BLASTX nr result

ID: Rehmannia23_contig00019665 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00019665
         (379 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310713.2| hypothetical protein POPTR_0007s10760g [Popu...    57   3e-06
ref|XP_006360213.1| PREDICTED: CBS domain-containing protein CBS...    57   3e-06
ref|XP_002306482.2| hypothetical protein POPTR_0005s18410g [Popu...    56   4e-06
ref|XP_002283079.1| PREDICTED: CBS domain-containing protein CBS...    56   4e-06
emb|CAN64036.1| hypothetical protein VITISV_021555 [Vitis vinifera]    56   4e-06
ref|XP_006494468.1| PREDICTED: CBS domain-containing protein CBS...    56   6e-06
ref|XP_004233443.1| PREDICTED: CBS domain-containing protein CBS...    56   6e-06

>ref|XP_002310713.2| hypothetical protein POPTR_0007s10760g [Populus trichocarpa]
           gi|550334599|gb|EEE91163.2| hypothetical protein
           POPTR_0007s10760g [Populus trichocarpa]
          Length = 239

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 32/65 (49%), Positives = 41/65 (63%)
 Frame = +1

Query: 184 SAARLQHQIPCRLLYRPGPKLYPLYASNSLLGPSRPVSVSATSELIANAASPKNGVYTVG 363
           SA  L HQ+PC L   PG KL  L + +     S  V+ +++  L+AN  SPK+GVYTVG
Sbjct: 24  SAVSLAHQMPCLLFSPPGTKLVSLSSVSCPRSSSSFVAAASSGTLMAN--SPKSGVYTVG 81

Query: 364 DFMTR 378
           DFMTR
Sbjct: 82  DFMTR 86


>ref|XP_006360213.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like
           [Solanum tuberosum]
          Length = 236

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
 Frame = +1

Query: 154 LQPLSLLHPISAARLQHQIPCRLLYRPGPKLYPL---YASNSLLGPSRPVSVSATSELIA 324
           + P  L    S+A   HQ+PC LL  P  K+      + S  L    +  SV+A++ L A
Sbjct: 4   ISPSGLSLRRSSAAFHHQLPCLLLSLPFHKVATFAKCFLSVRLWNSRKHFSVTASNTLTA 63

Query: 325 NAASPKNGVYTVGDFMTR 378
           N+  P+NGVYTVGDFMTR
Sbjct: 64  NSIEPRNGVYTVGDFMTR 81


>ref|XP_002306482.2| hypothetical protein POPTR_0005s18410g [Populus trichocarpa]
           gi|550339236|gb|EEE93478.2| hypothetical protein
           POPTR_0005s18410g [Populus trichocarpa]
          Length = 239

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 34/66 (51%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
 Frame = +1

Query: 184 SAARLQHQIPCRLLYRPGPKLYPLYASNSLLGPSR-PVSVSATSELIANAASPKNGVYTV 360
           SA  L HQ+PC L   PG KL  L   +S+  P R P  ++A S     A SPK+GVYTV
Sbjct: 24  SAVSLTHQMPCLLFSTPGRKLVSL---SSISWPRRSPSLIAAASSGTLMANSPKSGVYTV 80

Query: 361 GDFMTR 378
           GDFMTR
Sbjct: 81  GDFMTR 86


>ref|XP_002283079.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like
           [Vitis vinifera]
          Length = 246

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 31/68 (45%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
 Frame = +1

Query: 187 AARLQHQIPCRLLYRPG--PKLYPLYASNS--LLGPSRPVSVSATSELIANAASPKNGVY 354
           +A   HQ+PC LL++PG  P +     S S  + G  R  +++A   L+AN+   KNGVY
Sbjct: 27  SASFPHQMPCTLLFQPGRKPPVGSTVGSRSERISGIRRSPALAAAGTLMANSVPSKNGVY 86

Query: 355 TVGDFMTR 378
           TVGDFMTR
Sbjct: 87  TVGDFMTR 94


>emb|CAN64036.1| hypothetical protein VITISV_021555 [Vitis vinifera]
          Length = 288

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 31/68 (45%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
 Frame = +1

Query: 187 AARLQHQIPCRLLYRPG--PKLYPLYASNS--LLGPSRPVSVSATSELIANAASPKNGVY 354
           +A   HQ+PC LL++PG  P +     S S  + G  R  +++A   L+AN+   KNGVY
Sbjct: 27  SASFPHQMPCTLLFQPGRKPPVGSTVGSRSERISGLRRSPALAAAGTLMANSVPSKNGVY 86

Query: 355 TVGDFMTR 378
           TVGDFMTR
Sbjct: 87  TVGDFMTR 94


>ref|XP_006494468.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like
           [Citrus sinensis]
          Length = 245

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 16/90 (17%)
 Frame = +1

Query: 154 LQPLSLLHPISAARLQH--------------QIPCRLLYRPGPKLYPLYASNS--LLGPS 285
           +  + L H IS ARL+               Q+PC LL RPG +++ + A++S  +    
Sbjct: 1   MDSIVLPHSISVARLRAPAAGRTSGRTSFALQLPCLLLSRPGCRVFSVLATSSDRVSALR 60

Query: 286 RPVSVSATSELIANAASPKNGVYTVGDFMT 375
           R  +V A+  L AN+A+P +GVYTVGDFMT
Sbjct: 61  RSSAVFASGTLTANSAAPSSGVYTVGDFMT 90


>ref|XP_004233443.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like
           [Solanum lycopersicum]
          Length = 236

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 31/68 (45%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
 Frame = +1

Query: 184 SAARLQHQIPCRLLYRPGPKLYPL---YASNSLLGPSRPVSVSATSELIANAASPKNGVY 354
           S+A   HQ+PC LL  P  K+      + S  L       SV+A++ L AN+  P+NGVY
Sbjct: 14  SSAAFHHQLPCLLLSLPCHKVATFAKCFLSVRLWNSRNHFSVTASNTLTANSVEPRNGVY 73

Query: 355 TVGDFMTR 378
           TVGDFMTR
Sbjct: 74  TVGDFMTR 81


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