BLASTX nr result
ID: Rehmannia23_contig00020551
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00020551
(326 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004290736.1| PREDICTED: RNA-binding protein 39-like [Frag... 77 3e-12
ref|XP_002312948.2| hypothetical protein POPTR_0009s13940g [Popu... 74 2e-11
ref|XP_002306193.2| hypothetical protein POPTR_0004s18320g [Popu... 72 6e-11
gb|EMJ02383.1| hypothetical protein PRUPE_ppa003064mg [Prunus pe... 71 1e-10
ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vi... 71 1e-10
ref|XP_002516388.1| splicing factor, putative [Ricinus communis]... 70 2e-10
gb|ESW14802.1| hypothetical protein PHAVU_007G018500g [Phaseolus... 67 3e-09
ref|XP_004144853.1| PREDICTED: RNA-binding protein 39-like [Cucu... 67 3e-09
ref|XP_003536719.1| PREDICTED: RNA-binding protein 39-like isofo... 67 3e-09
ref|XP_006486689.1| PREDICTED: RNA-binding protein 39-like isofo... 64 3e-08
ref|XP_006486686.1| PREDICTED: RNA-binding protein 39-like isofo... 64 3e-08
ref|XP_006422532.1| hypothetical protein CICLE_v10027985mg [Citr... 64 3e-08
ref|XP_006409370.1| hypothetical protein EUTSA_v10022624mg [Eutr... 60 2e-07
ref|XP_006299838.1| hypothetical protein CARUB_v10016041mg [Caps... 60 3e-07
ref|XP_004497188.1| PREDICTED: RNA-binding protein 39-like [Cice... 60 4e-07
ref|XP_002886087.1| hypothetical protein ARALYDRAFT_480573 [Arab... 60 4e-07
gb|AAM62839.1| putative splicing factor [Arabidopsis thaliana] 60 4e-07
ref|NP_565399.1| splicing factor, CC1-like protein [Arabidopsis ... 60 4e-07
ref|XP_006847132.1| hypothetical protein AMTR_s00017p00234440 [A... 59 7e-07
ref|XP_003555861.1| PREDICTED: RNA-binding protein 39-like [Glyc... 59 7e-07
>ref|XP_004290736.1| PREDICTED: RNA-binding protein 39-like [Fragaria vesca subsp.
vesca]
Length = 588
Score = 76.6 bits (187), Expect = 3e-12
Identities = 40/64 (62%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Frame = +1
Query: 136 HLERHTDERG-REKSRDVESIDKGIKEGQREREFRDRNHESRKYKEKKEEGVEPEADPER 312
H ERH ER REKSRD+E KE ++E++ R+R ESR+YKEKKEE EPEADPER
Sbjct: 153 HSERHRSEREEREKSRDIEH-----KEKEKEKDLREREKESRRYKEKKEEVTEPEADPER 207
Query: 313 DQRT 324
DQRT
Sbjct: 208 DQRT 211
>ref|XP_002312948.2| hypothetical protein POPTR_0009s13940g [Populus trichocarpa]
gi|550331684|gb|EEE86903.2| hypothetical protein
POPTR_0009s13940g [Populus trichocarpa]
Length = 599
Score = 74.3 bits (181), Expect = 2e-11
Identities = 40/65 (61%), Positives = 49/65 (75%), Gaps = 4/65 (6%)
Frame = +1
Query: 142 ERHT---DERGREKSRDVESIDKGI-KEGQREREFRDRNHESRKYKEKKEEGVEPEADPE 309
ERH DE+ REKSR+ E +K KE ++ERE R+R+ ESR+YKE+KEE EPEADPE
Sbjct: 156 ERHRSDQDEKDREKSRERELREKEREKEREKERESRERDRESRRYKERKEEATEPEADPE 215
Query: 310 RDQRT 324
RDQRT
Sbjct: 216 RDQRT 220
>ref|XP_002306193.2| hypothetical protein POPTR_0004s18320g [Populus trichocarpa]
gi|550341316|gb|EEE86704.2| hypothetical protein
POPTR_0004s18320g [Populus trichocarpa]
Length = 609
Score = 72.4 bits (176), Expect = 6e-11
Identities = 36/63 (57%), Positives = 46/63 (73%), Gaps = 2/63 (3%)
Frame = +1
Query: 142 ERHTDERGREKSRDVESIDKGI--KEGQREREFRDRNHESRKYKEKKEEGVEPEADPERD 315
ER D REK R++ D+ + KE +RERE ++R+ ESR+YKE+KEE VEPE DPERD
Sbjct: 168 ERSRDRELREKDRELREKDRELREKEREREREPKERDRESRRYKERKEEAVEPEVDPERD 227
Query: 316 QRT 324
QRT
Sbjct: 228 QRT 230
>gb|EMJ02383.1| hypothetical protein PRUPE_ppa003064mg [Prunus persica]
Length = 607
Score = 71.2 bits (173), Expect = 1e-10
Identities = 37/64 (57%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Frame = +1
Query: 136 HLERHTDERG-REKSRDVESIDKGIKEGQREREFRDRNHESRKYKEKKEEGVEPEADPER 312
H ERH +R RE+SRDVE KE +E++ R+R ESR++K+KKEE EPEADPER
Sbjct: 160 HSERHRSDRDERERSRDVEH-----KERDKEKDLREREKESRRHKDKKEEVTEPEADPER 214
Query: 313 DQRT 324
DQRT
Sbjct: 215 DQRT 218
>ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vitis vinifera]
Length = 609
Score = 71.2 bits (173), Expect = 1e-10
Identities = 35/57 (61%), Positives = 45/57 (78%)
Frame = +1
Query: 154 DERGREKSRDVESIDKGIKEGQREREFRDRNHESRKYKEKKEEGVEPEADPERDQRT 324
DE+ RE+SRD E+ KE +RERE R+R+ E+R++K+KKEE EPEADPERDQRT
Sbjct: 169 DEKDRERSRDREN-----KEREREREIRERDRETRRHKDKKEEVAEPEADPERDQRT 220
>ref|XP_002516388.1| splicing factor, putative [Ricinus communis]
gi|223544486|gb|EEF46005.1| splicing factor, putative
[Ricinus communis]
Length = 609
Score = 70.5 bits (171), Expect = 2e-10
Identities = 38/58 (65%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
Frame = +1
Query: 154 DERGREKSRDVESIDKGIKEGQREREFRDRNHESRKY-KEKKEEGVEPEADPERDQRT 324
DE+ REKSRD E +E +RERE R+R+ ESR+Y KEKKEE EPEADPERDQRT
Sbjct: 175 DEKEREKSRDRE-----FRERERERESRERDRESRRYNKEKKEEAAEPEADPERDQRT 227
>gb|ESW14802.1| hypothetical protein PHAVU_007G018500g [Phaseolus vulgaris]
Length = 603
Score = 66.6 bits (161), Expect = 3e-09
Identities = 34/61 (55%), Positives = 45/61 (73%), Gaps = 4/61 (6%)
Frame = +1
Query: 154 DERGRE----KSRDVESIDKGIKEGQREREFRDRNHESRKYKEKKEEGVEPEADPERDQR 321
D+R RE K R++ S DK ++ +R RE R+R E+R++KEKKEEG EP+ADPERDQR
Sbjct: 161 DDRDRETVFDKDREI-SRDKDFRDRERVRETRERGRETRRHKEKKEEGTEPDADPERDQR 219
Query: 322 T 324
T
Sbjct: 220 T 220
>ref|XP_004144853.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
gi|449506986|ref|XP_004162902.1| PREDICTED: RNA-binding
protein 39-like [Cucumis sativus]
Length = 562
Score = 66.6 bits (161), Expect = 3e-09
Identities = 34/64 (53%), Positives = 45/64 (70%), Gaps = 3/64 (4%)
Frame = +1
Query: 142 ERHTDERG---REKSRDVESIDKGIKEGQREREFRDRNHESRKYKEKKEEGVEPEADPER 312
ERH +R RE+SRD E ++E ++ERE R+R + R+YK+KK+E EPEADPER
Sbjct: 121 ERHRSDRDDGIRERSRDNE-----LREREKERESRERGRDGRRYKDKKDETAEPEADPER 175
Query: 313 DQRT 324
DQRT
Sbjct: 176 DQRT 179
>ref|XP_003536719.1| PREDICTED: RNA-binding protein 39-like isoform X1 [Glycine max]
Length = 597
Score = 66.6 bits (161), Expect = 3e-09
Identities = 35/63 (55%), Positives = 43/63 (68%), Gaps = 6/63 (9%)
Frame = +1
Query: 154 DERGREKSRDVE------SIDKGIKEGQREREFRDRNHESRKYKEKKEEGVEPEADPERD 315
D++ RE SRD E S DK K+ R RE R+R+ + R++KEKKEE EPEADPERD
Sbjct: 162 DDKDRETSRDREYRDIERSRDKDYKDRGRVRESRERDRQDRRHKEKKEEATEPEADPERD 221
Query: 316 QRT 324
QRT
Sbjct: 222 QRT 224
>ref|XP_006486689.1| PREDICTED: RNA-binding protein 39-like isoform X5 [Citrus sinensis]
Length = 639
Score = 63.5 bits (153), Expect = 3e-08
Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 4/65 (6%)
Frame = +1
Query: 142 ERHTDERGREKSRDV----ESIDKGIKEGQREREFRDRNHESRKYKEKKEEGVEPEADPE 309
+R ER R + R+V S D+ +KE ++ERE RD + ESR+ KEKKE+ VEPE DPE
Sbjct: 187 DREVIERERSRDREVIERERSRDRELKEREKERESRDNDKESRRPKEKKEQ-VEPEVDPE 245
Query: 310 RDQRT 324
RDQRT
Sbjct: 246 RDQRT 250
>ref|XP_006486686.1| PREDICTED: RNA-binding protein 39-like isoform X2 [Citrus sinensis]
Length = 661
Score = 63.5 bits (153), Expect = 3e-08
Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 4/65 (6%)
Frame = +1
Query: 142 ERHTDERGREKSRDV----ESIDKGIKEGQREREFRDRNHESRKYKEKKEEGVEPEADPE 309
+R ER R + R+V S D+ +KE ++ERE RD + ESR+ KEKKE+ VEPE DPE
Sbjct: 209 DREVIERERSRDREVIERERSRDRELKEREKERESRDNDKESRRPKEKKEQ-VEPEVDPE 267
Query: 310 RDQRT 324
RDQRT
Sbjct: 268 RDQRT 272
>ref|XP_006422532.1| hypothetical protein CICLE_v10027985mg [Citrus clementina]
gi|557524466|gb|ESR35772.1| hypothetical protein
CICLE_v10027985mg [Citrus clementina]
Length = 639
Score = 63.5 bits (153), Expect = 3e-08
Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 4/65 (6%)
Frame = +1
Query: 142 ERHTDERGREKSRDV----ESIDKGIKEGQREREFRDRNHESRKYKEKKEEGVEPEADPE 309
+R ER R + R+V S D+ +KE ++ERE RD + ESR+ KEKKE+ VEPE DPE
Sbjct: 187 DREVIERERSRDREVIERERSRDRELKEREKERESRDNDKESRRPKEKKEQ-VEPEVDPE 245
Query: 310 RDQRT 324
RDQRT
Sbjct: 246 RDQRT 250
>ref|XP_006409370.1| hypothetical protein EUTSA_v10022624mg [Eutrema salsugineum]
gi|557110532|gb|ESQ50823.1| hypothetical protein
EUTSA_v10022624mg [Eutrema salsugineum]
Length = 566
Score = 60.5 bits (145), Expect = 2e-07
Identities = 30/61 (49%), Positives = 44/61 (72%)
Frame = +1
Query: 142 ERHTDERGREKSRDVESIDKGIKEGQREREFRDRNHESRKYKEKKEEGVEPEADPERDQR 321
ERH + REKS+++E+ +ER+ +DR+ + R++K+KKE+ VEPEADPERDQR
Sbjct: 140 ERHRSQE-REKSQEIET---------KERDTKDRDRDRRRHKDKKEDKVEPEADPERDQR 189
Query: 322 T 324
T
Sbjct: 190 T 190
>ref|XP_006299838.1| hypothetical protein CARUB_v10016041mg [Capsella rubella]
gi|482568547|gb|EOA32736.1| hypothetical protein
CARUB_v10016041mg [Capsella rubella]
Length = 550
Score = 60.1 bits (144), Expect = 3e-07
Identities = 30/61 (49%), Positives = 43/61 (70%)
Frame = +1
Query: 142 ERHTDERGREKSRDVESIDKGIKEGQREREFRDRNHESRKYKEKKEEGVEPEADPERDQR 321
ERH + REKS+++E +ERE ++R+ + R++K+KKE+ VEPEADPERDQR
Sbjct: 122 ERHRSQE-REKSQEIEP---------KEREIKERDRDRRRHKDKKEDKVEPEADPERDQR 171
Query: 322 T 324
T
Sbjct: 172 T 172
>ref|XP_004497188.1| PREDICTED: RNA-binding protein 39-like [Cicer arietinum]
Length = 613
Score = 59.7 bits (143), Expect = 4e-07
Identities = 29/62 (46%), Positives = 42/62 (67%)
Frame = +1
Query: 139 LERHTDERGREKSRDVESIDKGIKEGQREREFRDRNHESRKYKEKKEEGVEPEADPERDQ 318
+ R + R RE+SRD + D+G+ R+ ++ + E+R++KEKKEE EPE DPERDQ
Sbjct: 166 ISRDREYRERERSRDKDFRDRGMA-----RDLKEPDRENRRHKEKKEEAAEPEIDPERDQ 220
Query: 319 RT 324
RT
Sbjct: 221 RT 222
>ref|XP_002886087.1| hypothetical protein ARALYDRAFT_480573 [Arabidopsis lyrata subsp.
lyrata] gi|297331927|gb|EFH62346.1| hypothetical protein
ARALYDRAFT_480573 [Arabidopsis lyrata subsp. lyrata]
Length = 557
Score = 59.7 bits (143), Expect = 4e-07
Identities = 31/61 (50%), Positives = 42/61 (68%)
Frame = +1
Query: 142 ERHTDERGREKSRDVESIDKGIKEGQREREFRDRNHESRKYKEKKEEGVEPEADPERDQR 321
ERH + REKS ++E +ERE +DR+ + R++K+KKE+ VEPEADPERDQR
Sbjct: 133 ERHRSQE-REKSLEIEP---------KERETKDRDRDRRRHKDKKEDKVEPEADPERDQR 182
Query: 322 T 324
T
Sbjct: 183 T 183
>gb|AAM62839.1| putative splicing factor [Arabidopsis thaliana]
Length = 560
Score = 59.7 bits (143), Expect = 4e-07
Identities = 31/61 (50%), Positives = 42/61 (68%)
Frame = +1
Query: 142 ERHTDERGREKSRDVESIDKGIKEGQREREFRDRNHESRKYKEKKEEGVEPEADPERDQR 321
ERH + REKS ++E +ERE +DR+ + R++K+KKE+ VEPEADPERDQR
Sbjct: 133 ERHRSQE-REKSLEIEP---------KERETKDRDRDRRRHKDKKEDKVEPEADPERDQR 182
Query: 322 T 324
T
Sbjct: 183 T 183
>ref|NP_565399.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|20197280|gb|AAC64224.2| putative splicing factor
[Arabidopsis thaliana] gi|133778824|gb|ABO38752.1|
At2g16940 [Arabidopsis thaliana]
gi|330251464|gb|AEC06558.1| splicing factor, CC1-like
protein [Arabidopsis thaliana]
Length = 561
Score = 59.7 bits (143), Expect = 4e-07
Identities = 31/61 (50%), Positives = 42/61 (68%)
Frame = +1
Query: 142 ERHTDERGREKSRDVESIDKGIKEGQREREFRDRNHESRKYKEKKEEGVEPEADPERDQR 321
ERH + REKS ++E +ERE +DR+ + R++K+KKE+ VEPEADPERDQR
Sbjct: 133 ERHRSQE-REKSLEIEP---------KERETKDRDRDRRRHKDKKEDKVEPEADPERDQR 182
Query: 322 T 324
T
Sbjct: 183 T 183
>ref|XP_006847132.1| hypothetical protein AMTR_s00017p00234440 [Amborella trichopoda]
gi|548850161|gb|ERN08713.1| hypothetical protein
AMTR_s00017p00234440 [Amborella trichopoda]
Length = 716
Score = 58.9 bits (141), Expect = 7e-07
Identities = 34/61 (55%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Frame = +1
Query: 145 RHTDERGREKSRDVESIDKGI-KEGQREREFRDRNHESRKYKEKKEEGVEPEADPERDQR 321
R+ ER R KSRD+E ++ +E ++ERE R E R+ KEKKE VEPEADPERDQR
Sbjct: 290 RYERERDRGKSRDMEEREREREREREKERELELREREMRRLKEKKEV-VEPEADPERDQR 348
Query: 322 T 324
T
Sbjct: 349 T 349
>ref|XP_003555861.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
Length = 600
Score = 58.9 bits (141), Expect = 7e-07
Identities = 34/67 (50%), Positives = 43/67 (64%), Gaps = 6/67 (8%)
Frame = +1
Query: 139 LERHTDERGREKSRDVE------SIDKGIKEGQREREFRDRNHESRKYKEKKEEGVEPEA 300
L D++ RE SRD E S DK K+ +R RE R+ + E+R++KEKKEE EP A
Sbjct: 161 LRTDLDDKDREASRDREYRDRERSRDKDYKDRERVRESREHDRENRRHKEKKEETTEP-A 219
Query: 301 DPERDQR 321
DPERDQR
Sbjct: 220 DPERDQR 226