BLASTX nr result
ID: Rehmannia23_contig00019961
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00019961
(485 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006354668.1| PREDICTED: pentatricopeptide repeat-containi... 185 6e-45
ref|XP_004229586.1| PREDICTED: pentatricopeptide repeat-containi... 184 1e-44
ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containi... 180 2e-43
emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera] 180 2e-43
ref|XP_002535423.1| pentatricopeptide repeat-containing protein,... 179 3e-43
gb|EMJ22183.1| hypothetical protein PRUPE_ppa002467mg [Prunus pe... 177 1e-42
gb|EOY10338.1| Tetratricopeptide repeat (TPR)-like superfamily p... 172 3e-41
ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containi... 170 2e-40
ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containi... 170 2e-40
ref|XP_004308640.1| PREDICTED: pentatricopeptide repeat-containi... 164 1e-38
ref|XP_006408289.1| hypothetical protein EUTSA_v10020027mg [Eutr... 151 1e-34
ref|XP_002884396.1| pentatricopeptide repeat-containing protein ... 144 9e-33
ref|XP_006296957.1| hypothetical protein CARUB_v10012948mg [Caps... 144 2e-32
ref|NP_187008.1| pentatricopeptide repeat-containing protein [Ar... 142 6e-32
emb|CBI39966.3| unnamed protein product [Vitis vinifera] 131 8e-29
gb|ESW29114.1| hypothetical protein PHAVU_002G044500g [Phaseolus... 108 1e-21
ref|XP_006833054.1| hypothetical protein AMTR_s00170p00032020 [A... 106 4e-21
ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containi... 103 2e-20
ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containi... 103 2e-20
ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containi... 102 4e-20
>ref|XP_006354668.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Solanum tuberosum]
Length = 891
Score = 185 bits (469), Expect = 6e-45
Identities = 86/161 (53%), Positives = 117/161 (72%)
Frame = -1
Query: 485 NGFFEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIV 306
NG++E+ALE + + R+ G+ D+F E++QGQ VHGL EK G ++ V
Sbjct: 196 NGYWEEALEAFREGRLSGVAADAFTVSSVLPACGGLMEVEQGQIVHGLVEKSGIKGDIAV 255
Query: 305 SNGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEMVGHFE 126
SNGLLSMYFKF+ L +C RIF+EM+ RD VTWN IICG+ SG Y+ESI+L+ EMV +E
Sbjct: 256 SNGLLSMYFKFERLLDCQRIFDEMIFRDIVTWNIIICGFSHSGLYQESIKLFREMVYEYE 315
Query: 125 PDILTITSVLRACTYVGNLKFGRYVYDYMVRNGYEFDIIAC 3
PD+LT+TSVL+AC ++G+L+FGRYV+DY++ N YE D AC
Sbjct: 316 PDLLTVTSVLQACGHMGDLRFGRYVHDYILENRYECDTTAC 356
Score = 84.0 bits (206), Expect = 2e-14
Identities = 43/159 (27%), Positives = 86/159 (54%), Gaps = 1/159 (0%)
Frame = -1
Query: 485 NGFFEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIV 306
NG + AL+ YTQ+R + PD++ +++ + VH ++G ++ +
Sbjct: 95 NGLWSKALDFYTQMRKLNVKPDNYTFPSIINSCGSLLDLEMVKIVHNDVLEMGFGSDLYI 154
Query: 305 SNGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYME-MVGHF 129
N L+ MY + + L +F++M RD V+WN+++ GY +G++EE++ + E +
Sbjct: 155 CNALIDMYSRMNELGRAREVFDKMPSRDVVSWNSLVSGYSANGYWEEALEAFREGRLSGV 214
Query: 128 EPDILTITSVLRACTYVGNLKFGRYVYDYMVRNGYEFDI 12
D T++SVL AC + ++ G+ V+ + ++G + DI
Sbjct: 215 AADAFTVSSVLPACGGLMEVEQGQIVHGLVEKSGIKGDI 253
Score = 65.1 bits (157), Expect = 9e-09
Identities = 45/160 (28%), Positives = 76/160 (47%), Gaps = 2/160 (1%)
Frame = -1
Query: 485 NGFFEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIV 306
NGF ++A+++ +R+D L PDS ++ +++H K G +IV
Sbjct: 397 NGFNKEAVDLLKMMRID-LQPDSVTFVTLLSMCTELMDVDFARELHCDIIKRGYDSTLIV 455
Query: 305 SNGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTII--CGYCESGFYEESIRLYMEMVGH 132
N LL +Y K + + + F M RD VTWNTII C + E + + M M G
Sbjct: 456 GNALLDVYAKCGKMEHSVWQFEIMSTRDIVTWNTIIAACSHYEESYVGLKMLSRMRMEG- 514
Query: 131 FEPDILTITSVLRACTYVGNLKFGRYVYDYMVRNGYEFDI 12
PD+ TI L C+ + + G+ ++ +++R E +
Sbjct: 515 IMPDVATILGSLPLCSLLAAKRQGKELHGFIIRLNLESQV 554
Score = 64.7 bits (156), Expect = 1e-08
Identities = 39/160 (24%), Positives = 85/160 (53%), Gaps = 1/160 (0%)
Frame = -1
Query: 485 NGFFEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHG-LAEKVGTCRNVI 309
+G ++++++++ ++ + PD G+++ G+ VH + E C +
Sbjct: 297 SGLYQESIKLFREMVYE-YEPDLLTVTSVLQACGHMGDLRFGRYVHDYILENRYEC-DTT 354
Query: 308 VSNGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEMVGHF 129
N +++MY + L ++F+ M D V+WN++I GY E+GF +E++ L M
Sbjct: 355 ACNIIINMYARCGDLVAARQVFDNMKRWDLVSWNSMISGYFENGFNKEAVDLLKMMRIDL 414
Query: 128 EPDILTITSVLRACTYVGNLKFGRYVYDYMVRNGYEFDII 9
+PD +T ++L CT + ++ F R ++ +++ GY+ +I
Sbjct: 415 QPDSVTFVTLLSMCTELMDVDFARELHCDIIKRGYDSTLI 454
Score = 64.3 bits (155), Expect = 2e-08
Identities = 38/143 (26%), Positives = 72/143 (50%), Gaps = 1/143 (0%)
Frame = -1
Query: 464 LEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIVSNGLLSM 285
L++ +++RM+G++PD +QG+++HG ++ V V N L+ M
Sbjct: 504 LKMLSRMRMEGIMPDVATILGSLPLCSLLAAKRQGKELHGFIIRLNLESQVPVGNALIEM 563
Query: 284 YFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEMVGHFEP-DILTI 108
Y K L N + +F M +D VTW +I Y G ++++R + +M D +
Sbjct: 564 YSKTGSLKNAILVFEHMRIKDVVTWTAMISAYGMYGEGKKALRSFQQMKETGTVLDHIVF 623
Query: 107 TSVLRACTYVGNLKFGRYVYDYM 39
+V+ AC++ G ++ GR ++ M
Sbjct: 624 VAVIYACSHSGLVQDGRACFNQM 646
>ref|XP_004229586.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Solanum lycopersicum]
Length = 891
Score = 184 bits (467), Expect = 1e-44
Identities = 84/161 (52%), Positives = 118/161 (73%)
Frame = -1
Query: 485 NGFFEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIV 306
NG++E+ALE++ + R+ G+ D+F E++QGQ VHGL EK G ++ V
Sbjct: 196 NGYWEEALEVFREGRLSGVAADAFTVSSVLPACGGLMEVEQGQMVHGLVEKSGIKGDMAV 255
Query: 305 SNGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEMVGHFE 126
SNGLLSMYFKF+ L +C RIF+EM++RD VTWN IICG+ SG Y+ESI+L+ EMV +
Sbjct: 256 SNGLLSMYFKFERLLDCQRIFDEMIYRDIVTWNIIICGFSHSGLYQESIKLFQEMVDEHK 315
Query: 125 PDILTITSVLRACTYVGNLKFGRYVYDYMVRNGYEFDIIAC 3
PD+LT+TSVL+AC ++G+L+FGR+V+DY++ N YE D AC
Sbjct: 316 PDLLTVTSVLQACGHMGDLRFGRFVHDYILENRYECDTTAC 356
Score = 85.5 bits (210), Expect = 7e-15
Identities = 43/159 (27%), Positives = 87/159 (54%), Gaps = 1/159 (0%)
Frame = -1
Query: 485 NGFFEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIV 306
NG + AL+ YTQ+R + PD++ +++ + VH ++G ++ +
Sbjct: 95 NGLWSKALDFYTQMRKLNVKPDNYTFPSIINSCGSLLDLEMVKIVHNEVSEMGFGSDLYI 154
Query: 305 SNGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYME-MVGHF 129
N L+ MY + + L +F+EM RD V+WN+++ GY +G++EE++ ++ E +
Sbjct: 155 CNALIDMYARMNELGRARVVFDEMPSRDVVSWNSLVSGYSANGYWEEALEVFREGRLSGV 214
Query: 128 EPDILTITSVLRACTYVGNLKFGRYVYDYMVRNGYEFDI 12
D T++SVL AC + ++ G+ V+ + ++G + D+
Sbjct: 215 AADAFTVSSVLPACGGLMEVEQGQMVHGLVEKSGIKGDM 253
Score = 66.2 bits (160), Expect = 4e-09
Identities = 40/144 (27%), Positives = 73/144 (50%), Gaps = 2/144 (1%)
Frame = -1
Query: 464 LEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIVSNGLLSM 285
L++ +++R +GL+PD +QG+++HG ++ V V N L+ M
Sbjct: 504 LKMLSRMRTEGLMPDVATILGSLPLCSLLAAKRQGKELHGFIIRLKFESQVPVGNALIEM 563
Query: 284 YFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEM--VGHFEPDILT 111
Y K L N + +F M +D VTW +I Y G ++++R + +M G PD +
Sbjct: 564 YSKTGSLKNAISVFEHMSIKDVVTWTAMISAYGMYGEGKKALRSFQQMKETGTI-PDHIV 622
Query: 110 ITSVLRACTYVGNLKFGRYVYDYM 39
+V+ AC++ G ++ GR ++ M
Sbjct: 623 FVAVIYACSHSGLVQEGRACFNQM 646
Score = 64.3 bits (155), Expect = 2e-08
Identities = 40/160 (25%), Positives = 85/160 (53%), Gaps = 1/160 (0%)
Frame = -1
Query: 485 NGFFEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHG-LAEKVGTCRNVI 309
+G ++++++++ ++ +D PD G+++ G+ VH + E C +
Sbjct: 297 SGLYQESIKLFQEM-VDEHKPDLLTVTSVLQACGHMGDLRFGRFVHDYILENRYEC-DTT 354
Query: 308 VSNGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEMVGHF 129
N +++MY + L ++F+ M D V+WN+II GY E+G +E++ L M
Sbjct: 355 ACNIIINMYARCGDLVAARQVFDNMKRWDLVSWNSIISGYFENGLNKEAVDLLKMMRIDL 414
Query: 128 EPDILTITSVLRACTYVGNLKFGRYVYDYMVRNGYEFDII 9
+PD +T ++L CT + ++ F R ++ +++ GY+ +I
Sbjct: 415 QPDSVTFVTLLSMCTKLMDVDFTRELHCDIIKRGYDSTLI 454
Score = 61.6 bits (148), Expect = 1e-07
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 2/160 (1%)
Frame = -1
Query: 485 NGFFEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIV 306
NG ++A+++ +R+D L PDS ++ +++H K G +IV
Sbjct: 397 NGLNKEAVDLLKMMRID-LQPDSVTFVTLLSMCTKLMDVDFTRELHCDIIKRGYDSTLIV 455
Query: 305 SNGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTII--CGYCESGFYEESIRLYMEMVGH 132
N LL +Y K + + + F M RD VTWNTII C + E + + M G
Sbjct: 456 GNALLDVYAKCGRMEHSVWQFEIMTSRDIVTWNTIIAACSHYEESYLGLKMLSRMRTEG- 514
Query: 131 FEPDILTITSVLRACTYVGNLKFGRYVYDYMVRNGYEFDI 12
PD+ TI L C+ + + G+ ++ +++R +E +
Sbjct: 515 LMPDVATILGSLPLCSLLAAKRQGKELHGFIIRLKFESQV 554
>ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 180 bits (456), Expect = 2e-43
Identities = 85/160 (53%), Positives = 121/160 (75%)
Frame = -1
Query: 485 NGFFEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIV 306
NG++ +ALEIY + R G+VPDS+ G +++G +HGL EK+G ++VIV
Sbjct: 194 NGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIV 253
Query: 305 SNGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEMVGHFE 126
+NGLLSMY KF+ L + RIF++MV RD+V+WNT+ICGY + G YEESI+L+MEMV F+
Sbjct: 254 NNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQFK 313
Query: 125 PDILTITSVLRACTYVGNLKFGRYVYDYMVRNGYEFDIIA 6
PD+LTITS+L+AC ++G+L+FG+YV+DYM+ +GYE D A
Sbjct: 314 PDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTA 353
Score = 90.1 bits (222), Expect = 3e-16
Identities = 45/160 (28%), Positives = 86/160 (53%), Gaps = 1/160 (0%)
Frame = -1
Query: 485 NGFFEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIV 306
NG F +AL +Y++ + L PD++ + + + +H +G ++ +
Sbjct: 93 NGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYI 152
Query: 305 SNGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEMVG-HF 129
N L+ MY +F+ L ++F EM RD V+WN++I GY +G++ E++ +Y
Sbjct: 153 GNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGV 212
Query: 128 EPDILTITSVLRACTYVGNLKFGRYVYDYMVRNGYEFDII 9
PD T++SVLRAC +G+++ G ++ + + G + D+I
Sbjct: 213 VPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVI 252
Score = 77.8 bits (190), Expect = 1e-12
Identities = 46/163 (28%), Positives = 84/163 (51%), Gaps = 5/163 (3%)
Frame = -1
Query: 485 NGFFEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIV 306
NG F++A++++ ++ D + PDS G++ G+++H K+G N++V
Sbjct: 395 NGSFDEAMKLFKMMKTD-VKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIVV 453
Query: 305 SNGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEMVGHFE 126
SN L+ MY K + + L++F M RD +TWNTII S + E L + M+
Sbjct: 454 SNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIA----SCVHSEDCNLGLRMISRMR 509
Query: 125 -----PDILTITSVLRACTYVGNLKFGRYVYDYMVRNGYEFDI 12
PD+ T+ S+L C+ + + G+ ++ + + G E D+
Sbjct: 510 TEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDV 552
Score = 67.8 bits (164), Expect = 1e-09
Identities = 39/158 (24%), Positives = 84/158 (53%)
Frame = -1
Query: 482 GFFEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIVS 303
G +E++++++ ++ ++ PD G+++ G+ VH G + S
Sbjct: 296 GLYEESIKLFMEM-VNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTAS 354
Query: 302 NGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEMVGHFEP 123
N L++MY K L +F+ M +DSV+WN++I Y ++G ++E+++L+ M +P
Sbjct: 355 NILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMKTDVKP 414
Query: 122 DILTITSVLRACTYVGNLKFGRYVYDYMVRNGYEFDII 9
D +T +L T +G+L G+ ++ + + G+ +I+
Sbjct: 415 DSVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIV 452
Score = 63.2 bits (152), Expect = 4e-08
Identities = 38/146 (26%), Positives = 71/146 (48%), Gaps = 1/146 (0%)
Frame = -1
Query: 464 LEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIVSNGLLSM 285
L + +++R +G+ PD +QG+++HG K+G +V V N L+ M
Sbjct: 502 LRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEM 561
Query: 284 YFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEM-VGHFEPDILTI 108
Y K L N ++F M +D VTW +I G ++++R + EM PD +
Sbjct: 562 YSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAF 621
Query: 107 TSVLRACTYVGNLKFGRYVYDYMVRN 30
+++ AC++ G ++ G + M ++
Sbjct: 622 VAIIFACSHSGLVEEGLNYFHRMKKD 647
>emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 180 bits (456), Expect = 2e-43
Identities = 85/160 (53%), Positives = 121/160 (75%)
Frame = -1
Query: 485 NGFFEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIV 306
NG++ +ALEIY + R G+VPDS+ G +++G +HGL EK+G ++VIV
Sbjct: 253 NGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIV 312
Query: 305 SNGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEMVGHFE 126
+NGLLSMY KF+ L + RIF++MV RD+V+WNT+ICGY + G YEESI+L+MEMV F+
Sbjct: 313 NNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQFK 372
Query: 125 PDILTITSVLRACTYVGNLKFGRYVYDYMVRNGYEFDIIA 6
PD+LTITS+L+AC ++G+L+FG+YV+DYM+ +GYE D A
Sbjct: 373 PDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTA 412
Score = 90.1 bits (222), Expect = 3e-16
Identities = 45/160 (28%), Positives = 86/160 (53%), Gaps = 1/160 (0%)
Frame = -1
Query: 485 NGFFEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIV 306
NG F +AL +Y++ + L PD++ + + + +H +G ++ +
Sbjct: 152 NGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLXMGFGSDLYI 211
Query: 305 SNGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEMVG-HF 129
N L+ MY +F+ L ++F EM RD V+WN++I GY +G++ E++ +Y
Sbjct: 212 GNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGV 271
Query: 128 EPDILTITSVLRACTYVGNLKFGRYVYDYMVRNGYEFDII 9
PD T++SVLRAC +G+++ G ++ + + G + D+I
Sbjct: 272 VPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVI 311
Score = 77.4 bits (189), Expect = 2e-12
Identities = 46/163 (28%), Positives = 84/163 (51%), Gaps = 5/163 (3%)
Frame = -1
Query: 485 NGFFEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIV 306
NG F++A++++ ++ D + PDS G++ G+++H K+G N++V
Sbjct: 454 NGSFDEAMKLFKMMKTD-VKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVV 512
Query: 305 SNGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEMVGHFE 126
SN L+ MY K + + L++F M RD +TWNTII S + E L + M+
Sbjct: 513 SNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIA----SCVHSEDCNLGLRMISRMR 568
Query: 125 -----PDILTITSVLRACTYVGNLKFGRYVYDYMVRNGYEFDI 12
PD+ T+ S+L C+ + + G+ ++ + + G E D+
Sbjct: 569 TEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDV 611
Score = 67.8 bits (164), Expect = 1e-09
Identities = 39/158 (24%), Positives = 84/158 (53%)
Frame = -1
Query: 482 GFFEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIVS 303
G +E++++++ ++ ++ PD G+++ G+ VH G + S
Sbjct: 355 GLYEESIKLFMEM-VNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTAS 413
Query: 302 NGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEMVGHFEP 123
N L++MY K L +F+ M +DSV+WN++I Y ++G ++E+++L+ M +P
Sbjct: 414 NILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMKTDVKP 473
Query: 122 DILTITSVLRACTYVGNLKFGRYVYDYMVRNGYEFDII 9
D +T +L T +G+L G+ ++ + + G+ +I+
Sbjct: 474 DSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIV 511
Score = 63.2 bits (152), Expect = 4e-08
Identities = 38/146 (26%), Positives = 71/146 (48%), Gaps = 1/146 (0%)
Frame = -1
Query: 464 LEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIVSNGLLSM 285
L + +++R +G+ PD +QG+++HG K+G +V V N L+ M
Sbjct: 561 LRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEM 620
Query: 284 YFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEM-VGHFEPDILTI 108
Y K L N ++F M +D VTW +I G ++++R + EM PD +
Sbjct: 621 YSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAF 680
Query: 107 TSVLRACTYVGNLKFGRYVYDYMVRN 30
+++ AC++ G ++ G + M ++
Sbjct: 681 VAIIFACSHSGLVEEGLNYFHRMKKD 706
>ref|XP_002535423.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223523164|gb|EEF26960.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 563
Score = 179 bits (454), Expect = 3e-43
Identities = 83/160 (51%), Positives = 119/160 (74%)
Frame = -1
Query: 485 NGFFEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIV 306
NG++++ALEIY +LR+ GL PD+F +++G+ +HGL EK+G +VI+
Sbjct: 112 NGYWDEALEIYYELRIAGLKPDNFTLSSVLPACGGLLAVKEGEVIHGLVEKLGMNIDVIM 171
Query: 305 SNGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEMVGHFE 126
SNGLLSMYFKF L + R+FN+MV +D V+WNT+ICGYC+ +EESI+L+ EMV F
Sbjct: 172 SNGLLSMYFKFGRLMDAQRVFNKMVVKDYVSWNTLICGYCQMELFEESIQLFREMVKRFR 231
Query: 125 PDILTITSVLRACTYVGNLKFGRYVYDYMVRNGYEFDIIA 6
PD+LTITSVLRAC + +L+FG++V+DY++R+G EFD+ A
Sbjct: 232 PDLLTITSVLRACGLLRDLEFGKFVHDYILRSGIEFDVTA 271
Score = 92.8 bits (229), Expect = 4e-17
Identities = 47/160 (29%), Positives = 87/160 (54%), Gaps = 1/160 (0%)
Frame = -1
Query: 485 NGFFEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIV 306
NG F AL++Y +++ + PD++ G+ + G V ++G ++ +
Sbjct: 11 NGLFSKALDLYFKMKDFNVKPDTYTFPSVINACAALGDFEIGNVVQNHVLEIGFGFDLYI 70
Query: 305 SNGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEM-VGHF 129
N L+ MY +F L +F EM HRD V+WN++I GY +G+++E++ +Y E+ +
Sbjct: 71 GNALVDMYARFGDLVKARNVFEEMTHRDIVSWNSLISGYSANGYWDEALEIYYELRIAGL 130
Query: 128 EPDILTITSVLRACTYVGNLKFGRYVYDYMVRNGYEFDII 9
+PD T++SVL AC + +K G ++ + + G D+I
Sbjct: 131 KPDNFTLSSVLPACGGLLAVKEGEVIHGLVEKLGMNIDVI 170
Score = 74.3 bits (181), Expect = 2e-11
Identities = 41/144 (28%), Positives = 72/144 (50%), Gaps = 1/144 (0%)
Frame = -1
Query: 467 ALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIVSNGLLS 288
A + +Q+R + L+PD +QG++VH K G V V N L+
Sbjct: 419 AFRMISQMRNEELIPDMGTLLGILPICSLIAAKRQGKEVHACTFKFGFESTVPVGNALIE 478
Query: 287 MYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEM-VGHFEPDILT 111
MY K L C+R+F +M +D VTW ++ Y G ++++R + EM PD +
Sbjct: 479 MYSKCSNLKYCIRVFEDMKTKDVVTWTALVSAYGMYGEGKKALRAFAEMEEAGIIPDHIA 538
Query: 110 ITSVLRACTYVGNLKFGRYVYDYM 39
+++ AC++ G+++ G +D+M
Sbjct: 539 FVAIIYACSHSGSVEEGLACFDHM 562
Score = 68.9 bits (167), Expect = 6e-10
Identities = 38/156 (24%), Positives = 81/156 (51%)
Frame = -1
Query: 476 FEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIVSNG 297
FE++++++ ++ + PD +++ G+ VH + G +V SN
Sbjct: 216 FEESIQLFREM-VKRFRPDLLTITSVLRACGLLRDLEFGKFVHDYILRSGIEFDVTASNI 274
Query: 296 LLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEMVGHFEPDI 117
++ Y K L + F+ + RDSV+WNT+I GY +S Y E ++L+ +M +PD
Sbjct: 275 VIDTYAKCGDLLASRKAFDRIKCRDSVSWNTLINGYIQSRSYGEGVKLFKKMKMDLKPDS 334
Query: 116 LTITSVLRACTYVGNLKFGRYVYDYMVRNGYEFDII 9
+T ++L T + + + G+ ++ + + G++ D++
Sbjct: 335 ITFVTLLSISTRLADTELGKEIHCDLAKLGFDSDLV 370
Score = 67.4 bits (163), Expect = 2e-09
Identities = 40/153 (26%), Positives = 78/153 (50%), Gaps = 1/153 (0%)
Frame = -1
Query: 476 FEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIVSNG 297
+ + ++++ +++MD L PDS + + G+++H K+G +++VSN
Sbjct: 316 YGEGVKLFKKMKMD-LKPDSITFVTLLSISTRLADTELGKEIHCDLAKLGFDSDLVVSNA 374
Query: 296 LLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEMVG-HFEPD 120
L+ MY K + + L++F M RD VTWNTII ++ + R+ +M PD
Sbjct: 375 LVDMYSKCGNVKDSLKVFENMKVRDIVTWNTIIAACVQAEDCTLAFRMISQMRNEELIPD 434
Query: 119 ILTITSVLRACTYVGNLKFGRYVYDYMVRNGYE 21
+ T+ +L C+ + + G+ V+ + G+E
Sbjct: 435 MGTLLGILPICSLIAAKRQGKEVHACTFKFGFE 467
>gb|EMJ22183.1| hypothetical protein PRUPE_ppa002467mg [Prunus persica]
Length = 670
Score = 177 bits (449), Expect = 1e-42
Identities = 85/161 (52%), Positives = 115/161 (71%), Gaps = 2/161 (1%)
Frame = -1
Query: 485 NGFFEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIV 306
NG++E+ALEI+ +LRMDGL+PDSF ++++GQ VH L EK+G +V+V
Sbjct: 196 NGYWEEALEIFHRLRMDGLLPDSFSISGVLPACGSLVDVREGQIVHALVEKIGVHADVLV 255
Query: 305 SNGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEMVGHFE 126
SNGLLSMYFKF L + F V RDSV+WNT+ICGY + G +EESI L+MEMV F
Sbjct: 256 SNGLLSMYFKFGWLKDAQLFFQRTVVRDSVSWNTVICGYSQLGLFEESINLFMEMVNEFT 315
Query: 125 PDILTITSVLRACTYVGNLKFGRYVYDYM--VRNGYEFDII 9
PD+LTITSVLRAC ++ +L RYV+DYM ++ G+++D+I
Sbjct: 316 PDLLTITSVLRACAHLRDLGLARYVHDYMKRIKLGFDYDVI 356
Score = 86.3 bits (212), Expect = 4e-15
Identities = 44/160 (27%), Positives = 85/160 (53%), Gaps = 1/160 (0%)
Frame = -1
Query: 485 NGFFEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIV 306
NGF+ AL YT+++ + PD + +++ G VH ++G ++ +
Sbjct: 95 NGFYSKALGHYTEMQKMNVQPDRYTFPSVINACAGLCDLETGMIVHQRISEMGFGSDLYI 154
Query: 305 SNGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEM-VGHF 129
N L+ MY +F R+F EM RD V+WN++I GY +G++EE++ ++ + +
Sbjct: 155 GNALIDMYARFGEFGKARRMFEEMPLRDIVSWNSLISGYSSNGYWEEALEIFHRLRMDGL 214
Query: 128 EPDILTITSVLRACTYVGNLKFGRYVYDYMVRNGYEFDII 9
PD +I+ VL AC + +++ G+ V+ + + G D++
Sbjct: 215 LPDSFSISGVLPACGSLVDVREGQIVHALVEKIGVHADVL 254
Score = 63.5 bits (153), Expect = 3e-08
Identities = 40/151 (26%), Positives = 75/151 (49%), Gaps = 1/151 (0%)
Frame = -1
Query: 464 LEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIVSNGLLSM 285
L + ++R +G++PD+ QQG+++HG ++G +V V N L+ M
Sbjct: 406 LRMILRMRNEGVMPDAATMLGILPLCSLLAAKQQGKEIHGCIFRLGFHSDVPVGNALIEM 465
Query: 284 YFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEM-VGHFEPDILTI 108
Y L N + +F M +D VT+ ++I + G ++R + EM PD L
Sbjct: 466 YSSCGRLENSVLVFEHMKKKDVVTYTSMISAFGTYGEGVRALRTFAEMEATSVLPDHLAF 525
Query: 107 TSVLRACTYVGNLKFGRYVYDYMVRNGYEFD 15
+V+ AC++ G ++ G ++ M +N Y+ +
Sbjct: 526 LAVIFACSHSGLVEEGLAYFNRM-KNDYKIE 555
Score = 58.2 bits (139), Expect = 1e-06
Identities = 40/160 (25%), Positives = 73/160 (45%), Gaps = 3/160 (1%)
Frame = -1
Query: 482 GFFEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAE--KVGTCRNVI 309
G FE+++ ++ ++ ++ PD ++ + VH + K+G +VI
Sbjct: 298 GLFEESINLFMEM-VNEFTPDLLTITSVLRACAHLRDLGLARYVHDYMKRIKLGFDYDVI 356
Query: 308 VSNGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEMVGH- 132
V+N L MY K + + L +F M RD VTWNTII +R+ + M
Sbjct: 357 VNNALADMYAKCGKIQDSLILFENMKVRDVVTWNTIISACIHYDDRILGLRMILRMRNEG 416
Query: 131 FEPDILTITSVLRACTYVGNLKFGRYVYDYMVRNGYEFDI 12
PD T+ +L C+ + + G+ ++ + R G+ D+
Sbjct: 417 VMPDAATMLGILPLCSLLAAKQQGKEIHGCIFRLGFHSDV 456
>gb|EOY10338.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
[Theobroma cacao]
Length = 889
Score = 172 bits (437), Expect = 3e-41
Identities = 81/160 (50%), Positives = 117/160 (73%)
Frame = -1
Query: 485 NGFFEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIV 306
NG++E+ALE+Y RM G++PD + ++++G+ VH L EK+G R+V+V
Sbjct: 194 NGYWEEALEVYNMARMAGIMPDCYTVSSVLPACGGLVDVKEGEVVHCLVEKIGLHRDVVV 253
Query: 305 SNGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEMVGHFE 126
SNGLLSMYFKF+ L + RIF+EMV RD+V+WNT+ICGY + ++ESI L+M+MV FE
Sbjct: 254 SNGLLSMYFKFNRLVDARRIFDEMVVRDTVSWNTLICGYSQMELFKESILLFMQMVNKFE 313
Query: 125 PDILTITSVLRACTYVGNLKFGRYVYDYMVRNGYEFDIIA 6
PD+LTITSVL AC ++ +L+FG++V++YM R+ YE D A
Sbjct: 314 PDLLTITSVLCACGHLRDLEFGKFVHEYMKRSRYESDTTA 353
Score = 100 bits (248), Expect = 3e-19
Identities = 52/160 (32%), Positives = 87/160 (54%), Gaps = 1/160 (0%)
Frame = -1
Query: 485 NGFFEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIV 306
NG F AL YTQ+R ++PD + +I+ G+ VH +G ++ +
Sbjct: 93 NGLFSKALGFYTQMRKMDVLPDKYTFPSVANSCAALVDIEMGKVVHENVLDMGLGSDLYI 152
Query: 305 SNGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLY-MEMVGHF 129
N L+ MY +F L L++FN M RD V+WN++I GY +G++EE++ +Y M +
Sbjct: 153 GNALVDMYARFGCLAEALKVFNGMPERDVVSWNSLISGYSANGYWEEALEVYNMARMAGI 212
Query: 128 EPDILTITSVLRACTYVGNLKFGRYVYDYMVRNGYEFDII 9
PD T++SVL AC + ++K G V+ + + G D++
Sbjct: 213 MPDCYTVSSVLPACGGLVDVKEGEVVHCLVEKIGLHRDVV 252
Score = 73.2 bits (178), Expect = 3e-11
Identities = 40/158 (25%), Positives = 82/158 (51%), Gaps = 1/158 (0%)
Frame = -1
Query: 482 GFFEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIVS 303
G +++A++++ +++D V DS + G+K+H K+G ++I++
Sbjct: 396 GKYDEAVKLFRIMKIDSKV-DSITCVMLLSASTQLADKDLGKKIHCDVTKLGFDSDIIIN 454
Query: 302 NGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEM-VGHFE 126
N ++ MY K +++ ++IF M D V+WNTII +SG + ++L +M
Sbjct: 455 NAMIDMYAKCGQINDSMKIFEYMKTHDRVSWNTIITACVQSGDFTLGLKLIHQMRTEGLR 514
Query: 125 PDILTITSVLRACTYVGNLKFGRYVYDYMVRNGYEFDI 12
D+ TI +L C ++ + G+ ++ + R G+E D+
Sbjct: 515 ADVATILGILPMCFFLAAKRQGQEIHGCIFRLGFETDV 552
Score = 68.6 bits (166), Expect = 8e-10
Identities = 45/150 (30%), Positives = 74/150 (49%), Gaps = 1/150 (0%)
Frame = -1
Query: 485 NGFFEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIV 306
+G F L++ Q+R +GL D +QGQ++HG ++G +V V
Sbjct: 495 SGDFTLGLKLIHQMRTEGLRADVATILGILPMCFFLAAKRQGQEIHGCIFRLGFETDVPV 554
Query: 305 SNGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEM-VGHF 129
N L+ MY K L L +F+ M RD VTW T+I Y G ++++R + EM
Sbjct: 555 GNALIEMYSKCCSLTISLEVFDSMKVRDVVTWTTMISAYGMYGEGKKALRAFAEMEATGV 614
Query: 128 EPDILTITSVLRACTYVGNLKFGRYVYDYM 39
PD + +++ AC++ G ++ G +D M
Sbjct: 615 IPDHVAFVAIIYACSHSGLVEEGLASFDRM 644
Score = 66.6 bits (161), Expect = 3e-09
Identities = 40/156 (25%), Positives = 80/156 (51%)
Frame = -1
Query: 476 FEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIVSNG 297
F++++ ++ Q+ ++ PD +++ G+ VH ++ + N
Sbjct: 298 FKESILLFMQM-VNKFEPDLLTITSVLCACGHLRDLEFGKFVHEYMKRSRYESDTTADNI 356
Query: 296 LLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEMVGHFEPDI 117
L+ MY K L +F+ M+ RDSV+WN+II GY + G Y+E+++L+ M + D
Sbjct: 357 LIDMYSKCGDLLASREVFDRMICRDSVSWNSIINGYFQYGKYDEAVKLFRIMKIDSKVDS 416
Query: 116 LTITSVLRACTYVGNLKFGRYVYDYMVRNGYEFDII 9
+T +L A T + + G+ ++ + + G++ DII
Sbjct: 417 ITCVMLLSASTQLADKDLGKKIHCDVTKLGFDSDII 452
>ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 939
Score = 170 bits (430), Expect = 2e-40
Identities = 75/161 (46%), Positives = 113/161 (70%)
Frame = -1
Query: 485 NGFFEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIV 306
NGF+EDAL++Y + RM G+VPD F +++G VHG+ EK+G +VI+
Sbjct: 200 NGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVII 259
Query: 305 SNGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEMVGHFE 126
NGLLSMYFKF+ L R+F++M +DSVTWNT+ICGY + G +E S++L+M+M+ F
Sbjct: 260 GNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMIDGFV 319
Query: 125 PDILTITSVLRACTYVGNLKFGRYVYDYMVRNGYEFDIIAC 3
PD+L+ITS +RAC G+L+ G++V+ Y++ +G+E D +AC
Sbjct: 320 PDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVAC 360
Score = 99.8 bits (247), Expect = 3e-19
Identities = 57/161 (35%), Positives = 89/161 (55%), Gaps = 2/161 (1%)
Frame = -1
Query: 485 NGFFEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIV 306
NG F AL YT++R L PD+F +++ G VH A ++G ++ +
Sbjct: 99 NGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYI 158
Query: 305 SNGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLY--MEMVGH 132
N L+ MY +F L N +F EM +RDSV+WN++I GYC +GF+E+++ +Y M G
Sbjct: 159 GNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTG- 217
Query: 131 FEPDILTITSVLRACTYVGNLKFGRYVYDYMVRNGYEFDII 9
PD T++SVL AC + +K G V+ + + G D+I
Sbjct: 218 MVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVI 258
Score = 73.9 bits (180), Expect = 2e-11
Identities = 39/142 (27%), Positives = 72/142 (50%), Gaps = 1/142 (0%)
Frame = -1
Query: 461 EIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIVSNGLLSMY 282
++ ++R +GL+PD +QG+++HG K G NV + N L+ MY
Sbjct: 509 QMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMY 568
Query: 281 FKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEM-VGHFEPDILTIT 105
K L NC+++F M +D VTW +I + G +++++ + +M + PD +
Sbjct: 569 SKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFI 628
Query: 104 SVLRACTYVGNLKFGRYVYDYM 39
+ + AC++ G +K G +D M
Sbjct: 629 AFIFACSHSGMVKEGLRFFDRM 650
Score = 71.6 bits (174), Expect = 1e-10
Identities = 43/158 (27%), Positives = 81/158 (51%)
Frame = -1
Query: 482 GFFEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIVS 303
G E +++++ + +DG VPD G++Q G+ VH G + +
Sbjct: 302 GRHEASVKLFMDM-IDGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVAC 360
Query: 302 NGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEMVGHFEP 123
N L+ MY K L +F+ +DSVTWN++I GY +SG+Y+E + + M +P
Sbjct: 361 NILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMERKP 420
Query: 122 DILTITSVLRACTYVGNLKFGRYVYDYMVRNGYEFDII 9
D +T +L + + ++ GR ++ +++ G+E ++I
Sbjct: 421 DSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELI 458
Score = 67.4 bits (163), Expect = 2e-09
Identities = 38/163 (23%), Positives = 80/163 (49%), Gaps = 5/163 (3%)
Frame = -1
Query: 485 NGFFEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIV 306
+G++++ LE + ++M+ PDS +I QG+ +H K G +I+
Sbjct: 401 SGYYKEGLESFKMMKMERK-PDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELII 459
Query: 305 SNGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEMVGHFE 126
N LL +Y K + + L++F+ M D ++WNT+I S + + + +M+
Sbjct: 460 GNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIA----SSVHFDDCTVGFQMINEMR 515
Query: 125 -----PDILTITSVLRACTYVGNLKFGRYVYDYMVRNGYEFDI 12
PD T+ +L C+ + + G+ ++ Y+ ++G+E ++
Sbjct: 516 TEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNV 558
>ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 895
Score = 170 bits (430), Expect = 2e-40
Identities = 75/161 (46%), Positives = 113/161 (70%)
Frame = -1
Query: 485 NGFFEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIV 306
NGF+EDAL++Y + RM G+VPD F +++G VHG+ EK+G +VI+
Sbjct: 200 NGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVII 259
Query: 305 SNGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEMVGHFE 126
NGLLSMYFKF+ L R+F++M +DSVTWNT+ICGY + G +E S++L+M+M+ F
Sbjct: 260 GNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMIDGFV 319
Query: 125 PDILTITSVLRACTYVGNLKFGRYVYDYMVRNGYEFDIIAC 3
PD+L+ITS +RAC G+L+ G++V+ Y++ +G+E D +AC
Sbjct: 320 PDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVAC 360
Score = 99.8 bits (247), Expect = 3e-19
Identities = 57/161 (35%), Positives = 89/161 (55%), Gaps = 2/161 (1%)
Frame = -1
Query: 485 NGFFEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIV 306
NG F AL YT++R L PD+F +++ G VH A ++G ++ +
Sbjct: 99 NGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYI 158
Query: 305 SNGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLY--MEMVGH 132
N L+ MY +F L N +F EM +RDSV+WN++I GYC +GF+E+++ +Y M G
Sbjct: 159 GNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTG- 217
Query: 131 FEPDILTITSVLRACTYVGNLKFGRYVYDYMVRNGYEFDII 9
PD T++SVL AC + +K G V+ + + G D+I
Sbjct: 218 MVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVI 258
Score = 73.9 bits (180), Expect = 2e-11
Identities = 39/142 (27%), Positives = 72/142 (50%), Gaps = 1/142 (0%)
Frame = -1
Query: 461 EIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIVSNGLLSMY 282
++ ++R +GL+PD +QG+++HG K G NV + N L+ MY
Sbjct: 509 QMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMY 568
Query: 281 FKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEM-VGHFEPDILTIT 105
K L NC+++F M +D VTW +I + G +++++ + +M + PD +
Sbjct: 569 SKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFI 628
Query: 104 SVLRACTYVGNLKFGRYVYDYM 39
+ + AC++ G +K G +D M
Sbjct: 629 AFIFACSHSGMVKEGLRFFDRM 650
Score = 71.6 bits (174), Expect = 1e-10
Identities = 43/158 (27%), Positives = 81/158 (51%)
Frame = -1
Query: 482 GFFEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIVS 303
G E +++++ + +DG VPD G++Q G+ VH G + +
Sbjct: 302 GRHEASVKLFMDM-IDGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVAC 360
Query: 302 NGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEMVGHFEP 123
N L+ MY K L +F+ +DSVTWN++I GY +SG+Y+E + + M +P
Sbjct: 361 NILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMERKP 420
Query: 122 DILTITSVLRACTYVGNLKFGRYVYDYMVRNGYEFDII 9
D +T +L + + ++ GR ++ +++ G+E ++I
Sbjct: 421 DSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELI 458
Score = 67.4 bits (163), Expect = 2e-09
Identities = 38/163 (23%), Positives = 80/163 (49%), Gaps = 5/163 (3%)
Frame = -1
Query: 485 NGFFEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIV 306
+G++++ LE + ++M+ PDS +I QG+ +H K G +I+
Sbjct: 401 SGYYKEGLESFKMMKMERK-PDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELII 459
Query: 305 SNGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEMVGHFE 126
N LL +Y K + + L++F+ M D ++WNT+I S + + + +M+
Sbjct: 460 GNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIA----SSVHFDDCTVGFQMINEMR 515
Query: 125 -----PDILTITSVLRACTYVGNLKFGRYVYDYMVRNGYEFDI 12
PD T+ +L C+ + + G+ ++ Y+ ++G+E ++
Sbjct: 516 TEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNV 558
>ref|XP_004308640.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Fragaria vesca subsp. vesca]
Length = 764
Score = 164 bits (415), Expect = 1e-38
Identities = 75/160 (46%), Positives = 112/160 (70%)
Frame = -1
Query: 485 NGFFEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIV 306
NG++E+ALE++ +LRM+GLVPD F ++++G+ VHGL EK+G +V+V
Sbjct: 196 NGYWEEALEMFWRLRMEGLVPDCFSISSVLPACGSLVDVKEGRLVHGLVEKIGVNADVLV 255
Query: 305 SNGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEMVGHFE 126
SNG+L+MYFKF + F MV RD V+WNT++CGY + ++E+I L+ EM+ F
Sbjct: 256 SNGILAMYFKFGWCRDARIFFEGMVVRDCVSWNTVVCGYLQLCLFDEAISLFREMIKEFT 315
Query: 125 PDILTITSVLRACTYVGNLKFGRYVYDYMVRNGYEFDIIA 6
PD+LTITSVLRAC+++ +L +YV+ YM R+G+EFD +A
Sbjct: 316 PDLLTITSVLRACSHLRDLGLAKYVHGYMKRSGFEFDTMA 355
Score = 85.5 bits (210), Expect = 7e-15
Identities = 45/160 (28%), Positives = 83/160 (51%), Gaps = 1/160 (0%)
Frame = -1
Query: 485 NGFFEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIV 306
NG +AL Y + + PDS +++ G +H + G ++ V
Sbjct: 95 NGLHSEALRHYNAMLHTNVRPDSHTFPSVINACAALCDLEMGLVIHRRVSETGFGTDLYV 154
Query: 305 SNGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEM-VGHF 129
N L+ MY + L + ++F+EM RD V+WN++I GY +G++EE++ ++ + +
Sbjct: 155 CNALIDMYARLGELGHARQVFDEMRERDVVSWNSLISGYSSNGYWEEALEMFWRLRMEGL 214
Query: 128 EPDILTITSVLRACTYVGNLKFGRYVYDYMVRNGYEFDII 9
PD +I+SVL AC + ++K GR V+ + + G D++
Sbjct: 215 VPDCFSISSVLPACGSLVDVKEGRLVHGLVEKIGVNADVL 254
Score = 71.2 bits (173), Expect = 1e-10
Identities = 44/163 (26%), Positives = 80/163 (49%), Gaps = 5/163 (3%)
Frame = -1
Query: 485 NGFFEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIV 306
NG F++ ++ +R + PDS G++ QG+ +H K+G +++V
Sbjct: 397 NGCFDEGFNLFKMMR-NNEKPDSVSCVMILSMYTQLGQVDQGKMIHCDIVKLGFDSDIVV 455
Query: 305 SNGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEMVGHFE 126
+N L+ +Y K L + L++F+ M RD VTWN+II + F+ E L + MV
Sbjct: 456 NNVLVDLYAKCGKLQDALKVFDSMTARDIVTWNSII----SACFHNEDCSLGLRMVLRMR 511
Query: 125 P-----DILTITSVLRACTYVGNLKFGRYVYDYMVRNGYEFDI 12
D+ T+ +L C+ + + G+ ++ + R GY D+
Sbjct: 512 NEGVMLDVATMLGILPVCSLLAAKRKGQEIHGCIFRLGYHSDV 554
Score = 65.9 bits (159), Expect = 5e-09
Identities = 37/156 (23%), Positives = 79/156 (50%)
Frame = -1
Query: 476 FEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIVSNG 297
F++A+ ++ ++ + PD ++ + VHG ++ G + + +N
Sbjct: 300 FDEAISLFREMIKE-FTPDLLTITSVLRACSHLRDLGLAKYVHGYMKRSGFEFDTMANNI 358
Query: 296 LLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEMVGHFEPDI 117
+ M+ K L +F+ M RDSV+WN++I GY +G ++E L+ M + +PD
Sbjct: 359 AIDMHAKCGSLLASREVFDYMECRDSVSWNSMINGYFLNGCFDEGFNLFKMMRNNEKPDS 418
Query: 116 LTITSVLRACTYVGNLKFGRYVYDYMVRNGYEFDII 9
++ +L T +G + G+ ++ +V+ G++ DI+
Sbjct: 419 VSCVMILSMYTQLGQVDQGKMIHCDIVKLGFDSDIV 454
Score = 62.8 bits (151), Expect = 5e-08
Identities = 39/147 (26%), Positives = 73/147 (49%), Gaps = 2/147 (1%)
Frame = -1
Query: 464 LEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIVSNGLLSM 285
L + ++R +G++ D ++GQ++HG ++G +V V N L+ M
Sbjct: 504 LRMVLRMRNEGVMLDVATMLGILPVCSLLAAKRKGQEIHGCIFRLGYHSDVPVGNALIEM 563
Query: 284 YFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLY--MEMVGHFEPDILT 111
Y L +R+F +M +D VTW ++I Y G E+++ + ME G PD L
Sbjct: 564 YSSCGSLETSIRVFEQMCIKDVVTWTSLISAYGTYGEGEKALIAFQKMEATGVL-PDHLA 622
Query: 110 ITSVLRACTYVGNLKFGRYVYDYMVRN 30
+++ AC++ G ++ G +D M ++
Sbjct: 623 FLAIIYACSHSGLVEQGLAYFDRMKKH 649
>ref|XP_006408289.1| hypothetical protein EUTSA_v10020027mg [Eutrema salsugineum]
gi|557109435|gb|ESQ49742.1| hypothetical protein
EUTSA_v10020027mg [Eutrema salsugineum]
Length = 883
Score = 151 bits (381), Expect = 1e-34
Identities = 69/154 (44%), Positives = 109/154 (70%)
Frame = -1
Query: 485 NGFFEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIV 306
+G++E+AL IY +LR +VPDSF +++GQ +HG A K+G V+V
Sbjct: 185 HGYYEEALGIYHELRNSWIVPDSFTFSSVLPAFGNLVLVKEGQGLHGFALKLGVNSAVVV 244
Query: 305 SNGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEMVGHFE 126
+NGLL+MY KF + R+F+EMV RDS+++NTIICG+ S YEES+R+++E + F+
Sbjct: 245 NNGLLAMYLKFSRPTDARRVFDEMVVRDSISYNTIICGFLNSEMYEESLRMFLENLDQFK 304
Query: 125 PDILTITSVLRACTYVGNLKFGRYVYDYMVRNGY 24
PDILT++S+LRAC ++ +L+ +YV++YM+R+G+
Sbjct: 305 PDILTVSSILRACGHLRDLRLAKYVHEYMLRSGF 338
Score = 83.6 bits (205), Expect = 3e-14
Identities = 48/160 (30%), Positives = 82/160 (51%), Gaps = 1/160 (0%)
Frame = -1
Query: 485 NGFFEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIV 306
NG F ALE Y +LR + PD F + + G V+ + G ++ V
Sbjct: 84 NGLFPKALEFYGKLRETNVSPDKFTFPPVVKACAGLLDAEIGDCVYKQILESGLESDLYV 143
Query: 305 SNGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEMVGHF- 129
N L+ MY + L ++F+EM RD V+WN++I G+C G+YEE++ +Y E+ +
Sbjct: 144 GNALVDMYSRMGSLDRARQVFDEMPVRDLVSWNSLISGFCSHGYYEEALGIYHELRNSWI 203
Query: 128 EPDILTITSVLRACTYVGNLKFGRYVYDYMVRNGYEFDII 9
PD T +SVL A + +K G+ ++ + ++ G ++
Sbjct: 204 VPDSFTFSSVLPAFGNLVLVKEGQGLHGFALKLGVNSAVV 243
Score = 60.8 bits (146), Expect = 2e-07
Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
Frame = -1
Query: 374 EIQQGQKVHGLAEKVGTCRNVIVSNGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIIC 195
+++ G+ +H A K G ++ VSN L+ MY K + + L+IFN M RD+VTWNT+I
Sbjct: 424 DLKFGRGLHSNATKSGIYSDLSVSNALIDMYAKCGEVGDSLQIFNCMDTRDTVTWNTVIS 483
Query: 194 GYCESGFYEESIRLYMEM-VGHFEPDILTITSVLRACTYVGNLKFGRYVYDYMVRNGYEF 18
G + ++L +M D+ T +L C + + G+ ++ ++R GYE
Sbjct: 484 SCVCFGDFATGLQLTSQMRTSGAVLDMATFLVILPMCASLAAKRPGKEIHCCLLRFGYES 543
Query: 17 DI 12
++
Sbjct: 544 EL 545
Score = 58.5 bits (140), Expect = 9e-07
Identities = 38/157 (24%), Positives = 75/157 (47%), Gaps = 2/157 (1%)
Frame = -1
Query: 476 FEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIVSNG 297
+E++L ++ + +D PD +++ + VH + G SN
Sbjct: 289 YEESLRMFLE-NLDQFKPDILTVSSILRACGHLRDLRLAKYVHEYMLRSGFVLETTGSNI 347
Query: 296 LLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLY--MEMVGHFEP 123
L+ Y K + +F + +D+V+WN+II GY +SG E+++L+ M M+ +
Sbjct: 348 LIDAYAKCGDMIAARDVFKSIECKDTVSWNSIISGYIQSGDLLEAMKLFKMMMMIMEEQA 407
Query: 122 DILTITSVLRACTYVGNLKFGRYVYDYMVRNGYEFDI 12
D +T ++ T + +LKFGR ++ ++G D+
Sbjct: 408 DHITYVMLVSVSTRLADLKFGRGLHSNATKSGIYSDL 444
Score = 57.4 bits (137), Expect = 2e-06
Identities = 38/157 (24%), Positives = 70/157 (44%), Gaps = 1/157 (0%)
Frame = -1
Query: 482 GFFEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIVS 303
G F L++ +Q+R G V D + G+++H + G + +
Sbjct: 489 GDFATGLQLTSQMRTSGAVLDMATFLVILPMCASLAAKRPGKEIHCCLLRFGYESELPIG 548
Query: 302 NGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEM-VGHFE 126
N L+ MY K L + +F M RD VTW +I Y G E+++ + +M
Sbjct: 549 NALIEMYSKCGSLESSFSVFRHMSRRDVVTWTGMIYAYGMYGEGEKALEAFADMEKSGIV 608
Query: 125 PDILTITSVLRACTYVGNLKFGRYVYDYMVRNGYEFD 15
PD + +++ AC++ G ++ G ++ M + Y+ D
Sbjct: 609 PDHVVFIAIIYACSHSGLVEEGLACFEKM-KTHYKID 644
>ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297330236|gb|EFH60655.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 882
Score = 144 bits (364), Expect = 9e-33
Identities = 69/154 (44%), Positives = 103/154 (66%)
Frame = -1
Query: 485 NGFFEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIV 306
+G++E+ALEIY +LR +VPDSF ++QGQ +HG K G +V
Sbjct: 185 HGYYEEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVV 244
Query: 305 SNGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEMVGHFE 126
+NGLL+MY KF + R+F+EMV RDSVT+NT+ICGY + EES+++++E + F+
Sbjct: 245 NNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLENLDQFK 304
Query: 125 PDILTITSVLRACTYVGNLKFGRYVYDYMVRNGY 24
PDILT+TSVL AC ++ +L +Y+Y+YM+R G+
Sbjct: 305 PDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGF 338
Score = 87.0 bits (214), Expect = 2e-15
Identities = 47/154 (30%), Positives = 84/154 (54%), Gaps = 1/154 (0%)
Frame = -1
Query: 485 NGFFEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIV 306
NG+F ALE Y +LR + PD + + + G V+ ++G ++ V
Sbjct: 84 NGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYKQILEMGFESDLYV 143
Query: 305 SNGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEMVGHF- 129
N L+ MY + +L ++F+EM RD V+WN++I GY G+YEE++ +Y E+ +
Sbjct: 144 GNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELRNSWI 203
Query: 128 EPDILTITSVLRACTYVGNLKFGRYVYDYMVRNG 27
PD T++SVL A + +K G+ ++ + +++G
Sbjct: 204 VPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSG 237
Score = 63.2 bits (152), Expect = 4e-08
Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 1/157 (0%)
Frame = -1
Query: 482 GFFEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIVS 303
G F L++ TQ+R + +VPD + G+++H + G + +
Sbjct: 488 GDFATGLQVTTQMRKNKVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIG 547
Query: 302 NGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEM-VGHFE 126
N L+ MY K L + R+F M RD VTW +I Y G E+++ +++M
Sbjct: 548 NALIEMYSKCGCLESSFRVFERMSRRDVVTWTGMIYAYGMYGEGEKALESFVDMEKSGIV 607
Query: 125 PDILTITSVLRACTYVGNLKFGRYVYDYMVRNGYEFD 15
PD + +++ AC++ G ++ G ++ M + Y+ D
Sbjct: 608 PDSVVFIALIYACSHSGLVEKGLACFEKM-KTHYKID 643
Score = 61.6 bits (148), Expect = 1e-07
Identities = 35/122 (28%), Positives = 63/122 (51%), Gaps = 1/122 (0%)
Frame = -1
Query: 374 EIQQGQKVHGLAEKVGTCRNVIVSNGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIIC 195
+++ G+ +H K G ++ VSN L+ MY K + + L+IFN M D+VTWNT+I
Sbjct: 423 DLKFGKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGTLDTVTWNTVIS 482
Query: 194 GYCESGFYEESIRLYMEM-VGHFEPDILTITSVLRACTYVGNLKFGRYVYDYMVRNGYEF 18
G + +++ +M PD+ T L C + + G+ ++ ++R GYE
Sbjct: 483 ACVRFGDFATGLQVTTQMRKNKVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYES 542
Query: 17 DI 12
++
Sbjct: 543 EL 544
Score = 61.2 bits (147), Expect = 1e-07
Identities = 36/155 (23%), Positives = 77/155 (49%), Gaps = 1/155 (0%)
Frame = -1
Query: 473 EDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIVSNGL 294
E++++++ + +D PD ++ + ++ + G V N L
Sbjct: 290 EESVKMFLE-NLDQFKPDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNIL 348
Query: 293 LSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLY-MEMVGHFEPDI 117
+ +Y K + +FN M +D+V+WN+II GY +SG E+++L+ M M+ + D
Sbjct: 349 IDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADH 408
Query: 116 LTITSVLRACTYVGNLKFGRYVYDYMVRNGYEFDI 12
+T ++ T + +LKFG+ ++ +++G D+
Sbjct: 409 ITYLMLISLSTRLADLKFGKGLHSNGIKSGIYIDL 443
>ref|XP_006296957.1| hypothetical protein CARUB_v10012948mg [Capsella rubella]
gi|482565666|gb|EOA29855.1| hypothetical protein
CARUB_v10012948mg [Capsella rubella]
Length = 884
Score = 144 bits (362), Expect = 2e-32
Identities = 67/157 (42%), Positives = 103/157 (65%)
Frame = -1
Query: 485 NGFFEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIV 306
+G++E+ALEIY +L+ +VPDSF ++QGQ +HG K G V+V
Sbjct: 187 HGYYEEALEIYNELKKYWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFVLKSGVSSVVVV 246
Query: 305 SNGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEMVGHFE 126
NGLL+MY KF + R+F+EM RDS+++NTIICGY +E S+R+++E + F+
Sbjct: 247 DNGLLAMYLKFSRPTDARRVFDEMAVRDSISYNTIICGYLNLEMHEASVRIFLENLDQFK 306
Query: 125 PDILTITSVLRACTYVGNLKFGRYVYDYMVRNGYEFD 15
PDILT +S+LRAC ++ +L +YV+DY++R G++ D
Sbjct: 307 PDILTASSILRACGHLRDLGLAKYVHDYVLRAGFKLD 343
Score = 83.6 bits (205), Expect = 3e-14
Identities = 45/154 (29%), Positives = 84/154 (54%), Gaps = 1/154 (0%)
Frame = -1
Query: 485 NGFFEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIV 306
NG + ALE Y +LR + PD + + + G V+ ++G ++ V
Sbjct: 86 NGLYPKALEFYGKLRDSKVSPDKYTFPSVVKACAGLFDAETGDLVYEQILEMGFESDLYV 145
Query: 305 SNGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEMVGHF- 129
N L+ MY + +L ++F+ M RD V+WN++I GY G+YEE++ +Y E+ ++
Sbjct: 146 GNALVDMYSRMGLLGRARQVFDAMPVRDLVSWNSLISGYSSHGYYEEALEIYNELKKYWI 205
Query: 128 EPDILTITSVLRACTYVGNLKFGRYVYDYMVRNG 27
PD T++SVL A + +K G+ ++ +++++G
Sbjct: 206 VPDSFTVSSVLPAFANLLVVKQGQGLHGFVLKSG 239
Score = 65.9 bits (159), Expect = 5e-09
Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
Frame = -1
Query: 374 EIQQGQKVHGLAEKVGTCRNVIVSNGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIIC 195
+++ G+ +H K G ++ V N L+ MY K + + L+IFN M RD+VTWNT+I
Sbjct: 426 DLKFGRGLHSNVMKSGINFDLSVGNSLIDMYAKCGEVGDSLKIFNSMETRDTVTWNTVIS 485
Query: 194 GYCESGFYEESIRLYMEM-VGHFEPDILTITSVLRACTYVGNLKFGRYVYDYMVRNGYEF 18
SG + +++ +M PD+ T L C + + G+ ++ ++R GYE
Sbjct: 486 ACVSSGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYES 545
Query: 17 DI 12
++
Sbjct: 546 EL 547
Score = 63.5 bits (153), Expect = 3e-08
Identities = 41/158 (25%), Positives = 74/158 (46%), Gaps = 1/158 (0%)
Frame = -1
Query: 485 NGFFEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIV 306
+G F L++ TQ+R +VPD + G+++H + G + V
Sbjct: 490 SGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQV 549
Query: 305 SNGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEM-VGHF 129
N L+ MY K L + R+F M RD VTW +I Y G E++++ + +M
Sbjct: 550 GNALIEMYSKCGCLESSFRVFAHMSRRDIVTWTGMIYAYGMYGEGEKALKTFADMEKSGI 609
Query: 128 EPDILTITSVLRACTYVGNLKFGRYVYDYMVRNGYEFD 15
PD + +++ AC++ G ++ G ++ M + Y+ D
Sbjct: 610 VPDNVVFIAIIYACSHSGLVEEGLACFEKM-KTHYKID 646
Score = 63.2 bits (152), Expect = 4e-08
Identities = 38/156 (24%), Positives = 77/156 (49%), Gaps = 2/156 (1%)
Frame = -1
Query: 473 EDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIVSNGL 294
E ++ I+ + +D PD ++ + VH + G + V N L
Sbjct: 292 EASVRIFLE-NLDQFKPDILTASSILRACGHLRDLGLAKYVHDYVLRAGFKLDTTVKNIL 350
Query: 293 LSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLY--MEMVGHFEPD 120
+ +Y K + +F M +D+V+WN+II GY ++G E+++L+ M ++ + D
Sbjct: 351 IDVYAKCADMVTARDVFKSMECKDTVSWNSIISGYIQNGDLSEAMKLFRLMMIIMEEQAD 410
Query: 119 ILTITSVLRACTYVGNLKFGRYVYDYMVRNGYEFDI 12
+T ++ T + +LKFGR ++ ++++G FD+
Sbjct: 411 HITYLMLISVSTRLADLKFGRGLHSNVMKSGINFDL 446
>ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g03580 gi|6091764|gb|AAF03474.1|AC009327_13
hypothetical protein [Arabidopsis thaliana]
gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis
thaliana] gi|29824355|gb|AAP04138.1| unknown protein
[Arabidopsis thaliana] gi|332640438|gb|AEE73959.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 882
Score = 142 bits (357), Expect = 6e-32
Identities = 66/154 (42%), Positives = 105/154 (68%)
Frame = -1
Query: 485 NGFFEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIV 306
+G++E+ALEIY +L+ +VPDSF ++QGQ +HG A K G V+V
Sbjct: 185 HGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVV 244
Query: 305 SNGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEMVGHFE 126
+NGL++MY KF + R+F+EM RDSV++NT+ICGY + EES+R+++E + F+
Sbjct: 245 NNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFK 304
Query: 125 PDILTITSVLRACTYVGNLKFGRYVYDYMVRNGY 24
PD+LT++SVLRAC ++ +L +Y+Y+YM++ G+
Sbjct: 305 PDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGF 338
Score = 86.7 bits (213), Expect = 3e-15
Identities = 47/154 (30%), Positives = 83/154 (53%), Gaps = 1/154 (0%)
Frame = -1
Query: 485 NGFFEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIV 306
NG F +ALE Y +LR + PD + + + G V+ +G ++ V
Sbjct: 84 NGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFV 143
Query: 305 SNGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEMVGHF- 129
N L+ MY + +L ++F+EM RD V+WN++I GY G+YEE++ +Y E+ +
Sbjct: 144 GNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWI 203
Query: 128 EPDILTITSVLRACTYVGNLKFGRYVYDYMVRNG 27
PD T++SVL A + +K G+ ++ + +++G
Sbjct: 204 VPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSG 237
Score = 64.3 bits (155), Expect = 2e-08
Identities = 35/122 (28%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
Frame = -1
Query: 374 EIQQGQKVHGLAEKVGTCRNVIVSNGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIIC 195
+++ G+ +H K G C ++ VSN L+ MY K + + L+IF+ M D+VTWNT+I
Sbjct: 423 DLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVIS 482
Query: 194 GYCESGFYEESIRLYMEM-VGHFEPDILTITSVLRACTYVGNLKFGRYVYDYMVRNGYEF 18
G + +++ +M PD+ T L C + + G+ ++ ++R GYE
Sbjct: 483 ACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYES 542
Query: 17 DI 12
++
Sbjct: 543 EL 544
Score = 63.5 bits (153), Expect = 3e-08
Identities = 41/157 (26%), Positives = 71/157 (45%), Gaps = 1/157 (0%)
Frame = -1
Query: 482 GFFEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIVS 303
G F L++ TQ+R +VPD + G+++H + G + +
Sbjct: 488 GDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIG 547
Query: 302 NGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEM-VGHFE 126
N L+ MY K L N R+F M RD VTW +I Y G E+++ + +M
Sbjct: 548 NALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIV 607
Query: 125 PDILTITSVLRACTYVGNLKFGRYVYDYMVRNGYEFD 15
PD + +++ AC++ G + G ++ M + Y+ D
Sbjct: 608 PDSVVFIAIIYACSHSGLVDEGLACFEKM-KTHYKID 643
Score = 61.2 bits (147), Expect = 1e-07
Identities = 37/155 (23%), Positives = 76/155 (49%), Gaps = 1/155 (0%)
Frame = -1
Query: 473 EDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIVSNGL 294
E+++ ++ + +D PD ++ + ++ K G V N L
Sbjct: 290 EESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNIL 348
Query: 293 LSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLY-MEMVGHFEPDI 117
+ +Y K + +FN M +D+V+WN+II GY +SG E+++L+ M M+ + D
Sbjct: 349 IDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADH 408
Query: 116 LTITSVLRACTYVGNLKFGRYVYDYMVRNGYEFDI 12
+T ++ T + +LKFG+ ++ +++G D+
Sbjct: 409 ITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDL 443
>emb|CBI39966.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 131 bits (330), Expect = 8e-29
Identities = 62/167 (37%), Positives = 102/167 (61%), Gaps = 7/167 (4%)
Frame = -1
Query: 485 NGFFEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIV 306
NG F +AL +Y++ + L PD++ + + + +H +G ++ +
Sbjct: 93 NGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYI 152
Query: 305 SNGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEE-------SIRLYM 147
N L+ MY +F+ L ++F EM RD V+WN++I GY +G++ E SI+L+M
Sbjct: 153 GNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYQSIKLFM 212
Query: 146 EMVGHFEPDILTITSVLRACTYVGNLKFGRYVYDYMVRNGYEFDIIA 6
EMV F+PD+LTITS+L+AC ++G+L+FG+YV+DYM+ +GYE D A
Sbjct: 213 EMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTA 259
Score = 63.2 bits (152), Expect = 4e-08
Identities = 38/146 (26%), Positives = 71/146 (48%), Gaps = 1/146 (0%)
Frame = -1
Query: 464 LEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIVSNGLLSM 285
L + +++R +G+ PD +QG+++HG K+G +V V N L+ M
Sbjct: 339 LRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEM 398
Query: 284 YFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEM-VGHFEPDILTI 108
Y K L N ++F M +D VTW +I G ++++R + EM PD +
Sbjct: 399 YSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAF 458
Query: 107 TSVLRACTYVGNLKFGRYVYDYMVRN 30
+++ AC++ G ++ G + M ++
Sbjct: 459 VAIIFACSHSGLVEEGLNYFHRMKKD 484
Score = 56.6 bits (135), Expect = 3e-06
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 6/164 (3%)
Frame = -1
Query: 485 NGFFEDALEIYTQL------RMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGT 324
NG++ +ALEIY Q ++ PD G+++ G+ VH G
Sbjct: 194 NGYWNEALEIYYQSIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGY 253
Query: 323 CRNVIVSNGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYME 144
+ SN L++MY K L +F+ M +DSV+WN++I Y ++G +S++++
Sbjct: 254 ECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFEN 313
Query: 143 MVGHFEPDILTITSVLRACTYVGNLKFGRYVYDYMVRNGYEFDI 12
M DI+T +++ +C + + G + M G D+
Sbjct: 314 MKAR---DIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDM 354
>gb|ESW29114.1| hypothetical protein PHAVU_002G044500g [Phaseolus vulgaris]
Length = 713
Score = 108 bits (269), Expect = 1e-21
Identities = 54/154 (35%), Positives = 85/154 (55%), Gaps = 1/154 (0%)
Frame = -1
Query: 473 EDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIVSNGL 294
E L +Y LR +G + D F + G +VHGLA K+G + + L
Sbjct: 89 ESTLRLYRLLRRNGTLLDRFSFPPLLKAVSKLSALNMGLEVHGLASKLGFHDDPFIETAL 148
Query: 293 LSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEMVGH-FEPDI 117
++MY + + +F++M HRD VTWN +I GY +SG Y+ +RLY EM G EPD
Sbjct: 149 IAMYAACGRIMDARLVFDKMSHRDVVTWNIMIDGYSQSGHYDHVLRLYEEMKGSGMEPDS 208
Query: 116 LTITSVLRACTYVGNLKFGRYVYDYMVRNGYEFD 15
+ + +VL AC + GNL +G+ +++++ NG+ D
Sbjct: 209 IILCTVLSACGHAGNLSYGKAIHEFIKDNGFRVD 242
Score = 77.8 bits (190), Expect = 1e-12
Identities = 48/186 (25%), Positives = 86/186 (46%), Gaps = 32/186 (17%)
Frame = -1
Query: 485 NGFFEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVH-------------- 348
+G ++ L +Y +++ G+ PDS G + G+ +H
Sbjct: 186 SGHYDHVLRLYEEMKGSGMEPDSIILCTVLSACGHAGNLSYGKAIHEFIKDNGFRVDSHL 245
Query: 347 --GLAEKVGTC---------------RNVIVSNGLLSMYFKFDMLHNCLRIFNEMVHRDS 219
L C ++++VS +LS Y K ++ + IF+++V +D
Sbjct: 246 QTALVNMYANCGAMYLAREVYDKLPSKHLVVSTAMLSGYAKIGLVEDARFIFDQIVDKDL 305
Query: 218 VTWNTIICGYCESGFYEESIRLYMEMV-GHFEPDILTITSVLRACTYVGNLKFGRYVYDY 42
V W+ +I GY ES +E++RL+ EM PD +T+ SV+ AC +VG L R+++ Y
Sbjct: 306 VCWSAMISGYAESDQPQEALRLFNEMQRQRIVPDQITMLSVISACAHVGALVKARWIHSY 365
Query: 41 MVRNGY 24
+NG+
Sbjct: 366 ADKNGF 371
Score = 63.9 bits (154), Expect = 2e-08
Identities = 35/147 (23%), Positives = 74/147 (50%), Gaps = 1/147 (0%)
Frame = -1
Query: 473 EDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIVSNGL 294
++AL ++ +++ +VPD G + + + +H A+K G R + ++N L
Sbjct: 322 QEALRLFNEMQRQRIVPDQITMLSVISACAHVGALVKARWIHSYADKNGFGRALPINNAL 381
Query: 293 LSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEM-VGHFEPDI 117
+ MY K L +F M ++ ++W+++I + G + +I L+ M V + EP+
Sbjct: 382 IDMYAKCGNLARAREVFENMPRKNVISWSSMINAFAIHGDADSAIALFHRMKVQNIEPNG 441
Query: 116 LTITSVLRACTYVGNLKFGRYVYDYMV 36
+T +L AC++ G + G+ + M+
Sbjct: 442 VTFIGLLYACSHAGLVDEGQKFFSSMI 468
>ref|XP_006833054.1| hypothetical protein AMTR_s00170p00032020 [Amborella trichopoda]
gi|548837647|gb|ERM98332.1| hypothetical protein
AMTR_s00170p00032020 [Amborella trichopoda]
Length = 752
Score = 106 bits (264), Expect = 4e-21
Identities = 53/155 (34%), Positives = 87/155 (56%), Gaps = 1/155 (0%)
Frame = -1
Query: 485 NGFFEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIV 306
NGF E AL ++ R G+ PDS+ + QG+ +H L + G ++ V
Sbjct: 124 NGFHEQALALFYNKRAAGMKPDSYTFSCVLKACALLSDRNQGKVLHDLVRESGLEEDLFV 183
Query: 305 SNGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEMV-GHF 129
SN LLSM+ + + +++FN+M RD ++WN+II GY E GF++E++ + +M+ +
Sbjct: 184 SNSLLSMFCRCGRFEHAIQLFNKMPERDRISWNSIITGYIEHGFFDEAMEMLQKMIESGY 243
Query: 128 EPDILTITSVLRACTYVGNLKFGRYVYDYMVRNGY 24
+PD +TI S L C L GR ++ Y +RNG+
Sbjct: 244 KPDSVTILSALAGCP----LALGREIHGYAIRNGF 274
Score = 77.4 bits (189), Expect = 2e-12
Identities = 42/149 (28%), Positives = 78/149 (52%), Gaps = 1/149 (0%)
Frame = -1
Query: 470 DALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIVSNGLL 291
DAL I+TQ+ GL+PD+ Q++H + ++ + N L+
Sbjct: 362 DALRIFTQMLDLGLIPDAVTITSILPSCSDLQFFDYCQEIHAYTYRHSLETDIRIRNALI 421
Query: 290 SMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEMVG-HFEPDIL 114
S+Y K + +IF ++ RD ++W+T+I GY ++G + E+I + +M P+ +
Sbjct: 422 SVYSKCKSIQRAHQIFTQIFERDVISWSTMIAGYAQNGHHNEAINTFRDMCNTKTTPNPI 481
Query: 113 TITSVLRACTYVGNLKFGRYVYDYMVRNG 27
TITSVL A +LK G+ ++ + +++G
Sbjct: 482 TITSVLSAFAQTSSLKPGKELHLHALKHG 510
Score = 70.1 bits (170), Expect = 3e-10
Identities = 50/194 (25%), Positives = 83/194 (42%), Gaps = 36/194 (18%)
Frame = -1
Query: 485 NGFFEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIV 306
+GFF++A+E+ ++ G PDS + G+++HG A + G V
Sbjct: 225 HGFFDEAMEMLQKMIESGYKPDSVTILSALAGCP----LALGREIHGYAIRNGFHSTFRV 280
Query: 305 SNGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEM----- 141
N L+SMY K +F + +D V WN +I GY ++GF++ES+ L EM
Sbjct: 281 RNSLVSMYGKCGRNDYANILFRNSIKKDKVAWNALISGYAQNGFFDESLALLHEMRLTGC 340
Query: 140 ----------VGHFE---------------------PDILTITSVLRACTYVGNLKFGRY 54
+ F PD +TITS+L +C+ + + +
Sbjct: 341 HCDTITYSGIISAFSQNDRPHDALRIFTQMLDLGLIPDAVTITSILPSCSDLQFFDYCQE 400
Query: 53 VYDYMVRNGYEFDI 12
++ Y R+ E DI
Sbjct: 401 IHAYTYRHSLETDI 414
Score = 56.2 bits (134), Expect = 4e-06
Identities = 34/147 (23%), Positives = 68/147 (46%)
Frame = -1
Query: 485 NGFFEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIV 306
NG +A+ + + P+ ++ G+++H A K G + V
Sbjct: 458 NGHHNEAINTFRDMCNTKTTPNPITITSVLSAFAQTSSLKPGKELHLHALKHGLSDHTYV 517
Query: 305 SNGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEMVGHFE 126
+ L+ MY K + RIF+ + R+ V+WN +I Y G +++ L+ ++ +
Sbjct: 518 GSALIDMYSKCGKIEESRRIFDRISERNLVSWNAMILAYAIHGQGGKALALFKKVE---K 574
Query: 125 PDILTITSVLRACTYVGNLKFGRYVYD 45
PD +T S+L AC++ G + G +++
Sbjct: 575 PDHVTFLSILSACSHGGLVDQGTEIFN 601
>ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 617
Score = 103 bits (258), Expect = 2e-20
Identities = 50/148 (33%), Positives = 87/148 (58%), Gaps = 1/148 (0%)
Frame = -1
Query: 470 DALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIVSNGLL 291
+ L +Y Q+ G+VPD++ +++G++VHG A K+G +V VSN L+
Sbjct: 108 EGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREGEEVHGQAIKMGLASDVYVSNTLM 167
Query: 290 SMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEMVG-HFEPDIL 114
MY D++ + ++F+ RD V+W T+I GY + GF E + L+ EM G + + D +
Sbjct: 168 RMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGFAREGVGLFFEMCGENLQADGM 227
Query: 113 TITSVLRACTYVGNLKFGRYVYDYMVRN 30
T+ VL +C +G+L+ GR ++ Y++RN
Sbjct: 228 TLVIVLSSCARLGDLRLGRKLHRYIIRN 255
Score = 71.6 bits (174), Expect = 1e-10
Identities = 42/159 (26%), Positives = 84/159 (52%), Gaps = 3/159 (1%)
Frame = -1
Query: 482 GFFEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHG-LAEKVGTCRNVIV 306
GF + + ++ ++ + L D G+++ G+K+H + +V V
Sbjct: 205 GFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIRNSNVNLDVFV 264
Query: 305 SNGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLY--MEMVGH 132
N L+ MY K + ++F EM ++ V+WN++I G + G ++ES+ ++ M+ +G
Sbjct: 265 GNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLG- 323
Query: 131 FEPDILTITSVLRACTYVGNLKFGRYVYDYMVRNGYEFD 15
+PD +T+ +VL +C +G L+ G++V+ Y+ RN D
Sbjct: 324 VKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRAD 362
Score = 57.0 bits (136), Expect = 3e-06
Identities = 37/149 (24%), Positives = 71/149 (47%), Gaps = 1/149 (0%)
Frame = -1
Query: 482 GFFEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIVS 303
G F+++L ++ +++ G+ PD G ++ G+ VH ++ + +
Sbjct: 307 GQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIG 366
Query: 302 NGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEMVG-HFE 126
N L+ MY K + +F M +D ++ +I G G +++ L+ EM E
Sbjct: 367 NALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIE 426
Query: 125 PDILTITSVLRACTYVGNLKFGRYVYDYM 39
PD +T VL AC++VG ++ GR ++ M
Sbjct: 427 PDEVTFVGVLTACSHVGLVEEGRKYFEDM 455
>ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera] gi|297737070|emb|CBI26271.3| unnamed
protein product [Vitis vinifera]
Length = 727
Score = 103 bits (258), Expect = 2e-20
Identities = 51/154 (33%), Positives = 85/154 (55%), Gaps = 1/154 (0%)
Frame = -1
Query: 473 EDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIVSNGL 294
E L +Y ++R GL D F + +G ++HGLA K+G + V GL
Sbjct: 104 EKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGL 163
Query: 293 LSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEMVGH-FEPDI 117
+ MY + +F++M HRD VTW+ +I GYC+SG + +++ L+ EM + EPD
Sbjct: 164 VRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDE 223
Query: 116 LTITSVLRACTYVGNLKFGRYVYDYMVRNGYEFD 15
+ +++VL AC GNL +G+ ++D+++ N D
Sbjct: 224 MMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVD 257
Score = 74.3 bits (181), Expect = 2e-11
Identities = 46/187 (24%), Positives = 87/187 (46%), Gaps = 33/187 (17%)
Frame = -1
Query: 485 NGFFEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVH-------------- 348
+G F DAL ++ +++ + PD G + G+ +H
Sbjct: 201 SGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHL 260
Query: 347 ------------------GLAEKVGTCRNVIVSNGLLSMYFKFDMLHNCLRIFNEMVHRD 222
L EK+ T +N++ S +++ Y K + N +FN+MV +D
Sbjct: 261 QSALVTMYASCGSMDLALNLFEKM-TPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKD 319
Query: 221 SVTWNTIICGYCESGFYEESIRLYMEMVG-HFEPDILTITSVLRACTYVGNLKFGRYVYD 45
V W+ +I GY ES +E++ L+ EM +PD +T+ SV+ AC ++G L ++++
Sbjct: 320 LVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHL 379
Query: 44 YMVRNGY 24
++ +NG+
Sbjct: 380 FVDKNGF 386
Score = 65.9 bits (159), Expect = 5e-09
Identities = 36/147 (24%), Positives = 74/147 (50%), Gaps = 1/147 (0%)
Frame = -1
Query: 473 EDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIVSNGL 294
++AL ++ +++ G+ PD G + Q + +H +K G + ++N L
Sbjct: 337 QEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPINNAL 396
Query: 293 LSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEMVG-HFEPDI 117
+ MY K L RIF++M ++ ++W +I + G ++R + +M + EP+
Sbjct: 397 IEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDENIEPNG 456
Query: 116 LTITSVLRACTYVGNLKFGRYVYDYMV 36
+T VL AC++ G ++ GR ++ M+
Sbjct: 457 ITFVGVLYACSHAGLVEEGRKIFYSMI 483
>ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like, partial [Cucumis sativus]
Length = 735
Score = 102 bits (255), Expect = 4e-20
Identities = 53/150 (35%), Positives = 82/150 (54%), Gaps = 2/150 (1%)
Frame = -1
Query: 482 GFFEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIVS 303
G L ++ QLR DGL PD F +++QG+KV G K G + V
Sbjct: 176 GILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIVKTGMDLDNYVY 235
Query: 302 NGLLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLYMEM--VGHF 129
N L+ MY++ + N ++F+EM RDSV+WN +I GY +E++I + EM G+
Sbjct: 236 NSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINTFREMQQEGNE 295
Query: 128 EPDILTITSVLRACTYVGNLKFGRYVYDYM 39
+PD T+ S L ACT + NL+ G +++Y+
Sbjct: 296 KPDEATVVSTLSACTALKNLELGDEIHNYV 325
Score = 84.7 bits (208), Expect = 1e-14
Identities = 46/148 (31%), Positives = 82/148 (55%), Gaps = 2/148 (1%)
Frame = -1
Query: 476 FEDALEIYTQLRMDGLVPDSFXXXXXXXXXXXXGEIQQGQKVHGLAEKVGTCRNVIVSNG 297
F+DA+ ++ ++++ + PD F G ++QG+ +HG ++ +V+V
Sbjct: 411 FDDAVALFREMQIQKIKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTA 470
Query: 296 LLSMYFKFDMLHNCLRIFNEMVHRDSVTWNTIICGYCESGFYEESIRLY--MEMVGHFEP 123
L+ MY K + L IF E+ +D+ +W +IICG +G E++RL+ ME VG +P
Sbjct: 471 LIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVG-AKP 529
Query: 122 DILTITSVLRACTYVGNLKFGRYVYDYM 39
D +T VL AC++ G ++ GR ++ M
Sbjct: 530 DDITFIGVLSACSHGGLVEEGRRFFNSM 557
Score = 60.1 bits (144), Expect = 3e-07
Identities = 43/190 (22%), Positives = 79/190 (41%), Gaps = 34/190 (17%)
Frame = -1
Query: 476 FEDALEIYTQLRMDGLV-PDSFXXXXXXXXXXXXGEIQQGQKVHGLAEK-VGTCRNVIVS 303
FEDA+ + +++ +G PD ++ G ++H K +G +
Sbjct: 279 FEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKELGFTTRI--D 336
Query: 302 NGLLSMYFKFDMLHNCLRIFNEMVH-------------------------------RDSV 216
N LL MY K L+ IF+EM RD V
Sbjct: 337 NALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVV 396
Query: 215 TWNTIICGYCESGFYEESIRLYMEM-VGHFEPDILTITSVLRACTYVGNLKFGRYVYDYM 39
W +I GY + +++++ L+ EM + +PD T+ ++L C +G L+ G++++ Y+
Sbjct: 397 LWTAMINGYVQFHHFDDAVALFREMQIQKIKPDKFTVVTLLTGCAQLGALEQGKWIHGYL 456
Query: 38 VRNGYEFDII 9
N D++
Sbjct: 457 DENRITMDVV 466