BLASTX nr result
ID: Rehmannia23_contig00019858
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00019858
(599 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS74396.1| hypothetical protein M569_00359, partial [Genlise... 86 6e-20
ref|XP_004516902.1| PREDICTED: uncharacterized protein LOC101497... 63 2e-10
ref|YP_008815228.1| ribosomal protein S12 (chloroplast) [Kalopan... 71 3e-10
ref|YP_008815183.1| ribosomal protein S12 (chloroplast) [Kalopan... 71 3e-10
ref|YP_008815054.1| ribosomal protein S12 (chloroplast) [Metapan... 71 3e-10
ref|YP_008815009.1| ribosomal protein S12 (chloroplast) [Metapan... 71 3e-10
ref|YP_008814967.1| ribosomal protein S12 (chloroplast) [Brassai... 71 3e-10
ref|YP_008814922.1| ribosomal protein S12 (chloroplast) [Brassai... 71 3e-10
gb|AGZ19166.1| ribosomal protein S12 (chloroplast) [Camellia sin... 68 2e-09
ref|YP_008816226.1| ribosomal protein S12 (chloroplast) [Glycine... 64 2e-08
ref|XP_004516896.1| PREDICTED: 30S ribosomal protein S12, chloro... 64 2e-08
gb|AEQ36962.1| ribosomal protein S12 (chloroplast) [Datura stram... 64 2e-08
ref|YP_004940490.1| rps12 gene product (chloroplast) [Boea hygro... 64 2e-08
ref|YP_001381684.1| ribosomal protein S12 [Medicago truncatula] 64 2e-08
ref|YP_008592664.1| ribosomal protein S12 (chloroplast) [Berberi... 64 4e-08
gb|ABX26257.1| ribosomal protein S12-like protein [Panax quinque... 63 5e-08
gb|AFK38361.1| unknown [Medicago truncatula] 62 1e-07
gb|ESW29688.1| hypothetical protein PHAVU_002G090400g [Phaseolus... 60 6e-07
ref|XP_003605595.1| 30S ribosomal protein S12 [Medicago truncatu... 59 8e-07
emb|CCQ71644.1| ribosomal protein S12 (chloroplast) [Salvia milt... 59 1e-06
>gb|EPS74396.1| hypothetical protein M569_00359, partial [Genlisea aurea]
Length = 106
Score = 86.3 bits (212), Expect(3) = 6e-20
Identities = 39/43 (90%), Positives = 40/43 (93%)
Frame = +2
Query: 470 KAGFLLFFVSAHDLNESHIHPSTCSSTLRTSPKRGGFRDISNW 598
K G L+FFVSAHDLNESHIHPSTCSSTLRTSPK GGFRDISNW
Sbjct: 46 KPGLLVFFVSAHDLNESHIHPSTCSSTLRTSPKGGGFRDISNW 88
Score = 28.9 bits (63), Expect(3) = 6e-20
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 340 IGFAPMETINFIHNRGTNLIIF 405
IGFAPM+TI FIH +++F
Sbjct: 1 IGFAPMKTIRFIHISSYLVLVF 22
Score = 28.5 bits (62), Expect(3) = 6e-20
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +3
Query: 399 YF*IVNGIPSSILSYSMVLIIQTGK 473
+F IVNG+ SS L YS+ II +GK
Sbjct: 22 FFLIVNGVRSSCLCYSLRHIIPSGK 46
>ref|XP_004516902.1| PREDICTED: uncharacterized protein LOC101497522 [Cicer arietinum]
Length = 87
Score = 63.2 bits (152), Expect(2) = 2e-10
Identities = 28/40 (70%), Positives = 31/40 (77%)
Frame = -3
Query: 222 NGLRGSATQLTFIIKYRYCIGGSHCERPVTG*FMGRAKEC 103
NGLRGS TQL FI+KYRYCI CERP+T FMGRA +C
Sbjct: 37 NGLRGSTTQLIFILKYRYCIARFRCERPITRYFMGRAHKC 76
Score = 28.1 bits (61), Expect(2) = 2e-10
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -2
Query: 316 NSPLVANGYPLSGENLI 266
N PLV N YPLSG+N I
Sbjct: 8 NFPLVTNSYPLSGKNPI 24
>ref|YP_008815228.1| ribosomal protein S12 (chloroplast) [Kalopanax septemlobus]
gi|458599672|gb|AGG39364.1| ribosomal protein S12
(chloroplast) [Kalopanax septemlobus]
Length = 142
Score = 70.9 bits (172), Expect = 3e-10
Identities = 34/39 (87%), Positives = 36/39 (92%)
Frame = -2
Query: 598 PIRNVTKSPALRGCPQRRGTCTRVYVRLV*IMS*HKKKQ 482
PIRNVTKSPALRGCPQRRGTCTRVYVRLV IMS K+K+
Sbjct: 14 PIRNVTKSPALRGCPQRRGTCTRVYVRLVQIMSWDKRKK 52
>ref|YP_008815183.1| ribosomal protein S12 (chloroplast) [Kalopanax septemlobus]
gi|458599659|gb|AGG39351.1| ribosomal protein S12
(chloroplast) [Kalopanax septemlobus]
Length = 143
Score = 70.9 bits (172), Expect = 3e-10
Identities = 34/39 (87%), Positives = 36/39 (92%)
Frame = -2
Query: 598 PIRNVTKSPALRGCPQRRGTCTRVYVRLV*IMS*HKKKQ 482
PIRNVTKSPALRGCPQRRGTCTRVYVRLV IMS K+K+
Sbjct: 14 PIRNVTKSPALRGCPQRRGTCTRVYVRLVQIMSWDKRKK 52
>ref|YP_008815054.1| ribosomal protein S12 (chloroplast) [Metapanax delavayi]
gi|458599431|gb|AGG39190.1| ribosomal protein S12
(chloroplast) [Metapanax delavayi]
Length = 161
Score = 70.9 bits (172), Expect = 3e-10
Identities = 34/39 (87%), Positives = 36/39 (92%)
Frame = -2
Query: 598 PIRNVTKSPALRGCPQRRGTCTRVYVRLV*IMS*HKKKQ 482
PIRNVTKSPALRGCPQRRGTCTRVYVRLV IMS K+K+
Sbjct: 14 PIRNVTKSPALRGCPQRRGTCTRVYVRLVQIMSWDKRKK 52
>ref|YP_008815009.1| ribosomal protein S12 (chloroplast) [Metapanax delavayi]
gi|458599418|gb|AGG39177.1| ribosomal protein S12
(chloroplast) [Metapanax delavayi]
Length = 165
Score = 70.9 bits (172), Expect = 3e-10
Identities = 34/39 (87%), Positives = 36/39 (92%)
Frame = -2
Query: 598 PIRNVTKSPALRGCPQRRGTCTRVYVRLV*IMS*HKKKQ 482
PIRNVTKSPALRGCPQRRGTCTRVYVRLV IMS K+K+
Sbjct: 14 PIRNVTKSPALRGCPQRRGTCTRVYVRLVQIMSWDKRKK 52
>ref|YP_008814967.1| ribosomal protein S12 (chloroplast) [Brassaiopsis hainla]
gi|558603148|ref|YP_008815141.1| ribosomal protein S12
(chloroplast) [Schefflera delavayi]
gi|563940339|ref|YP_008814880.1| ribosomal protein S12
(chloroplast) [Aralia undulata]
gi|458599150|gb|AGG39016.1| ribosomal protein S12
(chloroplast) [Aralia undulata]
gi|458599252|gb|AGG39103.1| ribosomal protein S12
(chloroplast) [Brassaiopsis hainla]
gi|458599584|gb|AGG39277.1| ribosomal protein S12
(chloroplast) [Schefflera delavayi]
Length = 149
Score = 70.9 bits (172), Expect = 3e-10
Identities = 34/39 (87%), Positives = 36/39 (92%)
Frame = -2
Query: 598 PIRNVTKSPALRGCPQRRGTCTRVYVRLV*IMS*HKKKQ 482
PIRNVTKSPALRGCPQRRGTCTRVYVRLV IMS K+K+
Sbjct: 14 PIRNVTKSPALRGCPQRRGTCTRVYVRLVQIMSWDKRKK 52
>ref|YP_008814922.1| ribosomal protein S12 (chloroplast) [Brassaiopsis hainla]
gi|558603135|ref|YP_008815096.1| ribosomal protein S12
(chloroplast) [Schefflera delavayi]
gi|563940326|ref|YP_008814835.1| ribosomal protein S12
(chloroplast) [Aralia undulata]
gi|458599137|gb|AGG39003.1| ribosomal protein S12
(chloroplast) [Aralia undulata]
gi|458599239|gb|AGG39090.1| ribosomal protein S12
(chloroplast) [Brassaiopsis hainla]
gi|458599571|gb|AGG39264.1| ribosomal protein S12
(chloroplast) [Schefflera delavayi]
Length = 150
Score = 70.9 bits (172), Expect = 3e-10
Identities = 34/39 (87%), Positives = 36/39 (92%)
Frame = -2
Query: 598 PIRNVTKSPALRGCPQRRGTCTRVYVRLV*IMS*HKKKQ 482
PIRNVTKSPALRGCPQRRGTCTRVYVRLV IMS K+K+
Sbjct: 14 PIRNVTKSPALRGCPQRRGTCTRVYVRLVQIMSWDKRKK 52
>gb|AGZ19166.1| ribosomal protein S12 (chloroplast) [Camellia sinensis]
Length = 60
Score = 68.2 bits (165), Expect = 2e-09
Identities = 33/43 (76%), Positives = 35/43 (81%)
Frame = -2
Query: 598 PIRNVTKSPALRGCPQRRGTCTRVYVRLV*IMS*HKKKQETRF 470
PIRNVTKSPAL GCPQRRGTCTRVYVRLV IM K K+ +F
Sbjct: 14 PIRNVTKSPALGGCPQRRGTCTRVYVRLVQIMGWDKTKERKQF 56
>ref|YP_008816226.1| ribosomal protein S12 (chloroplast) [Glycine soja]
gi|558604199|ref|YP_008816270.1| ribosomal protein S12
(chloroplast) [Glycine soja] gi|557469752|gb|AHA04005.1|
ribosomal protein S12 (chloroplast) [Glycine soja]
gi|557469791|gb|AHA04044.1| ribosomal protein S12
(chloroplast) [Glycine soja]
Length = 127
Score = 64.3 bits (155), Expect = 2e-08
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = -2
Query: 598 PIRNVTKSPALRGCPQRRGTCTRVYVRLV 512
PIRNVTKSPALRGCPQRRGTCTRVYVRLV
Sbjct: 14 PIRNVTKSPALRGCPQRRGTCTRVYVRLV 42
>ref|XP_004516896.1| PREDICTED: 30S ribosomal protein S12, chloroplastic-like [Cicer
arietinum] gi|502181875|ref|XP_004516900.1| PREDICTED:
30S ribosomal protein S12, chloroplastic-like [Cicer
arietinum]
Length = 42
Score = 64.3 bits (155), Expect = 2e-08
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = -2
Query: 598 PIRNVTKSPALRGCPQRRGTCTRVYVRLV 512
PIRNVTKSPALRGCPQRRGTCTRVYVRLV
Sbjct: 14 PIRNVTKSPALRGCPQRRGTCTRVYVRLV 42
>gb|AEQ36962.1| ribosomal protein S12 (chloroplast) [Datura stramonium]
Length = 122
Score = 64.3 bits (155), Expect = 2e-08
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = -2
Query: 598 PIRNVTKSPALRGCPQRRGTCTRVYVRLV 512
PIRNVTKSPALRGCPQRRGTCTRVYVRLV
Sbjct: 14 PIRNVTKSPALRGCPQRRGTCTRVYVRLV 42
>ref|YP_004940490.1| rps12 gene product (chloroplast) [Boea hygrometrica]
gi|340549431|gb|AEK53253.1| ribosomal protein S12
(chloroplast) [Boea hygrometrica]
Length = 134
Score = 64.3 bits (155), Expect = 2e-08
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = -2
Query: 598 PIRNVTKSPALRGCPQRRGTCTRVYVRLV 512
PIRNVTKSPALRGCPQRRGTCTRVYVRLV
Sbjct: 14 PIRNVTKSPALRGCPQRRGTCTRVYVRLV 42
>ref|YP_001381684.1| ribosomal protein S12 [Medicago truncatula]
Length = 127
Score = 64.3 bits (155), Expect = 2e-08
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = -2
Query: 598 PIRNVTKSPALRGCPQRRGTCTRVYVRLV 512
PIRNVTKSPALRGCPQRRGTCTRVYVRLV
Sbjct: 14 PIRNVTKSPALRGCPQRRGTCTRVYVRLV 42
>ref|YP_008592664.1| ribosomal protein S12 (chloroplast) [Berberis bealei]
gi|536462705|gb|AGU37070.1| ribosomal protein S12
(chloroplast) [Berberis bealei]
Length = 46
Score = 63.5 bits (153), Expect = 4e-08
Identities = 29/32 (90%), Positives = 31/32 (96%)
Frame = -2
Query: 598 PIRNVTKSPALRGCPQRRGTCTRVYVRLV*IM 503
PI+NVTKSPALRGCPQRRGTCTRVYVRLV I+
Sbjct: 14 PIKNVTKSPALRGCPQRRGTCTRVYVRLVQII 45
>gb|ABX26257.1| ribosomal protein S12-like protein [Panax quinquefolius]
Length = 65
Score = 63.2 bits (152), Expect = 5e-08
Identities = 31/39 (79%), Positives = 33/39 (84%)
Frame = -2
Query: 598 PIRNVTKSPALRGCPQRRGTCTRVYVRLV*IMS*HKKKQ 482
PIRNV KSPALRGCPQRRGTCTR YV LV IMS K+K+
Sbjct: 14 PIRNVPKSPALRGCPQRRGTCTRGYVGLVQIMSWDKRKK 52
>gb|AFK38361.1| unknown [Medicago truncatula]
Length = 82
Score = 62.0 bits (149), Expect = 1e-07
Identities = 28/40 (70%), Positives = 31/40 (77%)
Frame = -3
Query: 222 NGLRGSATQLTFIIKYRYCIGGSHCERPVTG*FMGRAKEC 103
NGLRGS TQL FI+KYRYCI CERP+T FMGRA +C
Sbjct: 32 NGLRGSTTQLIFILKYRYCIARFCCERPITRYFMGRAHKC 71
>gb|ESW29688.1| hypothetical protein PHAVU_002G090400g [Phaseolus vulgaris]
Length = 46
Score = 59.7 bits (143), Expect = 6e-07
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = -2
Query: 598 PIRNVTKSPALRGCPQRRGTCTRVYVRLV 512
PIRNVTKSPAL+GCPQRR TCTRVYVRLV
Sbjct: 14 PIRNVTKSPALQGCPQRRETCTRVYVRLV 42
>ref|XP_003605595.1| 30S ribosomal protein S12 [Medicago truncatula]
gi|355506650|gb|AES87792.1| 30S ribosomal protein S12
[Medicago truncatula]
Length = 162
Score = 59.3 bits (142), Expect = 8e-07
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = -2
Query: 598 PIRNVTKSPALRGCPQRRGTCTRVYV 521
PIRNVTKSPALRGCPQRRGTCTRVYV
Sbjct: 14 PIRNVTKSPALRGCPQRRGTCTRVYV 39
>emb|CCQ71644.1| ribosomal protein S12 (chloroplast) [Salvia miltiorrhiza]
Length = 122
Score = 58.9 bits (141), Expect = 1e-06
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = -2
Query: 598 PIRNVTKSPALRGCPQRRGTCTRVYV 521
PIRNVTKSPALRGCPQRRGTCTRVY+
Sbjct: 14 PIRNVTKSPALRGCPQRRGTCTRVYI 39