWRTVEEKWNRTETERTWDNFVQEFRKQYIPQVVREARRDEFYRLRQGAMTVAQYESEFH 180
WW T +E E TW+ F FR+ ++P V +++EF RLRQG TV +Y + F
Sbjct: 104 WWDTYKEAREEDAGEPTWEEFTAAFRENFVPAAVMRMKKNEFRRLRQGNTTVQEYLNRFT 163
Query: 181 RLSKYAPGSVNEEEDKLYKFTRGLRQEIQKQLLSVEINTYDVAVRAAARVESGLSRLESQ 360
+L++YA G + EE+K+ KF GL E++ ++ + ++ + R+E+ +E
Sbjct: 164 QLARYAIGDLANEEEKIDKFIEGLNDELRGPMIGQDHESFQSLINKVVRLENDQRTVEHN 223
Query: 361 LK 366
K
Sbjct: 224 RK 225
>gb|ABA98459.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1470
Score = 85.1 bits (209), Expect = 9e-15
Identities = 39/122 (31%), Positives = 68/122 (55%)
Frame = +1
Query: 1 WWRTVEEKWNRTETERTWDNFVQEFRKQYIPQVVREARRDEFYRLRQGAMTVAQYESEFH 180
WW T +E E TW+ F FR+ ++P V +++EF RLRQG TV +Y ++F
Sbjct: 104 WWDTYKEAREDGAGEPTWEEFTAAFRENFVPTAVMRMKKNEFRRLRQGNTTVQEYLNKFT 163
Query: 181 RLSKYAPGSVNEEEDKLYKFTRGLRQEIQKQLLSVEINTYDVAVRAAARVESGLSRLESQ 360
+L++YA G + +EE+K+ KF GL E++ ++ + ++ + R+E+ +E
Sbjct: 164 QLARYAIGDLADEEEKIDKFIEGLNDELRGPMIGQDHESFQSLINKVVRLENDQRTVEHN 223
Query: 361 LK 366
K
Sbjct: 224 RK 225
>gb|ABA94813.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1712
Score = 85.1 bits (209), Expect = 9e-15
Identities = 39/122 (31%), Positives = 68/122 (55%)
Frame = +1
Query: 1 WWRTVEEKWNRTETERTWDNFVQEFRKQYIPQVVREARRDEFYRLRQGAMTVAQYESEFH 180
WW T +E E TW+ F FR+ ++P V +++EF RLRQG TV +Y ++F
Sbjct: 445 WWDTYKEAREDGAGEPTWEEFTAAFRENFVPAAVMRMKKNEFRRLRQGNTTVQEYLNKFT 504
Query: 181 RLSKYAPGSVNEEEDKLYKFTRGLRQEIQKQLLSVEINTYDVAVRAAARVESGLSRLESQ 360
+L++YA G + +EE+K+ KF GL E++ ++ + ++ + R+E+ +E
Sbjct: 505 QLARYAIGDLADEEEKIDKFIEGLNDELRGPMIGQDHESFQSLINKVVRLENDQRTVEHN 564
Query: 361 LK 366
K
Sbjct: 565 RK 566
>gb|ABA94586.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1710
Score = 85.1 bits (209), Expect = 9e-15
Identities = 39/122 (31%), Positives = 68/122 (55%)
Frame = +1
Query: 1 WWRTVEEKWNRTETERTWDNFVQEFRKQYIPQVVREARRDEFYRLRQGAMTVAQYESEFH 180
WW T +E E TW+ F FR+ ++P V +++EF RLRQG TV +Y ++F
Sbjct: 482 WWDTYKEAREDGAGEPTWEEFTAAFRENFVPAAVMRMKKNEFRRLRQGNTTVQEYLNKFT 541
Query: 181 RLSKYAPGSVNEEEDKLYKFTRGLRQEIQKQLLSVEINTYDVAVRAAARVESGLSRLESQ 360
+L++YA G + +EE+K+ KF GL E++ ++ + ++ + R+E+ +E
Sbjct: 542 QLARYAIGDLADEEEKIDKFIEGLNDELRGPMIGQDHESFQSLINKVVRLENDQRTVEHN 601
Query: 361 LK 366
K
Sbjct: 602 RK 603
>gb|ABF95970.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 990
Score = 85.1 bits (209), Expect = 9e-15
Identities = 46/125 (36%), Positives = 70/125 (56%)
Frame = +1
Query: 1 WWRTVEEKWNRTETERTWDNFVQEFRKQYIPQVVREARRDEFYRLRQGAMTVAQYESEFH 180
WW + E T TWD F F++ ++P + R+ EF L+Q +TV +Y EFH
Sbjct: 606 WWDSYEASRPEGHTI-TWDEFSSVFKRSHVPAGMITLRKREFRYLKQEDLTVTEYLHEFH 664
Query: 181 RLSKYAPGSVNEEEDKLYKFTRGLRQEIQKQLLSVEINTYDVAVRAAARVESGLSRLESQ 360
RL+ YAP V +ED+ KF +GL+ EI QLL E ++ V A ++ES +R+++
Sbjct: 665 RLAHYAPEDVENDEDQQEKFLQGLKDEIAVQLLLEEYEDFEKLVDKAIQLESEHNRMKNS 724
Query: 361 LKVNI 375
V+I
Sbjct: 725 CNVDI 729
>emb|CAD41450.1| OSJNBa0019D11.8 [Oryza sativa Japonica Group]
Length = 1470
Score = 84.7 bits (208), Expect = 1e-14
Identities = 39/122 (31%), Positives = 68/122 (55%)
Frame = +1
Query: 1 WWRTVEEKWNRTETERTWDNFVQEFRKQYIPQVVREARRDEFYRLRQGAMTVAQYESEFH 180
WW T +E E TW+ F FR+ ++P V +++EF RLRQG TV +Y ++F
Sbjct: 104 WWDTYKEAREDGAGEPTWEEFTVAFRENFVPAAVMRMKKNEFRRLRQGNTTVQEYLNKFT 163
Query: 181 RLSKYAPGSVNEEEDKLYKFTRGLRQEIQKQLLSVEINTYDVAVRAAARVESGLSRLESQ 360
+L++YA G + +EE+K+ KF GL E++ ++ + ++ + R+E+ +E
Sbjct: 164 QLARYAIGDLADEEEKIDKFIEGLNDELRGPMIGQDHESFQSLINKVVRLENDQRTVEHN 223
Query: 361 LK 366
K
Sbjct: 224 RK 225
>emb|CAH67609.1| OSIGBa0145G11.8 [Oryza sativa Indica Group]
Length = 1470
Score = 84.7 bits (208), Expect = 1e-14
Identities = 39/122 (31%), Positives = 68/122 (55%)
Frame = +1
Query: 1 WWRTVEEKWNRTETERTWDNFVQEFRKQYIPQVVREARRDEFYRLRQGAMTVAQYESEFH 180
WW T +E E TW+ F FR+ ++P V +++EF RLRQG TV +Y ++F
Sbjct: 104 WWDTYKEAREDGAGEPTWEEFTVAFRENFVPAAVMRMKKNEFRRLRQGNTTVQEYLNKFT 163
Query: 181 RLSKYAPGSVNEEEDKLYKFTRGLRQEIQKQLLSVEINTYDVAVRAAARVESGLSRLESQ 360
+L++YA G + +EE+K+ KF GL E++ ++ + ++ + R+E+ +E
Sbjct: 164 QLARYAIGDLADEEEKIDKFIEGLNDELRGPMIGQDHESFQSLINKVVRLENDQRTVEHN 223
Query: 361 LK 366
K
Sbjct: 224 RK 225
>emb|CAI44647.2| OSJNBa0057M08.22 [Oryza sativa Japonica Group]
Length = 449
Score = 84.3 bits (207), Expect = 2e-14
Identities = 46/127 (36%), Positives = 71/127 (55%), Gaps = 6/127 (4%)
Frame = +1
Query: 19 EKWNRTETER------TWDNFVQEFRKQYIPQVVREARRDEFYRLRQGAMTVAQYESEFH 180
E W+R E R TW+ F FR+ ++P R+ EF L+QG +TV +Y EF+
Sbjct: 131 EWWDRYEASRPEGHTITWNEFSSVFRRSHVPAGTITLRKREFRYLKQGDLTVTEYLHEFY 190
Query: 181 RLSKYAPGSVNEEEDKLYKFTRGLRQEIQKQLLSVEINTYDVAVRAAARVESGLSRLESQ 360
RL+ YAP V +EDK KF +GL+ E+ QLL + ++ V A ++ES +R+ +
Sbjct: 191 RLAHYAPEDVETDEDKQEKFLQGLKDELAVQLLLEDYENFEKLVDKAMQLESEHNRMTNC 250
Query: 361 LKVNINN 381
+ +NN
Sbjct: 251 KRRMVNN 257
>emb|CAE04293.1| OSJNBa0083I11.3 [Oryza sativa Japonica Group]
gi|38346951|emb|CAE04812.2| OSJNBb0022P19.7 [Oryza
sativa Japonica Group]
Length = 449
Score = 84.3 bits (207), Expect = 2e-14
Identities = 45/127 (35%), Positives = 72/127 (56%)
Frame = +1
Query: 1 WWRTVEEKWNRTETERTWDNFVQEFRKQYIPQVVREARRDEFYRLRQGAMTVAQYESEFH 180
WW + E T TW+ F FR+ ++P + R+ EF L+QG +TV +Y EF+
Sbjct: 132 WWDSYEASRPEGHTI-TWNEFSSVFRRSHVPAGMITLRKREFRYLKQGDLTVTKYLHEFY 190
Query: 181 RLSKYAPGSVNEEEDKLYKFTRGLRQEIQKQLLSVEINTYDVAVRAAARVESGLSRLESQ 360
RL++YAP V +EDK KF +GL+ E+ QLL + ++ V A ++ES +R+ +
Sbjct: 191 RLARYAPEDVETDEDKQEKFLQGLKDELAVQLLLEDYENFEKLVDKAMQLESEHNRMTNC 250
Query: 361 LKVNINN 381
+ +NN
Sbjct: 251 KRRMVNN 257
>gb|ABA98428.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 449
Score = 84.0 bits (206), Expect = 2e-14
Identities = 45/127 (35%), Positives = 71/127 (55%)
Frame = +1
Query: 1 WWRTVEEKWNRTETERTWDNFVQEFRKQYIPQVVREARRDEFYRLRQGAMTVAQYESEFH 180
WW + E T TWD F F++ ++P + R+ EF L+QG +TV +Y EF+
Sbjct: 132 WWDSYEASRPEGHTI-TWDEFSSVFKRSHVPAGMITLRKREFRYLKQGDLTVTEYLHEFY 190
Query: 181 RLSKYAPGSVNEEEDKLYKFTRGLRQEIQKQLLSVEINTYDVAVRAAARVESGLSRLESQ 360
RL+ YAP V +EDK KF +GL+ E+ QLL + ++ V A ++ES +R+ +
Sbjct: 191 RLAHYAPEDVETDEDKQEKFLQGLKDELAVQLLLEDYEDFEKLVDKAMQLESEHNRMTNC 250
Query: 361 LKVNINN 381
+ +NN
Sbjct: 251 KRRMVNN 257
>emb|CAE04526.2| OSJNBb0076A11.10 [Oryza sativa Japonica Group]
Length = 449
Score = 83.6 bits (205), Expect = 3e-14
Identities = 45/127 (35%), Positives = 72/127 (56%)
Frame = +1
Query: 1 WWRTVEEKWNRTETERTWDNFVQEFRKQYIPQVVREARRDEFYRLRQGAMTVAQYESEFH 180
WW + E T TW+ F F++ ++P + R+ EF L+QG +TVA+Y EF+
Sbjct: 132 WWDSYEASRPEGHTI-TWNEFSSVFKRSHVPAGMITLRKREFRYLKQGDLTVAEYLHEFY 190
Query: 181 RLSKYAPGSVNEEEDKLYKFTRGLRQEIQKQLLSVEINTYDVAVRAAARVESGLSRLESQ 360
RL+ YAP V +EDK KF +GL+ E+ QLL + ++ V A ++ES +R+ +
Sbjct: 191 RLAHYAPEDVETDEDKQEKFLQGLKDELAVQLLLEDYEDFEKLVDKAMQLESEHNRMTNC 250
Query: 361 LKVNINN 381
+ +NN
Sbjct: 251 KRRMVNN 257
>gb|AAP50931.1| putative retrotransposon gag protein [Oryza sativa Japonica Group]
gi|108708704|gb|ABF96499.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 863
Score = 83.6 bits (205), Expect = 3e-14
Identities = 45/119 (37%), Positives = 67/119 (56%)
Frame = +1
Query: 1 WWRTVEEKWNRTETERTWDNFVQEFRKQYIPQVVREARRDEFYRLRQGAMTVAQYESEFH 180
WW + E T TWD F F++ ++P + R+ EF L+Q +TV +Y EFH
Sbjct: 477 WWDSYEASRPEGHTI-TWDEFSSVFKRSHVPAGMITLRKREFRYLKQEDLTVTEYLHEFH 535
Query: 181 RLSKYAPGSVNEEEDKLYKFTRGLRQEIQKQLLSVEINTYDVAVRAAARVESGLSRLES 357
RL+ YAP V +EDK KF +GL+ EI QLL E ++ V A ++ES +R+++
Sbjct: 536 RLAHYAPEDVENDEDKQEKFLQGLKDEIAVQLLLEEYEDFEKLVDKAIQLESEHNRMKN 594