BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00020270
         (1009 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006355238.1| PREDICTED: mediator of RNA polymerase II tra...   387   e-105
ref|XP_004246059.1| PREDICTED: mediator of RNA polymerase II tra...   386   e-105
ref|XP_002267000.2| PREDICTED: ATP-dependent DNA helicase Q-like...   362   1e-97
gb|EMJ10069.1| hypothetical protein PRUPE_ppa026000mg, partial [...   359   1e-96
emb|CBI29242.3| unnamed protein product [Vitis vinifera]              356   9e-96
gb|ESW30123.1| hypothetical protein PHAVU_002G126800g [Phaseolus...   354   3e-95
ref|XP_004512366.1| PREDICTED: mediator of RNA polymerase II tra...   351   2e-94
ref|XP_002304389.1| DNA helicase family protein [Populus trichoc...   351   2e-94
ref|XP_006471563.1| PREDICTED: mediator of RNA polymerase II tra...   350   4e-94
ref|XP_006471562.1| PREDICTED: mediator of RNA polymerase II tra...   350   4e-94
ref|XP_004301675.1| PREDICTED: mediator of RNA polymerase II tra...   348   2e-93
ref|XP_002519863.1| DNA helicase recq1, putative [Ricinus commun...   347   4e-93
ref|XP_003612577.1| ATP-dependent DNA helicase RecQ family prote...   347   6e-93
ref|XP_003534325.1| PREDICTED: mediator of RNA polymerase II tra...   345   1e-92
gb|EOY25440.1| RECQ helicase L2 isoform 1 [Theobroma cacao]           337   3e-90
ref|XP_006854226.1| hypothetical protein AMTR_s00048p00224070 [A...   335   1e-89
ref|XP_006587645.1| PREDICTED: mediator of RNA polymerase II tra...   328   2e-87
ref|NP_001077639.1| mediator of RNA polymerase II transcription ...   320   4e-85
ref|NP_174421.2| mediator of RNA polymerase II transcription sub...   320   4e-85
ref|XP_002893846.1| RECQL2 [Arabidopsis lyrata subsp. lyrata] gi...   319   1e-84

>ref|XP_006355238.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            34-like [Solanum tuberosum]
          Length = 706

 Score =  387 bits (994), Expect = e-105
 Identities = 207/318 (65%), Positives = 237/318 (74%)
 Frame = -2

Query: 981  SYYQESGRAGRDGLPSECLLYFRPADVPRQSSMVFYENSGLQNLYDIVRYCLSKRQCRRG 802
            +YYQESGRAGRDGLPSEC+L+FRPAD PRQSSMVFYENSGL+NLYDIVRYC SKR+CRR 
Sbjct: 396  TYYQESGRAGRDGLPSECVLFFRPADAPRQSSMVFYENSGLKNLYDIVRYCQSKRECRRS 455

Query: 801  AFFRHFAEPLQDCNGMCDNCASYNEINELDVSGHAKSIVSFLQEMQENDQRVTMLQLVDX 622
            AFFRHFAEPLQ+CNGMCDNCA  NE+ ELDVS HAK IVS L+++QENDQRVTMLQLV+ 
Sbjct: 456  AFFRHFAEPLQECNGMCDNCAFSNEVEELDVSSHAKLIVSMLKDIQENDQRVTMLQLVE- 514

Query: 621  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEEFQHTAYATNAYVTIGPLAKQVLHGK 442
                                            KEEFQHTAYATNAYVT+GPLAKQVL G 
Sbjct: 515  -KLKVKQKNLGPDLKKDELEQLVIKLVLDHVLKEEFQHTAYATNAYVTVGPLAKQVLQGN 573

Query: 441  KIVKLEIHCGQKSSSTNSNTHKRGKSSALEYKLDELRKELASLDGGIFPHSVLSTQQIGT 262
            KI+K+E+   Q  +S++  + KR +S+ L+ KLDELRKELAS+ GGIFPHSVLSTQQI T
Sbjct: 574  KIIKVEMSTRQSRTSSSMKSSKRERSTGLDDKLDELRKELASIHGGIFPHSVLSTQQIST 633

Query: 261  LSANKPKSMEELEKIIGKLKSEKYGPRILKEINDYESNNPMXXXXXXXXXXXSAGRAVKK 82
            LS  KPKS+EELEKIIGKLK+EKYG RIL+EI  YES+              + G  VKK
Sbjct: 634  LSGQKPKSIEELEKIIGKLKTEKYGDRILEEIVSYESD----PQKDADGSKETKGNTVKK 689

Query: 81   LKTRKEALVVIESSGDET 28
            LKT+K ALVV+ESS DET
Sbjct: 690  LKTKK-ALVVLESSEDET 706


>ref|XP_004246059.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            34-like [Solanum lycopersicum]
          Length = 708

 Score =  386 bits (992), Expect = e-105
 Identities = 207/318 (65%), Positives = 236/318 (74%)
 Frame = -2

Query: 981  SYYQESGRAGRDGLPSECLLYFRPADVPRQSSMVFYENSGLQNLYDIVRYCLSKRQCRRG 802
            +YYQESGRAGRDGLPSEC+L+FRPAD PRQSSMVFYENSGL+NLYDIVRYC SKR+CRR 
Sbjct: 396  TYYQESGRAGRDGLPSECVLFFRPADAPRQSSMVFYENSGLKNLYDIVRYCQSKRECRRS 455

Query: 801  AFFRHFAEPLQDCNGMCDNCASYNEINELDVSGHAKSIVSFLQEMQENDQRVTMLQLVDX 622
            AFFRHFAEPLQ+CNGMCDNCA  NE+ ELDVS HAK IVS L+++QENDQRVTMLQLV+ 
Sbjct: 456  AFFRHFAEPLQECNGMCDNCAFSNEVEELDVSSHAKLIVSMLKDIQENDQRVTMLQLVE- 514

Query: 621  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEEFQHTAYATNAYVTIGPLAKQVLHGK 442
                                            KEEFQHTAYATNAYVT+GPLAKQVL G 
Sbjct: 515  KLKVKQKNLGPDLKKDELEQLVIKLLRASVLHKEEFQHTAYATNAYVTVGPLAKQVLQGN 574

Query: 441  KIVKLEIHCGQKSSSTNSNTHKRGKSSALEYKLDELRKELASLDGGIFPHSVLSTQQIGT 262
            KI+K+E+   Q  +S++  + KR +S+ L  KLDELRKELAS+ GGIFPHSVLSTQQI T
Sbjct: 575  KIIKVELSTRQTRTSSSMKSSKRERSTGLNDKLDELRKELASIHGGIFPHSVLSTQQIST 634

Query: 261  LSANKPKSMEELEKIIGKLKSEKYGPRILKEINDYESNNPMXXXXXXXXXXXSAGRAVKK 82
            LSA KPKS+EELEKIIGKLK+EKYG RIL+EI  YES+              + G  VKK
Sbjct: 635  LSAQKPKSIEELEKIIGKLKTEKYGGRILEEIASYESD---PQKNNADGSKETKGNTVKK 691

Query: 81   LKTRKEALVVIESSGDET 28
            LKT+K  LVV+ESS DET
Sbjct: 692  LKTKK-TLVVLESSEDET 708


>ref|XP_002267000.2| PREDICTED: ATP-dependent DNA helicase Q-like 2-like [Vitis vinifera]
          Length = 711

 Score =  362 bits (929), Expect = 1e-97
 Identities = 199/319 (62%), Positives = 226/319 (70%), Gaps = 1/319 (0%)
 Frame = -2

Query: 981  SYYQESGRAGRDGLPSECLLYFRPADVPRQSSMVFYENSGLQNLYDIVRYCLSKRQCRRG 802
            +YYQESGRAGRDGLPSECLLYFRP DVPRQSSMVFYENSGLQNLYDIV+YC SKR+CRR 
Sbjct: 396  TYYQESGRAGRDGLPSECLLYFRPGDVPRQSSMVFYENSGLQNLYDIVQYCQSKRECRRN 455

Query: 801  AFFRHFAEPLQDCNGMCDNCASYNEINELDVSGHAKSIVSFLQEMQENDQRVTMLQLVDX 622
            AFFRHFAEPLQDCNGMCDNCA   E+ E+DVS  AK+++S LQ+MQ+NDQR+TMLQ+VD 
Sbjct: 456  AFFRHFAEPLQDCNGMCDNCAFSTEVKEVDVSCLAKAMISLLQDMQDNDQRLTMLQMVD- 514

Query: 621  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEEFQHTAYATNAYVTIGPLAKQVLHGK 442
                                            KEEFQHTAYATNAYVT+G L KQV HGK
Sbjct: 515  -KMKVKNKDLGSDLRKEEIEHLVIQLIRDRVLKEEFQHTAYATNAYVTLGLLWKQVSHGK 573

Query: 441  KIVKLEIHCGQKSSSTNSNTHKRG-KSSALEYKLDELRKELASLDGGIFPHSVLSTQQIG 265
            +IVKLEI    K+ + N  + KR   SS LE KLDELRKEL+S  GGIFPHSVLSTQQI 
Sbjct: 574  RIVKLEISTKVKTKTGNMKSSKRSLTSSGLELKLDELRKELSSTHGGIFPHSVLSTQQIS 633

Query: 264  TLSANKPKSMEELEKIIGKLKSEKYGPRILKEINDYESNNPMXXXXXXXXXXXSAGRAVK 85
             LSA KP S+ ELE +IGKLK+EKYG +IL+EI  Y                 S  RA K
Sbjct: 634  ILSAQKPTSILELETMIGKLKTEKYGSKILEEIAKYTETEQPENRLKTDEGQGSENRAPK 693

Query: 84   KLKTRKEALVVIESSGDET 28
            +LK+ K A+V+IESSGDET
Sbjct: 694  RLKSNK-AVVLIESSGDET 711


>gb|EMJ10069.1| hypothetical protein PRUPE_ppa026000mg, partial [Prunus persica]
          Length = 308

 Score =  359 bits (921), Expect = 1e-96
 Identities = 194/314 (61%), Positives = 221/314 (70%)
 Frame = -2

Query: 969 ESGRAGRDGLPSECLLYFRPADVPRQSSMVFYENSGLQNLYDIVRYCLSKRQCRRGAFFR 790
           ESGRAGRDGLPS+CLLYFRP DVPRQSSMVFYENSGLQNLYDIVRYC SKRQCRR +FFR
Sbjct: 1   ESGRAGRDGLPSQCLLYFRPGDVPRQSSMVFYENSGLQNLYDIVRYCQSKRQCRRSSFFR 60

Query: 789 HFAEPLQDCNGMCDNCASYNEINELDVSGHAKSIVSFLQEMQENDQRVTMLQLVDXXXXX 610
           HFAEPLQDCNGMCDNCA  NE+ E+D S HAK I+S LQ+ QENDQR+T+LQLVD     
Sbjct: 61  HFAEPLQDCNGMCDNCAFSNEVKEVDASRHAKLIISLLQDTQENDQRLTVLQLVD--KIK 118

Query: 609 XXXXXXXXXXXXXXXXXXXXXXXXXXXXKEEFQHTAYATNAYVTIGPLAKQVLHGKKIVK 430
                                       KEEFQHTAY+TNAYVTIGPLA QVLHGK  VK
Sbjct: 119 AKHKELGSELKREEIEQLVIKLILDRSLKEEFQHTAYSTNAYVTIGPLANQVLHGKCSVK 178

Query: 429 LEIHCGQKSSSTNSNTHKRGKSSALEYKLDELRKELASLDGGIFPHSVLSTQQIGTLSAN 250
           LEI  GQ   +   +  +   SS LE KLDELRKEL+S+ GGIFPHSVLSTQQI  +SA 
Sbjct: 179 LEISSGQNKVAGIKSVKRSCASSGLELKLDELRKELSSVHGGIFPHSVLSTQQINMISAQ 238

Query: 249 KPKSMEELEKIIGKLKSEKYGPRILKEINDYESNNPMXXXXXXXXXXXSAGRAVKKLKTR 70
           KP SME LE IIGKLK+EKYG RIL+++N Y ++                 RA K+LK++
Sbjct: 239 KPNSMELLENIIGKLKAEKYGSRILEQVNTYANST---QPEDAKEDQDIENRASKRLKSK 295

Query: 69  KEALVVIESSGDET 28
           K  LV++ESS DE+
Sbjct: 296 KH-LVLVESSDDES 308


>emb|CBI29242.3| unnamed protein product [Vitis vinifera]
          Length = 710

 Score =  356 bits (913), Expect = 9e-96
 Identities = 199/320 (62%), Positives = 228/320 (71%), Gaps = 2/320 (0%)
 Frame = -2

Query: 981  SYYQESGRAGRDGLPSECLLYFRPADVPRQSSMVFYENSGLQNLYDIVRYCLSKRQCRRG 802
            +YYQESGRAGRDGLPSECLLYFRP DVPRQSSMVFYENSGLQNLYDIV+YC SKR+CRR 
Sbjct: 396  TYYQESGRAGRDGLPSECLLYFRPGDVPRQSSMVFYENSGLQNLYDIVQYCQSKRECRRN 455

Query: 801  AFFRHFAEPLQDCNGMCDNCASYNEINELDVSGHAKSIVSFLQEMQENDQRVTMLQLVDX 622
            AFFRHFAEPLQDCNGMCDNCA   E+ E+DVS  AK+++S LQ+MQ+NDQR+TMLQ+VD 
Sbjct: 456  AFFRHFAEPLQDCNGMCDNCAFSTEVKEVDVSCLAKAMISLLQDMQDNDQRLTMLQMVD- 514

Query: 621  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEEFQHTAYATNAYVTIGPLAKQVLHGK 442
                                            KEEFQHTAYATNAYVT+G L KQV HGK
Sbjct: 515  -KMKVKNKDLGSDLRKEEIEHLVIQLIRDRVLKEEFQHTAYATNAYVTLGLLWKQVSHGK 573

Query: 441  KIVKLEIHCGQKSSSTNSNTHKRG-KSSALEYKLDELRKELASLDGGIFPHSVLSTQQIG 265
            +IVKLEI    K+ + N  + KR   SS LE KLDELRKEL+S  GGIFPHSVLSTQQI 
Sbjct: 574  RIVKLEISTKVKTKTGNMKSSKRSLTSSGLELKLDELRKELSSTHGGIFPHSVLSTQQIS 633

Query: 264  TLSANKPKSMEELEKIIGKLKSEKYGPRILKEINDY-ESNNPMXXXXXXXXXXXSAGRAV 88
             LSA KP S+ E + +IGKLK+EKYG +IL+EI  Y E+  P            S  RA 
Sbjct: 634  ILSAQKPTSILEAKTMIGKLKTEKYGSKILEEIAKYTETEQP--ENVPPDDRQGSENRAP 691

Query: 87   KKLKTRKEALVVIESSGDET 28
            K+LK+ K A+V+IESSGDET
Sbjct: 692  KRLKSNK-AVVLIESSGDET 710


>gb|ESW30123.1| hypothetical protein PHAVU_002G126800g [Phaseolus vulgaris]
          Length = 702

 Score =  354 bits (908), Expect = 3e-95
 Identities = 190/317 (59%), Positives = 222/317 (70%)
 Frame = -2

Query: 981  SYYQESGRAGRDGLPSECLLYFRPADVPRQSSMVFYENSGLQNLYDIVRYCLSKRQCRRG 802
            +YYQESGRAGRDGLPSEC+LYFRP DVPRQSSMVFYENSGLQNLYDIVRYC SK+QCRR 
Sbjct: 394  TYYQESGRAGRDGLPSECILYFRPGDVPRQSSMVFYENSGLQNLYDIVRYCQSKKQCRRS 453

Query: 801  AFFRHFAEPLQDCNGMCDNCASYNEINELDVSGHAKSIVSFLQEMQENDQRVTMLQLVDX 622
            AFFRHFAEPLQ+CNGMCD CA   E+ E+DVS HAK +VS LQ+MQ NDQR TMLQLVD 
Sbjct: 454  AFFRHFAEPLQECNGMCDICAFSREVKEMDVSDHAKLMVSLLQDMQVNDQRSTMLQLVD- 512

Query: 621  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEEFQHTAYATNAYVTIGPLAKQVLHGK 442
                                            KEEFQHTAYATNAY+ +GPLAKQ+L GK
Sbjct: 513  -KMKIKQKKQGSELKREDNEQLILHLLLGRFLKEEFQHTAYATNAYIAVGPLAKQILQGK 571

Query: 441  KIVKLEIHCGQKSSSTNSNTHKRGKSSALEYKLDELRKELASLDGGIFPHSVLSTQQIGT 262
            K V LEI+   ++ +   +  +  +SS LE KLDELRKEL+S  GGI PHSVLST+QI  
Sbjct: 572  KSVTLEIYTEHRTKAALRSVKRSLESSDLELKLDELRKELSSAHGGILPHSVLSTEQISL 631

Query: 261  LSANKPKSMEELEKIIGKLKSEKYGPRILKEINDYESNNPMXXXXXXXXXXXSAGRAVKK 82
            LS+ KP S+E+LEK+IGKLK+EKYG RIL++I  Y  +              + GRA K+
Sbjct: 632  LSSQKPNSLEQLEKVIGKLKTEKYGNRILQQIEKYSDSE-------LTDKQETDGRAAKR 684

Query: 81   LKTRKEALVVIESSGDE 31
             KT+K  LV+IESS DE
Sbjct: 685  SKTKKN-LVLIESSEDE 700


>ref|XP_004512366.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            34-like [Cicer arietinum]
          Length = 704

 Score =  351 bits (901), Expect = 2e-94
 Identities = 192/317 (60%), Positives = 223/317 (70%)
 Frame = -2

Query: 981  SYYQESGRAGRDGLPSECLLYFRPADVPRQSSMVFYENSGLQNLYDIVRYCLSKRQCRRG 802
            +YYQESGRAGRDGLPSECLLYFRP DV RQSSMVFYENSGLQNLYDIVRYC SKRQCRR 
Sbjct: 397  TYYQESGRAGRDGLPSECLLYFRPGDVSRQSSMVFYENSGLQNLYDIVRYCQSKRQCRRS 456

Query: 801  AFFRHFAEPLQDCNGMCDNCASYNEINELDVSGHAKSIVSFLQEMQENDQRVTMLQLVDX 622
            AFFRHFAEPLQ+C+GMCD CA  +E+ E+DVS HAK +VS LQE+Q +DQR TMLQLVD 
Sbjct: 457  AFFRHFAEPLQECDGMCDICAFSSEVKEVDVSRHAKLMVSLLQEIQTSDQRSTMLQLVD- 515

Query: 621  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEEFQHTAYATNAYVTIGPLAKQVLHGK 442
                                            KEEFQHTAY+TNAY+T+GPLAKQ+L GK
Sbjct: 516  -KMKVKQKEIGSDLKREEMEQLILHLLLDRALKEEFQHTAYSTNAYITVGPLAKQILQGK 574

Query: 441  KIVKLEIHCGQKSSSTNSNTHKRGKSSALEYKLDELRKELASLDGGIFPHSVLSTQQIGT 262
            K VKLE+   +K+ ++       G SS LE KLDELRKEL+S+ GGI PHSVLSTQQI  
Sbjct: 575  KTVKLEVSTEKKTKASVRLKRCLG-SSGLELKLDELRKELSSIHGGILPHSVLSTQQISL 633

Query: 261  LSANKPKSMEELEKIIGKLKSEKYGPRILKEINDYESNNPMXXXXXXXXXXXSAGRAVKK 82
            L + KP S+E+LEK+IGKLK+EKYG +IL++I  Y    P              GRA K+
Sbjct: 634  LCSQKPNSLEQLEKVIGKLKTEKYGNKILEQIVKYSDFKPTDEQVSD-------GRAAKR 686

Query: 81   LKTRKEALVVIESSGDE 31
             KT+K  LV+IESSGDE
Sbjct: 687  SKTKKN-LVLIESSGDE 702


>ref|XP_002304389.1| DNA helicase family protein [Populus trichocarpa]
            gi|222841821|gb|EEE79368.1| DNA helicase family protein
            [Populus trichocarpa]
          Length = 718

 Score =  351 bits (901), Expect = 2e-94
 Identities = 195/323 (60%), Positives = 225/323 (69%), Gaps = 6/323 (1%)
 Frame = -2

Query: 981  SYYQESGRAGRDGLPSECLLYFRPADVPRQSSMVFYENSGLQNLYDIVRYCLSKRQCRRG 802
            +YYQESGRAGRDGLPSEC+L++RPADVPRQSSMVFYENSGLQNLYDIVRYC SKRQCRR 
Sbjct: 400  TYYQESGRAGRDGLPSECVLFYRPADVPRQSSMVFYENSGLQNLYDIVRYCQSKRQCRRN 459

Query: 801  AFFRHFAEPLQDCNGMCDNCASYNEINELDVSGHAKSIVSFLQEMQENDQRVTMLQLVDX 622
            AFFRHFAEPLQDCNGMCDNCA  +E+ E+DVS HAK +VS LQ+ QE DQR+TMLQLVD 
Sbjct: 460  AFFRHFAEPLQDCNGMCDNCAFLSEVMEVDVSRHAKVMVSLLQDTQEKDQRLTMLQLVDK 519

Query: 621  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEEFQHTAYATNAYVTIGPLAKQVLHGK 442
                                             EE+QHTAYATNAYVTIGPLA QVL GK
Sbjct: 520  MKNKKELGSDIKKEEMEQLVIQLILDFVFK---EEYQHTAYATNAYVTIGPLANQVLQGK 576

Query: 441  KIVKLEIHCGQKSSSTNSNTHKRGKS-SALEYKLDELRKELASLDGGIFPHSVLSTQQIG 265
            KIVKLEI   QK+   +  + K   + S LE KLDELR++L+S  GGIFPHSVLS+QQ+ 
Sbjct: 577  KIVKLEISSKQKNKGDSMKSAKHSLAFSGLELKLDELREKLSSGHGGIFPHSVLSSQQMS 636

Query: 264  TLSANKPKSMEE-----LEKIIGKLKSEKYGPRILKEINDYESNNPMXXXXXXXXXXXSA 100
             +S+ KP S +E     LEKIIGKLK+EKYG +IL EI  Y  + P            S 
Sbjct: 637  MISSQKPSSAQEASPYHLEKIIGKLKTEKYGSKILDEIKKYTGSEP-PDNGMLNEEEGSG 695

Query: 99   GRAVKKLKTRKEALVVIESSGDE 31
             RA K+LKT+K  +VVIESS +E
Sbjct: 696  NRASKRLKTKK-GIVVIESSDEE 717


>ref|XP_006471563.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            34-like isoform X2 [Citrus sinensis]
          Length = 567

 Score =  350 bits (899), Expect = 4e-94
 Identities = 187/317 (58%), Positives = 223/317 (70%), Gaps = 1/317 (0%)
 Frame = -2

Query: 981  SYYQESGRAGRDGLPSECLLYFRPADVPRQSSMVFYENSGLQNLYDIVRYCLSKRQCRRG 802
            +YYQESGRAGRDGLPSECLL+FRPADVPRQSSMVFYENSGLQNLYDIVRY  SK+QCRR 
Sbjct: 250  TYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQNLYDIVRYSQSKKQCRRS 309

Query: 801  AFFRHFAEPLQDCNGMCDNCASYNEINELDVSGHAKSIVSFLQEMQENDQRVTMLQLVDX 622
             FFRHFAEPLQDCNGMCD CA   E+NE+DV+ HA+ I+S LQ++Q+N+QR+TMLQLVD 
Sbjct: 310  TFFRHFAEPLQDCNGMCDICAFSYEVNEVDVTRHAQCIISLLQDIQDNNQRLTMLQLVD- 368

Query: 621  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEEFQHTAYATNAYVTIGPLAKQVLHGK 442
                                             EEFQHTAY+TNAYVTIGPLAK VL GK
Sbjct: 369  -KMKIKLKEIDSDLKREEIEQLVLQLIIDRVLSEEFQHTAYSTNAYVTIGPLAKLVLQGK 427

Query: 441  KIVKLEIHCGQKSSSTNSNTHKRG-KSSALEYKLDELRKELASLDGGIFPHSVLSTQQIG 265
            KI+KLEI   QK+++ N  + KR   SSALE++LDELRKELAS+ GGI PHSVLS+Q I 
Sbjct: 428  KIIKLEISSVQKNTADNKKSTKRSLTSSALEFELDELRKELASISGGILPHSVLSSQLIR 487

Query: 264  TLSANKPKSMEELEKIIGKLKSEKYGPRILKEINDYESNNPMXXXXXXXXXXXSAGRAVK 85
             +SA KP +MEELEKIIGKLK+ KYG RIL+ I+   ++                G    
Sbjct: 488  LISARKPSTMEELEKIIGKLKTGKYGSRILEVISKCGNSEQQHDNNAVSKEEQGRGARAS 547

Query: 84   KLKTRKEALVVIESSGD 34
            K   +++A+VV++SS D
Sbjct: 548  KRTKKEKAVVVVDSSDD 564


>ref|XP_006471562.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            34-like isoform X1 [Citrus sinensis]
          Length = 715

 Score =  350 bits (899), Expect = 4e-94
 Identities = 187/317 (58%), Positives = 223/317 (70%), Gaps = 1/317 (0%)
 Frame = -2

Query: 981  SYYQESGRAGRDGLPSECLLYFRPADVPRQSSMVFYENSGLQNLYDIVRYCLSKRQCRRG 802
            +YYQESGRAGRDGLPSECLL+FRPADVPRQSSMVFYENSGLQNLYDIVRY  SK+QCRR 
Sbjct: 398  TYYQESGRAGRDGLPSECLLFFRPADVPRQSSMVFYENSGLQNLYDIVRYSQSKKQCRRS 457

Query: 801  AFFRHFAEPLQDCNGMCDNCASYNEINELDVSGHAKSIVSFLQEMQENDQRVTMLQLVDX 622
             FFRHFAEPLQDCNGMCD CA   E+NE+DV+ HA+ I+S LQ++Q+N+QR+TMLQLVD 
Sbjct: 458  TFFRHFAEPLQDCNGMCDICAFSYEVNEVDVTRHAQCIISLLQDIQDNNQRLTMLQLVD- 516

Query: 621  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEEFQHTAYATNAYVTIGPLAKQVLHGK 442
                                             EEFQHTAY+TNAYVTIGPLAK VL GK
Sbjct: 517  -KMKIKLKEIDSDLKREEIEQLVLQLIIDRVLSEEFQHTAYSTNAYVTIGPLAKLVLQGK 575

Query: 441  KIVKLEIHCGQKSSSTNSNTHKRG-KSSALEYKLDELRKELASLDGGIFPHSVLSTQQIG 265
            KI+KLEI   QK+++ N  + KR   SSALE++LDELRKELAS+ GGI PHSVLS+Q I 
Sbjct: 576  KIIKLEISSVQKNTADNKKSTKRSLTSSALEFELDELRKELASISGGILPHSVLSSQLIR 635

Query: 264  TLSANKPKSMEELEKIIGKLKSEKYGPRILKEINDYESNNPMXXXXXXXXXXXSAGRAVK 85
             +SA KP +MEELEKIIGKLK+ KYG RIL+ I+   ++                G    
Sbjct: 636  LISARKPSTMEELEKIIGKLKTGKYGSRILEVISKCGNSEQQHDNNAVSKEEQGRGARAS 695

Query: 84   KLKTRKEALVVIESSGD 34
            K   +++A+VV++SS D
Sbjct: 696  KRTKKEKAVVVVDSSDD 712


>ref|XP_004301675.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            34-like [Fragaria vesca subsp. vesca]
          Length = 708

 Score =  348 bits (893), Expect = 2e-93
 Identities = 188/319 (58%), Positives = 225/319 (70%), Gaps = 1/319 (0%)
 Frame = -2

Query: 981  SYYQESGRAGRDGLPSECLLYFRPADVPRQSSMVFYENSGLQNLYDIVRYCLSKRQCRRG 802
            +YYQESGRAGRDGLPS+CLLYFRPAD+PRQSSMVFYEN GLQNLYDIVRYC SKRQCRR 
Sbjct: 398  TYYQESGRAGRDGLPSQCLLYFRPADMPRQSSMVFYENCGLQNLYDIVRYCQSKRQCRRS 457

Query: 801  AFFRHFAEPLQDCNGMCDNCASYNEINELDVSGHAKSIVSFLQEMQENDQRVTMLQLVDX 622
            +FFRHFAEPLQDCNGMCDNCA  NE+ E+DVS HAK +V+ L+++QEN+QR+T+LQLVD 
Sbjct: 458  SFFRHFAEPLQDCNGMCDNCAFSNEVKEVDVSRHAKLMVTLLKDVQENEQRLTVLQLVD- 516

Query: 621  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEEFQHTAYATNAYVTIGPLAKQVLHGK 442
                                            KEEFQHTAY+TNAYVT+GPLAKQVL G+
Sbjct: 517  -KIKIKHKEVGSELKREEIEQLVIQLILGRVLKEEFQHTAYSTNAYVTLGPLAKQVLQGR 575

Query: 441  KIVKLEIHCGQKSSSTNSNTHKRGKSSALEYKLDELRKELASLDGGIFPHSVLSTQQIGT 262
              VKLE+  GQK  +   +  +   SS LE KLDELRKEL+S  GGIFPHSVLSTQQI  
Sbjct: 576  SSVKLEMSTGQKKVAGVRSVKRSRASSCLEQKLDELRKELSSDHGGIFPHSVLSTQQISM 635

Query: 261  LSANKPKSMEELEKIIGKLKSEKYGPRILKEINDY-ESNNPMXXXXXXXXXXXSAGRAVK 85
            +   KP SME+LEKIIGK+K+EKYG RIL++++ Y ++  P+              R+ K
Sbjct: 636  IDDQKPNSMEQLEKIIGKVKTEKYGSRILEQVSMYADAKQPVEDKEEQETER----RSSK 691

Query: 84   KLKTRKEALVVIESSGDET 28
            +LK  +  L  IESS DE+
Sbjct: 692  RLKNTEPLL--IESSDDES 708


>ref|XP_002519863.1| DNA helicase recq1, putative [Ricinus communis]
            gi|223540909|gb|EEF42467.1| DNA helicase recq1, putative
            [Ricinus communis]
          Length = 714

 Score =  347 bits (890), Expect = 4e-93
 Identities = 188/317 (59%), Positives = 219/317 (69%)
 Frame = -2

Query: 981  SYYQESGRAGRDGLPSECLLYFRPADVPRQSSMVFYENSGLQNLYDIVRYCLSKRQCRRG 802
            +YYQESGRAGRDG PSEC+L+FRP DVPRQSSMVFYENSGLQNLYDIVRYC SKR CRR 
Sbjct: 403  TYYQESGRAGRDGAPSECVLFFRPGDVPRQSSMVFYENSGLQNLYDIVRYCQSKRTCRRS 462

Query: 801  AFFRHFAEPLQDCNGMCDNCASYNEINELDVSGHAKSIVSFLQEMQENDQRVTMLQLVDX 622
            AFFRHF+EPLQDCNGMCDNCA  NE+ E+DV+ HAK++VS LQ+M +NDQR+TMLQLVD 
Sbjct: 463  AFFRHFSEPLQDCNGMCDNCAFSNEVMEVDVTSHAKTMVSLLQDMHDNDQRLTMLQLVD- 521

Query: 621  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEEFQHTAYATNAYVTIGPLAKQVLHGK 442
                                            KEEFQHTAYATNAYV  GPLAKQVL G+
Sbjct: 522  -KVKNKHKELGADLKREEIEQLVIQLILDNVFKEEFQHTAYATNAYVKTGPLAKQVLQGR 580

Query: 441  KIVKLEIHCGQKSSSTNSNTHKRGKSSALEYKLDELRKELASLDGGIFPHSVLSTQQIGT 262
            KIVKLEI   Q      +   +    S LE+KLD+LRKEL++   GI PHSVLS+QQ+  
Sbjct: 581  KIVKLEISNKQNKDGKMNKAKRSLMLSGLEFKLDKLRKELSAEHEGILPHSVLSSQQMSM 640

Query: 261  LSANKPKSMEELEKIIGKLKSEKYGPRILKEINDYESNNPMXXXXXXXXXXXSAGRAVKK 82
            +SA KP S EELEKIIGKLK+E+YG RIL+EI  +  +N                R  K+
Sbjct: 641  ISAQKPNSTEELEKIIGKLKTERYGNRILEEIKKFAGSNESDNGILNDEGSKR--RPSKR 698

Query: 81   LKTRKEALVVIESSGDE 31
            LKT+K+ LV+IESS DE
Sbjct: 699  LKTKKD-LVLIESSDDE 714


>ref|XP_003612577.1| ATP-dependent DNA helicase RecQ family protein expressed [Medicago
            truncatula] gi|355513912|gb|AES95535.1| ATP-dependent DNA
            helicase RecQ family protein expressed [Medicago
            truncatula]
          Length = 685

 Score =  347 bits (889), Expect = 6e-93
 Identities = 193/320 (60%), Positives = 223/320 (69%), Gaps = 3/320 (0%)
 Frame = -2

Query: 981  SYYQESGRAGRDGLPSECLLYFRPADVPRQSSMVFYENSGLQNLYDIVRYCLSKRQCRRG 802
            +YYQESGRAGRDGLPSECLLYFRP DVPRQSSMVFYENSGLQNLYDIVRYC SKRQCRR 
Sbjct: 379  TYYQESGRAGRDGLPSECLLYFRPGDVPRQSSMVFYENSGLQNLYDIVRYCQSKRQCRRS 438

Query: 801  AFFRHFAEPLQDCNGMCDNCASYNEINELDVSGHAKSIVSFLQEMQENDQRVTMLQLVDX 622
            AFFRHFAEPLQ+CNGMCD CA   E+NE+DVS HAK +VS LQ++Q +DQR TMLQLV+ 
Sbjct: 439  AFFRHFAEPLQECNGMCDICAFSCEVNEVDVSRHAKLMVSLLQDIQASDQRSTMLQLVE- 497

Query: 621  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEEFQHTAYATNAYVTIGPLAKQVLHGK 442
                                            KEEFQHTAY+TNAY+T+GPLAKQ+L GK
Sbjct: 498  -KMKTKQKEIGSYLKREEMEQLILHLLLERALKEEFQHTAYSTNAYITVGPLAKQILQGK 556

Query: 441  KIVKLEIHCGQKSSSTNSNTHKRGKSSALEYKLDELRKELASLDGGIFPHSVLSTQQIGT 262
            K VKLEI   +K+ ++       G SS LE KLDELRKEL+S  GGI PHSVLSTQQI  
Sbjct: 557  KTVKLEISTEEKTKASARLKRSLG-SSGLELKLDELRKELSSNHGGILPHSVLSTQQISL 615

Query: 261  LSANKPKSMEELEKIIGKLKSEKYGPRILKEI---NDYESNNPMXXXXXXXXXXXSAGRA 91
            L + KP S+EELEK IGKLK+EKYG +IL +I   +D+E  +               GRA
Sbjct: 616  LCSQKPNSLEELEKAIGKLKTEKYGNKILAQIVKYSDFELTDEQVND----------GRA 665

Query: 90   VKKLKTRKEALVVIESSGDE 31
             K+ KT+K  LV+IE+S DE
Sbjct: 666  AKRSKTKKN-LVLIETSEDE 684


>ref|XP_003534325.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            34-like isoform X1 [Glycine max]
          Length = 695

 Score =  345 bits (886), Expect = 1e-92
 Identities = 187/312 (59%), Positives = 216/312 (69%)
 Frame = -2

Query: 981  SYYQESGRAGRDGLPSECLLYFRPADVPRQSSMVFYENSGLQNLYDIVRYCLSKRQCRRG 802
            +YYQESGRAGRDGLPSECLLYFRP D PRQSSMVFYENSGLQNLYDIVRYCLSKRQCRR 
Sbjct: 394  TYYQESGRAGRDGLPSECLLYFRPGDAPRQSSMVFYENSGLQNLYDIVRYCLSKRQCRRS 453

Query: 801  AFFRHFAEPLQDCNGMCDNCASYNEINELDVSGHAKSIVSFLQEMQENDQRVTMLQLVDX 622
            AFF HFAEPLQ+CNGMCD CA  +E+ E+DVSGHAK +VS LQ+MQ NDQR TMLQLVD 
Sbjct: 454  AFFHHFAEPLQECNGMCDICAFSSEVKEVDVSGHAKLMVSLLQDMQANDQRSTMLQLVD- 512

Query: 621  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEEFQHTAYATNAYVTIGPLAKQVLHGK 442
                                            KEEFQHT YATNAY+ +G LAKQ+L GK
Sbjct: 513  -KMKIKQKELGSELKREEIEQLILHLLLARFLKEEFQHTPYATNAYIAVGSLAKQILQGK 571

Query: 441  KIVKLEIHCGQKSSSTNSNTHKRGKSSALEYKLDELRKELASLDGGIFPHSVLSTQQIGT 262
            K VKLEI+  Q++     +  +   SS LE KLDELRKEL+S  GGI PHSVLST+QI  
Sbjct: 572  KSVKLEIYTEQRTKDGVRSAKQCLGSSGLELKLDELRKELSSAHGGILPHSVLSTEQIIQ 631

Query: 261  LSANKPKSMEELEKIIGKLKSEKYGPRILKEINDYESNNPMXXXXXXXXXXXSAGRAVKK 82
            L++ KP S+E+LEK+IGKL++EKYG RILK+I  Y    P               RA K+
Sbjct: 632  LASQKPNSLEQLEKLIGKLRTEKYGNRILKQIEKYYDFEPTDKQEID-------ARAAKR 684

Query: 81   LKTRKEALVVIE 46
            LK++K  LV+IE
Sbjct: 685  LKSKKN-LVIIE 695


>gb|EOY25440.1| RECQ helicase L2 isoform 1 [Theobroma cacao]
          Length = 709

 Score =  337 bits (865), Expect = 3e-90
 Identities = 183/318 (57%), Positives = 216/318 (67%), Gaps = 1/318 (0%)
 Frame = -2

Query: 981  SYYQESGRAGRDGLPSECLLYFRPADVPRQSSMVFYENSGLQNLYDIVRYCLSKRQCRRG 802
            +YYQESGRAGRDGLPSECL++FRPADVPRQSSMVFYE SGLQNLYDIVRYC SKRQC RG
Sbjct: 395  TYYQESGRAGRDGLPSECLIFFRPADVPRQSSMVFYEKSGLQNLYDIVRYCQSKRQCHRG 454

Query: 801  AFFRHFAEPLQDCNGMCDNCASYNEINELDVSGHAKSIVSFLQEMQENDQRVTMLQLVDX 622
            AFF+HFAEPLQ+CNGMCD+CA  +E+ E+D S  AK ++S + +MQEN+QRVTMLQLVD 
Sbjct: 455  AFFQHFAEPLQECNGMCDSCAFSSEVKEVDASCQAKLMISLVHDMQENNQRVTMLQLVD- 513

Query: 621  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEEFQHTAYATNAYVTIGPLAKQVLHGK 442
                                            KE+FQHTAYATNAY+T+G  A Q+L GK
Sbjct: 514  -RVKNKQKQLDLKLKREELEQLVVQLILDRVLKEDFQHTAYATNAYITVGTSANQILQGK 572

Query: 441  KIVKLEIHCGQKSSSTNSNTHKRGKSSALEYKLDELRKELASL-DGGIFPHSVLSTQQIG 265
            KIVK+E+    K   +   + K G +S LE+KLDELRKELAS  +G IFPHSVLS QQI 
Sbjct: 573  KIVKMEVAGRSKVMDSYRKSIKHGVTSGLEFKLDELRKELASSHNGEIFPHSVLSGQQIS 632

Query: 264  TLSANKPKSMEELEKIIGKLKSEKYGPRILKEINDYESNNPMXXXXXXXXXXXSAGRAVK 85
             +S  KP S EELE IIGKLK+EKYG RIL E+  Y     +              R  K
Sbjct: 633  IISTKKPSSTEELEMIIGKLKTEKYGDRILGEVKKYGIAEQLNDNVLEEEQGTEK-RPRK 691

Query: 84   KLKTRKEALVVIESSGDE 31
            KLKT++E +V+ ESS DE
Sbjct: 692  KLKTKEEVVVLTESSNDE 709


>ref|XP_006854226.1| hypothetical protein AMTR_s00048p00224070 [Amborella trichopoda]
            gi|548857895|gb|ERN15693.1| hypothetical protein
            AMTR_s00048p00224070 [Amborella trichopoda]
          Length = 713

 Score =  335 bits (860), Expect = 1e-89
 Identities = 186/322 (57%), Positives = 213/322 (66%), Gaps = 5/322 (1%)
 Frame = -2

Query: 981  SYYQESGRAGRDGLPSECLLYFRPADVPRQSSMVFYENSGLQNLYDIVRYCLSKRQCRRG 802
            +YYQESGRAGRDGLP++CLL+FRP DVPRQSSMVFYENSGLQNLYDIVR+C SKR CRR 
Sbjct: 394  TYYQESGRAGRDGLPADCLLFFRPGDVPRQSSMVFYENSGLQNLYDIVRFCQSKRSCRRN 453

Query: 801  AFFRHFAEPLQDCNGMCDNCASYNEINELDVSGHAKSIVSFLQEMQENDQRVTMLQLVD- 625
            AFF HF EPLQDCNGMCDNCA   E  E+D S  AK IVS L+EMQENDQR TMLQLVD 
Sbjct: 454  AFFHHFGEPLQDCNGMCDNCAHPTETKEVDASTQAKIIVSLLKEMQENDQRATMLQLVDK 513

Query: 624  ---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEEFQHTAYATNAYVTIGPLAKQV 454
                                                KEEFQHTAY+TNAYVTIGPL KQ+
Sbjct: 514  LKVNSRGSGGATPTIPDLKREELEQLIVQLVLDRVLKEEFQHTAYSTNAYVTIGPLWKQL 573

Query: 453  LHGKKIVKLEIHCGQKSSSTNSNTHKRGKSSALEYKLDELRKELASLDGGIFPHSVLSTQ 274
            + GKK+VKLEI    + S TN    K    + LE KLD+ RKEL+S  GGIFPH+VLSTQ
Sbjct: 574  VQGKKMVKLEISVNSRGSRTNIKAVKCKHLAGLELKLDDFRKELSSCHGGIFPHAVLSTQ 633

Query: 273  QIGTLSANKPKSMEELEKIIGKLKSEKYGPRILKEINDY-ESNNPMXXXXXXXXXXXSAG 97
            QI TLS  +P S+E+LEK+IGK K+EKYG RIL  I  Y E+  P               
Sbjct: 634  QISTLSTERPDSLEQLEKLIGKTKTEKYGERILDCIRQYVETEVP---NGSVKEGDSIQH 690

Query: 96   RAVKKLKTRKEALVVIESSGDE 31
            R  K+ KT+K AL+ I++S DE
Sbjct: 691  RPTKRAKTKK-ALINIDTSEDE 711


>ref|XP_006587645.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            34-like isoform X2 [Glycine max]
          Length = 690

 Score =  328 bits (841), Expect = 2e-87
 Identities = 182/312 (58%), Positives = 211/312 (67%)
 Frame = -2

Query: 981  SYYQESGRAGRDGLPSECLLYFRPADVPRQSSMVFYENSGLQNLYDIVRYCLSKRQCRRG 802
            +YYQESGRAGRDGLPSECLLYFRP D PRQSSMVFYENSGLQNLYDI     SKRQCRR 
Sbjct: 394  TYYQESGRAGRDGLPSECLLYFRPGDAPRQSSMVFYENSGLQNLYDI-----SKRQCRRS 448

Query: 801  AFFRHFAEPLQDCNGMCDNCASYNEINELDVSGHAKSIVSFLQEMQENDQRVTMLQLVDX 622
            AFF HFAEPLQ+CNGMCD CA  +E+ E+DVSGHAK +VS LQ+MQ NDQR TMLQLVD 
Sbjct: 449  AFFHHFAEPLQECNGMCDICAFSSEVKEVDVSGHAKLMVSLLQDMQANDQRSTMLQLVD- 507

Query: 621  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEEFQHTAYATNAYVTIGPLAKQVLHGK 442
                                            KEEFQHT YATNAY+ +G LAKQ+L GK
Sbjct: 508  -KMKIKQKELGSELKREEIEQLILHLLLARFLKEEFQHTPYATNAYIAVGSLAKQILQGK 566

Query: 441  KIVKLEIHCGQKSSSTNSNTHKRGKSSALEYKLDELRKELASLDGGIFPHSVLSTQQIGT 262
            K VKLEI+  Q++     +  +   SS LE KLDELRKEL+S  GGI PHSVLST+QI  
Sbjct: 567  KSVKLEIYTEQRTKDGVRSAKQCLGSSGLELKLDELRKELSSAHGGILPHSVLSTEQIIQ 626

Query: 261  LSANKPKSMEELEKIIGKLKSEKYGPRILKEINDYESNNPMXXXXXXXXXXXSAGRAVKK 82
            L++ KP S+E+LEK+IGKL++EKYG RILK+I  Y    P               RA K+
Sbjct: 627  LASQKPNSLEQLEKLIGKLRTEKYGNRILKQIEKYYDFEPTDKQEID-------ARAAKR 679

Query: 81   LKTRKEALVVIE 46
            LK++K  LV+IE
Sbjct: 680  LKSKKN-LVIIE 690


>ref|NP_001077639.1| mediator of RNA polymerase II transcription subunit 34 [Arabidopsis
            thaliana] gi|332193226|gb|AEE31347.1| mediator of RNA
            polymerase II transcription subunit 34 [Arabidopsis
            thaliana]
          Length = 580

 Score =  320 bits (821), Expect = 4e-85
 Identities = 175/317 (55%), Positives = 214/317 (67%)
 Frame = -2

Query: 981  SYYQESGRAGRDGLPSECLLYFRPADVPRQSSMVFYENSGLQNLYDIVRYCLSKRQCRRG 802
            +YYQESGRAGRDGLPSEC+L+FR ADVPRQSSMVFYE SGLQNLYDIVRYC SK +CRR 
Sbjct: 271  TYYQESGRAGRDGLPSECILFFRSADVPRQSSMVFYEYSGLQNLYDIVRYCQSKTKCRRS 330

Query: 801  AFFRHFAEPLQDCNGMCDNCASYNEINELDVSGHAKSIVSFLQEMQENDQRVTMLQLVDX 622
            AFFRHF EP QDCNGMCDNCA  +E+ E+DVS  +K +VS +QE Q  DQRVTMLQL D 
Sbjct: 331  AFFRHFGEPSQDCNGMCDNCALSSEVKEVDVSDLSKLVVSMVQETQAKDQRVTMLQLGD- 389

Query: 621  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEEFQHTAYATNAYVTIGPLAKQVLHGK 442
                                            KEEFQHT Y+TNAYVT+GPLA Q+L G+
Sbjct: 390  -KLRNKHKDLIAELKRDEVEHLVIKLIVDSVLKEEFQHTPYSTNAYVTMGPLANQLLQGR 448

Query: 441  KIVKLEIHCGQKSSSTNSNTHKRGKSSALEYKLDELRKELASLDGGIFPHSVLSTQQIGT 262
            K +K+E    Q      S T      S LE KLDELRKE+++ DG I PH+VLSTQQIG+
Sbjct: 449  KTIKMETSSRQTKKLKRSITF-----SGLELKLDELRKEISAADGSILPHTVLSTQQIGS 503

Query: 261  LSANKPKSMEELEKIIGKLKSEKYGPRILKEINDYESNNPMXXXXXXXXXXXSAGRAVKK 82
            +S+ KP S++ELE IIGKLK+EKYG RIL+E+  +E+ +              + R  K+
Sbjct: 504  ISSQKPVSLQELESIIGKLKTEKYGDRILEEVMRHEAVSEQLVEDPTKEETCKS-RLRKR 562

Query: 81   LKTRKEALVVIESSGDE 31
             KT+K+ +V++ESSG+E
Sbjct: 563  AKTQKD-VVLVESSGEE 578


>ref|NP_174421.2| mediator of RNA polymerase II transcription subunit 34 [Arabidopsis
            thaliana] gi|75334308|sp|Q9FT73.1|MED34_ARATH RecName:
            Full=Mediator of RNA polymerase II transcription subunit
            34; AltName: Full=ATP-dependent DNA helicase Q-like 2;
            AltName: Full=RecQ-like protein 2; Short=AtRecQ2;
            Short=AtRecQl2 gi|11121445|emb|CAC14866.1| DNA Helicase
            [Arabidopsis thaliana] gi|332193225|gb|AEE31346.1|
            mediator of RNA polymerase II transcription subunit 34
            [Arabidopsis thaliana]
          Length = 705

 Score =  320 bits (821), Expect = 4e-85
 Identities = 175/317 (55%), Positives = 214/317 (67%)
 Frame = -2

Query: 981  SYYQESGRAGRDGLPSECLLYFRPADVPRQSSMVFYENSGLQNLYDIVRYCLSKRQCRRG 802
            +YYQESGRAGRDGLPSEC+L+FR ADVPRQSSMVFYE SGLQNLYDIVRYC SK +CRR 
Sbjct: 396  TYYQESGRAGRDGLPSECILFFRSADVPRQSSMVFYEYSGLQNLYDIVRYCQSKTKCRRS 455

Query: 801  AFFRHFAEPLQDCNGMCDNCASYNEINELDVSGHAKSIVSFLQEMQENDQRVTMLQLVDX 622
            AFFRHF EP QDCNGMCDNCA  +E+ E+DVS  +K +VS +QE Q  DQRVTMLQL D 
Sbjct: 456  AFFRHFGEPSQDCNGMCDNCALSSEVKEVDVSDLSKLVVSMVQETQAKDQRVTMLQLGD- 514

Query: 621  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEEFQHTAYATNAYVTIGPLAKQVLHGK 442
                                            KEEFQHT Y+TNAYVT+GPLA Q+L G+
Sbjct: 515  -KLRNKHKDLIAELKRDEVEHLVIKLIVDSVLKEEFQHTPYSTNAYVTMGPLANQLLQGR 573

Query: 441  KIVKLEIHCGQKSSSTNSNTHKRGKSSALEYKLDELRKELASLDGGIFPHSVLSTQQIGT 262
            K +K+E    Q      S T      S LE KLDELRKE+++ DG I PH+VLSTQQIG+
Sbjct: 574  KTIKMETSSRQTKKLKRSITF-----SGLELKLDELRKEISAADGSILPHTVLSTQQIGS 628

Query: 261  LSANKPKSMEELEKIIGKLKSEKYGPRILKEINDYESNNPMXXXXXXXXXXXSAGRAVKK 82
            +S+ KP S++ELE IIGKLK+EKYG RIL+E+  +E+ +              + R  K+
Sbjct: 629  ISSQKPVSLQELESIIGKLKTEKYGDRILEEVMRHEAVSEQLVEDPTKEETCKS-RLRKR 687

Query: 81   LKTRKEALVVIESSGDE 31
             KT+K+ +V++ESSG+E
Sbjct: 688  AKTQKD-VVLVESSGEE 703


>ref|XP_002893846.1| RECQL2 [Arabidopsis lyrata subsp. lyrata] gi|297339688|gb|EFH70105.1|
            RECQL2 [Arabidopsis lyrata subsp. lyrata]
          Length = 704

 Score =  319 bits (817), Expect = 1e-84
 Identities = 175/318 (55%), Positives = 217/318 (68%), Gaps = 1/318 (0%)
 Frame = -2

Query: 981  SYYQESGRAGRDGLPSECLLYFRPADVPRQSSMVFYENSGLQNLYDIVRYCLSKRQCRRG 802
            +YYQESGRAGRDGLPSEC+L+FR ADVPRQSSMVFYE SGLQNLYDIVRYC SK +CRR 
Sbjct: 395  TYYQESGRAGRDGLPSECILFFRSADVPRQSSMVFYEYSGLQNLYDIVRYCQSKTKCRRS 454

Query: 801  AFFRHFAEPLQDCNGMCDNCASYNEINELDVSGHAKSIVSFLQEMQENDQRVTMLQLVDX 622
            AFFRHF EP QDCNGMCDNCA  +E+ E+DVS  +K +VS +QE Q  DQRVTMLQL D 
Sbjct: 455  AFFRHFGEPSQDCNGMCDNCALSSEVKEVDVSDLSKLVVSMVQETQSKDQRVTMLQLGD- 513

Query: 621  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEEFQHTAYATNAYVTIGPLAKQVLHGK 442
                                            KEEFQHT Y+TNAYVT+GPLA Q+L G+
Sbjct: 514  -KLRNKHKDLSAELKRDEIEHLVIKLIVDSVLKEEFQHTPYSTNAYVTMGPLANQLLQGR 572

Query: 441  KIVKLEIHCGQKSSSTNSNTHKRGKS-SALEYKLDELRKELASLDGGIFPHSVLSTQQIG 265
            K +K+E      +SS  +   KR  S S LE  LDELRKE+++ DG I PH+VLSTQQI 
Sbjct: 573  KTIKME------TSSRQTKKPKRSLSFSGLELNLDELRKEISAADGSILPHTVLSTQQIS 626

Query: 264  TLSANKPKSMEELEKIIGKLKSEKYGPRILKEINDYESNNPMXXXXXXXXXXXSAGRAVK 85
             +S+ KP S++ELE IIGKLK+EKYG RIL+E+  +E+ +             ++ R+ K
Sbjct: 627  LISSQKPVSLQELESIIGKLKTEKYGDRILEEVMRHEAVSEQLVEDPTKEETCNS-RSRK 685

Query: 84   KLKTRKEALVVIESSGDE 31
            + KT+K+A +++ESSG+E
Sbjct: 686  RAKTQKDA-ILVESSGEE 702