BLASTX nr result
ID: Rehmannia23_contig00020157
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00020157
(540 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004231193.1| PREDICTED: pentatricopeptide repeat-containi... 120 3e-25
ref|XP_006339632.1| PREDICTED: pentatricopeptide repeat-containi... 118 8e-25
gb|EXB51620.1| hypothetical protein L484_012912 [Morus notabilis] 100 2e-19
ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containi... 97 3e-18
gb|EOX95861.1| Pentatricopeptide repeat superfamily protein, put... 93 5e-17
gb|AGZ20103.1| pentatricopeptide repeat-containing protein [Came... 90 4e-16
ref|XP_006491189.1| PREDICTED: pentatricopeptide repeat-containi... 86 6e-15
ref|XP_006444948.1| hypothetical protein CICLE_v100190672mg, par... 86 6e-15
ref|XP_002511922.1| pentatricopeptide repeat-containing protein,... 80 3e-13
ref|XP_006397795.1| hypothetical protein EUTSA_v10001319mg [Eutr... 76 4e-12
ref|XP_002320827.2| pentatricopeptide repeat-containing family p... 74 2e-11
gb|AAM61467.1| unknown [Arabidopsis thaliana] 69 9e-10
ref|NP_198189.1| pentatricopeptide repeat-containing protein [Ar... 68 1e-09
ref|NP_680234.1| pentatricopeptide repeat-containing protein [Ar... 68 1e-09
ref|NP_191711.1| pentatricopeptide repeat-containing protein [Ar... 68 1e-09
ref|XP_006409459.1| hypothetical protein EUTSA_v10022571mg [Eutr... 67 3e-09
ref|XP_004300812.1| PREDICTED: pentatricopeptide repeat-containi... 64 2e-08
ref|XP_002878387.1| pentatricopeptide repeat-containing protein ... 64 2e-08
ref|XP_004301483.1| PREDICTED: pentatricopeptide repeat-containi... 62 1e-07
ref|XP_006292416.1| hypothetical protein CARUB_v10018630mg [Caps... 60 3e-07
>ref|XP_004231193.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Solanum lycopersicum]
Length = 761
Score = 120 bits (300), Expect = 3e-25
Identities = 74/171 (43%), Positives = 99/171 (57%), Gaps = 12/171 (7%)
Frame = -1
Query: 477 PRAASAATLRHFSAD------PQPSPDLSTPVSQTLSLLQITDPSSWPTNXXXXXXXXXX 316
P+ S + LR FS + P P P +S V + +SLL+ TD + W +N
Sbjct: 17 PKTGSISGLRCFSGEIDDTQKPLPQPPISFAVPEIVSLLKTTDHNDWISNSELVEYLHTP 76
Query: 315 XXXXXL-KITRQLPNCQNALQFFNHLKTNSHLSDSAP----LAFQAVLELAMRENP-DCP 154
L KITRQL + + ALQFF KT+S S S P FQA+LE AMRE D P
Sbjct: 77 PSPTSLLKITRQLGSTEKALQFFEFFKTHSSSSSSNPSSLSFTFQAILEQAMREEKSDVP 136
Query: 153 GKLYELFVSSKDQNTPLSVNAGTLLIKCFSRAKMLDEMIMVFDAIDDEVKN 1
KL++LF +KD+ PLS+NAGTLL++CF RAKML+E I V+ +D + +N
Sbjct: 137 RKLFQLFSFAKDRKIPLSINAGTLLMRCFGRAKMLEESISVYHELDSDSRN 187
>ref|XP_006339632.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Solanum tuberosum]
Length = 761
Score = 118 bits (296), Expect = 8e-25
Identities = 72/171 (42%), Positives = 97/171 (56%), Gaps = 12/171 (7%)
Frame = -1
Query: 477 PRAASAATLRHFSAD------PQPSPDLSTPVSQTLSLLQITDPSSWPTNXXXXXXXXXX 316
P+ S + LRHFS + P P P S V + +SLL+ D + W +N
Sbjct: 17 PKTGSISGLRHFSGEIDDTQKPLPPPPTSFAVPEIVSLLKTNDHNDWISNSQLVEFLHTP 76
Query: 315 XXXXXL-KITRQLPNCQNALQFFNHLKTNSHLSDSAP----LAFQAVLELAMRENP-DCP 154
L KITRQL + + AL FF KT+S S S P FQA+LE AM E D P
Sbjct: 77 PSPTSLLKITRQLGSTEKALHFFEFFKTHSSSSSSNPSSLSFTFQAILEQAMHEEKSDVP 136
Query: 153 GKLYELFVSSKDQNTPLSVNAGTLLIKCFSRAKMLDEMIMVFDAIDDEVKN 1
GKL++LF +KD+ PLS+NA TLL++CF RAKML+E I V++ +D + +N
Sbjct: 137 GKLFQLFSFAKDRKIPLSINAATLLMRCFGRAKMLEESISVYNELDSDSRN 187
>gb|EXB51620.1| hypothetical protein L484_012912 [Morus notabilis]
Length = 769
Score = 100 bits (249), Expect = 2e-19
Identities = 63/157 (40%), Positives = 88/157 (56%), Gaps = 6/157 (3%)
Frame = -1
Query: 453 LRHFSADPQPSPDLSTPVSQTLSLLQITDPSSWPTNXXXXXXXXXXXXXXXLK---ITRQ 283
LRH S + P D T +S L LLQ + + W + I R+
Sbjct: 31 LRHLSVESYPPKDDETFISHALQLLQPPE-TEWNAEQLQTLLFSDSESPSPTRLLHIARR 89
Query: 282 LPNCQNALQFFNHLKTNSHL-SDSAPLA--FQAVLELAMRENPDCPGKLYELFVSSKDQN 112
L + AL FF+H++ NSHL DS+ LA FQAVLELA RE P +L+EL+ +S+++N
Sbjct: 90 LDSSSKALNFFDHVRENSHLPKDSSLLASTFQAVLELASRE-PSWEKRLFELYTTSRERN 148
Query: 111 TPLSVNAGTLLIKCFSRAKMLDEMIMVFDAIDDEVKN 1
PL++NA TLL CF RA M +E++ V +DD+ KN
Sbjct: 149 VPLTINAATLLFVCFGRAGMREELMTVLKGLDDDCKN 185
>ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product
[Vitis vinifera]
Length = 765
Score = 96.7 bits (239), Expect = 3e-18
Identities = 68/179 (37%), Positives = 95/179 (53%), Gaps = 13/179 (7%)
Frame = -1
Query: 516 QPSMRRLIKPFKPPRAASAATLRHFSADPQ-------PSPDLSTPVSQTLSLLQITDPSS 358
Q + R ++P PP +S LRH SA+P P D S+ V+ + LLQ TD +
Sbjct: 11 QSKLLRFLRPQTPPNLSSL--LRHLSAEPDHHPPAPPPQNDSSSVVNLVVELLQTTD-ND 67
Query: 357 WPTNXXXXXXXXXXXXXXXL----KITRQLPNCQNALQFFNHLKTNSHLSDSAPLAF--Q 196
W + +ITR L + AL+FFN ++ NS DS L+F +
Sbjct: 68 WNEDKLHQLLFPTTSPPPPPHNLLQITRLLGSTAKALKFFNWVQANSPCQDSPLLSFTLE 127
Query: 195 AVLELAMRENPDCPGKLYELFVSSKDQNTPLSVNAGTLLIKCFSRAKMLDEMIMVFDAI 19
AV E A RE P+ KL +LF +SK PLSVNA TLLI+CF RA+M+DE +V++ +
Sbjct: 128 AVFEHASRE-PNSHNKLLDLFKTSKSHKIPLSVNAATLLIRCFGRAQMVDESFLVYNEL 185
>gb|EOX95861.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
cacao]
Length = 764
Score = 92.8 bits (229), Expect = 5e-17
Identities = 65/178 (36%), Positives = 91/178 (51%), Gaps = 11/178 (6%)
Frame = -1
Query: 501 RLIKPFKPPRAASAATLRHFSADPQPSP------DLSTPVSQTLSLLQITDPSSWPTNXX 340
RL+KP PP S RH +P P P D + + Q + LL T W ++
Sbjct: 17 RLLKP--PP--TSYLLHRHLCTEPNPEPLPAPPQDEESKIIQAVQLLLETPHEEWSSSQP 72
Query: 339 XXXXXXXXXXXXXL---KITRQLPNCQNALQFFNHLKTNSHLSDSAPLA--FQAVLELAM 175
+ITR+LP+ AL FF HL+ NS D+ L+ FQAVLE A
Sbjct: 73 LQSLLFSSPPLSPRFLLQITRRLPSSSEALNFFKHLQQNSPSQDAQFLSYPFQAVLEQAG 132
Query: 174 RENPDCPGKLYELFVSSKDQNTPLSVNAGTLLIKCFSRAKMLDEMIMVFDAIDDEVKN 1
RE PD +L +L+ SK PL+VNA LLI+ F R +M+DE +++F+ +D +KN
Sbjct: 133 RE-PDSATRLSQLYQDSKQWEIPLTVNAAVLLIRYFGRLEMVDESLLIFNELDPTLKN 189
>gb|AGZ20103.1| pentatricopeptide repeat-containing protein [Camellia sinensis]
Length = 771
Score = 89.7 bits (221), Expect = 4e-16
Identities = 66/192 (34%), Positives = 95/192 (49%), Gaps = 16/192 (8%)
Frame = -1
Query: 528 SADPQPSMRRLIKPFKPPRAASAATLRHFSAD------PQPSPDLSTPV--SQTLSLLQI 373
SA Q ++ RL+KP S LRH S+ P+P P L + +Q L+LLQ
Sbjct: 7 SASKQSNLLRLVKPNSSTTLPSLL-LRHLSSSATDPPPPEPPPPLPNSILTTQILNLLQ- 64
Query: 372 TDPSSWPTNXXXXXXXXXXXXXXXL-----KITRQLPNCQNALQFFNHLKTNSHLS---D 217
T W N KITR L AL FF +T S
Sbjct: 65 THEIDWNNNNDELRQLLFSSTDSPHSFSLYKITRSLGTATKALNFFEFFRTQSPSPPDPS 124
Query: 216 SAPLAFQAVLELAMRENPDCPGKLYELFVSSKDQNTPLSVNAGTLLIKCFSRAKMLDEMI 37
S +FQA+ ELA ++ P+ P KL EL SKD N PL+ ++ TLLI+CF+RA ++++ +
Sbjct: 125 SLSSSFQAIFELASQQ-PNPPTKLSELLTISKDHNIPLNFSSATLLIRCFARAGLVEKSV 183
Query: 36 MVFDAIDDEVKN 1
++F +D ++KN
Sbjct: 184 LIFKELDPDLKN 195
>ref|XP_006491189.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g28460-like [Citrus sinensis]
Length = 757
Score = 85.9 bits (211), Expect = 6e-15
Identities = 55/161 (34%), Positives = 85/161 (52%), Gaps = 10/161 (6%)
Frame = -1
Query: 453 LRHFSADPQ-PSPDLSTP---VSQTLSLLQITDPSSW---PTNXXXXXXXXXXXXXXXLK 295
LRHF + P P +S ++Q L +L T + W P +
Sbjct: 21 LRHFCTEHNSPLPQVSESSIIITQALDVLLQTPDNEWTSSPQIKNLLFSSTSLSPQLFFQ 80
Query: 294 ITRQLPNCQNALQFFNHLKTNSHL---SDSAPLAFQAVLELAMRENPDCPGKLYELFVSS 124
ITR+ P+ AL FFN L++N + S A+QAV ELA+RE P L++L+ +
Sbjct: 81 ITRRFPSSSRALSFFNFLQSNLPTEANTSSLSYAYQAVFELAIRERMS-PESLFDLYKAC 139
Query: 123 KDQNTPLSVNAGTLLIKCFSRAKMLDEMIMVFDAIDDEVKN 1
KDQN PLS+N+ TLLI+ F + M D ++V++ +D+ ++N
Sbjct: 140 KDQNIPLSINSATLLIRFFGKVSMYDYSLLVYNELDNNLRN 180
>ref|XP_006444948.1| hypothetical protein CICLE_v100190672mg, partial [Citrus
clementina] gi|557547210|gb|ESR58188.1| hypothetical
protein CICLE_v100190672mg, partial [Citrus clementina]
Length = 260
Score = 85.9 bits (211), Expect = 6e-15
Identities = 55/161 (34%), Positives = 85/161 (52%), Gaps = 10/161 (6%)
Frame = -1
Query: 453 LRHFSADPQ-PSPDLSTP---VSQTLSLLQITDPSSW---PTNXXXXXXXXXXXXXXXLK 295
LRHF + P P +S ++Q L +L T + W P +
Sbjct: 21 LRHFCTEHNSPLPQVSESSIIITQALDVLLQTPDNEWTSSPQIKNLLFSSTSLSPQLFFQ 80
Query: 294 ITRQLPNCQNALQFFNHLKTNSHL---SDSAPLAFQAVLELAMRENPDCPGKLYELFVSS 124
ITR+ P+ AL FFN L++N + S A+QAV ELA+RE P L++L+ +
Sbjct: 81 ITRRFPSSSRALSFFNFLQSNLPTEANTSSLSYAYQAVFELAIRERMS-PESLFDLYKAC 139
Query: 123 KDQNTPLSVNAGTLLIKCFSRAKMLDEMIMVFDAIDDEVKN 1
KDQN PLS+N+ TLLI+ F + M D ++V++ +D+ ++N
Sbjct: 140 KDQNIPLSINSATLLIRFFGKVSMYDYSLLVYNELDNNLRN 180
>ref|XP_002511922.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223549102|gb|EEF50591.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 346
Score = 80.1 bits (196), Expect = 3e-13
Identities = 59/195 (30%), Positives = 99/195 (50%), Gaps = 20/195 (10%)
Frame = -1
Query: 525 ADPQPSMRRLIKPFKPPRAASAATLRHFSAD------PQPSPDLSTP----------VSQ 394
A P+ +L++ F+ + +RHF + PQ + + STP + +
Sbjct: 4 AQSAPNRLKLLRIFQYHALQPSLFVRHFCIELAQPSPPQQNDEESTPSPPLQNDESIIKR 63
Query: 393 TLSLLQITDPSSWPTNXXXXXXXXXXXXXXXL--KITRQLPNCQNALQFFNHLKTNSHLS 220
+ LLQI D W T L +I R+LP+ AL+F +L+ N S
Sbjct: 64 AVQLLQIPD-HEWNTTQLNNLIFSALSPSPRLLFQIARRLPSSSQALKFLKYLQNNFPTS 122
Query: 219 DSAPLA--FQAVLELAMRENPDCPGKLYELFVSSKDQNTPLSVNAGTLLIKCFSRAKMLD 46
++ L+ FQA+ ELA REN D LYEL+ SK+ N PL++N+ TLL++ F R +++
Sbjct: 123 NTQHLSSTFQAIFELASREN-DSRTNLYELYKVSKEWNIPLTINSATLLLRFFGRIGLVE 181
Query: 45 EMIMVFDAIDDEVKN 1
+ ++F+ ++ +KN
Sbjct: 182 KSFILFNELEHCIKN 196
>ref|XP_006397795.1| hypothetical protein EUTSA_v10001319mg [Eutrema salsugineum]
gi|557098868|gb|ESQ39248.1| hypothetical protein
EUTSA_v10001319mg [Eutrema salsugineum]
Length = 776
Score = 76.3 bits (186), Expect = 4e-12
Identities = 59/184 (32%), Positives = 90/184 (48%), Gaps = 4/184 (2%)
Frame = -1
Query: 540 LRHFSADPQPSMRRLIKPFKPPRAASAATLRHFSADPQPSPDLSTPVSQTLSLLQITDPS 361
LR FSA+ PS K KP S A R F + P + L L ++ S
Sbjct: 24 LRRFSAESDPS-----KVIKPDCEESVA--REFLEHLRDIPQHDWVSCELLDSLLLSSSS 76
Query: 360 SWPTNXXXXXXXXXXXXXXXLKITRQLPNCQNALQFFNHLKTNS----HLSDSAPLAFQA 193
S +ITR+L + A+ F ++L S H +S +AFQ+
Sbjct: 77 S---------------PRVFSQITRRLDSYSLAVSFLDYLNEKSESLKHRDESLAVAFQS 121
Query: 192 VLELAMRENPDCPGKLYELFVSSKDQNTPLSVNAGTLLIKCFSRAKMLDEMIMVFDAIDD 13
V+E A +E PD KL +L+ +SK++ PL+ NA LLI+ F R ML++ ++V++ +D
Sbjct: 122 VIEYACKE-PDSRDKLLKLYETSKEKKVPLTFNAAKLLIRWFGRLGMLNQSVLVYEELDP 180
Query: 12 EVKN 1
+VKN
Sbjct: 181 DVKN 184
>ref|XP_002320827.2| pentatricopeptide repeat-containing family protein, partial
[Populus trichocarpa] gi|550323783|gb|EEE99142.2|
pentatricopeptide repeat-containing family protein,
partial [Populus trichocarpa]
Length = 720
Score = 74.3 bits (181), Expect = 2e-11
Identities = 42/103 (40%), Positives = 67/103 (65%), Gaps = 4/103 (3%)
Frame = -1
Query: 297 KITRQLPNCQNALQFFNHLKTNSHLS-DSAPL---AFQAVLELAMRENPDCPGKLYELFV 130
+ITR+LP+ AL+F N+L+ NS S D+ L FQA+ ELA E PD L L+
Sbjct: 45 QITRRLPSSSQALKFLNYLQNNSPSSPDTQSLLSYTFQAIFELAFCE-PDSNANLSRLYK 103
Query: 129 SSKDQNTPLSVNAGTLLIKCFSRAKMLDEMIMVFDAIDDEVKN 1
+SK+ N PL+VNA + L++ R+++++E +++F+ +D VKN
Sbjct: 104 TSKELNIPLTVNAASFLLRASGRSELVEESLILFNDLDPSVKN 146
>gb|AAM61467.1| unknown [Arabidopsis thaliana]
Length = 766
Score = 68.6 bits (166), Expect = 9e-10
Identities = 51/163 (31%), Positives = 81/163 (49%), Gaps = 12/163 (7%)
Frame = -1
Query: 453 LRHFSADPQPSPDLSTP-----VSQTLSLLQITDPSSWPTNXXXXXXXXXXXXXXXL--- 298
LR FS D P P++ + V + + LQ T W ++ L
Sbjct: 23 LRRFSYDVDPRPEIKSESQEFVVVKFVKTLQNTPQHDWASSESLSALVVSSSSASPLVFS 82
Query: 297 KITRQLPNCQNALQFFNHLKTNSHL----SDSAPLAFQAVLELAMRENPDCPGKLYELFV 130
+ITR+L + A+ FF +L S +S LA Q+V+E A E PD KL L+
Sbjct: 83 QITRRLGSYSLAISFFEYLDAKSQSLKRREESLSLALQSVIEFAGSE-PDPRDKLLRLYE 141
Query: 129 SSKDQNTPLSVNAGTLLIKCFSRAKMLDEMIMVFDAIDDEVKN 1
+K++N PL+V A LLI+ F R M+++ ++V++ +D +KN
Sbjct: 142 IAKEKNIPLTVVATKLLIRWFGRMGMVNQSVLVYERLDSNMKN 184
>ref|NP_198189.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|9502152|gb|AAF88005.1| similar to a large family of
Arabidopsis thaliana salt inducible protein-like
proteins; contains similarity to Pfam family PF01535
(Domain of unknown function), score=340.5, E=1.9e-98,
N=2 [Arabidopsis thaliana] gi|332006410|gb|AED93793.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 727
Score = 68.2 bits (165), Expect = 1e-09
Identities = 50/163 (30%), Positives = 81/163 (49%), Gaps = 12/163 (7%)
Frame = -1
Query: 453 LRHFSADPQPSPDLSTP-----VSQTLSLLQITDPSSWPTNXXXXXXXXXXXXXXXL--- 298
LR FS D P P++ + V + + LQ T W ++ L
Sbjct: 23 LRRFSYDVDPRPEIKSESQEFVVVKFVKTLQNTPQHDWASSESLSALVVSSSSASPLVFS 82
Query: 297 KITRQLPNCQNALQFFNHLKTNSHL----SDSAPLAFQAVLELAMRENPDCPGKLYELFV 130
+ITR+L + A+ FF +L S +S LA Q+V+E A E PD KL L+
Sbjct: 83 QITRRLGSYSLAISFFEYLDAKSQSLKRREESLSLALQSVIEFAGSE-PDPRDKLLRLYE 141
Query: 129 SSKDQNTPLSVNAGTLLIKCFSRAKMLDEMIMVFDAIDDEVKN 1
+K++N PL++ A LLI+ F R M+++ ++V++ +D +KN
Sbjct: 142 IAKEKNIPLTIVATKLLIRWFGRMGMVNQSVLVYERLDSNMKN 184
>ref|NP_680234.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174514|sp|Q9LKU8.1|PP401_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g28460 gi|9502149|gb|AAF88002.1| contains similarity
to Pfam family PF01535 (Domain of unknown function),
score=340.5, E=1.9e-98, N=2 [Arabidopsis thaliana]
gi|15529206|gb|AAK97697.1| AT5g28460/F21B23_120
[Arabidopsis thaliana] gi|27363272|gb|AAO11555.1|
At5g28460/F21B23_120 [Arabidopsis thaliana]
gi|332006418|gb|AED93801.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 766
Score = 68.2 bits (165), Expect = 1e-09
Identities = 50/163 (30%), Positives = 81/163 (49%), Gaps = 12/163 (7%)
Frame = -1
Query: 453 LRHFSADPQPSPDLSTP-----VSQTLSLLQITDPSSWPTNXXXXXXXXXXXXXXXL--- 298
LR FS D P P++ + V + + LQ T W ++ L
Sbjct: 23 LRRFSYDVDPRPEIKSESQEFVVVKFVKTLQNTPQHDWASSESLSALVVSSSSASPLVFS 82
Query: 297 KITRQLPNCQNALQFFNHLKTNSHL----SDSAPLAFQAVLELAMRENPDCPGKLYELFV 130
+ITR+L + A+ FF +L S +S LA Q+V+E A E PD KL L+
Sbjct: 83 QITRRLGSYSLAISFFEYLDAKSQSLKRREESLSLALQSVIEFAGSE-PDPRDKLLRLYE 141
Query: 129 SSKDQNTPLSVNAGTLLIKCFSRAKMLDEMIMVFDAIDDEVKN 1
+K++N PL++ A LLI+ F R M+++ ++V++ +D +KN
Sbjct: 142 IAKEKNIPLTIVATKLLIRWFGRMGMVNQSVLVYERLDSNMKN 184
>ref|NP_191711.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183498|sp|Q9M316.1|PP292_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g61520, mitochondrial; Flags: Precursor
gi|6850843|emb|CAB71082.1| putative protein [Arabidopsis
thaliana] gi|332646696|gb|AEE80217.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 766
Score = 68.2 bits (165), Expect = 1e-09
Identities = 51/163 (31%), Positives = 80/163 (49%), Gaps = 12/163 (7%)
Frame = -1
Query: 453 LRHFSADPQPSPDLSTP-----VSQTLSLLQITDPSSWPTNXXXXXXXXXXXXXXXL--- 298
LR FS D P P++ V + + LQ T W ++ L
Sbjct: 23 LRRFSYDVDPRPEIKLESQEFVVVKFVKTLQKTPQHDWASSESLSALVVSSSSASPLVFS 82
Query: 297 KITRQLPNCQNALQFFNHLKTNSHL----SDSAPLAFQAVLELAMRENPDCPGKLYELFV 130
+ITR+L + A+ FF +L S +S LA Q+V+E A E PD KL L+
Sbjct: 83 QITRRLGSYSLAISFFEYLDAKSQSLKRREESLSLALQSVIEFAGSE-PDPRDKLLRLYE 141
Query: 129 SSKDQNTPLSVNAGTLLIKCFSRAKMLDEMIMVFDAIDDEVKN 1
+K++N PL+V A LLI+ F R M+++ ++V++ +D +KN
Sbjct: 142 IAKEKNIPLTVVATNLLIRWFGRMGMVNQSVLVYERLDSNMKN 184
>ref|XP_006409459.1| hypothetical protein EUTSA_v10022571mg [Eutrema salsugineum]
gi|557110621|gb|ESQ50912.1| hypothetical protein
EUTSA_v10022571mg [Eutrema salsugineum]
Length = 766
Score = 66.6 bits (161), Expect = 3e-09
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 12/163 (7%)
Frame = -1
Query: 453 LRHFSADPQPSPDLSTPVSQTLSL-----LQITDPSSWPTNXXXXXXXXXXXXXXXL--- 298
LR FSAD P P + + +++ + LQ W ++ L
Sbjct: 23 LRRFSADVYPPPGIKSESQKSVEVQFLDNLQKIPQHDWVSSESLSSLLASSSSVSPLVFS 82
Query: 297 KITRQLPNCQNALQFFNHLKTNSHL----SDSAPLAFQAVLELAMRENPDCPGKLYELFV 130
+ITR+L + A+ FF +L S D+ L FQ+V+E A E PD KL L+
Sbjct: 83 QITRRLGSYSLAVSFFEYLDAKSQSLERREDALSLVFQSVIEFAGSE-PDSRDKLLRLYE 141
Query: 129 SSKDQNTPLSVNAGTLLIKCFSRAKMLDEMIMVFDAIDDEVKN 1
+K++N PL+V A LLI+ F R M ++ I+V++ +D ++N
Sbjct: 142 IAKEKNIPLTVVATKLLIRWFGRMGMANQSILVYEQLDSNMQN 184
>ref|XP_004300812.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 763
Score = 64.3 bits (155), Expect = 2e-08
Identities = 51/177 (28%), Positives = 83/177 (46%), Gaps = 12/177 (6%)
Frame = -1
Query: 498 LIKPFKPPRAASAATL-RHFSADPQPSP-DLSTPVSQTLSLLQITDPSSWPTNXXXXXXX 325
L+KP P + L H +P +P D + ++Q L +LQ+ P+ N
Sbjct: 10 LLKPQTPKSNSPFFLLTHHLCTNPISNPNDEDSIITQVLQVLQVLQPNEQHWNFPQLHTL 69
Query: 324 XXXXXXXXLK------ITRQLPNCQNALQFFNHLKTNSHLSDSAPL----AFQAVLELAM 175
ITR L + AL+FF+ + N D +F+A++EL +
Sbjct: 70 LFPSSTSSPSPRTLLHITRCLASPTKALKFFDFVSQNLTPQDPPKAVLSSSFEALVELTL 129
Query: 174 RENPDCPGKLYELFVSSKDQNTPLSVNAGTLLIKCFSRAKMLDEMIMVFDAIDDEVK 4
R+ P LYEL+ +KD+N P+S A LL++ RA M +E ++VF+ +D +K
Sbjct: 130 RQPPS-ETNLYELYKMAKDRNVPISPKAVRLLVQSMRRAGMEEEALLVFNELDSALK 185
>ref|XP_002878387.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297324225|gb|EFH54646.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 766
Score = 63.9 bits (154), Expect = 2e-08
Identities = 38/103 (36%), Positives = 61/103 (59%), Gaps = 4/103 (3%)
Frame = -1
Query: 297 KITRQLPNCQNALQFFNHLKTNSHL----SDSAPLAFQAVLELAMRENPDCPGKLYELFV 130
+ITR+L + A+ FF +L + S +S LA Q+V+E A E PD KL L+
Sbjct: 83 QITRRLGSYSLAISFFEYLDSKSQSLKRREESLSLALQSVIEFAGSE-PDSRDKLLRLYE 141
Query: 129 SSKDQNTPLSVNAGTLLIKCFSRAKMLDEMIMVFDAIDDEVKN 1
+K++N PL+V A LLI+ F R M ++ ++V++ +D +KN
Sbjct: 142 IAKEKNIPLTVVATKLLIRWFGRMGMANQSVLVYERLDSNMKN 184
>ref|XP_004301483.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 771
Score = 61.6 bits (148), Expect = 1e-07
Identities = 36/101 (35%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
Frame = -1
Query: 294 ITRQLPNCQNALQFFNHLKTNSHLSDSAPL----AFQAVLELAMRENPDCPGKLYELFVS 127
ITR+L + AL+FF+ + N D +FQA++EL +R+ P LYEL+
Sbjct: 89 ITRRLASPNKALKFFDFVSQNLTPQDPPKALLSSSFQALVELTLRQPPS-ETNLYELYKM 147
Query: 126 SKDQNTPLSVNAGTLLIKCFSRAKMLDEMIMVFDAIDDEVK 4
+KD+N P+S A LL++ RA M +E ++VF+ ++ +K
Sbjct: 148 AKDRNVPISPKAAGLLVQSMGRAGMEEEALIVFNELESGLK 188
>ref|XP_006292416.1| hypothetical protein CARUB_v10018630mg [Capsella rubella]
gi|482561123|gb|EOA25314.1| hypothetical protein
CARUB_v10018630mg [Capsella rubella]
Length = 767
Score = 60.5 bits (145), Expect = 3e-07
Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 12/163 (7%)
Frame = -1
Query: 453 LRHFSADPQPSPDLSTP-----VSQTLSLLQITDPSSWPTNXXXXXXXXXXXXXXXL--- 298
LR FS + +P P + + V++ L LQ W ++ L
Sbjct: 23 LRRFSDNIEPRPAIKSESQESVVAKFLENLQRLPQHDWASSESLSSLLVSSSSVSPLVFP 82
Query: 297 KITRQLPNCQNALQFFNHLKTNSHL----SDSAPLAFQAVLELAMRENPDCPGKLYELFV 130
+ITR+L + A+ FF +L S +S L Q+V+E A E PD KL +L+
Sbjct: 83 QITRRLGSYSLAISFFEYLDATSQSLKRREESLSLTLQSVIEFAGSE-PDSQDKLLQLYE 141
Query: 129 SSKDQNTPLSVNAGTLLIKCFSRAKMLDEMIMVFDAIDDEVKN 1
+ ++N P +V A LLI+ F R M+++ ++V++ +D +KN
Sbjct: 142 IAIEKNIPFTVVATKLLIRWFGRMGMVNQSVLVYERLDSNMKN 184