BLASTX nr result
ID: Rehmannia23_contig00020448
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00020448
(363 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006339300.1| PREDICTED: pentatricopeptide repeat-containi... 100 2e-19
gb|EOY07879.1| Pentatricopeptide repeat superfamily protein, put... 92 7e-17
ref|XP_004306251.1| PREDICTED: pentatricopeptide repeat-containi... 91 1e-16
ref|XP_002335015.1| predicted protein [Populus trichocarpa] 91 2e-16
gb|EPS66258.1| hypothetical protein M569_08518 [Genlisea aurea] 90 4e-16
ref|XP_006493033.1| PREDICTED: pentatricopeptide repeat-containi... 88 1e-15
ref|XP_006428728.1| hypothetical protein CICLE_v10011284mg [Citr... 88 1e-15
ref|XP_002515739.1| pentatricopeptide repeat-containing protein,... 87 2e-15
ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containi... 82 1e-13
emb|CBI32762.3| unnamed protein product [Vitis vinifera] 79 8e-13
ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containi... 72 1e-10
ref|XP_006410393.1| hypothetical protein EUTSA_v10017786mg [Eutr... 69 6e-10
ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containi... 69 6e-10
ref|XP_004497786.1| PREDICTED: pentatricopeptide repeat-containi... 67 2e-09
ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago t... 64 2e-08
ref|XP_006296491.1| hypothetical protein CARUB_v10025677mg [Caps... 63 4e-08
ref|NP_180822.1| pentatricopeptide repeat-containing protein [Ar... 63 4e-08
gb|EXC22880.1| hypothetical protein L484_007489 [Morus notabilis] 62 1e-07
gb|EXC16187.1| hypothetical protein L484_024357 [Morus notabilis] 61 1e-07
gb|EOY34445.1| Pentatricopeptide repeat-containing protein, puta... 59 7e-07
>ref|XP_006339300.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Solanum tuberosum]
Length = 1090
Score = 100 bits (250), Expect = 2e-19
Identities = 55/111 (49%), Positives = 72/111 (64%)
Frame = +1
Query: 31 ASMSNQKLYAIAKQVFSSNFASRSNDQQIANLIAKALINPTSKSLHISPSLISNLNSHIT 210
+ MS +K Y AKQ+FS + +++IA LI+ LIN S + I PSL S LN +T
Sbjct: 484 SQMSTRKFYQTAKQLFS-----KKPNEEIAKLISNTLIN-FSSTKKIPPSLTSYLNPQVT 537
Query: 211 HLVLSNPQIPASSCLRFFKFLQTNQSINPQRPNFEAHLTVILRLFEVRRFA 363
HLV NP +P SCL FFKFLQ NQS +RPN E+H+ + LRLF+ R+FA
Sbjct: 538 HLVFLNPSVPTQSCLSFFKFLQKNQSF--ERPNLESHIALFLRLFKARKFA 586
>gb|EOY07879.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
cacao]
Length = 743
Score = 92.0 bits (227), Expect = 7e-17
Identities = 47/108 (43%), Positives = 69/108 (63%)
Frame = +1
Query: 37 MSNQKLYAIAKQVFSSNFASRSNDQQIANLIAKALINPTSKSLHISPSLISNLNSHITHL 216
MS +KL + K+ SSN S +N Q+ A I LI K +PSL+SNL+S++T L
Sbjct: 1 MSTEKLSQMLKEAVSSNRTSLTN-QKTAAKITTILIKSGLKPFKTNPSLLSNLDSNVTSL 59
Query: 217 VLSNPQIPASSCLRFFKFLQTNQSINPQRPNFEAHLTVILRLFEVRRF 360
+LSNP +P SC FF FL+TN S+ Q+P+ + H+ +ILRL++ +F
Sbjct: 60 ILSNPNLPLQSCTLFFNFLKTNLSLTSQKPSLKTHIAIILRLYKAGKF 107
>ref|XP_004306251.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Fragaria vesca subsp. vesca]
Length = 602
Score = 91.3 bits (225), Expect = 1e-16
Identities = 46/88 (52%), Positives = 61/88 (69%), Gaps = 1/88 (1%)
Frame = +1
Query: 103 NDQQIANLIAKALINPTSKSLHIS-PSLISNLNSHITHLVLSNPQIPASSCLRFFKFLQT 279
++Q++A IAK L + + L S PSL+SNLN HITHLVLS+P +P SCL FF FL+
Sbjct: 3 SNQELAQTIAKTLADSGLQHLRTSSPSLLSNLNPHITHLVLSDPILPPQSCLTFFNFLRR 62
Query: 280 NQSINPQRPNFEAHLTVILRLFEVRRFA 363
N S+ P RPN +AH+T+ RL + RFA
Sbjct: 63 NPSLIPLRPNLQAHVTLFCRLHQANRFA 90
>ref|XP_002335015.1| predicted protein [Populus trichocarpa]
Length = 302
Score = 90.5 bits (223), Expect = 2e-16
Identities = 48/110 (43%), Positives = 69/110 (62%), Gaps = 1/110 (0%)
Frame = +1
Query: 37 MSNQKLYAIAKQVFSSNFASRSNDQQIANLIAKALINPTSKSLHIS-PSLISNLNSHITH 213
M+ QKL K+ + + ++ ++A IAK LI K + SL+SNL+SHIT+
Sbjct: 1 MATQKLLQTFKKTPITASPTSLSNSELAQKIAKTLIKAGLKPFETTNSSLLSNLDSHITN 60
Query: 214 LVLSNPQIPASSCLRFFKFLQTNQSINPQRPNFEAHLTVILRLFEVRRFA 363
LV SNP +P SCL FF FL+ NQS +P+ ++HL+V+ RLF+ RRFA
Sbjct: 61 LVFSNPNVPLHSCLNFFNFLRKNQSFVSHKPDLQSHLSVVFRLFKARRFA 110
>gb|EPS66258.1| hypothetical protein M569_08518 [Genlisea aurea]
Length = 610
Score = 89.7 bits (221), Expect = 4e-16
Identities = 51/108 (47%), Positives = 73/108 (67%)
Frame = +1
Query: 40 SNQKLYAIAKQVFSSNFASRSNDQQIANLIAKALINPTSKSLHISPSLISNLNSHITHLV 219
++Q+ + + KQ FS S+S+D IA+LI+K+L T LH PS S+LN + V
Sbjct: 3 THQRFHNVVKQ-FS---VSKSDDGIIADLISKSLSTTTKSLLHRIPS--SDLNPAVIRRV 56
Query: 220 LSNPQIPASSCLRFFKFLQTNQSINPQRPNFEAHLTVILRLFEVRRFA 363
+SNP++P SSCL FF++LQT + PQ+P+F H+T+ LRLF VRRFA
Sbjct: 57 ISNPEVPVSSCLSFFRYLQTTARL-PQKPDFRTHVTLALRLFAVRRFA 103
>ref|XP_006493033.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Citrus sinensis]
Length = 630
Score = 88.2 bits (217), Expect = 1e-15
Identities = 42/85 (49%), Positives = 58/85 (68%)
Frame = +1
Query: 109 QQIANLIAKALINPTSKSLHISPSLISNLNSHITHLVLSNPQIPASSCLRFFKFLQTNQS 288
+ I+ IAK L N + +PSL+SNLNSHITHLVLS+ +P +CL FF FL+ N S
Sbjct: 24 KDISTQIAKTLFNSGIEPFKTTPSLLSNLNSHITHLVLSDTNLPPHACLHFFNFLRQNPS 83
Query: 289 INPQRPNFEAHLTVILRLFEVRRFA 363
+ RP+ +AH+T+I RL E ++FA
Sbjct: 84 LYSHRPDLQAHVTLICRLHEAQKFA 108
>ref|XP_006428728.1| hypothetical protein CICLE_v10011284mg [Citrus clementina]
gi|557530785|gb|ESR41968.1| hypothetical protein
CICLE_v10011284mg [Citrus clementina]
Length = 630
Score = 88.2 bits (217), Expect = 1e-15
Identities = 42/85 (49%), Positives = 58/85 (68%)
Frame = +1
Query: 109 QQIANLIAKALINPTSKSLHISPSLISNLNSHITHLVLSNPQIPASSCLRFFKFLQTNQS 288
+ I+ IAK L N + +PSL+SNLNSHITHLVLS+ +P +CL FF FL+ N S
Sbjct: 24 KDISTQIAKTLFNSGIEPFKTTPSLLSNLNSHITHLVLSDTNLPPHACLHFFNFLRQNPS 83
Query: 289 INPQRPNFEAHLTVILRLFEVRRFA 363
+ RP+ +AH+T+I RL E ++FA
Sbjct: 84 LYSHRPDLQAHVTLICRLHEAQKFA 108
>ref|XP_002515739.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223545176|gb|EEF46686.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 613
Score = 87.0 bits (214), Expect = 2e-15
Identities = 49/108 (45%), Positives = 66/108 (61%)
Frame = +1
Query: 37 MSNQKLYAIAKQVFSSNFASRSNDQQIANLIAKALINPTSKSLHISPSLISNLNSHITHL 216
M+NQKL K+ + + Q+IA I K LI K L SL+SNL+S+ T+L
Sbjct: 1 MANQKLSQAFKRS-NPTIPTSILSQEIAEKITKILIKSGLKPLETKSSLLSNLDSYTTNL 59
Query: 217 VLSNPQIPASSCLRFFKFLQTNQSINPQRPNFEAHLTVILRLFEVRRF 360
VLSNP +P SCL FFK LQ NQS+ +P+ AH+ +I RLF+ R+F
Sbjct: 60 VLSNPNLPTRSCLNFFKCLQKNQSLICHKPDLRAHVILISRLFKARKF 107
>ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Vitis vinifera]
Length = 625
Score = 81.6 bits (200), Expect = 1e-13
Identities = 44/107 (41%), Positives = 70/107 (65%)
Frame = +1
Query: 37 MSNQKLYAIAKQVFSSNFASRSNDQQIANLIAKALINPTSKSLHISPSLISNLNSHITHL 216
MS K+++ K+ FSSN + + N Q+IA I+K L++ +KSL +PSL+S+LNS HL
Sbjct: 1 MSTPKMWSNLKKAFSSNPSLKLN-QEIAGKISKTLVSSGAKSLQTTPSLLSSLNSQTVHL 59
Query: 217 VLSNPQIPASSCLRFFKFLQTNQSINPQRPNFEAHLTVILRLFEVRR 357
+LSN + A SCL FF F++ N +P+ A++T+I +L+ R+
Sbjct: 60 ILSNHILTAESCLDFFHFIRKNY----YKPDLRAYITLIFKLYRSRK 102
>emb|CBI32762.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 78.6 bits (192), Expect = 8e-13
Identities = 41/105 (39%), Positives = 70/105 (66%)
Frame = +1
Query: 43 NQKLYAIAKQVFSSNFASRSNDQQIANLIAKALINPTSKSLHISPSLISNLNSHITHLVL 222
++++++ K+ FSSN + + N Q+IA I+K L++ +KSL +PSL+S+LNS HL+L
Sbjct: 7 DERMWSNLKKAFSSNPSLKLN-QEIAGKISKTLVSSGAKSLQTTPSLLSSLNSQTVHLIL 65
Query: 223 SNPQIPASSCLRFFKFLQTNQSINPQRPNFEAHLTVILRLFEVRR 357
SN + A SCL FF F++ N +P+ A++T+I +L+ R+
Sbjct: 66 SNHILTAESCLDFFHFIRKNY----YKPDLRAYITLIFKLYRSRK 106
>ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Cucumis sativus]
Length = 606
Score = 71.6 bits (174), Expect = 1e-10
Identities = 37/85 (43%), Positives = 53/85 (62%)
Frame = +1
Query: 109 QQIANLIAKALINPTSKSLHISPSLISNLNSHITHLVLSNPQIPASSCLRFFKFLQTNQS 288
Q IA IAK ++ + +PSL+SN +S + LVLS+P +P SCLRFF FL+ N S
Sbjct: 4 QAIAANIAKLILKSGLQPFKTTPSLLSNFDSRVMQLVLSDPNLPTRSCLRFFDFLRQNPS 63
Query: 289 INPQRPNFEAHLTVILRLFEVRRFA 363
++P+ AHL + RL+ R+FA
Sbjct: 64 ---RKPDLPAHLILFSRLYRARKFA 85
>ref|XP_006410393.1| hypothetical protein EUTSA_v10017786mg [Eutrema salsugineum]
gi|557111562|gb|ESQ51846.1| hypothetical protein
EUTSA_v10017786mg [Eutrema salsugineum]
Length = 626
Score = 68.9 bits (167), Expect = 6e-10
Identities = 38/86 (44%), Positives = 54/86 (62%)
Frame = +1
Query: 103 NDQQIANLIAKALINPTSKSLHISPSLISNLNSHITHLVLSNPQIPASSCLRFFKFLQTN 282
+D++ A I L + K L +PSL+ NLNS++T LVLS P +P SC+ FFKFL+T
Sbjct: 32 SDRETARRITAYLEKSSIKKLQSNPSLLFNLNSNVTRLVLSKPTLPTQSCIDFFKFLRTF 91
Query: 283 QSINPQRPNFEAHLTVILRLFEVRRF 360
+S RP+ A +T+ RL+ RRF
Sbjct: 92 ES--RLRPDLTAVVTLAHRLYSDRRF 115
>ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like, partial [Cucumis sativus]
Length = 602
Score = 68.9 bits (167), Expect = 6e-10
Identities = 34/79 (43%), Positives = 50/79 (63%)
Frame = +1
Query: 127 IAKALINPTSKSLHISPSLISNLNSHITHLVLSNPQIPASSCLRFFKFLQTNQSINPQRP 306
IAK ++ + +PSL+SN +S + LVLS+P +P SCLRFF FL+ N S ++P
Sbjct: 6 IAKLILKSGLQPFKTTPSLLSNFDSRVMQLVLSDPNLPTRSCLRFFDFLRQNPS---RKP 62
Query: 307 NFEAHLTVILRLFEVRRFA 363
+ AHL + RL+ R+FA
Sbjct: 63 DLPAHLILFSRLYRARKFA 81
>ref|XP_004497786.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Cicer arietinum]
Length = 634
Score = 67.4 bits (163), Expect = 2e-09
Identities = 42/114 (36%), Positives = 64/114 (56%), Gaps = 6/114 (5%)
Frame = +1
Query: 40 SNQKLYAIAKQVFSSNFASRSNDQ-QIANLIAKALINPTSKSLHISP-----SLISNLNS 201
S + L+ I + S F S Q ++A+ I + LIN + + S S+IS +
Sbjct: 3 SQKTLFRIINKTVS--FPSNQQQQHELAHKITQILINSKTPNYFKSNNTELHSMISCITP 60
Query: 202 HITHLVLSNPQIPASSCLRFFKFLQTNQSINPQRPNFEAHLTVILRLFEVRRFA 363
H+T+ VLSNP +P SCL FF FL+T S +P+ +HL ++ RLF+ R+FA
Sbjct: 61 HVTYRVLSNPILPPHSCLSFFHFLKTQHSNISLKPDLNSHLILLSRLFQARKFA 114
>ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479250|gb|AES60453.1| Pentatricopeptide repeat
protein [Medicago truncatula]
Length = 772
Score = 64.3 bits (155), Expect = 2e-08
Identities = 42/110 (38%), Positives = 60/110 (54%), Gaps = 7/110 (6%)
Frame = +1
Query: 55 YAIAKQVFSSNFASRSNDQQ---IANLIAKALINPTSKS----LHISPSLISNLNSHITH 213
+ I VF+ + S Q I + I + L+N + S LH S+IS + H+T+
Sbjct: 4 HKILLSVFNKTVSFPSKQHQPNEIVHKITQILVNYSKTSNNPDLH---SIISCITPHVTY 60
Query: 214 LVLSNPQIPASSCLRFFKFLQTNQSINPQRPNFEAHLTVILRLFEVRRFA 363
VLS P + SCL FF FL+T S +P+ +AHL +I RLFE R+FA
Sbjct: 61 RVLSQPILQPHSCLAFFHFLKTQHSNISLKPDLKAHLILISRLFEARKFA 110
>ref|XP_006296491.1| hypothetical protein CARUB_v10025677mg [Capsella rubella]
gi|482565199|gb|EOA29389.1| hypothetical protein
CARUB_v10025677mg [Capsella rubella]
Length = 627
Score = 63.2 bits (152), Expect = 4e-08
Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Frame = +1
Query: 103 NDQQIANLIAKALINPTS-KSLHISPSLISNLNSHITHLVLSNPQIPASSCLRFFKFLQT 279
+DQ+ A I L++ +S L +PSL+ NLNS++T LVLS P +P SC+ FFK+L+
Sbjct: 32 SDQEAARRIKAYLVDKSSIGKLQSNPSLLFNLNSNVTRLVLSEPTLPTQSCIDFFKYLRG 91
Query: 280 NQSINPQRPNFEAHLTVILRLFEVRRFA 363
+S +P+ A +T+ RL+ RRF+
Sbjct: 92 FES--NLKPDLTAVVTLAHRLYSNRRFS 117
>ref|NP_180822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75160493|sp|Q8S8P6.1|PP180_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g32630 gi|20197234|gb|AAM14987.1| putative
salt-inducible protein [Arabidopsis thaliana]
gi|330253613|gb|AEC08707.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 624
Score = 63.2 bits (152), Expect = 4e-08
Identities = 37/88 (42%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Frame = +1
Query: 100 SNDQQIANLIAKALINP-TSKSLHISPSLISNLNSHITHLVLSNPQIPASSCLRFFKFLQ 276
S+DQ+ A I L+ T L +PSL+ NLNS++T LVLS P +P SC+ FFK L+
Sbjct: 28 SSDQEAARRITACLVEKSTIGKLQSNPSLLFNLNSNVTRLVLSEPTLPTQSCIDFFKLLR 87
Query: 277 TNQSINPQRPNFEAHLTVILRLFEVRRF 360
+S +P+ A +T+ RL+ RRF
Sbjct: 88 EFES--NLKPDLTAVVTLSHRLYSNRRF 113
>gb|EXC22880.1| hypothetical protein L484_007489 [Morus notabilis]
Length = 134
Score = 61.6 bits (148), Expect = 1e-07
Identities = 32/85 (37%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Frame = +1
Query: 112 QIANLIAKALINPTSKSLHISP-SLISNLNSHITHLVLSNPQIPASSCLRFFKFLQTNQS 288
QI N I+K + K++ + S +S+L+ + HL+LS+P + +S C +FF FL N+S
Sbjct: 24 QIVNAISKTPMFSPPKTMDTTAISFLSHLDLNSLHLILSDPNVRSSVCFKFFNFLVKNRS 83
Query: 289 INPQRPNFEAHLTVILRLFEVRRFA 363
+P+ +AHLT+I RL + R F+
Sbjct: 84 FVSVKPDLQAHLTLISRLLKSRNFS 108
>gb|EXC16187.1| hypothetical protein L484_024357 [Morus notabilis]
Length = 608
Score = 61.2 bits (147), Expect = 1e-07
Identities = 31/62 (50%), Positives = 43/62 (69%)
Frame = +1
Query: 178 SLISNLNSHITHLVLSNPQIPASSCLRFFKFLQTNQSINPQRPNFEAHLTVILRLFEVRR 357
SL+S+L+S THLVLS+P++ CL FF FL+T QS +P+ AHL + RL+EVR+
Sbjct: 38 SLLSDLDSRATHLVLSDPRVRPRYCLSFFNFLRTTQS---HKPDLLAHLAIARRLYEVRQ 94
Query: 358 FA 363
A
Sbjct: 95 LA 96
>gb|EOY34445.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
cacao]
Length = 561
Score = 58.9 bits (141), Expect = 7e-07
Identities = 38/105 (36%), Positives = 58/105 (55%)
Frame = +1
Query: 49 KLYAIAKQVFSSNFASRSNDQQIANLIAKALINPTSKSLHISPSLISNLNSHITHLVLSN 228
K K+ + S +S+ Q + + I++ L TSK L S IS+LN H +L+N
Sbjct: 102 KTLKTVKKSYPSGLSSKPY-QPLPDFISQFLT--TSKPL--DASTISDLNPTTFHDILTN 156
Query: 229 PQIPASSCLRFFKFLQTNQSINPQRPNFEAHLTVILRLFEVRRFA 363
P + AS C RFF + NQS+ +P+ +AHLT+ RL + R F+
Sbjct: 157 PDLKASKCFRFFNLVIKNQSLVSFKPDLQAHLTLTCRLLKARLFS 201