BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00020013
         (1512 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s...   531   e-148
ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s...   526   e-147
gb|EPS62830.1| hypothetical protein M569_11956, partial [Genlise...   514   e-143
gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Mor...   491   e-136
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s...   486   e-134
ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s...   485   e-134
ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citr...   485   e-134
gb|EOY20721.1| DNA-directed RNA polymerase [Theobroma cacao]          482   e-133
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s...   478   e-132
emb|CBI16226.3| unnamed protein product [Vitis vinifera]              470   e-130
ref|XP_002531828.1| DNA-directed RNA polymerase III largest subu...   459   e-126
ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [A...   451   e-124
gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japo...   449   e-123
ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] g...   449   e-123
ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III s...   445   e-122
ref|XP_001757221.1| predicted protein [Physcomitrella patens] gi...   443   e-121
ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III s...   442   e-121
ref|XP_002300065.1| DNA-directed RNA polymerase family protein [...   441   e-121
ref|XP_004294640.1| PREDICTED: DNA-directed RNA polymerase III s...   439   e-120
ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [S...   437   e-120

>ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X1 [Solanum tuberosum]
          Length = 1394

 Score =  531 bits (1369), Expect = e-148
 Identities = 283/402 (70%), Positives = 326/402 (81%), Gaps = 3/402 (0%)
 Frame = -2

Query: 1472 ERQHSEEDQSCLENVASNISGITRQQLIVFLETCISRYHSKKXXXXXXXXXXXXXXXGEP 1293
            E Q+  +D+  LE +A NISGIT++QL VFL TCISRYH K+               GEP
Sbjct: 988  EEQYEGDDRGYLEKIALNISGITKRQLQVFLNTCISRYHLKRLEAGTAIGAIGAQSIGEP 1047

Query: 1292 GTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKRINTPIITTTLQCDNNEIIAKLVKGR 1113
            GTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAK+I TPIITT L    N   A+++K R
Sbjct: 1048 GTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKKITTPIITTKLLSAANLTAARMIKAR 1107

Query: 1112 IEKTLLEQVAKSIKTSQASRLASIVITLDMKRIQGAQLSVDAYTVKESILQTPKMKLKEQ 933
            IEKTLL QVAKS+K   ASRLASI I+LDM+ IQ +QL +DAYTVK+SILQT K+KLKE 
Sbjct: 1108 IEKTLLGQVAKSVKIVLASRLASIAISLDMETIQVSQLCIDAYTVKQSILQTSKIKLKEH 1167

Query: 932  QVRVLNPRKLEVILQADRNKLQFELHTLKNKISKVVVKGINSVERAIIINEAKEKDPSGN 753
            Q++VLNPRKLEV  QA+++KL FELH LKNK+  VVVKGI +V+RA++ N+ ++KD   +
Sbjct: 1168 QIKVLNPRKLEVFPQANKDKLHFELHRLKNKLPAVVVKGITTVQRAVV-NKEQQKDRKND 1226

Query: 752  KR---LKLLVEGTGLLSVMGIDGVDGCKTTSNHIIEVQQTLGIEAARKKIIDEIQYTMSS 582
             +    +LLVEGTGLL+VMGI+GVDG  T SNHI+EVQ TLGIEAAR  IIDEI YTMSS
Sbjct: 1227 VKGETYELLVEGTGLLAVMGIEGVDGRYTKSNHIMEVQNTLGIEAARVSIIDEINYTMSS 1286

Query: 581  HGMTIDIRHMMLLADLMTFKGEVLGITRHGVQKMKDSVLMLASFEKTADHLFNASVNGRV 402
            HGMTID+RHMMLLADLMT+KGEVLGITRHGVQKMKDSVLMLASFEKT DHLFNASVNGR 
Sbjct: 1287 HGMTIDLRHMMLLADLMTYKGEVLGITRHGVQKMKDSVLMLASFEKTTDHLFNASVNGRD 1346

Query: 401  DRIEGVSECIIMGIPMQIGTGMLKVRQSVQPVELNYGPDPII 276
            D+IEGV+ECIIMGIPM IGTGM K+RQ V+ VELNY PDPII
Sbjct: 1347 DKIEGVTECIIMGIPMTIGTGMFKLRQRVEQVELNYQPDPII 1388


>ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Solanum
            lycopersicum]
          Length = 1390

 Score =  526 bits (1355), Expect = e-147
 Identities = 279/402 (69%), Positives = 324/402 (80%), Gaps = 3/402 (0%)
 Frame = -2

Query: 1472 ERQHSEEDQSCLENVASNISGITRQQLIVFLETCISRYHSKKXXXXXXXXXXXXXXXGEP 1293
            E Q+  +D+  LE +  NISGIT++QL VFL TCISRYH K+               GEP
Sbjct: 988  EEQYEGDDRGYLEKIVLNISGITKKQLQVFLNTCISRYHLKRLEAGTAIGAIGAQSIGEP 1047

Query: 1292 GTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKRINTPIITTTLQCDNNEIIAKLVKGR 1113
            GTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAK+I TPIIT  L    N   A+++K R
Sbjct: 1048 GTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKKITTPIITAKLLSAGNLTAARMIKAR 1107

Query: 1112 IEKTLLEQVAKSIKTSQASRLASIVITLDMKRIQGAQLSVDAYTVKESILQTPKMKLKEQ 933
            IEKTLL QVAKS+K   ASRLASI I+LDM+ IQ +QL +DAYTVK+SILQT K+KLKE 
Sbjct: 1108 IEKTLLGQVAKSVKIVLASRLASIAISLDMETIQVSQLCIDAYTVKQSILQTSKIKLKEH 1167

Query: 932  QVRVLNPRKLEVILQADRNKLQFELHTLKNKISKVVVKGINSVERAIIINEAKEKDPSGN 753
            Q++VLNPRKLEV  QA+++KL FELH LKNK+  VVVKGI +V+RA++ N+ ++KD   +
Sbjct: 1168 QIKVLNPRKLEVFPQANKDKLHFELHRLKNKLPAVVVKGITTVQRAVV-NKEQQKDRKND 1226

Query: 752  KR---LKLLVEGTGLLSVMGIDGVDGCKTTSNHIIEVQQTLGIEAARKKIIDEIQYTMSS 582
             +    +LLVEGTGLL+VMGI+GVDG  T SNHI+EVQ TLGIEAAR  IIDEI YTMSS
Sbjct: 1227 VKGETYELLVEGTGLLAVMGIEGVDGRYTKSNHIMEVQHTLGIEAARVSIIDEINYTMSS 1286

Query: 581  HGMTIDIRHMMLLADLMTFKGEVLGITRHGVQKMKDSVLMLASFEKTADHLFNASVNGRV 402
            HGMTID+RHMMLLADLMT+KGEVLGITRHGVQKMKDSVLMLASFEKT DHLFNASVNGR 
Sbjct: 1287 HGMTIDLRHMMLLADLMTYKGEVLGITRHGVQKMKDSVLMLASFEKTTDHLFNASVNGRD 1346

Query: 401  DRIEGVSECIIMGIPMQIGTGMLKVRQSVQPVELNYGPDPII 276
            D+IEGV+ECIIMGIPM IGTGM K+RQ V+ VELNY PDP++
Sbjct: 1347 DKIEGVTECIIMGIPMTIGTGMFKLRQRVEHVELNYQPDPMM 1388


>gb|EPS62830.1| hypothetical protein M569_11956, partial [Genlisea aurea]
          Length = 1368

 Score =  514 bits (1324), Expect = e-143
 Identities = 269/395 (68%), Positives = 321/395 (81%)
 Frame = -2

Query: 1505 YPSSILVLKSNERQHSEEDQSCLENVASNISGITRQQLIVFLETCISRYHSKKXXXXXXX 1326
            YP+ +L  K N    S +D+S +++V S+ SGIT+QQL VFL  C +RYH KK       
Sbjct: 974  YPTGMLSEKLNSENISLQDKSYVQSVVSSTSGITQQQLEVFLNMCFARYHPKKIECGTAV 1033

Query: 1325 XXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKRINTPIITTTLQCDN 1146
                    GEPGTQMTLKTFHFAGVASMNVTLGVPRI+EII+AAK+I TP+ITT LQ  +
Sbjct: 1034 GAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIREIIDAAKKIKTPVITTELQRKD 1093

Query: 1145 NEIIAKLVKGRIEKTLLEQVAKSIKTSQASRLASIVITLDMKRIQGAQLSVDAYTVKESI 966
              I A++VKGRIEKTLL ++AKS+K S+ +R ASIVI LD K I+ AQL +DAYTVKESI
Sbjct: 1094 CGITARIVKGRIEKTLLGEIAKSMKVSEMTRTASIVIKLDTKVIEAAQLFIDAYTVKESI 1153

Query: 965  LQTPKMKLKEQQVRVLNPRKLEVILQADRNKLQFELHTLKNKISKVVVKGINSVERAIII 786
            L TPKMKLKEQQ+RVLN +KL V L+A+R+KL+FE   L+NK+  VVVKGI  VERAII+
Sbjct: 1154 LLTPKMKLKEQQIRVLNRQKLTVSLEAERSKLEFESWALQNKLKDVVVKGIKQVERAIIV 1213

Query: 785  NEAKEKDPSGNKRLKLLVEGTGLLSVMGIDGVDGCKTTSNHIIEVQQTLGIEAARKKIID 606
            +EA  KDP+  K+LKL+VEGTG LSV+GI GVD   T SNHI+EV Q LGIE+AR++IID
Sbjct: 1214 DEANGKDPNQRKKLKLVVEGTGFLSVLGIQGVDARNTKSNHIMEVFQVLGIESARRQIID 1273

Query: 605  EIQYTMSSHGMTIDIRHMMLLADLMTFKGEVLGITRHGVQKMKDSVLMLASFEKTADHLF 426
            EIQYTMS HGMTIDIRHMMLLADLMTFKGEVLGITR+GV+KM+DSVLMLASFE+TADHLF
Sbjct: 1274 EIQYTMSGHGMTIDIRHMMLLADLMTFKGEVLGITRYGVRKMRDSVLMLASFERTADHLF 1333

Query: 425  NASVNGRVDRIEGVSECIIMGIPMQIGTGMLKVRQ 321
            NA VNGRVDRIEGVSECI++GIPM+ GTGM+K++Q
Sbjct: 1334 NAPVNGRVDRIEGVSECIMLGIPMRTGTGMMKIKQ 1368


>gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Morus notabilis]
          Length = 1179

 Score =  491 bits (1264), Expect = e-136
 Identities = 263/404 (65%), Positives = 316/404 (78%), Gaps = 2/404 (0%)
 Frame = -2

Query: 1481 KSNERQHSEEDQSCLENVASNISGITRQQLIVFLETCISRYHSKKXXXXXXXXXXXXXXX 1302
            +S E     E+ +  +N+   +SG T +QL VFL+TCISRYHSKK               
Sbjct: 775  ESTEGHAKMENSATTKNIVLQLSGATARQLEVFLDTCISRYHSKKIEAGTAIGAIGAQSI 834

Query: 1301 GEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKRINTPIITTTLQCDNNEIIAKLV 1122
            GEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIIN AK+I+TPIIT  L+CDNN   A++V
Sbjct: 835  GEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKKISTPIITAILECDNNVNFARIV 894

Query: 1121 KGRIEKTLLEQVAKSIKTSQASRLASIVITLDMKRIQGAQLSVDAYTVKESILQTPKMKL 942
            +GRIEK  L QVAKSIKT   SR+AS+VITLDM+RIQ A LS+DA  V++SILQTP++KL
Sbjct: 895  RGRIEKISLGQVAKSIKTVMTSRVASVVITLDMERIQDALLSIDANVVRDSILQTPRIKL 954

Query: 941  KEQQVRVLNPRKLEVI-LQADRNKLQFELHTLKNKISKVVVKGINSVERAIIINEAKEKD 765
            K++ +RVL+ +KLE++  +++R+KL   L  L   +  ++VKGI +VERA+I +E K+K 
Sbjct: 955  KKEHIRVLDFKKLEILPYESNRSKLYHHLQFLAKMLQNILVKGIKTVERAVISSE-KDKK 1013

Query: 764  PSGNKRLKLLVEGTGLLSVMGIDGVDGCKTTSNHIIEVQQTLGIEAARKKIIDEIQYTMS 585
               +K+ KLLVEGTGLL VMG +GVDG  T +NHIIEVQQTLGIEAAR  IIDEI+YTM 
Sbjct: 1014 TDISKKYKLLVEGTGLLGVMGTEGVDGRNTKTNHIIEVQQTLGIEAARTCIIDEIEYTMK 1073

Query: 584  SHGMTIDIRHMMLLADLMTFKGEVLGITRHGVQKMKDSVLMLASFEKTADHLFNASVNGR 405
            SHGM+ID RHMMLLAD+MT +GEVLGITR G+QKM  SVLMLASFEKTADHLFNASVNGR
Sbjct: 1074 SHGMSIDTRHMMLLADVMTSRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVNGR 1133

Query: 404  VDRIEGVSECIIMGIPMQIGTGMLKVRQSVQ-PVELNYGPDPII 276
             D+IEGVSECIIMGIPMQIGTGM+KVRQ V  P  L+YGP PI+
Sbjct: 1134 EDKIEGVSECIIMGIPMQIGTGMIKVRQRVDVPPMLSYGPKPIL 1177


>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
            vinifera]
          Length = 1383

 Score =  486 bits (1251), Expect = e-134
 Identities = 266/395 (67%), Positives = 309/395 (78%), Gaps = 1/395 (0%)
 Frame = -2

Query: 1457 EEDQSCLENVASNISGITRQQLIVFLETCISRYHSKKXXXXXXXXXXXXXXXGEPGTQMT 1278
            EE+    E  A NISGIT +QL VFL+TCISRY  K+               GEPGTQMT
Sbjct: 995  EENLDIQEKFAKNISGITSKQLQVFLDTCISRYQLKRIEAGTAIGAIGAHSIGEPGTQMT 1054

Query: 1277 LKTFHFAGVASMNVTLGVPRIKEIINAAKRINTPIITTTLQCDNNEIIAKLVKGRIEKTL 1098
            LKTFHFAGVASMNVTLGVPRIKEIIN AKRI+TPIIT  L+C+NN   A++VKGRIE+T 
Sbjct: 1055 LKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIITAALECNNNVKTARMVKGRIERTT 1114

Query: 1097 LEQVAKSIKTSQASRLASIVITLDMKRIQGAQLSVDAYTVKESILQTPKMKLKEQQVRVL 918
            L QVAKSIK    SRLA I + LDM+ IQ +QLS+D+  V+ESIL+  ++KLK+Q ++VL
Sbjct: 1115 LGQVAKSIKIVLTSRLALIAVALDMEGIQASQLSIDSNIVRESILRNRRIKLKQQHIKVL 1174

Query: 917  NPRKLEVILQADRNKLQFELHTLKNKISKVVVKGINSVERAIIINEAKEKDPSGNKRLKL 738
            +  KLEV  Q DR+ + FELH LKN +  VVVKGI +VERA+I  + K K         L
Sbjct: 1175 DAGKLEVHPQGDRSTIHFELHALKNLLPTVVVKGIETVERAVINKDNKVK-------YNL 1227

Query: 737  LVEGTGLLSVMGIDGVDGCKTTSNHIIEVQQTLGIEAARKKIIDEIQYTMSSHGMTIDIR 558
            LVEGTGL +VMG +GV G +TTSNHIIEVQQTLGIEAARK II+EIQYTM+SHGM+IDIR
Sbjct: 1228 LVEGTGLQTVMGTEGVIGRETTSNHIIEVQQTLGIEAARKCIINEIQYTMASHGMSIDIR 1287

Query: 557  HMMLLADLMTFKGEVLGITRHGVQKMKDSVLMLASFEKTADHLFNASVNGRVDRIEGVSE 378
            HMMLLADLMTF+GEVLGITR G+QKM  SVLMLASFEKTADHLFNASV+GR D+IEGVSE
Sbjct: 1288 HMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVSGRDDKIEGVSE 1347

Query: 377  CIIMGIPMQIGTGMLKVRQSVQPV-ELNYGPDPII 276
            CIIMGIPMQ+GTG+LKVRQ +Q V EL+YG DPII
Sbjct: 1348 CIIMGIPMQLGTGILKVRQRLQQVPELSYGLDPII 1382


>ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X1 [Citrus sinensis] gi|568870034|ref|XP_006488217.1|
            PREDICTED: DNA-directed RNA polymerase III subunit
            rpc1-like isoform X2 [Citrus sinensis]
          Length = 1404

 Score =  485 bits (1249), Expect = e-134
 Identities = 260/400 (65%), Positives = 307/400 (76%), Gaps = 6/400 (1%)
 Frame = -2

Query: 1457 EEDQSCLENVASNISGITRQQLIVFLETCISRYHSKKXXXXXXXXXXXXXXXGEPGTQMT 1278
            ++    LE V    SGIT +QL VF++TC SRYH K+               GEPGTQMT
Sbjct: 1004 DDKSQILEEVTHKTSGITEKQLEVFIQTCFSRYHVKRVEAGTAIGAIGAQSIGEPGTQMT 1063

Query: 1277 LKTFHFAGVASMNVTLGVPRIKEIINAAKRINTPIITTTLQCDNNEIIAKLVKGRIEKTL 1098
            LKTFHFAGVASMN+T GVPRIKEIIN AKRI+TPIIT  L+C++NE  A++VKGRIEKTL
Sbjct: 1064 LKTFHFAGVASMNITQGVPRIKEIINGAKRISTPIITAELECNDNENAARVVKGRIEKTL 1123

Query: 1097 LEQVAKSIKTSQASRLASIVITLDMKRIQGAQLSVDAYTVKESILQTPKMKLKEQQVRVL 918
            L QVAKSIK    SRLASIVI LDM+ IQ A L ++A  VKESI+QTPK+KLK+Q ++VL
Sbjct: 1124 LGQVAKSIKIVMTSRLASIVIALDMETIQDAHLCINADIVKESIVQTPKIKLKQQHIKVL 1183

Query: 917  NPRKLEVILQADRNKLQFELHTLKNKISKVVVKGINSVERAIIINEAKEK----DPSGNK 750
            + RKLE+    D++K+ FEL++LKN +  V+VKGI +VER +I  + KEK    +    K
Sbjct: 1184 DFRKLEIFPPVDKSKIHFELYSLKNVLPMVIVKGIKTVERVVIAEKEKEKRKVKENGEKK 1243

Query: 749  RLKLLVEGTGLLSVMGIDGVDGCKTTSNHIIEVQQTLGIEAARKKIIDEIQYTMSSHGMT 570
            + +LLVEGTGL +VMG +G+DGCKT SNHI EVQQTLGIEAAR  IIDEI  TM +HGM+
Sbjct: 1244 KYRLLVEGTGLQAVMGAEGIDGCKTKSNHIFEVQQTLGIEAARICIIDEINETMKAHGMS 1303

Query: 569  IDIRHMMLLADLMTFKGEVLGITRHGVQKMKDSVLMLASFEKTADHLFNASVNGRVDRIE 390
            ID RHMMLLADLMTF+GEVLGITR G+QKM  SVLMLASFEKTADHLFNASVNGR DRIE
Sbjct: 1304 IDKRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDRIE 1363

Query: 389  GVSECIIMGIPMQIGTGMLKVRQ-SVQPVELNYG-PDPII 276
            GVSECIIMGIPM +GTG+LK+RQ    P  L YG PDPI+
Sbjct: 1364 GVSECIIMGIPMPLGTGILKIRQRDAVPPMLKYGAPDPIM 1403


>ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citrus clementina]
            gi|557526635|gb|ESR37941.1| hypothetical protein
            CICLE_v10027681mg [Citrus clementina]
          Length = 1397

 Score =  485 bits (1249), Expect = e-134
 Identities = 260/400 (65%), Positives = 307/400 (76%), Gaps = 6/400 (1%)
 Frame = -2

Query: 1457 EEDQSCLENVASNISGITRQQLIVFLETCISRYHSKKXXXXXXXXXXXXXXXGEPGTQMT 1278
            ++    LE V    SGIT +QL VF++TC SRYH K+               GEPGTQMT
Sbjct: 997  DDKSQILEEVTHKTSGITEKQLEVFIQTCFSRYHVKRVEAGTAIGAIGAQSIGEPGTQMT 1056

Query: 1277 LKTFHFAGVASMNVTLGVPRIKEIINAAKRINTPIITTTLQCDNNEIIAKLVKGRIEKTL 1098
            LKTFHFAGVASMN+T GVPRIKEIIN AKRI+TPIIT  L+C++NE  A++VKGRIEKTL
Sbjct: 1057 LKTFHFAGVASMNITQGVPRIKEIINGAKRISTPIITAELECNDNENAARVVKGRIEKTL 1116

Query: 1097 LEQVAKSIKTSQASRLASIVITLDMKRIQGAQLSVDAYTVKESILQTPKMKLKEQQVRVL 918
            L QVAKSIK    SRLASIVI LDM+ IQ A L ++A  VKESI+QTPK+KLK+Q ++VL
Sbjct: 1117 LGQVAKSIKIVMTSRLASIVIALDMETIQDAHLCINADIVKESIVQTPKIKLKQQHIKVL 1176

Query: 917  NPRKLEVILQADRNKLQFELHTLKNKISKVVVKGINSVERAIIINEAKEK----DPSGNK 750
            + RKLE+    D++K+ FEL++LKN +  V+VKGI +VER +I  + KEK    +    K
Sbjct: 1177 DFRKLEIFPPVDKSKIHFELYSLKNVLPMVIVKGIKTVERVVIAEKEKEKRKVKENGEKK 1236

Query: 749  RLKLLVEGTGLLSVMGIDGVDGCKTTSNHIIEVQQTLGIEAARKKIIDEIQYTMSSHGMT 570
            + +LLVEGTGL +VMG +G+DGCKT SNHI EVQQTLGIEAAR  IIDEI  TM +HGM+
Sbjct: 1237 KYRLLVEGTGLQAVMGAEGIDGCKTKSNHIFEVQQTLGIEAARICIIDEINETMKAHGMS 1296

Query: 569  IDIRHMMLLADLMTFKGEVLGITRHGVQKMKDSVLMLASFEKTADHLFNASVNGRVDRIE 390
            ID RHMMLLADLMTF+GEVLGITR G+QKM  SVLMLASFEKTADHLFNASVNGR DRIE
Sbjct: 1297 IDKRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDRIE 1356

Query: 389  GVSECIIMGIPMQIGTGMLKVRQ-SVQPVELNYG-PDPII 276
            GVSECIIMGIPM +GTG+LK+RQ    P  L YG PDPI+
Sbjct: 1357 GVSECIIMGIPMPLGTGILKIRQRDAVPPMLKYGAPDPIM 1396


>gb|EOY20721.1| DNA-directed RNA polymerase [Theobroma cacao]
          Length = 1395

 Score =  482 bits (1241), Expect = e-133
 Identities = 263/411 (63%), Positives = 316/411 (76%), Gaps = 5/411 (1%)
 Frame = -2

Query: 1493 ILVLKSNERQHSEEDQSCLENVASNISGITRQQLIVFLETCISRYHSKKXXXXXXXXXXX 1314
            ++ L +N  Q SE     LE V   ISGI+ +QL VF+ TCISRY SK            
Sbjct: 988  VMKLVNNCAQKSE----ILEKVGHKISGISDRQLEVFVSTCISRYRSKVIEAGTAIGAIG 1043

Query: 1313 XXXXGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKRINTPIITTTLQCDNNEII 1134
                GEPGTQMTLKTFHFAGVASMN+T GVPRIKEIINAAKRI+TP+IT  L+ D+N  I
Sbjct: 1044 AQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINAAKRISTPVITAELEFDDNPNI 1103

Query: 1133 AKLVKGRIEKTLLEQVAKSIKTSQASRLASIVITLDMKRIQGAQLSVDAYTVKESILQTP 954
            A++VKGRIEKT+L QVAKSIK    SR AS+VITLDM+ I  A+L +DA  VKESILQTP
Sbjct: 1104 AQIVKGRIEKTVLGQVAKSIKIVITSRSASVVITLDMEIILDAELYIDANIVKESILQTP 1163

Query: 953  KMKLKEQQVRVLNPRKLEVILQADRNKLQFELHTLKNKISKVVVKGINSVERAIIINEAK 774
            K+KLKEQ V+VL+ RKLEV+  ADR+++ FELH+LKN +  VVVKGI +VER ++ ++ K
Sbjct: 1164 KIKLKEQHVKVLDGRKLEVVPPADRSQIHFELHSLKNLLPLVVVKGIKTVERTVVYDKNK 1223

Query: 773  E----KDPSGNKRLKLLVEGTGLLSVMGIDGVDGCKTTSNHIIEVQQTLGIEAARKKIID 606
            E    K+    K  +LLVEGTGL +VMGI+G+DG +T SNH++E++Q LGIEAARK IID
Sbjct: 1224 EKKNQKEEETTKHFQLLVEGTGLQAVMGIEGIDGRRTWSNHVMEMEQILGIEAARKCIID 1283

Query: 605  EIQYTMSSHGMTIDIRHMMLLADLMTFKGEVLGITRHGVQKMKDSVLMLASFEKTADHLF 426
            EI  TM  HGMTID RHMMLLAD+MTF+GEVLGITR G+QKM  S+LMLASFE+TADHLF
Sbjct: 1284 EIAQTMEHHGMTIDRRHMMLLADVMTFRGEVLGITRFGIQKMDKSILMLASFERTADHLF 1343

Query: 425  NASVNGRVDRIEGVSECIIMGIPMQIGTGMLKVRQSVQPVE-LNYGPDPII 276
            NA+VNGR D+IEGV+ECIIMGIPMQIGTG+LKV Q V P   L YGPDP++
Sbjct: 1344 NAAVNGRDDKIEGVTECIIMGIPMQIGTGILKVIQRVDPPPMLRYGPDPVL 1394


>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Cucumis
            sativus]
          Length = 1400

 Score =  478 bits (1230), Expect = e-132
 Identities = 262/399 (65%), Positives = 307/399 (76%), Gaps = 4/399 (1%)
 Frame = -2

Query: 1460 SEEDQSCLEN-VASNISGITRQQLIVFLETCISRYHSKKXXXXXXXXXXXXXXXGEPGTQ 1284
            S+ D   + N V  NI+G+T +QL VFL+TC+SRYH+KK               GEPGTQ
Sbjct: 1004 SDNDNIVIRNKVVQNIAGVTHRQLQVFLDTCLSRYHTKKIEAGTAIGAIGAQSIGEPGTQ 1063

Query: 1283 MTLKTFHFAGVASMNVTLGVPRIKEIINAAKRINTPIITTTLQCDNNEIIAKLVKGRIEK 1104
            MTLKTFHFAGVASMNVTLGVPRIKEIIN AKRI+TPI+T  L  D+N  IA++VK RIEK
Sbjct: 1064 MTLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIVTAALTHDDNVNIARMVKARIEK 1123

Query: 1103 TLLEQVAKSIKTSQASRLASIVITLDMKRIQGAQLSVDAYTVKESILQTPKMKLKEQQVR 924
            T L Q+AK I+   +SR A I I LDM++I+ A+L VDA  VK++IL TPK+KLK + + 
Sbjct: 1124 TNLGQIAKCIQIVMSSRSALIEIKLDMEKIRDAELYVDANVVKQAILVTPKLKLKHEHIN 1183

Query: 923  VLNPRKLEVILQ-ADRNKLQFELHTLKNKISKVVVKGINSVERAIIINEAKEKDPSGN-K 750
            VL+ RKL V+ Q ADRNKL F LH LKN +  VVVKGI +V RA+I    +EKD + N K
Sbjct: 1184 VLDDRKLRVLPQDADRNKLHFNLHFLKNMLPGVVVKGIKTVGRAVI---KEEKDKARNAK 1240

Query: 749  RLKLLVEGTGLLSVMGIDGVDGCKTTSNHIIEVQQTLGIEAARKKIIDEIQYTMSSHGMT 570
            +  LLVEGTGL +VMG +GVDGC T SNHIIEVQQ LGIEAARK II+EI+YTM SHGM+
Sbjct: 1241 KFSLLVEGTGLQAVMGTEGVDGCNTKSNHIIEVQQVLGIEAARKCIIEEIKYTMESHGMS 1300

Query: 569  IDIRHMMLLADLMTFKGEVLGITRHGVQKMKDSVLMLASFEKTADHLFNASVNGRVDRIE 390
            IDIRHMMLL DLMTF+GEVLGITR G+QKM  SVLMLASFEKTADHLFNASVNGR D+IE
Sbjct: 1301 IDIRHMMLLGDLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDKIE 1360

Query: 389  GVSECIIMGIPMQIGTGMLKVRQSVQ-PVELNYGPDPII 276
            GVSEC+IMGIPM +GTGMLKVRQ V  P +L YGP  I+
Sbjct: 1361 GVSECVIMGIPMPLGTGMLKVRQRVSVPQQLPYGPPAIL 1399


>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
          Length = 1819

 Score =  470 bits (1210), Expect = e-130
 Identities = 256/378 (67%), Positives = 300/378 (79%), Gaps = 1/378 (0%)
 Frame = -2

Query: 1406 TRQQLIVFLETCISRYHSKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLG 1227
            +R++L VFL+TCISRY  K+               GEPGTQMTLKTFHFAGVASMNVTLG
Sbjct: 1448 SRKRLGVFLDTCISRYQLKRIEAGTAIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLG 1507

Query: 1226 VPRIKEIINAAKRINTPIITTTLQCDNNEIIAKLVKGRIEKTLLEQVAKSIKTSQASRLA 1047
            VPRIKEIIN AKRI+TPIIT  L+C+NN   A++VKGRIE+T L QVAKSIK    SRLA
Sbjct: 1508 VPRIKEIINGAKRISTPIITAALECNNNVKTARMVKGRIERTTLGQVAKSIKIVLTSRLA 1567

Query: 1046 SIVITLDMKRIQGAQLSVDAYTVKESILQTPKMKLKEQQVRVLNPRKLEVILQADRNKLQ 867
             I + LDM+ IQ +QLS+D+  V+ESIL+  ++KLK+Q ++VL+  KLEV  Q DR+ + 
Sbjct: 1568 LIAVALDMEGIQASQLSIDSNIVRESILRNRRIKLKQQHIKVLDAGKLEVHPQGDRSTIH 1627

Query: 866  FELHTLKNKISKVVVKGINSVERAIIINEAKEKDPSGNKRLKLLVEGTGLLSVMGIDGVD 687
            FELH LKN +  VVVKGI +VERA+I  + K K         LLVEGTGL +VMG +GV 
Sbjct: 1628 FELHALKNLLPTVVVKGIETVERAVINKDNKVK-------YNLLVEGTGLQTVMGTEGVI 1680

Query: 686  GCKTTSNHIIEVQQTLGIEAARKKIIDEIQYTMSSHGMTIDIRHMMLLADLMTFKGEVLG 507
            G +TTSNHIIEVQQTLGIEAARK II+EIQYTM+SHGM+IDIRHMMLLADLMTF+GEVLG
Sbjct: 1681 GRETTSNHIIEVQQTLGIEAARKCIINEIQYTMASHGMSIDIRHMMLLADLMTFRGEVLG 1740

Query: 506  ITRHGVQKMKDSVLMLASFEKTADHLFNASVNGRVDRIEGVSECIIMGIPMQIGTGMLKV 327
            ITR G+QKM  SVLMLASFEKTADHLFNASV+GR D+IEGVSECIIMGIPMQ+GTG+LKV
Sbjct: 1741 ITRFGIQKMDKSVLMLASFEKTADHLFNASVSGRDDKIEGVSECIIMGIPMQLGTGILKV 1800

Query: 326  RQSVQPV-ELNYGPDPII 276
            RQ +Q V EL+YG DPII
Sbjct: 1801 RQRLQQVPELSYGLDPII 1818


>ref|XP_002531828.1| DNA-directed RNA polymerase III largest subunit, putative [Ricinus
            communis] gi|223528524|gb|EEF30548.1| DNA-directed RNA
            polymerase III largest subunit, putative [Ricinus
            communis]
          Length = 1383

 Score =  459 bits (1181), Expect = e-126
 Identities = 248/393 (63%), Positives = 299/393 (76%), Gaps = 5/393 (1%)
 Frame = -2

Query: 1439 LENVASNISGITRQQLIVFLETCISRYHSKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHF 1260
            +E +A  I G++ +Q+ VF++TCI+RY  K+               GEPGTQMTLKTFHF
Sbjct: 992  IERLAHKIFGVSERQIEVFVKTCINRYLWKRVEPGTAIGAIGAQSIGEPGTQMTLKTFHF 1051

Query: 1259 AGVASMNVTLGVPRIKEIINAAKRINTPIITTTLQCDNNEIIAKLVKGRIEKTLLEQVAK 1080
            AGVASMN+T GVPRIKEIIN AK+I+TPIIT  L+ + N   A++ KGRI+KT+L QVAK
Sbjct: 1052 AGVASMNITQGVPRIKEIINGAKKISTPIITAELEQNTNVTAARIAKGRIQKTVLGQVAK 1111

Query: 1079 SIKTSQASRLASIVITLDMKRIQGAQLSVDAYTVKESILQTPKMKLKEQQVRVLNPRKLE 900
            SIK    SR AS+VITLDMK IQ AQLS+DA  VKE+IL+TP++KLK Q ++VL+ RKLE
Sbjct: 1112 SIKIVMTSRSASVVITLDMKTIQNAQLSLDANIVKEAILRTPRIKLKPQHIKVLDTRKLE 1171

Query: 899  VILQADRNKLQFELHTLKNKISKVVVKGINSVERAIIINEAKEKDPSGNKR----LKLLV 732
            VI   DR ++ FELH LKN +  ++V+GI +VERA+I    K+ D   N +      +LV
Sbjct: 1172 VIPLGDRERVHFELHNLKNLLPSIIVQGIKTVERAVIAQ--KKHDGKANDQELPTYNMLV 1229

Query: 731  EGTGLLSVMGIDGVDGCKTTSNHIIEVQQTLGIEAARKKIIDEIQYTMSSHGMTIDIRHM 552
            EG GL  VMG +GVDGCKTTSNH++EVQ+ LGIEAARK IIDEI  TM  HGM+IDIRHM
Sbjct: 1230 EGMGLDLVMGTEGVDGCKTTSNHVMEVQKFLGIEAARKCIIDEINQTMEHHGMSIDIRHM 1289

Query: 551  MLLADLMTFKGEVLGITRHGVQKMKDSVLMLASFEKTADHLFNASVNGRVDRIEGVSECI 372
            MLL DLMTFKGEVLGITR G+QKM  SVLMLASFEKTADHL++A+V GR D+IEGVSECI
Sbjct: 1290 MLLGDLMTFKGEVLGITRFGIQKMDKSVLMLASFEKTADHLYHAAVFGRDDKIEGVSECI 1349

Query: 371  IMGIPMQIGTGMLKVRQSVQPVE-LNYGPDPII 276
            IMGIPMQIGTG+LKV+Q V P   LNYG D II
Sbjct: 1350 IMGIPMQIGTGILKVQQRVDPPPVLNYGSDSII 1382


>ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [Amborella trichopoda]
            gi|548832896|gb|ERM95665.1| hypothetical protein
            AMTR_s00023p00196820 [Amborella trichopoda]
          Length = 1383

 Score =  451 bits (1161), Expect = e-124
 Identities = 249/401 (62%), Positives = 304/401 (75%), Gaps = 6/401 (1%)
 Frame = -2

Query: 1457 EEDQSCLENVASNISGITRQQLIVFLETCISRYHSKKXXXXXXXXXXXXXXXGEPGTQMT 1278
            +E  S LE+VA+NISGI+RQQL VFLETCISRYH K+               GEPGTQMT
Sbjct: 991  KEKFSGLEHVAANISGISRQQLRVFLETCISRYHLKRIEAGTAIGAIGAQSIGEPGTQMT 1050

Query: 1277 LKTFHFAGVASMNVTLGVPRIKEIINAAKRINTPIITTTLQCDNNEIIAKLVKGRIEKTL 1098
            LKTFHFAGVASMN+TLGVPRIKEI+ A+K+I+TPIIT TL CDN+E  A++VKGRIEKTL
Sbjct: 1051 LKTFHFAGVASMNITLGVPRIKEILGASKKISTPIITATLVCDNDEKSARIVKGRIEKTL 1110

Query: 1097 LEQVAKSIKTSQASRLASIVITLDMKRIQGAQLSVDAYTVKESILQTPKMKLKEQQVRVL 918
            L +VAK++K S     ASI ITLDMKRI+  Q+++DA TV +SI +  K K+   +++V 
Sbjct: 1111 LGEVAKTVKISVTPTQASINITLDMKRIEALQMAIDAKTVADSISENLKAKVSRTKLKVK 1170

Query: 917  N----PRKLEVIL-QADRNKLQFELHTLKNKISKVVVKGINSVERAIIINEAKEKDPSGN 753
                 P KL+++L +  R ++ + LH L++ + K++VKGI +VERA+I N  K K     
Sbjct: 1171 PTFTLPDKLKILLPEIGRKEVLYSLHLLQSLLPKIIVKGIPTVERAVI-NNVKGK----- 1224

Query: 752  KRLKLLVEGTGLLSVMGIDGVDGCKTTSNHIIEVQQTLGIEAARKKIIDEIQYTMSSHGM 573
              L LLVEGT LL+VMG  GVDG  TTSNHI+EV+ TLGIEAARK IIDEIQYTM SHGM
Sbjct: 1225 --LNLLVEGTNLLAVMGTPGVDGRNTTSNHIVEVEGTLGIEAARKSIIDEIQYTMKSHGM 1282

Query: 572  TIDIRHMMLLADLMTFKGEVLGITRHGVQKMKDSVLMLASFEKTADHLFNASVNGRVDRI 393
            +ID+RHMMLLADLMTF+G VLGI R G+ KMK+SVLMLASFE+TAD LF+A+  GRVD I
Sbjct: 1283 SIDLRHMMLLADLMTFRGLVLGIQRFGITKMKESVLMLASFERTADILFDATTRGRVDTI 1342

Query: 392  EGVSECIIMGIPMQIGTGMLKVRQ-SVQPVELNYGPDPIIC 273
             GVSECIIMG+PMQIGTG+L V+Q   Q  +L YGPDPIIC
Sbjct: 1343 AGVSECIIMGVPMQIGTGILSVQQRPEQLAKLTYGPDPIIC 1383


>gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japonica Group]
          Length = 1321

 Score =  449 bits (1155), Expect = e-123
 Identities = 245/414 (59%), Positives = 305/414 (73%), Gaps = 2/414 (0%)
 Frame = -2

Query: 1511 KKYPSSILVLKSNERQHSEEDQSCLENVASNISGITRQQLIVFLETCISRYHSKKXXXXX 1332
            K   S+   L  +E    E   S  E++A+NISGI+ +QL VFL+TC+SRYH KK     
Sbjct: 911  KLLKSTRRALLLDEDHVGERHSSFEESIAANISGISVKQLQVFLDTCLSRYHLKKIEAGA 970

Query: 1331 XXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKRINTPIITTTLQC 1152
                      GEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAK+I+TPIIT  L  
Sbjct: 971  SIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKKISTPIITAELLS 1030

Query: 1151 DNNEIIAKLVKGRIEKTLLEQVAKSIKTSQASRLASIVITLDMKRIQGAQLSVDAYTVKE 972
            + + + A++VKG +EK +L +VA++IK    S   ++V+ LDM+RI+   + + A +V+ 
Sbjct: 1031 EKDVLSARIVKGSMEKAVLGEVAEAIKIVLKSSQPNLVVKLDMQRIEALHMGISADSVQL 1090

Query: 971  SILQTPKMKLKEQQVRVLNPRKLEVILQA-DRNKLQFELHTLKNKISKVVVKGINSVERA 795
            SIL  PK+KLK + VRV++  KL +     D++KL +ELH LK+ + KV+VKGI +VERA
Sbjct: 1091 SILNHPKIKLKSEHVRVIDKSKLRIYPAGIDKSKLLYELHHLKSMLPKVIVKGIPTVERA 1150

Query: 794  IIINEAKEKDPSGNKRLKLLVEGTGLLSVMGIDGVDGCKTTSNHIIEVQQTLGIEAARKK 615
            +I    +E D    KR KLLVEGT LL+VMG  GVD  KT SNHI+EV +TLGIEAAR+ 
Sbjct: 1151 VISETGEEND----KRYKLLVEGTNLLAVMGTPGVDAMKTKSNHIMEVNRTLGIEAARRS 1206

Query: 614  IIDEIQYTMSSHGMTIDIRHMMLLADLMTFKGEVLGITRHGVQKMKDSVLMLASFEKTAD 435
            IIDEIQYTM SHGM ID RHMMLLADLMT+KGE+LGITR+G+ KMK SVLMLASFEKTA+
Sbjct: 1207 IIDEIQYTMKSHGMNIDSRHMMLLADLMTYKGEILGITRYGIAKMKSSVLMLASFEKTAE 1266

Query: 434  HLFNASVNGRVDRIEGVSECIIMGIPMQIGTGMLKVRQSVQPV-ELNYGPDPII 276
            HLFNAS +GR D+IEGVSECIIMGIPMQ+GTG+LKVRQ +  + E  Y PDPI+
Sbjct: 1267 HLFNASYSGREDQIEGVSECIIMGIPMQLGTGILKVRQRLDHLPEFKYQPDPIL 1320


>ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group]
            gi|38346223|emb|CAE02045.2| OJ990528_30.3 [Oryza sativa
            Japonica Group] gi|38347455|emb|CAD41360.2|
            OSJNBa0076N16.24 [Oryza sativa Japonica Group]
            gi|113564746|dbj|BAF15089.1| Os04g0492300 [Oryza sativa
            Japonica Group] gi|116310339|emb|CAH67354.1|
            OSIGBa0130B08.14 [Oryza sativa Indica Group]
            gi|116310740|emb|CAH67535.1| H0425E08.3 [Oryza sativa
            Indica Group] gi|215768005|dbj|BAH00234.1| unnamed
            protein product [Oryza sativa Japonica Group]
            gi|218195112|gb|EEC77539.1| hypothetical protein
            OsI_16437 [Oryza sativa Indica Group]
          Length = 1383

 Score =  449 bits (1155), Expect = e-123
 Identities = 245/414 (59%), Positives = 305/414 (73%), Gaps = 2/414 (0%)
 Frame = -2

Query: 1511 KKYPSSILVLKSNERQHSEEDQSCLENVASNISGITRQQLIVFLETCISRYHSKKXXXXX 1332
            K   S+   L  +E    E   S  E++A+NISGI+ +QL VFL+TC+SRYH KK     
Sbjct: 973  KLLKSTRRALLLDEDHVGERHSSFEESIAANISGISVKQLQVFLDTCLSRYHLKKIEAGA 1032

Query: 1331 XXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKRINTPIITTTLQC 1152
                      GEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAK+I+TPIIT  L  
Sbjct: 1033 SIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKKISTPIITAELLS 1092

Query: 1151 DNNEIIAKLVKGRIEKTLLEQVAKSIKTSQASRLASIVITLDMKRIQGAQLSVDAYTVKE 972
            + + + A++VKG +EK +L +VA++IK    S   ++V+ LDM+RI+   + + A +V+ 
Sbjct: 1093 EKDVLSARIVKGSMEKAVLGEVAEAIKIVLKSSQPNLVVKLDMQRIEALHMGISADSVQL 1152

Query: 971  SILQTPKMKLKEQQVRVLNPRKLEVILQA-DRNKLQFELHTLKNKISKVVVKGINSVERA 795
            SIL  PK+KLK + VRV++  KL +     D++KL +ELH LK+ + KV+VKGI +VERA
Sbjct: 1153 SILNHPKIKLKSEHVRVIDKSKLRIYPAGIDKSKLLYELHHLKSMLPKVIVKGIPTVERA 1212

Query: 794  IIINEAKEKDPSGNKRLKLLVEGTGLLSVMGIDGVDGCKTTSNHIIEVQQTLGIEAARKK 615
            +I    +E D    KR KLLVEGT LL+VMG  GVD  KT SNHI+EV +TLGIEAAR+ 
Sbjct: 1213 VISETGEEND----KRYKLLVEGTNLLAVMGTPGVDAMKTKSNHIMEVNRTLGIEAARRS 1268

Query: 614  IIDEIQYTMSSHGMTIDIRHMMLLADLMTFKGEVLGITRHGVQKMKDSVLMLASFEKTAD 435
            IIDEIQYTM SHGM ID RHMMLLADLMT+KGE+LGITR+G+ KMK SVLMLASFEKTA+
Sbjct: 1269 IIDEIQYTMKSHGMNIDSRHMMLLADLMTYKGEILGITRYGIAKMKSSVLMLASFEKTAE 1328

Query: 434  HLFNASVNGRVDRIEGVSECIIMGIPMQIGTGMLKVRQSVQPV-ELNYGPDPII 276
            HLFNAS +GR D+IEGVSECIIMGIPMQ+GTG+LKVRQ +  + E  Y PDPI+
Sbjct: 1329 HLFNASYSGREDQIEGVSECIIMGIPMQLGTGILKVRQRLDHLPEFKYQPDPIL 1382


>ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Oryza
            brachyantha]
          Length = 1389

 Score =  445 bits (1145), Expect = e-122
 Identities = 246/414 (59%), Positives = 306/414 (73%), Gaps = 8/414 (1%)
 Frame = -2

Query: 1493 ILVLKSNER------QHSEEDQSCLENVASNISGITRQQLIVFLETCISRYHSKKXXXXX 1332
            I +LKS  R       H  +D S  E++A+NISGI+ +QL VFL+TC+SRYHSKK     
Sbjct: 983  IKLLKSTRRALCLDENHVGKDSSIEESIAANISGISAKQLQVFLDTCLSRYHSKKIEAGA 1042

Query: 1331 XXXXXXXXXXGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKRINTPIITTTLQC 1152
                      GEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAK+I+TPIIT  L  
Sbjct: 1043 SIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKKISTPIITAELLS 1102

Query: 1151 DNNEIIAKLVKGRIEKTLLEQVAKSIKTSQASRLASIVITLDMKRIQGAQLSVDAYTVKE 972
              + + A++VKG +EK +L +VA+ IK    S   ++V+ LDM+RI+   + + A +V+ 
Sbjct: 1103 GKDVLSARVVKGSMEKAVLGEVAEDIKIVLKSSQPNLVVKLDMQRIEDLHMGISADSVQL 1162

Query: 971  SILQTPKMKLKEQQVRVLNPRKLEVILQA-DRNKLQFELHTLKNKISKVVVKGINSVERA 795
            SIL  P++KLK + VRV++  KL V   A D++KL +ELH LK+ + KV+VKGI +VERA
Sbjct: 1163 SILNHPRIKLKSEHVRVIDKAKLRVYPTAIDKSKLLYELHNLKSMLPKVIVKGIPTVERA 1222

Query: 794  IIINEAKEKDPSGNKRLKLLVEGTGLLSVMGIDGVDGCKTTSNHIIEVQQTLGIEAARKK 615
            +I         +G+K   LLVEGT LL+VMG  GVD  KT SNHI+EV +TLGIEAAR+ 
Sbjct: 1223 VI-------SQTGDK-YSLLVEGTNLLAVMGTPGVDAMKTKSNHIMEVNRTLGIEAARRS 1274

Query: 614  IIDEIQYTMSSHGMTIDIRHMMLLADLMTFKGEVLGITRHGVQKMKDSVLMLASFEKTAD 435
            IIDEIQYTM+SHGM ID RHMMLLADLMT+KGE+LGITR+G+ KMK SVLMLASFEKTA+
Sbjct: 1275 IIDEIQYTMTSHGMNIDSRHMMLLADLMTYKGEILGITRYGIAKMKSSVLMLASFEKTAE 1334

Query: 434  HLFNASVNGRVDRIEGVSECIIMGIPMQIGTGMLKVRQSVQPV-ELNYGPDPII 276
            HLFNAS +GR D+IEGVSECIIMGIPMQ+GTG+LKVRQ +  + E  Y PDPI+
Sbjct: 1335 HLFNASYSGREDQIEGVSECIIMGIPMQLGTGILKVRQRLDHLPEFKYQPDPIL 1388


>ref|XP_001757221.1| predicted protein [Physcomitrella patens] gi|162691719|gb|EDQ78080.1|
            predicted protein [Physcomitrella patens]
          Length = 1397

 Score =  443 bits (1139), Expect = e-121
 Identities = 246/399 (61%), Positives = 297/399 (74%), Gaps = 7/399 (1%)
 Frame = -2

Query: 1451 DQSCLENVASNISGITRQQLI-----VFLETCISRYHSKKXXXXXXXXXXXXXXXGEPGT 1287
            DQ+ LE+ A+ ISG+T +QL      VFL+TCI RYH K+               GEPGT
Sbjct: 1006 DQTLLESTATYISGLTSRQLEICLLQVFLDTCIKRYHMKRVEPGAAVGAVGAQSIGEPGT 1065

Query: 1286 QMTLKTFHFAGVASMNVTLGVPRIKEIINAAKRINTPIITTTLQCDNNEIIAKLVKGRIE 1107
            QMTLKTFHFAGVASMN+TLGVPRIKEIINA+K I+TPIIT  L   N+E  A++VKGRIE
Sbjct: 1066 QMTLKTFHFAGVASMNITLGVPRIKEIINASKNISTPIITAVLVSGNDEKAARIVKGRIE 1125

Query: 1106 KTLLEQVAKSIKTSQASRLASIVITLDMKRIQGAQLSVDAYTVKESILQTPKMKLKEQQV 927
            KT L +VAKSIKT   +  A I + LDMKRI   QL +++ TV  +I+QTPK+KLK   +
Sbjct: 1126 KTTLGEVAKSIKTVLRASQAIISVKLDMKRIDALQLDINSDTVALAIVQTPKIKLKHVNI 1185

Query: 926  RVLNPRKLEVIL-QADRNKLQFELHTLKNKISKVVVKGINSVERAIIINEAKEKDPSGNK 750
            R+++  KL VI    D+ KL F LH+L N + KV+VKGI SVERA+I    KEK      
Sbjct: 1186 RIVDRDKLIVIPPDQDKGKLYFYLHSLCNMLPKVIVKGIPSVERAVI---NKEKGV---- 1238

Query: 749  RLKLLVEGTGLLSVMGIDGVDGCKTTSNHIIEVQQTLGIEAARKKIIDEIQYTMSSHGMT 570
               LLVEGT L +VMGI GV+G  T SNH+IE +QTLGIEAAR  IIDEIQYTM SHGMT
Sbjct: 1239 -YNLLVEGTNLKAVMGISGVNGKLTKSNHVIEAEQTLGIEAARNVIIDEIQYTMGSHGMT 1297

Query: 569  IDIRHMMLLADLMTFKGEVLGITRHGVQKMKDSVLMLASFEKTADHLFNASVNGRVDRIE 390
            ID RHMMLLAD+MT+KGEVLGITR G+ KMKDSVLMLASFEKT DHLF+A+++GRVD+IE
Sbjct: 1298 IDARHMMLLADVMTYKGEVLGITRFGIAKMKDSVLMLASFEKTTDHLFDAAIHGRVDKIE 1357

Query: 389  GVSECIIMGIPMQIGTGMLKVRQSVQPV-ELNYGPDPII 276
            GVSECIIMGIPM IGTG+ K+RQ V+ + +L+YGP P++
Sbjct: 1358 GVSECIIMGIPMPIGTGLFKIRQKVEKLPKLSYGPTPLL 1396


>ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Glycine
            max]
          Length = 1391

 Score =  442 bits (1138), Expect = e-121
 Identities = 241/404 (59%), Positives = 294/404 (72%), Gaps = 2/404 (0%)
 Frame = -2

Query: 1481 KSNERQHSEEDQSCLENVASNISGITRQQLIVFLETCISRYHSKKXXXXXXXXXXXXXXX 1302
            K  E   ++E    L+     ISGITR+QL VFL  C+SRYHSKK               
Sbjct: 993  KLTEEGFTDEHSQNLKKFGQRISGITRKQLDVFLNICLSRYHSKKMEAGAPVGATGAHSI 1052

Query: 1301 GEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKRINTPIITTTLQCDNNEIIAKLV 1122
            GEPGTQMTLKTFHFAGVASMNVTLGVPR+KEI+N  K+I+TPIIT  L+ D+N   A++V
Sbjct: 1053 GEPGTQMTLKTFHFAGVASMNVTLGVPRVKEIMNGNKKISTPIITAILERDDNANTARIV 1112

Query: 1121 KGRIEKTLLEQVAKSIKTSQASRLASIVITLDMKRIQGAQLSVDAYTVKESILQTPKMKL 942
            KGRIEKT L QVAKSIK    SR AS+VITLDMKRIQ A L++DA  VKESIL+T K KL
Sbjct: 1113 KGRIEKTNLGQVAKSIKVVMTSRSASVVITLDMKRIQDAHLNIDANIVKESILRTKKTKL 1172

Query: 941  KEQQVRVLNPRKLEVILQ-ADRNKLQFELHTLKNKISKVVVKGINSVERAIIINEAKEKD 765
            K + +++L+ +KLEV+ Q  DR+K+ F+LH LKN +  VVVKGI +V+R +I  + K   
Sbjct: 1173 KPEHIKILDIKKLEVVPQDVDRSKIHFQLHYLKNLLPTVVVKGIKTVDRVVISKDTKA-- 1230

Query: 764  PSGNKRLKLLVEGTGLLSVMGIDGVDGCKTTSNHIIEVQQTLGIEAARKKIIDEIQYTM- 588
                ++ +LLVEGTG   VMG++G+DG KT SNHI EV+ TLGIEAAR+ I+ EI+YTM 
Sbjct: 1231 ----EKFRLLVEGTGFREVMGVEGIDGRKTVSNHIHEVRDTLGIEAARESIVKEIKYTMV 1286

Query: 587  SSHGMTIDIRHMMLLADLMTFKGEVLGITRHGVQKMKDSVLMLASFEKTADHLFNASVNG 408
             +HGM IDIRHMMLLAD+MT  G +LGI R G+ KM  SVLMLASFE+TAD LF ASV G
Sbjct: 1287 DTHGMNIDIRHMMLLADMMTATGHILGINRFGISKMGKSVLMLASFERTADILFQASVRG 1346

Query: 407  RVDRIEGVSECIIMGIPMQIGTGMLKVRQSVQPVELNYGPDPII 276
            R D I GVSE IIMGIP+QIGTGM+KV+Q + P EL +G  PI+
Sbjct: 1347 RDDSIGGVSESIIMGIPIQIGTGMIKVKQRLDPPELPHGTSPIL 1390


>ref|XP_002300065.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
            gi|222847323|gb|EEE84870.1| DNA-directed RNA polymerase
            family protein [Populus trichocarpa]
          Length = 1394

 Score =  441 bits (1135), Expect = e-121
 Identities = 236/374 (63%), Positives = 286/374 (76%), Gaps = 2/374 (0%)
 Frame = -2

Query: 1436 ENVASNISGITRQQLIVFLETCISRYHSKKXXXXXXXXXXXXXXXGEPGTQMTLKTFHFA 1257
            E +A  +SGIT +QL VFL+TC+ RY  K+               GEPGTQMTLKTFHFA
Sbjct: 1020 EKIAQKVSGITEKQLEVFLKTCLDRYVWKRIEPGTAIGAIGAQSIGEPGTQMTLKTFHFA 1079

Query: 1256 GVASMNVTLGVPRIKEIINAAKRINTPIITTTLQCDNNEIIAKLVKGRIEKTLLEQVAKS 1077
            GVASMN+T GVPRIKEIIN AKRI+TPIIT  L+ ++N   A+++KGRI+KT+L QVAKS
Sbjct: 1080 GVASMNITQGVPRIKEIINGAKRISTPIITVELEHNSNVNAARIIKGRIQKTVLGQVAKS 1139

Query: 1076 IKTSQASRLASIVITLDMKRIQGAQLSVDAYTVKESILQTPKMKLKEQQVRVLNPRKLEV 897
            IK    SR AS+ +TLDMK I+ AQLS+DA  V+E IL+TPK+K K Q++ VL   KLEV
Sbjct: 1140 IKIVMTSRSASVKVTLDMKTIREAQLSLDANIVRELILETPKIKRKLQRINVLEDGKLEV 1199

Query: 896  ILQADRNKLQFELHTLKNKISKVVVKGINSVERAIIINEAKE--KDPSGNKRLKLLVEGT 723
                DRNKL FELH+LKN +  VVVKGI +VER +I  +  +  ++  G  +  + VEG 
Sbjct: 1200 FPGGDRNKLHFELHSLKNMLPAVVVKGIKTVERVVIAQKKLDDAENDQGGPKYNMFVEGM 1259

Query: 722  GLLSVMGIDGVDGCKTTSNHIIEVQQTLGIEAARKKIIDEIQYTMSSHGMTIDIRHMMLL 543
            GL +VMG +GVDG KT SNHIIEVQ+TLGIEAARK IIDEI+ TM SHGM+IDIRHMMLL
Sbjct: 1260 GLQAVMGTEGVDGRKTKSNHIIEVQETLGIEAARKCIIDEIKGTMESHGMSIDIRHMMLL 1319

Query: 542  ADLMTFKGEVLGITRHGVQKMKDSVLMLASFEKTADHLFNASVNGRVDRIEGVSECIIMG 363
            AD+MT +G VLGITR G+QKM  SVLMLASFEKT+DHLFNASV G+ D+IEGVSECIIMG
Sbjct: 1320 ADVMTSRGVVLGITRFGIQKMDKSVLMLASFEKTSDHLFNASVKGKDDKIEGVSECIIMG 1379

Query: 362  IPMQIGTGMLKVRQ 321
            IP+ IGTG+LK++Q
Sbjct: 1380 IPVAIGTGVLKIQQ 1393


>ref|XP_004294640.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
            [Fragaria vesca subsp. vesca]
          Length = 1390

 Score =  439 bits (1129), Expect = e-120
 Identities = 239/393 (60%), Positives = 287/393 (73%), Gaps = 8/393 (2%)
 Frame = -2

Query: 1475 NERQHSEEDQSCLENVASNISGITRQQLIVFLETCISRYHSKKXXXXXXXXXXXXXXXGE 1296
            N+    E   + L+N+  NISG+T +QL VFL+TCISRYHSKK               GE
Sbjct: 993  NQSPGWEVKSATLQNIVQNISGVTPRQLKVFLDTCISRYHSKKVDAGTAIGVIGAQSIGE 1052

Query: 1295 PGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKRINTPIITTTLQCDNNEIIAKLVKG 1116
            PGTQMTLKTFHFAGVASMNVTLGVPRIKEIIN AK I+TPIITT L+CDNN +IA++V G
Sbjct: 1053 PGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKNIHTPIITTVLECDNNPMIARMVAG 1112

Query: 1115 RIEKTLLEQVAKSIKTSQASRLASIVITLDMKRIQGAQLSVDAYTVKESILQTPKMKLKE 936
            RIEKT L QVA+ I+   + R A + + LDM  IQ A LS+DA  VK+SIL TP++KLK 
Sbjct: 1113 RIEKTNLGQVAECIEIVMSPRAAYVEVKLDMAVIQDAHLSIDANVVKQSILGTPRIKLKH 1172

Query: 935  QQVRVLNPRKLEVIL-QADRNKLQFELHTLKNKISKVVVKGINSVERAIIINEAKEKDPS 759
            + +RV + + +EV   + DR KL F L+ LK+ +  V+V+GI ++ER +I  E  ++D  
Sbjct: 1173 EHIRVPDNQTVEVHSHEKDRRKLHFHLYYLKSILPNVIVRGIKTIERVVIDEEKVKRDKK 1232

Query: 758  G-------NKRLKLLVEGTGLLSVMGIDGVDGCKTTSNHIIEVQQTLGIEAARKKIIDEI 600
                     K+ KL  EG GLL+VM   GVDGCKTTSN IIEVQQTLGIEAAR  II+EI
Sbjct: 1233 DIDIKCGDEKKYKLFAEGKGLLAVMSTKGVDGCKTTSNDIIEVQQTLGIEAARTCIIEEI 1292

Query: 599  QYTMSSHGMTIDIRHMMLLADLMTFKGEVLGITRHGVQKMKDSVLMLASFEKTADHLFNA 420
            +YTM SHGM ID RHMMLLAD+MTF+G VLGITR GVQ+M  SVLMLASFE+T DHLFNA
Sbjct: 1293 KYTMKSHGMNIDDRHMMLLADVMTFRGLVLGITRFGVQQMGKSVLMLASFERTDDHLFNA 1352

Query: 419  SVNGRVDRIEGVSECIIMGIPMQIGTGMLKVRQ 321
            SV G VD+IEGVSE IIMGIPM IGTGM K++Q
Sbjct: 1353 SVQGTVDKIEGVSESIIMGIPMPIGTGMFKIKQ 1385


>ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [Sorghum bicolor]
            gi|241937900|gb|EES11045.1| hypothetical protein
            SORBIDRAFT_06g021120 [Sorghum bicolor]
          Length = 1391

 Score =  437 bits (1123), Expect = e-120
 Identities = 238/399 (59%), Positives = 300/399 (75%), Gaps = 3/399 (0%)
 Frame = -2

Query: 1463 HSEEDQSCLE-NVASNISGITRQQLIVFLETCISRYHSKKXXXXXXXXXXXXXXXGEPGT 1287
            H E+  SC+E +VA+ ISGI+ +QL VFL+TC+SRY SKK               GEPGT
Sbjct: 995  HVEKKDSCVEESVAAIISGISAKQLQVFLDTCLSRYQSKKIEAGASIGAIGAQSIGEPGT 1054

Query: 1286 QMTLKTFHFAGVASMNVTLGVPRIKEIINAAKRINTPIITTTLQCDNNEIIAKLVKGRIE 1107
            QMTLKTFHFAGVASMNVTLGVPRIKEIINAA++I+TPIIT  L    + + A++VKG +E
Sbjct: 1055 QMTLKTFHFAGVASMNVTLGVPRIKEIINAARKISTPIITAQLLSKKDVLSARIVKGSME 1114

Query: 1106 KTLLEQVAKSIKTSQASRLASIVITLDMKRIQGAQLSVDAYTVKESILQTPKMKLKEQQV 927
            K +L +VA +I+    S   ++++ LDM+ I+   + + A +V+ SIL  PK+KLK + V
Sbjct: 1115 KAVLGEVAVAIQIVLKSSQPNLIVKLDMQLIESLHMGISADSVQLSILNHPKIKLKSEHV 1174

Query: 926  RVLNPRKLEVI-LQADRNKLQFELHTLKNKISKVVVKGINSVERAIIINEAKEKDPSGNK 750
            RV++  KL +     D+ KLQ ELH LK+ + KV+VKGI +VER ++I+E K K+ +  +
Sbjct: 1175 RVIDRAKLRIYPAGTDKRKLQLELHNLKSILPKVIVKGIPTVER-VVIDEVKVKNET--E 1231

Query: 749  RLKLLVEGTGLLSVMGIDGVDGCKTTSNHIIEVQQTLGIEAARKKIIDEIQYTMSSHGMT 570
            R +LLVEGT LL+VMG  GVD  KT SNHI+E  QTLGIEAAR+ IIDEIQYTM SHGM 
Sbjct: 1232 RYQLLVEGTNLLAVMGTPGVDATKTKSNHIMETNQTLGIEAARRSIIDEIQYTMKSHGMN 1291

Query: 569  IDIRHMMLLADLMTFKGEVLGITRHGVQKMKDSVLMLASFEKTADHLFNASVNGRVDRIE 390
            ID RHMMLLADLMT+KGE+LGITR+G+ KMK SVLMLASFEKT++HLFNAS +GR D+IE
Sbjct: 1292 IDRRHMMLLADLMTYKGEILGITRYGIAKMKSSVLMLASFEKTSEHLFNASYSGREDQIE 1351

Query: 389  GVSECIIMGIPMQIGTGMLKVRQSVQPV-ELNYGPDPII 276
            GVSECIIMGIPMQ+GTG+LKVRQ +  V E  Y PDPI+
Sbjct: 1352 GVSECIIMGIPMQLGTGILKVRQRLDHVPEFKYQPDPIL 1390