BLASTX nr result

ID: Rehmannia23_contig00020229 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00020229
         (389 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK24606.1| unknown [Picea sitchensis]                              75   1e-11
ref|XP_006360499.1| PREDICTED: ribosome-recycling factor, chloro...    74   2e-11
ref|XP_004250014.1| PREDICTED: ribosome-recycling factor-like [S...    74   2e-11
gb|ABR18224.1| unknown [Picea sitchensis]                              73   3e-11
ref|XP_002509550.1| ribosome recycling factor, putative [Ricinus...    71   1e-10
ref|XP_002263449.1| PREDICTED: ribosome-recycling factor [Vitis ...    70   2e-10
emb|CAN68423.1| hypothetical protein VITISV_018268 [Vitis vinifera]    70   2e-10
ref|XP_006857385.1| hypothetical protein AMTR_s00067p00134010 [A...    70   4e-10
dbj|BAD44436.1| putative ribosome recycling factor [Arabidopsis ...    69   8e-10
ref|NP_186829.3| ribosome recycling factor [Arabidopsis thaliana...    69   8e-10
ref|XP_002884259.1| hypothetical protein ARALYDRAFT_317013 [Arab...    69   8e-10
gb|AAF03454.1|AC010797_30 putative ribosome recycling factor [Ar...    69   8e-10
ref|XP_004976031.1| PREDICTED: ribosome-recycling factor, chloro...    67   2e-09
gb|AFK48535.1| unknown [Medicago truncatula]                           67   2e-09
ref|XP_003627922.1| Ribosome-recycling factor [Medicago truncatu...    67   2e-09
gb|ACJ83493.1| unknown [Medicago truncatula]                           67   2e-09
ref|XP_002298606.1| hypothetical protein POPTR_0001s34130g [Popu...    67   2e-09
gb|ESW05716.1| hypothetical protein PHAVU_011G203500g [Phaseolus...    67   3e-09
ref|XP_006447119.1| hypothetical protein CICLE_v10016267mg [Citr...    67   3e-09
gb|EMT24181.1| Ribosome-recycling factor [Aegilops tauschii]           67   3e-09

>gb|ABK24606.1| unknown [Picea sitchensis]
          Length = 269

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 36/42 (85%), Positives = 39/42 (92%)
 Frame = -3

Query: 381 KAGSSISEDDAKRLEKEIDDLTKKFIKTAEDMCKAKEKEIRG 256
           KA SS+S+DD KRLEKEIDDLTKKF+KTAEDMCKAKEKEI G
Sbjct: 227 KAVSSMSKDDVKRLEKEIDDLTKKFVKTAEDMCKAKEKEIMG 268


>ref|XP_006360499.1| PREDICTED: ribosome-recycling factor, chloroplastic-like [Solanum
           tuberosum]
          Length = 280

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 34/42 (80%), Positives = 40/42 (95%)
 Frame = -3

Query: 387 KDKAGSSISEDDAKRLEKEIDDLTKKFIKTAEDMCKAKEKEI 262
           KDK+ S+ S+DDAKRLEKEIDDLTKKFIK+AEDMCK+K+KEI
Sbjct: 236 KDKSASAFSDDDAKRLEKEIDDLTKKFIKSAEDMCKSKDKEI 277


>ref|XP_004250014.1| PREDICTED: ribosome-recycling factor-like [Solanum lycopersicum]
          Length = 277

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 34/42 (80%), Positives = 40/42 (95%)
 Frame = -3

Query: 387 KDKAGSSISEDDAKRLEKEIDDLTKKFIKTAEDMCKAKEKEI 262
           KDK+ S+ SEDDAKRLEKEIDDLTKKFIK+AEDMCK+K++EI
Sbjct: 233 KDKSASAFSEDDAKRLEKEIDDLTKKFIKSAEDMCKSKDREI 274


>gb|ABR18224.1| unknown [Picea sitchensis]
          Length = 269

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 35/42 (83%), Positives = 38/42 (90%)
 Frame = -3

Query: 381 KAGSSISEDDAKRLEKEIDDLTKKFIKTAEDMCKAKEKEIRG 256
           KA SS+S+DD KRLEKEIDDLTKKF+KTAEDMCK KEKEI G
Sbjct: 227 KAVSSMSKDDVKRLEKEIDDLTKKFVKTAEDMCKTKEKEIMG 268


>ref|XP_002509550.1| ribosome recycling factor, putative [Ricinus communis]
           gi|223549449|gb|EEF50937.1| ribosome recycling factor,
           putative [Ricinus communis]
          Length = 262

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 32/43 (74%), Positives = 40/43 (93%)
 Frame = -3

Query: 381 KAGSSISEDDAKRLEKEIDDLTKKFIKTAEDMCKAKEKEIRGG 253
           KAGS++S+DD KRLEKE+D+LTKKF+K+AED+CKAKEKEI  G
Sbjct: 220 KAGSNLSKDDVKRLEKEVDELTKKFVKSAEDICKAKEKEITVG 262


>ref|XP_002263449.1| PREDICTED: ribosome-recycling factor [Vitis vinifera]
           gi|296090242|emb|CBI40061.3| unnamed protein product
           [Vitis vinifera]
          Length = 258

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 33/43 (76%), Positives = 39/43 (90%)
 Frame = -3

Query: 381 KAGSSISEDDAKRLEKEIDDLTKKFIKTAEDMCKAKEKEIRGG 253
           KAGSS+ +D AKRLEKE+D+LTKKF+K+AEDMCKAKEKEI  G
Sbjct: 216 KAGSSLPKDVAKRLEKEVDELTKKFVKSAEDMCKAKEKEIAEG 258


>emb|CAN68423.1| hypothetical protein VITISV_018268 [Vitis vinifera]
          Length = 258

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 33/43 (76%), Positives = 39/43 (90%)
 Frame = -3

Query: 381 KAGSSISEDDAKRLEKEIDDLTKKFIKTAEDMCKAKEKEIRGG 253
           KAGSS+ +D AKRLEKE+D+LTKKF+K+AEDMCKAKEKEI  G
Sbjct: 216 KAGSSLPKDVAKRLEKEVDELTKKFVKSAEDMCKAKEKEIAEG 258


>ref|XP_006857385.1| hypothetical protein AMTR_s00067p00134010 [Amborella trichopoda]
           gi|548861478|gb|ERN18852.1| hypothetical protein
           AMTR_s00067p00134010 [Amborella trichopoda]
          Length = 203

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 31/42 (73%), Positives = 38/42 (90%)
 Frame = -3

Query: 381 KAGSSISEDDAKRLEKEIDDLTKKFIKTAEDMCKAKEKEIRG 256
           KA S IS+DDAK+LEKE+DD+TKKF+K+A+DMCK KEKEI G
Sbjct: 161 KAASCISKDDAKKLEKEVDDMTKKFVKSADDMCKEKEKEITG 202


>dbj|BAD44436.1| putative ribosome recycling factor [Arabidopsis thaliana]
          Length = 267

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 30/40 (75%), Positives = 38/40 (95%)
 Frame = -3

Query: 381 KAGSSISEDDAKRLEKEIDDLTKKFIKTAEDMCKAKEKEI 262
           KAGSS+ +D+ KRLEKE+D+LTKKF+K+AEDMCK+KEKEI
Sbjct: 225 KAGSSLPKDEVKRLEKEVDELTKKFVKSAEDMCKSKEKEI 264


>ref|NP_186829.3| ribosome recycling factor [Arabidopsis thaliana]
           gi|34146850|gb|AAQ62433.1| At3g01800 [Arabidopsis
           thaliana] gi|51970776|dbj|BAD44080.1| putative ribosome
           recycling factor [Arabidopsis thaliana]
           gi|62319213|dbj|BAD94407.1| putative ribosome recycling
           factor [Arabidopsis thaliana]
           gi|332640195|gb|AEE73716.1| ribosome recycling factor
           [Arabidopsis thaliana]
          Length = 267

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 30/40 (75%), Positives = 38/40 (95%)
 Frame = -3

Query: 381 KAGSSISEDDAKRLEKEIDDLTKKFIKTAEDMCKAKEKEI 262
           KAGSS+ +D+ KRLEKE+D+LTKKF+K+AEDMCK+KEKEI
Sbjct: 225 KAGSSLPKDEVKRLEKEVDELTKKFVKSAEDMCKSKEKEI 264


>ref|XP_002884259.1| hypothetical protein ARALYDRAFT_317013 [Arabidopsis lyrata subsp.
           lyrata] gi|297330099|gb|EFH60518.1| hypothetical protein
           ARALYDRAFT_317013 [Arabidopsis lyrata subsp. lyrata]
          Length = 238

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 30/40 (75%), Positives = 38/40 (95%)
 Frame = -3

Query: 381 KAGSSISEDDAKRLEKEIDDLTKKFIKTAEDMCKAKEKEI 262
           KAGSS+ +D+ KRLEKE+D+LTKKF+K+AEDMCK+KEKEI
Sbjct: 196 KAGSSLPKDEVKRLEKEVDELTKKFVKSAEDMCKSKEKEI 235


>gb|AAF03454.1|AC010797_30 putative ribosome recycling factor [Arabidopsis thaliana]
          Length = 284

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 30/40 (75%), Positives = 38/40 (95%)
 Frame = -3

Query: 381 KAGSSISEDDAKRLEKEIDDLTKKFIKTAEDMCKAKEKEI 262
           KAGSS+ +D+ KRLEKE+D+LTKKF+K+AEDMCK+KEKEI
Sbjct: 242 KAGSSLPKDEVKRLEKEVDELTKKFVKSAEDMCKSKEKEI 281


>ref|XP_004976031.1| PREDICTED: ribosome-recycling factor, chloroplastic-like [Setaria
           italica]
          Length = 259

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 31/42 (73%), Positives = 38/42 (90%)
 Frame = -3

Query: 381 KAGSSISEDDAKRLEKEIDDLTKKFIKTAEDMCKAKEKEIRG 256
           K+ SS+ +DD KRLEKEI++LTKKFIK+A+DMCKAKEKEI G
Sbjct: 217 KSASSMPKDDVKRLEKEIEELTKKFIKSADDMCKAKEKEISG 258


>gb|AFK48535.1| unknown [Medicago truncatula]
          Length = 263

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 32/43 (74%), Positives = 36/43 (83%)
 Frame = -3

Query: 381 KAGSSISEDDAKRLEKEIDDLTKKFIKTAEDMCKAKEKEIRGG 253
           K  S + +DD KRLEKE+DDLTKKFIKTAED+CKAKEKEI  G
Sbjct: 221 KLNSILPKDDLKRLEKEVDDLTKKFIKTAEDVCKAKEKEISQG 263


>ref|XP_003627922.1| Ribosome-recycling factor [Medicago truncatula]
           gi|355521944|gb|AET02398.1| Ribosome-recycling factor
           [Medicago truncatula]
          Length = 262

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 32/43 (74%), Positives = 36/43 (83%)
 Frame = -3

Query: 381 KAGSSISEDDAKRLEKEIDDLTKKFIKTAEDMCKAKEKEIRGG 253
           K  S + +DD KRLEKE+DDLTKKFIKTAED+CKAKEKEI  G
Sbjct: 220 KLNSILPKDDLKRLEKEVDDLTKKFIKTAEDVCKAKEKEISQG 262


>gb|ACJ83493.1| unknown [Medicago truncatula]
          Length = 48

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 32/43 (74%), Positives = 36/43 (83%)
 Frame = -3

Query: 381 KAGSSISEDDAKRLEKEIDDLTKKFIKTAEDMCKAKEKEIRGG 253
           K  S + +DD KRLEKE+DDLTKKFIKTAED+CKAKEKEI  G
Sbjct: 6   KLNSILPKDDLKRLEKEVDDLTKKFIKTAEDVCKAKEKEISQG 48


>ref|XP_002298606.1| hypothetical protein POPTR_0001s34130g [Populus trichocarpa]
           gi|222845864|gb|EEE83411.1| hypothetical protein
           POPTR_0001s34130g [Populus trichocarpa]
          Length = 273

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 30/43 (69%), Positives = 38/43 (88%)
 Frame = -3

Query: 381 KAGSSISEDDAKRLEKEIDDLTKKFIKTAEDMCKAKEKEIRGG 253
           KAGSS  +DDAK+LEKEI+++TKKF+K+AEDMC  KEKEI+ G
Sbjct: 231 KAGSSFPKDDAKKLEKEIEEMTKKFVKSAEDMCNNKEKEIKTG 273


>gb|ESW05716.1| hypothetical protein PHAVU_011G203500g [Phaseolus vulgaris]
          Length = 261

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 31/43 (72%), Positives = 36/43 (83%)
 Frame = -3

Query: 381 KAGSSISEDDAKRLEKEIDDLTKKFIKTAEDMCKAKEKEIRGG 253
           K  S + +DD KRLEKE+DDLTKKFIKTAED+CKAKEKE+  G
Sbjct: 219 KLYSGLPKDDIKRLEKEVDDLTKKFIKTAEDVCKAKEKEVTQG 261


>ref|XP_006447119.1| hypothetical protein CICLE_v10016267mg [Citrus clementina]
           gi|568831536|ref|XP_006470018.1| PREDICTED:
           ribosome-recycling factor, chloroplastic-like [Citrus
           sinensis] gi|557549730|gb|ESR60359.1| hypothetical
           protein CICLE_v10016267mg [Citrus clementina]
          Length = 268

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 30/43 (69%), Positives = 38/43 (88%)
 Frame = -3

Query: 381 KAGSSISEDDAKRLEKEIDDLTKKFIKTAEDMCKAKEKEIRGG 253
           KAGSS+ +D  KRLEKEID+LTKK++K+A+D+CKAKEKEI  G
Sbjct: 226 KAGSSLPKDQMKRLEKEIDELTKKYVKSADDICKAKEKEINEG 268


>gb|EMT24181.1| Ribosome-recycling factor [Aegilops tauschii]
          Length = 260

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 30/42 (71%), Positives = 38/42 (90%)
 Frame = -3

Query: 381 KAGSSISEDDAKRLEKEIDDLTKKFIKTAEDMCKAKEKEIRG 256
           K+ SS+ +DD KRLEKE+++LTKKFIK+A+DMCKAKEKEI G
Sbjct: 218 KSSSSMPKDDIKRLEKEVEELTKKFIKSADDMCKAKEKEISG 259


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