BLASTX nr result
ID: Rehmannia23_contig00020125
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00020125
(487 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAG31377.1| topoisomerase I [Catharanthus roseus] 222 5e-56
dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata] 211 6e-53
ref|XP_002300344.1| DNA topoisomerase family protein [Populus tr... 211 1e-52
gb|AAD08711.1| topoisomerase I [Nicotiana tabacum] gi|14626487|g... 210 1e-52
gb|EPS68250.1| hypothetical protein M569_06521 [Genlisea aurea] 210 2e-52
dbj|BAK32962.1| topoisomerase I [Ophiorrhiza trichocarpon var. g... 209 3e-52
dbj|BAK32958.1| topoisomerase I [Ophiorrhiza pedunculata] 209 3e-52
emb|CBI28783.3| unnamed protein product [Vitis vinifera] 209 4e-52
ref|XP_002265386.1| PREDICTED: DNA topoisomerase 1-like [Vitis v... 209 4e-52
ref|XP_002317355.1| DNA topoisomerase family protein [Populus tr... 207 9e-52
ref|XP_006364175.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisom... 207 1e-51
gb|EOY12192.1| DNA topoisomerase I alpha isoform 4, partial [The... 207 1e-51
gb|EOY12191.1| DNA topoisomerase I alpha isoform 3 [Theobroma ca... 207 1e-51
gb|EOY12189.1| DNA topoisomerase I alpha isoform 1 [Theobroma ca... 207 1e-51
ref|XP_004149585.1| PREDICTED: DNA topoisomerase 1-like [Cucumis... 207 2e-51
dbj|BAK32960.1| topoisomerase I [Ophiorrhiza pseudofasciculata] 206 2e-51
gb|ESW03467.1| hypothetical protein PHAVU_011G016600g [Phaseolus... 206 3e-51
ref|XP_002529020.1| DNA topoisomerase type I, putative [Ricinus ... 204 8e-51
dbj|BAG31374.1| topoisomerase I [Ophiorrhiza liukiuensis] 204 8e-51
dbj|BAG31373.1| topoisomerase I [Ophiorrhiza pumila] 204 8e-51
>dbj|BAG31377.1| topoisomerase I [Catharanthus roseus]
Length = 910
Score = 222 bits (565), Expect = 5e-56
Identities = 104/111 (93%), Positives = 108/111 (97%)
Frame = +1
Query: 1 NIGKDAPIPECPIPGERWKEIRHDNTVTWLAYWNDPINPKEFKYVFMAARSTLKGQSDKE 180
NIGKDAPIPECP+PGERWKE+RHDNTVTWLA+WNDPINPKEFKYVF+AA STLKG SDKE
Sbjct: 530 NIGKDAPIPECPVPGERWKEVRHDNTVTWLAFWNDPINPKEFKYVFLAASSTLKGLSDKE 589
Query: 181 KYEKARLLKDYIQGIRAAYIKDFASKDPTKKQIAVATYLIDKLALRAGNEK 333
KYEKARLLKDYIQGIRAAY KDFASKDPTKKQIAVATYLIDKLALRAGNEK
Sbjct: 590 KYEKARLLKDYIQGIRAAYTKDFASKDPTKKQIAVATYLIDKLALRAGNEK 640
Score = 61.2 bits (147), Expect = 1e-07
Identities = 30/36 (83%), Positives = 33/36 (91%)
Frame = +1
Query: 325 NEKLSRETRGGDVAEKVVVYQLANKEVAIIFNHQRT 432
++ LSRET+GGDVAEKVVVYQ ANKEVAII NHQRT
Sbjct: 740 DDMLSRETKGGDVAEKVVVYQHANKEVAIICNHQRT 775
>dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata]
Length = 894
Score = 211 bits (538), Expect = 6e-53
Identities = 100/111 (90%), Positives = 106/111 (95%)
Frame = +1
Query: 1 NIGKDAPIPECPIPGERWKEIRHDNTVTWLAYWNDPINPKEFKYVFMAARSTLKGQSDKE 180
NIGKDAPIPECPIPGE WKEIRHDNTVTWLA+WNDPI P+EFKYVF+AA S+LKGQSDKE
Sbjct: 516 NIGKDAPIPECPIPGESWKEIRHDNTVTWLAFWNDPIKPREFKYVFLAASSSLKGQSDKE 575
Query: 181 KYEKARLLKDYIQGIRAAYIKDFASKDPTKKQIAVATYLIDKLALRAGNEK 333
KYEKARLLKD+IQGIRAAY KDFASKD TK+QIAVATYLIDKLALRAGNEK
Sbjct: 576 KYEKARLLKDFIQGIRAAYTKDFASKDITKRQIAVATYLIDKLALRAGNEK 626
Score = 60.1 bits (144), Expect = 3e-07
Identities = 29/36 (80%), Positives = 33/36 (91%)
Frame = +1
Query: 325 NEKLSRETRGGDVAEKVVVYQLANKEVAIIFNHQRT 432
+E LSRET+GG+VAEK+VVYQ ANKEVAII NHQRT
Sbjct: 726 DEMLSRETKGGNVAEKIVVYQHANKEVAIICNHQRT 761
>ref|XP_002300344.1| DNA topoisomerase family protein [Populus trichocarpa]
gi|222847602|gb|EEE85149.1| DNA topoisomerase family
protein [Populus trichocarpa]
Length = 877
Score = 211 bits (536), Expect = 1e-52
Identities = 99/111 (89%), Positives = 105/111 (94%)
Frame = +1
Query: 1 NIGKDAPIPECPIPGERWKEIRHDNTVTWLAYWNDPINPKEFKYVFMAARSTLKGQSDKE 180
NIGKDAPIPECPIPGERWKE++HDNTVTWLA+WNDPINPKEFKYVF+AA S+LKGQSDKE
Sbjct: 499 NIGKDAPIPECPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKE 558
Query: 181 KYEKARLLKDYIQGIRAAYIKDFASKDPTKKQIAVATYLIDKLALRAGNEK 333
KYEKAR LKDYI IRAAY KDFASKD TK+QIAVATYLIDKLALRAGNEK
Sbjct: 559 KYEKARKLKDYIHNIRAAYTKDFASKDITKRQIAVATYLIDKLALRAGNEK 609
>gb|AAD08711.1| topoisomerase I [Nicotiana tabacum] gi|14626487|gb|AAK69776.1|
topoisomerase I [Nicotiana tabacum]
Length = 852
Score = 210 bits (535), Expect = 1e-52
Identities = 97/111 (87%), Positives = 105/111 (94%)
Frame = +1
Query: 1 NIGKDAPIPECPIPGERWKEIRHDNTVTWLAYWNDPINPKEFKYVFMAARSTLKGQSDKE 180
NIGK APIPECPIPGERWKE+RHDNTVTWLA+WNDPINP+EFKYVF+AA S+LKGQSDKE
Sbjct: 499 NIGKGAPIPECPIPGERWKEVRHDNTVTWLAFWNDPINPREFKYVFLAASSSLKGQSDKE 558
Query: 181 KYEKARLLKDYIQGIRAAYIKDFASKDPTKKQIAVATYLIDKLALRAGNEK 333
KYEKAR LKDYI+GIR+AY KDF SKDP K+QIAVATYLIDKLALRAGNEK
Sbjct: 559 KYEKARRLKDYIEGIRSAYTKDFTSKDPVKRQIAVATYLIDKLALRAGNEK 609
>gb|EPS68250.1| hypothetical protein M569_06521 [Genlisea aurea]
Length = 614
Score = 210 bits (534), Expect = 2e-52
Identities = 101/112 (90%), Positives = 103/112 (91%)
Frame = +1
Query: 1 NIGKDAPIPECPIPGERWKEIRHDNTVTWLAYWNDPINPKEFKYVFMAARSTLKGQSDKE 180
NIGK APIPECPIPGERWKEIRHDNTVTWLAYWNDPIN KEFKYVF+AA STLKGQSDKE
Sbjct: 499 NIGKGAPIPECPIPGERWKEIRHDNTVTWLAYWNDPINVKEFKYVFLAASSTLKGQSDKE 558
Query: 181 KYEKARLLKDYIQGIRAAYIKDFASKDPTKKQIAVATYLIDKLALRAGNEKL 336
KYEKARLLKDYI IR AY KDF SKDP KKQIAVATYLIDKLALRAGNEK+
Sbjct: 559 KYEKARLLKDYILDIRQAYTKDFTSKDPMKKQIAVATYLIDKLALRAGNEKV 610
>dbj|BAK32962.1| topoisomerase I [Ophiorrhiza trichocarpon var. glabra]
Length = 920
Score = 209 bits (532), Expect = 3e-52
Identities = 101/112 (90%), Positives = 105/112 (93%), Gaps = 1/112 (0%)
Frame = +1
Query: 1 NIGKDAPIPECPIPGERWKEIRHDNTVTWLAYWNDPINPKEFKYVFMAARSTLKGQSDKE 180
NIGKDAPIPECPIPGERWKE+R+DNTVTWLAYWNDPIN KEFKYVF+AA STLKGQSDKE
Sbjct: 547 NIGKDAPIPECPIPGERWKEVRNDNTVTWLAYWNDPINQKEFKYVFLAASSTLKGQSDKE 606
Query: 181 KYEKARLLKDYIQGIRAAYIKDFA-SKDPTKKQIAVATYLIDKLALRAGNEK 333
KYEKARLLKDYI GIRAAY KDF +KDP KKQIAVATYLIDKLALRAGNEK
Sbjct: 607 KYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEK 658
Score = 56.2 bits (134), Expect = 4e-06
Identities = 27/36 (75%), Positives = 32/36 (88%)
Frame = +1
Query: 325 NEKLSRETRGGDVAEKVVVYQLANKEVAIIFNHQRT 432
++ LS++T GG+VAEKVVVYQ ANKEVAII NHQRT
Sbjct: 758 DDMLSKKTNGGEVAEKVVVYQHANKEVAIICNHQRT 793
>dbj|BAK32958.1| topoisomerase I [Ophiorrhiza pedunculata]
Length = 920
Score = 209 bits (532), Expect = 3e-52
Identities = 101/112 (90%), Positives = 105/112 (93%), Gaps = 1/112 (0%)
Frame = +1
Query: 1 NIGKDAPIPECPIPGERWKEIRHDNTVTWLAYWNDPINPKEFKYVFMAARSTLKGQSDKE 180
NIGKDAPIPECPIPGERWKE+R+DNTVTWLAYWNDPIN KEFKYVF+AA STLKGQSDKE
Sbjct: 547 NIGKDAPIPECPIPGERWKEVRNDNTVTWLAYWNDPINQKEFKYVFLAASSTLKGQSDKE 606
Query: 181 KYEKARLLKDYIQGIRAAYIKDFA-SKDPTKKQIAVATYLIDKLALRAGNEK 333
KYEKARLLKDYI GIRAAY KDF +KDP KKQIAVATYLIDKLALRAGNEK
Sbjct: 607 KYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEK 658
Score = 56.2 bits (134), Expect = 4e-06
Identities = 27/36 (75%), Positives = 32/36 (88%)
Frame = +1
Query: 325 NEKLSRETRGGDVAEKVVVYQLANKEVAIIFNHQRT 432
++ LS++T GG+VAEKVVVYQ ANKEVAII NHQRT
Sbjct: 758 DDMLSKKTNGGEVAEKVVVYQHANKEVAIICNHQRT 793
>emb|CBI28783.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 209 bits (531), Expect = 4e-52
Identities = 102/138 (73%), Positives = 114/138 (82%)
Frame = +1
Query: 1 NIGKDAPIPECPIPGERWKEIRHDNTVTWLAYWNDPINPKEFKYVFMAARSTLKGQSDKE 180
NIGK+AP+PECPIPGERWKE+RHDNTVTWLA+WNDPINPKEFKYVF+AA S+LKGQSDKE
Sbjct: 346 NIGKEAPVPECPIPGERWKEVRHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKE 405
Query: 181 KYEKARLLKDYIQGIRAAYIKDFASKDPTKKQIAVATYLIDKLALRAGNEKLSRETRGGD 360
KYEKARLLKDYIQ IRA Y KDF +KD K+QIAVATYLIDKLALRAGNEK D
Sbjct: 406 KYEKARLLKDYIQNIRATYTKDFTNKDTMKRQIAVATYLIDKLALRAGNEK------DDD 459
Query: 361 VAEKVVVYQLANKEVAII 414
A+ V L + VA++
Sbjct: 460 EADTVGCCTLKVENVALV 477
>ref|XP_002265386.1| PREDICTED: DNA topoisomerase 1-like [Vitis vinifera]
Length = 883
Score = 209 bits (531), Expect = 4e-52
Identities = 102/138 (73%), Positives = 114/138 (82%)
Frame = +1
Query: 1 NIGKDAPIPECPIPGERWKEIRHDNTVTWLAYWNDPINPKEFKYVFMAARSTLKGQSDKE 180
NIGK+AP+PECPIPGERWKE+RHDNTVTWLA+WNDPINPKEFKYVF+AA S+LKGQSDKE
Sbjct: 505 NIGKEAPVPECPIPGERWKEVRHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKE 564
Query: 181 KYEKARLLKDYIQGIRAAYIKDFASKDPTKKQIAVATYLIDKLALRAGNEKLSRETRGGD 360
KYEKARLLKDYIQ IRA Y KDF +KD K+QIAVATYLIDKLALRAGNEK D
Sbjct: 565 KYEKARLLKDYIQNIRATYTKDFTNKDTMKRQIAVATYLIDKLALRAGNEK------DDD 618
Query: 361 VAEKVVVYQLANKEVAII 414
A+ V L + VA++
Sbjct: 619 EADTVGCCTLKVENVALV 636
>ref|XP_002317355.1| DNA topoisomerase family protein [Populus trichocarpa]
gi|222860420|gb|EEE97967.1| DNA topoisomerase family
protein [Populus trichocarpa]
Length = 860
Score = 207 bits (528), Expect = 9e-52
Identities = 97/111 (87%), Positives = 104/111 (93%)
Frame = +1
Query: 1 NIGKDAPIPECPIPGERWKEIRHDNTVTWLAYWNDPINPKEFKYVFMAARSTLKGQSDKE 180
NIGKDAPIP+CPIPGERWKE++HDNTVTWLA+WNDPINPKEFKYVF+AA S+LKGQSDKE
Sbjct: 482 NIGKDAPIPKCPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKE 541
Query: 181 KYEKARLLKDYIQGIRAAYIKDFASKDPTKKQIAVATYLIDKLALRAGNEK 333
KYEKAR LKDYI IR AY KDFASKD TK+QIAVATYLIDKLALRAGNEK
Sbjct: 542 KYEKARKLKDYIHNIRTAYTKDFASKDITKRQIAVATYLIDKLALRAGNEK 592
>ref|XP_006364175.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 1-like [Solanum
tuberosum]
Length = 905
Score = 207 bits (527), Expect = 1e-51
Identities = 94/111 (84%), Positives = 104/111 (93%)
Frame = +1
Query: 1 NIGKDAPIPECPIPGERWKEIRHDNTVTWLAYWNDPINPKEFKYVFMAARSTLKGQSDKE 180
NIGK P+PECPIPG+RWKE+RHDNTVTWLA+WNDPINP+EFKYVF+AA S+LKGQSDKE
Sbjct: 527 NIGKGVPVPECPIPGQRWKEVRHDNTVTWLAFWNDPINPREFKYVFLAASSSLKGQSDKE 586
Query: 181 KYEKARLLKDYIQGIRAAYIKDFASKDPTKKQIAVATYLIDKLALRAGNEK 333
KYEKAR LKDYI+GIR+AY KDF SKDP K+QIAVATYLIDKLALRAGNEK
Sbjct: 587 KYEKARRLKDYIEGIRSAYTKDFTSKDPVKRQIAVATYLIDKLALRAGNEK 637
>gb|EOY12192.1| DNA topoisomerase I alpha isoform 4, partial [Theobroma cacao]
Length = 733
Score = 207 bits (527), Expect = 1e-51
Identities = 96/111 (86%), Positives = 105/111 (94%)
Frame = +1
Query: 1 NIGKDAPIPECPIPGERWKEIRHDNTVTWLAYWNDPINPKEFKYVFMAARSTLKGQSDKE 180
NIGKDAPIPECPIPGERWK+I+HDNTVTWLA+WNDPINPKEFKYVF+AA S+LKGQSDKE
Sbjct: 399 NIGKDAPIPECPIPGERWKDIKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKE 458
Query: 181 KYEKARLLKDYIQGIRAAYIKDFASKDPTKKQIAVATYLIDKLALRAGNEK 333
KYEKAR+LKDYI+ IRAAY KDF +KD K+QIAVATYLIDKLALRAGNEK
Sbjct: 459 KYEKARMLKDYIKNIRAAYTKDFTTKDVMKRQIAVATYLIDKLALRAGNEK 509
Score = 56.2 bits (134), Expect = 4e-06
Identities = 27/36 (75%), Positives = 32/36 (88%)
Frame = +1
Query: 325 NEKLSRETRGGDVAEKVVVYQLANKEVAIIFNHQRT 432
+E L++ET+ GDVAEKVVVYQ ANKEVAII NHQR+
Sbjct: 609 DEMLNKETKDGDVAEKVVVYQRANKEVAIICNHQRS 644
>gb|EOY12191.1| DNA topoisomerase I alpha isoform 3 [Theobroma cacao]
gi|508720296|gb|EOY12193.1| DNA topoisomerase I alpha
isoform 3 [Theobroma cacao]
Length = 836
Score = 207 bits (527), Expect = 1e-51
Identities = 96/111 (86%), Positives = 105/111 (94%)
Frame = +1
Query: 1 NIGKDAPIPECPIPGERWKEIRHDNTVTWLAYWNDPINPKEFKYVFMAARSTLKGQSDKE 180
NIGKDAPIPECPIPGERWK+I+HDNTVTWLA+WNDPINPKEFKYVF+AA S+LKGQSDKE
Sbjct: 526 NIGKDAPIPECPIPGERWKDIKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKE 585
Query: 181 KYEKARLLKDYIQGIRAAYIKDFASKDPTKKQIAVATYLIDKLALRAGNEK 333
KYEKAR+LKDYI+ IRAAY KDF +KD K+QIAVATYLIDKLALRAGNEK
Sbjct: 586 KYEKARMLKDYIKNIRAAYTKDFTTKDVMKRQIAVATYLIDKLALRAGNEK 636
>gb|EOY12189.1| DNA topoisomerase I alpha isoform 1 [Theobroma cacao]
gi|508720293|gb|EOY12190.1| DNA topoisomerase I alpha
isoform 1 [Theobroma cacao]
Length = 904
Score = 207 bits (527), Expect = 1e-51
Identities = 96/111 (86%), Positives = 105/111 (94%)
Frame = +1
Query: 1 NIGKDAPIPECPIPGERWKEIRHDNTVTWLAYWNDPINPKEFKYVFMAARSTLKGQSDKE 180
NIGKDAPIPECPIPGERWK+I+HDNTVTWLA+WNDPINPKEFKYVF+AA S+LKGQSDKE
Sbjct: 526 NIGKDAPIPECPIPGERWKDIKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKE 585
Query: 181 KYEKARLLKDYIQGIRAAYIKDFASKDPTKKQIAVATYLIDKLALRAGNEK 333
KYEKAR+LKDYI+ IRAAY KDF +KD K+QIAVATYLIDKLALRAGNEK
Sbjct: 586 KYEKARMLKDYIKNIRAAYTKDFTTKDVMKRQIAVATYLIDKLALRAGNEK 636
Score = 56.2 bits (134), Expect = 4e-06
Identities = 27/36 (75%), Positives = 32/36 (88%)
Frame = +1
Query: 325 NEKLSRETRGGDVAEKVVVYQLANKEVAIIFNHQRT 432
+E L++ET+ GDVAEKVVVYQ ANKEVAII NHQR+
Sbjct: 736 DEMLNKETKDGDVAEKVVVYQRANKEVAIICNHQRS 771
>ref|XP_004149585.1| PREDICTED: DNA topoisomerase 1-like [Cucumis sativus]
gi|449503189|ref|XP_004161878.1| PREDICTED: DNA
topoisomerase 1-like [Cucumis sativus]
Length = 889
Score = 207 bits (526), Expect = 2e-51
Identities = 96/111 (86%), Positives = 104/111 (93%)
Frame = +1
Query: 1 NIGKDAPIPECPIPGERWKEIRHDNTVTWLAYWNDPINPKEFKYVFMAARSTLKGQSDKE 180
NIGK APIPECPIPGERWKE+RHDNTVTWLA+WNDPIN KEFKYVF+AA S+LKGQSDKE
Sbjct: 511 NIGKGAPIPECPIPGERWKEVRHDNTVTWLAFWNDPINQKEFKYVFLAASSSLKGQSDKE 570
Query: 181 KYEKARLLKDYIQGIRAAYIKDFASKDPTKKQIAVATYLIDKLALRAGNEK 333
KYEKAR+LKDYI+ IR AY KDF SKDPT++QIAVATYLIDKLALRAGNEK
Sbjct: 571 KYEKARMLKDYIKNIRNAYTKDFTSKDPTRRQIAVATYLIDKLALRAGNEK 621
>dbj|BAK32960.1| topoisomerase I [Ophiorrhiza pseudofasciculata]
Length = 925
Score = 206 bits (525), Expect = 2e-51
Identities = 100/112 (89%), Positives = 104/112 (92%), Gaps = 1/112 (0%)
Frame = +1
Query: 1 NIGKDAPIPECPIPGERWKEIRHDNTVTWLAYWNDPINPKEFKYVFMAARSTLKGQSDKE 180
NIGKDAPIPECPIPGERWKE+R+ NTVTWLAYWNDPIN KEFKYVF+AA STLKGQSDKE
Sbjct: 546 NIGKDAPIPECPIPGERWKEVRNGNTVTWLAYWNDPINQKEFKYVFLAASSTLKGQSDKE 605
Query: 181 KYEKARLLKDYIQGIRAAYIKDFA-SKDPTKKQIAVATYLIDKLALRAGNEK 333
KYEKARLLKDYI GIRAAY KDF +KDP KKQIAVATYLIDKLALRAGNEK
Sbjct: 606 KYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEK 657
Score = 56.6 bits (135), Expect = 3e-06
Identities = 27/36 (75%), Positives = 32/36 (88%)
Frame = +1
Query: 325 NEKLSRETRGGDVAEKVVVYQLANKEVAIIFNHQRT 432
++ LS+ET+GG+VAE VVVYQ ANKEVAII NHQRT
Sbjct: 757 DDMLSKETKGGEVAENVVVYQHANKEVAIICNHQRT 792
>gb|ESW03467.1| hypothetical protein PHAVU_011G016600g [Phaseolus vulgaris]
gi|561004474|gb|ESW03468.1| hypothetical protein
PHAVU_011G016600g [Phaseolus vulgaris]
Length = 924
Score = 206 bits (523), Expect = 3e-51
Identities = 97/111 (87%), Positives = 104/111 (93%)
Frame = +1
Query: 1 NIGKDAPIPECPIPGERWKEIRHDNTVTWLAYWNDPINPKEFKYVFMAARSTLKGQSDKE 180
NIGKDAPIPECPIPGERWKEIRHDNTVTWLAYW+DPINPK FKYVF+AA S+LKGQSDKE
Sbjct: 546 NIGKDAPIPECPIPGERWKEIRHDNTVTWLAYWSDPINPKLFKYVFLAASSSLKGQSDKE 605
Query: 181 KYEKARLLKDYIQGIRAAYIKDFASKDPTKKQIAVATYLIDKLALRAGNEK 333
KYEKAR+LKDYI+ IR+AY KDF +KD TK QIAVATYLIDKLALRAGNEK
Sbjct: 606 KYEKARMLKDYIENIRSAYTKDFTNKDITKLQIAVATYLIDKLALRAGNEK 656
>ref|XP_002529020.1| DNA topoisomerase type I, putative [Ricinus communis]
gi|223531500|gb|EEF33331.1| DNA topoisomerase type I,
putative [Ricinus communis]
Length = 891
Score = 204 bits (520), Expect = 8e-51
Identities = 97/111 (87%), Positives = 102/111 (91%)
Frame = +1
Query: 1 NIGKDAPIPECPIPGERWKEIRHDNTVTWLAYWNDPINPKEFKYVFMAARSTLKGQSDKE 180
NIGKDAPIPECPIPGE WKE++HDNTVTWLA+WNDPINPKEFKYVF+AA S+LKGQSDKE
Sbjct: 512 NIGKDAPIPECPIPGESWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKE 571
Query: 181 KYEKARLLKDYIQGIRAAYIKDFASKDPTKKQIAVATYLIDKLALRAGNEK 333
KYEKAR LKDYI IRAAY KD SKD TKKQIAVATYLIDKLALRAGNEK
Sbjct: 572 KYEKARKLKDYIHNIRAAYQKDLRSKDITKKQIAVATYLIDKLALRAGNEK 622
Score = 57.0 bits (136), Expect = 3e-06
Identities = 28/36 (77%), Positives = 30/36 (83%)
Frame = +1
Query: 325 NEKLSRETRGGDVAEKVVVYQLANKEVAIIFNHQRT 432
+EKL ET GDVAEKVV+YQ ANKEVAII NHQRT
Sbjct: 723 DEKLYEETEDGDVAEKVVIYQRANKEVAIICNHQRT 758
>dbj|BAG31374.1| topoisomerase I [Ophiorrhiza liukiuensis]
Length = 926
Score = 204 bits (520), Expect = 8e-51
Identities = 99/112 (88%), Positives = 104/112 (92%), Gaps = 1/112 (0%)
Frame = +1
Query: 1 NIGKDAPIPECPIPGERWKEIRHDNTVTWLAYWNDPINPKEFKYVFMAARSTLKGQSDKE 180
NIGKDAPIPECPIPGERWKE+R+DNTVTWLA+WNDPIN KE KYVF+AA STLKGQSDKE
Sbjct: 547 NIGKDAPIPECPIPGERWKEVRNDNTVTWLAFWNDPINQKECKYVFLAASSTLKGQSDKE 606
Query: 181 KYEKARLLKDYIQGIRAAYIKDFA-SKDPTKKQIAVATYLIDKLALRAGNEK 333
KYEKARLLKDYI GIRAAY KDF +KDP KKQIAVATYLIDKLALRAGNEK
Sbjct: 607 KYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQIAVATYLIDKLALRAGNEK 658
>dbj|BAG31373.1| topoisomerase I [Ophiorrhiza pumila]
Length = 926
Score = 204 bits (520), Expect = 8e-51
Identities = 98/112 (87%), Positives = 104/112 (92%), Gaps = 1/112 (0%)
Frame = +1
Query: 1 NIGKDAPIPECPIPGERWKEIRHDNTVTWLAYWNDPINPKEFKYVFMAARSTLKGQSDKE 180
NIGKDAPIPECPIPGERWKE+R+DNTVTWLAYWNDP+N KE KYVF+AA STLKGQSDKE
Sbjct: 547 NIGKDAPIPECPIPGERWKEVRNDNTVTWLAYWNDPVNLKECKYVFLAASSTLKGQSDKE 606
Query: 181 KYEKARLLKDYIQGIRAAYIKDFA-SKDPTKKQIAVATYLIDKLALRAGNEK 333
KYEKARLLKDYI GIRAAY KDF +KDP KKQ+AVATYLIDKLALRAGNEK
Sbjct: 607 KYEKARLLKDYIHGIRAAYTKDFTNNKDPMKKQVAVATYLIDKLALRAGNEK 658
Score = 55.1 bits (131), Expect = 1e-05
Identities = 27/36 (75%), Positives = 31/36 (86%)
Frame = +1
Query: 325 NEKLSRETRGGDVAEKVVVYQLANKEVAIIFNHQRT 432
++ LS+ET+GG VAEKV VYQ ANKEVAII NHQRT
Sbjct: 758 DDMLSKETKGGKVAEKVGVYQRANKEVAIICNHQRT 793