BLASTX nr result
ID: Rehmannia23_contig00020182
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00020182
(1464 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001275069.1| RRM-containing RNA-binding protein-like prot... 59 2e-09
ref|XP_006358035.1| PREDICTED: zinc finger CCCH domain-containin... 59 2e-09
gb|ABB72821.1| RRM-containing RNA-binding protein-like protein [... 59 2e-09
ref|XP_004249203.1| PREDICTED: zinc finger CCCH domain-containin... 59 4e-09
gb|AEZ00895.1| putative zinc finger CCCH-type family protein, pa... 59 5e-09
ref|XP_006351235.1| PREDICTED: zinc finger CCCH domain-containin... 57 6e-09
gb|EPS61930.1| hypothetical protein M569_12863, partial [Genlise... 59 6e-09
gb|EOX91717.1| CCCH-type zinc fingerfamily protein with RNA-bind... 59 8e-09
ref|XP_002280897.1| PREDICTED: zinc finger CCCH domain-containin... 58 8e-09
emb|CBI16011.3| unnamed protein product [Vitis vinifera] 58 8e-09
ref|XP_003601302.1| Zinc finger CCCH domain-containing protein [... 59 1e-08
ref|XP_004308634.1| PREDICTED: zinc finger CCCH domain-containin... 58 1e-08
ref|XP_001766505.1| predicted protein [Physcomitrella patens] gi... 59 1e-08
ref|XP_004501986.1| PREDICTED: zinc finger CCCH domain-containin... 58 2e-08
ref|XP_004501985.1| PREDICTED: zinc finger CCCH domain-containin... 58 2e-08
ref|XP_002314129.1| zinc finger family protein [Populus trichoca... 57 4e-08
ref|XP_002314127.1| hypothetical protein POPTR_0009s04630g [Popu... 57 4e-08
ref|XP_004296718.1| PREDICTED: zinc finger CCCH domain-containin... 58 4e-08
ref|XP_006847071.1| hypothetical protein AMTR_s00017p00207950 [A... 58 4e-08
ref|XP_006379036.1| hypothetical protein POPTR_0009s04610g [Popu... 57 4e-08
>ref|NP_001275069.1| RRM-containing RNA-binding protein-like protein [Solanum tuberosum]
gi|83283985|gb|ABC01900.1| RRM-containing RNA-binding
protein-like protein [Solanum tuberosum]
Length = 487
Score = 58.5 bits (140), Expect(2) = 2e-09
Identities = 24/29 (82%), Positives = 25/29 (86%)
Frame = +2
Query: 1376 HICSFYGWGQCTRGLECPYRHEMPVEGEL 1462
H+CSFY GQCTRGLECPYRHEMP GEL
Sbjct: 161 HVCSFYIRGQCTRGLECPYRHEMPETGEL 189
Score = 31.6 bits (70), Expect(2) = 2e-09
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +3
Query: 1326 KVRANDTILTLQKTTP 1373
KVRANDTIL LQ+TTP
Sbjct: 138 KVRANDTILKLQRTTP 153
>ref|XP_006358035.1| PREDICTED: zinc finger CCCH domain-containing protein 49 [Solanum
tuberosum]
Length = 481
Score = 58.5 bits (140), Expect(2) = 2e-09
Identities = 24/29 (82%), Positives = 25/29 (86%)
Frame = +2
Query: 1376 HICSFYGWGQCTRGLECPYRHEMPVEGEL 1462
H+CSFY GQCTRGLECPYRHEMP GEL
Sbjct: 161 HVCSFYIRGQCTRGLECPYRHEMPETGEL 189
Score = 31.6 bits (70), Expect(2) = 2e-09
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +3
Query: 1326 KVRANDTILTLQKTTP 1373
KVRANDTIL LQ+TTP
Sbjct: 138 KVRANDTILKLQRTTP 153
>gb|ABB72821.1| RRM-containing RNA-binding protein-like protein [Solanum tuberosum]
Length = 462
Score = 58.5 bits (140), Expect(2) = 2e-09
Identities = 24/29 (82%), Positives = 25/29 (86%)
Frame = +2
Query: 1376 HICSFYGWGQCTRGLECPYRHEMPVEGEL 1462
H+CSFY GQCTRGLECPYRHEMP GEL
Sbjct: 161 HVCSFYIRGQCTRGLECPYRHEMPETGEL 189
Score = 31.6 bits (70), Expect(2) = 2e-09
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +3
Query: 1326 KVRANDTILTLQKTTP 1373
KVRANDTIL LQ+TTP
Sbjct: 138 KVRANDTILKLQRTTP 153
>ref|XP_004249203.1| PREDICTED: zinc finger CCCH domain-containing protein 49-like
[Solanum lycopersicum] gi|133711805|gb|ABO36623.1|
putative RNA-binding protein [Solanum lycopersicum]
Length = 479
Score = 58.5 bits (140), Expect(2) = 4e-09
Identities = 24/29 (82%), Positives = 25/29 (86%)
Frame = +2
Query: 1376 HICSFYGWGQCTRGLECPYRHEMPVEGEL 1462
H+CSFY GQCTRGLECPYRHEMP GEL
Sbjct: 161 HVCSFYIRGQCTRGLECPYRHEMPETGEL 189
Score = 30.8 bits (68), Expect(2) = 4e-09
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3
Query: 1326 KVRANDTILTLQKTTP 1373
KVRANDTI+ LQ+TTP
Sbjct: 138 KVRANDTIMKLQRTTP 153
>gb|AEZ00895.1| putative zinc finger CCCH-type family protein, partial [Elaeis
guineensis]
Length = 307
Score = 59.3 bits (142), Expect(2) = 5e-09
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = +2
Query: 1376 HICSFYGWGQCTRGLECPYRHEMPVEGEL 1462
H+CSFY G+CTRG ECPYRHEMPV GEL
Sbjct: 161 HVCSFYARGECTRGAECPYRHEMPVTGEL 189
Score = 29.6 bits (65), Expect(2) = 5e-09
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +3
Query: 1326 KVRANDTILTLQKTTP 1373
KVR NDTIL LQ+TTP
Sbjct: 138 KVRPNDTILKLQRTTP 153
>ref|XP_006351235.1| PREDICTED: zinc finger CCCH domain-containing protein 49-like
[Solanum tuberosum]
Length = 479
Score = 57.0 bits (136), Expect(2) = 6e-09
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = +2
Query: 1376 HICSFYGWGQCTRGLECPYRHEMPVEGEL 1462
H+CSF+ GQCTRGLECPYRHEMP GEL
Sbjct: 161 HVCSFFIRGQCTRGLECPYRHEMPETGEL 189
Score = 31.6 bits (70), Expect(2) = 6e-09
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +3
Query: 1326 KVRANDTILTLQKTTP 1373
KVRANDTIL LQ+TTP
Sbjct: 138 KVRANDTILKLQRTTP 153
>gb|EPS61930.1| hypothetical protein M569_12863, partial [Genlisea aurea]
Length = 390
Score = 58.9 bits (141), Expect(2) = 6e-09
Identities = 24/29 (82%), Positives = 25/29 (86%)
Frame = +2
Query: 1376 HICSFYGWGQCTRGLECPYRHEMPVEGEL 1462
H+CSFY GQCTRG ECPYRHEMP EGEL
Sbjct: 163 HVCSFYIRGQCTRGTECPYRHEMPEEGEL 191
Score = 29.6 bits (65), Expect(2) = 6e-09
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +3
Query: 1326 KVRANDTILTLQKTTP 1373
KVR NDTIL LQ+TTP
Sbjct: 140 KVRPNDTILKLQRTTP 155
>gb|EOX91717.1| CCCH-type zinc fingerfamily protein with RNA-binding domain
[Theobroma cacao]
Length = 495
Score = 58.5 bits (140), Expect(2) = 8e-09
Identities = 24/29 (82%), Positives = 25/29 (86%)
Frame = +2
Query: 1376 HICSFYGWGQCTRGLECPYRHEMPVEGEL 1462
HICSFY G+CTRG ECPYRHEMPV GEL
Sbjct: 161 HICSFYVRGECTRGAECPYRHEMPVTGEL 189
Score = 29.6 bits (65), Expect(2) = 8e-09
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +3
Query: 1326 KVRANDTILTLQKTTP 1373
KVR NDTIL LQ+TTP
Sbjct: 138 KVRPNDTILKLQRTTP 153
>ref|XP_002280897.1| PREDICTED: zinc finger CCCH domain-containing protein 49-like [Vitis
vinifera]
Length = 474
Score = 57.8 bits (138), Expect(2) = 8e-09
Identities = 22/29 (75%), Positives = 25/29 (86%)
Frame = +2
Query: 1376 HICSFYGWGQCTRGLECPYRHEMPVEGEL 1462
H+CSFY G+CTRG ECPYRHEMP+ GEL
Sbjct: 161 HVCSFYVRGECTRGAECPYRHEMPITGEL 189
Score = 30.4 bits (67), Expect(2) = 8e-09
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +3
Query: 1320 FIKVRANDTILTLQKTTP 1373
F KVR NDTIL LQ+TTP
Sbjct: 136 FGKVRPNDTILKLQRTTP 153
>emb|CBI16011.3| unnamed protein product [Vitis vinifera]
Length = 349
Score = 57.8 bits (138), Expect(2) = 8e-09
Identities = 22/29 (75%), Positives = 25/29 (86%)
Frame = +2
Query: 1376 HICSFYGWGQCTRGLECPYRHEMPVEGEL 1462
H+CSFY G+CTRG ECPYRHEMP+ GEL
Sbjct: 161 HVCSFYVRGECTRGAECPYRHEMPITGEL 189
Score = 30.4 bits (67), Expect(2) = 8e-09
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +3
Query: 1320 FIKVRANDTILTLQKTTP 1373
F KVR NDTIL LQ+TTP
Sbjct: 136 FGKVRPNDTILKLQRTTP 153
>ref|XP_003601302.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355490350|gb|AES71553.1| Zinc finger CCCH
domain-containing protein [Medicago truncatula]
Length = 492
Score = 58.9 bits (141), Expect(2) = 1e-08
Identities = 24/29 (82%), Positives = 25/29 (86%)
Frame = +2
Query: 1376 HICSFYGWGQCTRGLECPYRHEMPVEGEL 1462
HICSFY G+CTRG ECPYRHEMPV GEL
Sbjct: 161 HICSFYTRGECTRGAECPYRHEMPVTGEL 189
Score = 28.9 bits (63), Expect(2) = 1e-08
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +3
Query: 1320 FIKVRANDTILTLQKTTP 1373
F K R NDTIL LQ+TTP
Sbjct: 136 FGKARPNDTILKLQRTTP 153
>ref|XP_004308634.1| PREDICTED: zinc finger CCCH domain-containing protein 49-like
[Fragaria vesca subsp. vesca]
Length = 368
Score = 57.8 bits (138), Expect(2) = 1e-08
Identities = 22/29 (75%), Positives = 25/29 (86%)
Frame = +2
Query: 1376 HICSFYGWGQCTRGLECPYRHEMPVEGEL 1462
H+CSFY GQCTRG ECP+RHEMP+ GEL
Sbjct: 166 HVCSFYTRGQCTRGTECPFRHEMPITGEL 194
Score = 30.0 bits (66), Expect(2) = 1e-08
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +3
Query: 1326 KVRANDTILTLQKTTP 1373
KVR NDTIL LQ+TTP
Sbjct: 143 KVRTNDTILKLQRTTP 158
>ref|XP_001766505.1| predicted protein [Physcomitrella patens] gi|162682414|gb|EDQ68833.1|
predicted protein [Physcomitrella patens]
Length = 474
Score = 58.5 bits (140), Expect(2) = 1e-08
Identities = 24/29 (82%), Positives = 25/29 (86%)
Frame = +2
Query: 1376 HICSFYGWGQCTRGLECPYRHEMPVEGEL 1462
HICSFY G+CTRG ECPYRHEMPV GEL
Sbjct: 161 HICSFYVRGECTRGAECPYRHEMPVTGEL 189
Score = 28.9 bits (63), Expect(2) = 1e-08
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +3
Query: 1320 FIKVRANDTILTLQKTTP 1373
F K R NDTIL LQ+TTP
Sbjct: 136 FGKARPNDTILKLQRTTP 153
>ref|XP_004501986.1| PREDICTED: zinc finger CCCH domain-containing protein 49-like isoform
X2 [Cicer arietinum]
Length = 485
Score = 58.2 bits (139), Expect(2) = 2e-08
Identities = 24/29 (82%), Positives = 25/29 (86%)
Frame = +2
Query: 1376 HICSFYGWGQCTRGLECPYRHEMPVEGEL 1462
HICSFY G+CTRG ECPYRHEMPV GEL
Sbjct: 161 HICSFYIRGECTRGAECPYRHEMPVTGEL 189
Score = 28.9 bits (63), Expect(2) = 2e-08
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +3
Query: 1320 FIKVRANDTILTLQKTTP 1373
F K R NDTIL LQ+TTP
Sbjct: 136 FGKARPNDTILKLQRTTP 153
>ref|XP_004501985.1| PREDICTED: zinc finger CCCH domain-containing protein 49-like isoform
X1 [Cicer arietinum]
Length = 484
Score = 58.2 bits (139), Expect(2) = 2e-08
Identities = 24/29 (82%), Positives = 25/29 (86%)
Frame = +2
Query: 1376 HICSFYGWGQCTRGLECPYRHEMPVEGEL 1462
HICSFY G+CTRG ECPYRHEMPV GEL
Sbjct: 161 HICSFYIRGECTRGAECPYRHEMPVTGEL 189
Score = 28.9 bits (63), Expect(2) = 2e-08
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +3
Query: 1320 FIKVRANDTILTLQKTTP 1373
F K R NDTIL LQ+TTP
Sbjct: 136 FGKARPNDTILKLQRTTP 153
>ref|XP_002314129.1| zinc finger family protein [Populus trichocarpa]
gi|222850537|gb|EEE88084.1| zinc finger family protein
[Populus trichocarpa]
Length = 531
Score = 57.4 bits (137), Expect(2) = 4e-08
Identities = 21/29 (72%), Positives = 25/29 (86%)
Frame = +2
Query: 1376 HICSFYGWGQCTRGLECPYRHEMPVEGEL 1462
H+CSF+ G+CTRG ECPYRHEMP+ GEL
Sbjct: 161 HVCSFFARGECTRGAECPYRHEMPITGEL 189
Score = 28.5 bits (62), Expect(2) = 4e-08
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +3
Query: 1326 KVRANDTILTLQKTTP 1373
K +ANDTIL LQ+TTP
Sbjct: 138 KAQANDTILKLQRTTP 153
>ref|XP_002314127.1| hypothetical protein POPTR_0009s04630g [Populus trichocarpa]
gi|222850535|gb|EEE88082.1| hypothetical protein
POPTR_0009s04630g [Populus trichocarpa]
Length = 531
Score = 57.4 bits (137), Expect(2) = 4e-08
Identities = 21/29 (72%), Positives = 25/29 (86%)
Frame = +2
Query: 1376 HICSFYGWGQCTRGLECPYRHEMPVEGEL 1462
H+CSF+ G+CTRG ECPYRHEMP+ GEL
Sbjct: 161 HVCSFFARGECTRGAECPYRHEMPITGEL 189
Score = 28.5 bits (62), Expect(2) = 4e-08
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +3
Query: 1326 KVRANDTILTLQKTTP 1373
K +ANDTIL LQ+TTP
Sbjct: 138 KAQANDTILKLQRTTP 153
>ref|XP_004296718.1| PREDICTED: zinc finger CCCH domain-containing protein 40-like
[Fragaria vesca subsp. vesca]
Length = 497
Score = 57.8 bits (138), Expect(2) = 4e-08
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = +2
Query: 1376 HICSFYGWGQCTRGLECPYRHEMPVEGEL 1462
H+CSFY G+CTRG ECPYRHEMPV GEL
Sbjct: 161 HVCSFYIRGECTRGAECPYRHEMPVTGEL 189
Score = 28.1 bits (61), Expect(2) = 4e-08
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +3
Query: 1326 KVRANDTILTLQKTTP 1373
K R NDTIL LQ+TTP
Sbjct: 138 KARPNDTILKLQRTTP 153
>ref|XP_006847071.1| hypothetical protein AMTR_s00017p00207950 [Amborella trichopoda]
gi|548850100|gb|ERN08652.1| hypothetical protein
AMTR_s00017p00207950 [Amborella trichopoda]
Length = 472
Score = 57.8 bits (138), Expect(2) = 4e-08
Identities = 22/29 (75%), Positives = 25/29 (86%)
Frame = +2
Query: 1376 HICSFYGWGQCTRGLECPYRHEMPVEGEL 1462
H+CSFY G+CTRG ECPYRHEMP+ GEL
Sbjct: 160 HVCSFYVRGECTRGAECPYRHEMPITGEL 188
Score = 28.1 bits (61), Expect(2) = 4e-08
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +3
Query: 1326 KVRANDTILTLQKTTP 1373
K R NDTIL LQ+TTP
Sbjct: 137 KARPNDTILKLQRTTP 152
>ref|XP_006379036.1| hypothetical protein POPTR_0009s04610g [Populus trichocarpa]
gi|550331029|gb|ERP56833.1| hypothetical protein
POPTR_0009s04610g [Populus trichocarpa]
Length = 408
Score = 57.4 bits (137), Expect(2) = 4e-08
Identities = 21/29 (72%), Positives = 25/29 (86%)
Frame = +2
Query: 1376 HICSFYGWGQCTRGLECPYRHEMPVEGEL 1462
H+CSF+ G+CTRG ECPYRHEMP+ GEL
Sbjct: 38 HVCSFFARGECTRGAECPYRHEMPITGEL 66
Score = 28.5 bits (62), Expect(2) = 4e-08
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +3
Query: 1326 KVRANDTILTLQKTTP 1373
K +ANDTIL LQ+TTP
Sbjct: 15 KAQANDTILKLQRTTP 30