BLASTX nr result
ID: Rehmannia23_contig00019610
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00019610
(575 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006490199.1| PREDICTED: F-box protein At5g07610-like [Cit... 69 4e-22
ref|XP_006421545.1| hypothetical protein CICLE_v10005090mg [Citr... 66 7e-20
ref|XP_006490233.1| PREDICTED: F-box protein At5g07610-like [Cit... 67 5e-19
ref|XP_006421544.1| hypothetical protein CICLE_v10006867mg [Citr... 64 2e-18
gb|EXC20948.1| F-box protein [Morus notabilis] 61 3e-18
ref|XP_006421543.1| hypothetical protein CICLE_v10005096mg [Citr... 65 2e-17
ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vi... 70 8e-17
gb|EOY22796.1| F-box family protein, putative [Theobroma cacao] 57 5e-16
ref|XP_004238485.1| PREDICTED: F-box protein At5g07610-like [Sol... 57 5e-15
ref|XP_002526240.1| conserved hypothetical protein [Ricinus comm... 66 7e-15
ref|XP_006359839.1| PREDICTED: F-box protein At5g07610-like [Sol... 58 1e-14
ref|XP_004301403.1| PREDICTED: F-box protein At5g07610-like [Fra... 51 3e-13
ref|XP_002267226.1| PREDICTED: F-box protein At5g07610 [Vitis vi... 50 5e-13
ref|XP_006421557.1| hypothetical protein CICLE_v10005086mg [Citr... 60 6e-13
ref|XP_004305934.1| PREDICTED: F-box protein At5g07610-like [Fra... 56 6e-12
ref|XP_004304008.1| PREDICTED: F-box protein At5g07610-like isof... 56 6e-12
ref|XP_004304009.1| PREDICTED: F-box protein At5g07610-like isof... 56 6e-12
ref|XP_004301401.1| PREDICTED: F-box protein At5g07610-like [Fra... 49 8e-12
gb|AAR15451.1| F-box protein [Arabidopsis arenosa] 58 4e-11
ref|XP_002871279.1| F box protein family [Arabidopsis lyrata sub... 58 4e-11
>ref|XP_006490199.1| PREDICTED: F-box protein At5g07610-like [Citrus sinensis]
Length = 369
Score = 68.6 bits (166), Expect(2) = 4e-22
Identities = 43/101 (42%), Positives = 55/101 (54%)
Frame = +1
Query: 271 FGIGISSPQELCVHIHLDVSKPNYPPFRKLKFPGDSFWYGIQHSCNGLLLCCCSWNDPCY 450
F + +S+P+ I+LD S P PPFR L F S+ I SCNGLLLC ++
Sbjct: 87 FALQVSNPEY--DFINLD-SNPPSPPFRTLTFVNTSYGIQILQSCNGLLLCSSGHSN--- 140
Query: 451 RMSPIRSCYVYNPTTKCSTKLPLPGVMNGVPENVYGVNLAF 573
YVYNPTTK LP P + GV +++GVNLAF
Sbjct: 141 -------YYVYNPTTKQYRILPQPRIGRGVSRSIFGVNLAF 174
Score = 62.0 bits (149), Expect(2) = 4e-22
Identities = 34/64 (53%), Positives = 44/64 (68%), Gaps = 4/64 (6%)
Frame = +2
Query: 113 ADVIGSIDDLLMQIFVRLPVKSLIRFKLVSKHWKSLITS----HHFSLLRYPRPNPILGL 280
A+VIG++DDLL +I +RLP+KSL++FK VSKHW SLI++ H SL R PI GL
Sbjct: 27 AEVIGNLDDLLTEILLRLPIKSLLKFKSVSKHWLSLISNPVFCHRLSLTR----KPITGL 82
Query: 281 VYPR 292
R
Sbjct: 83 FVHR 86
>ref|XP_006421545.1| hypothetical protein CICLE_v10005090mg [Citrus clementina]
gi|557523418|gb|ESR34785.1| hypothetical protein
CICLE_v10005090mg [Citrus clementina]
Length = 404
Score = 66.2 bits (160), Expect(2) = 7e-20
Identities = 42/102 (41%), Positives = 56/102 (54%)
Frame = +1
Query: 268 YFGIGISSPQELCVHIHLDVSKPNYPPFRKLKFPGDSFWYGIQHSCNGLLLCCCSWNDPC 447
+F + +S+P+ I+LD S P+ PPFR L F S+ I SCNGLLLC
Sbjct: 84 HFALQVSNPEY--DFINLD-SNPSSPPFRTLTFVNTSYGNQILQSCNGLLLC-------- 132
Query: 448 YRMSPIRSCYVYNPTTKCSTKLPLPGVMNGVPENVYGVNLAF 573
S + Y Y+PTTK LP P + GV +++GVNLAF
Sbjct: 133 --SSGHSNYYFYDPTTKQYRILPQPRIGRGVSRSIFGVNLAF 172
Score = 57.0 bits (136), Expect(2) = 7e-20
Identities = 30/64 (46%), Positives = 43/64 (67%), Gaps = 4/64 (6%)
Frame = +2
Query: 107 RSADVIGSIDDLLMQIFVRLPVKSLIRFKLVSKHWKSLITS----HHFSLLRYPRPNPIL 274
+S +V G++DDLL +I + +P+K L++FK VSKHW SLI++ H SL+R PI
Sbjct: 23 QSPEVTGNLDDLLTEILLCIPIKLLLKFKSVSKHWLSLISNPVFCHRLSLIR----KPIT 78
Query: 275 GLVY 286
GL Y
Sbjct: 79 GLFY 82
>ref|XP_006490233.1| PREDICTED: F-box protein At5g07610-like [Citrus sinensis]
Length = 416
Score = 67.4 bits (163), Expect(2) = 5e-19
Identities = 39/101 (38%), Positives = 56/101 (55%)
Frame = +1
Query: 271 FGIGISSPQELCVHIHLDVSKPNYPPFRKLKFPGDSFWYGIQHSCNGLLLCCCSWNDPCY 450
F + +++P+ +++ S P+ PF+ L F DS+ + SCNGLLLC S
Sbjct: 89 FTLRVNNPEYDFINLE---SNPSRAPFKSLTFVNDSYGIKVLQSCNGLLLCSSS-----R 140
Query: 451 RMSPIRSCYVYNPTTKCSTKLPLPGVMNGVPENVYGVNLAF 573
P R+ YVYNPT K T LP V G+ +++GVNLAF
Sbjct: 141 AYQPRRNYYVYNPTNKQYTILPRLHVDRGIFRSIFGVNLAF 181
Score = 52.8 bits (125), Expect(2) = 5e-19
Identities = 25/44 (56%), Positives = 34/44 (77%)
Frame = +2
Query: 110 SADVIGSIDDLLMQIFVRLPVKSLIRFKLVSKHWKSLITSHHFS 241
S + I + DDLL +I +RLP+KSL++FK VSKHW SLI++ FS
Sbjct: 28 SVETIINNDDLLTEILLRLPIKSLLKFKAVSKHWLSLISNPIFS 71
>ref|XP_006421544.1| hypothetical protein CICLE_v10006867mg [Citrus clementina]
gi|557523417|gb|ESR34784.1| hypothetical protein
CICLE_v10006867mg [Citrus clementina]
Length = 407
Score = 63.5 bits (153), Expect(2) = 2e-18
Identities = 39/87 (44%), Positives = 47/87 (54%)
Frame = +1
Query: 313 IHLDVSKPNYPPFRKLKFPGDSFWYGIQHSCNGLLLCCCSWNDPCYRMSPIRSCYVYNPT 492
I+LD SKP+ PPFR L F DS+ I SCNGLLLC + Y+ NP+
Sbjct: 99 INLD-SKPSSPPFRTLTFVNDSYGIQILQSCNGLLLCSGGHG----------NYYICNPS 147
Query: 493 TKCSTKLPLPGVMNGVPENVYGVNLAF 573
T LP P V GV ++ GVNLAF
Sbjct: 148 TNQYRLLPQPPVGGGVSRSILGVNLAF 174
Score = 55.1 bits (131), Expect(2) = 2e-18
Identities = 31/64 (48%), Positives = 43/64 (67%), Gaps = 4/64 (6%)
Frame = +2
Query: 113 ADVIGSIDDLLMQIFVRLPVKSLIRFKLVSKHWKSLITSHHF----SLLRYPRPNPILGL 280
++VI ++DDLL +I + LP+KSL++FK VSKHW SLI++ F SL+R PI GL
Sbjct: 27 SEVIANLDDLLTEILICLPIKSLLKFKSVSKHWLSLISNPVFCRRLSLIR----KPITGL 82
Query: 281 VYPR 292
R
Sbjct: 83 FVDR 86
>gb|EXC20948.1| F-box protein [Morus notabilis]
Length = 429
Score = 61.2 bits (147), Expect(2) = 3e-18
Identities = 34/69 (49%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Frame = +2
Query: 104 ARSADVIGSIDDLLMQIFVRLPVKSLIRFKLVSKHWKSLITSHHFSLLRYPR-PNPILGL 280
+RSA+ I + DDLL +I +RLP+KSL++FK VSKH SLI+ +FSL R P P GL
Sbjct: 21 SRSAETIANNDDLLNEILLRLPIKSLLKFKSVSKHCLSLISDPNFSLRRNPNFPTSASGL 80
Query: 281 VYPRRKSSV 307
R S+
Sbjct: 81 FLARSSRSI 89
Score = 56.2 bits (134), Expect(2) = 3e-18
Identities = 40/91 (43%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Frame = +1
Query: 313 IHLDVSKPNYP--PFRKLKFP-GDSFWYGIQHSCNGLLLCCCSWNDPCYRMSPIRSCYVY 483
++LD PN PFR L F G GI SCNGLLLCC R R +V+
Sbjct: 98 VNLDDLIPNSSESPFRSLAFTDGGHVATGIIQSCNGLLLCC------SIRALEPRENFVF 151
Query: 484 NPTTKCSTKL-PLPGVMNGVPENVYGVNLAF 573
NPTTK TKL P+ V +G V+G++LAF
Sbjct: 152 NPTTKQFTKLPPISPVGDGAHRRVFGLSLAF 182
>ref|XP_006421543.1| hypothetical protein CICLE_v10005096mg [Citrus clementina]
gi|557523416|gb|ESR34783.1| hypothetical protein
CICLE_v10005096mg [Citrus clementina]
Length = 403
Score = 65.1 bits (157), Expect(2) = 2e-17
Identities = 39/101 (38%), Positives = 54/101 (53%)
Frame = +1
Query: 271 FGIGISSPQELCVHIHLDVSKPNYPPFRKLKFPGDSFWYGIQHSCNGLLLCCCSWNDPCY 450
F + +++P+ +++ S P+ PF+ L F DS+ + SCNGLLLC S
Sbjct: 89 FTLRVNNPEYEFINLE---SNPSRAPFKSLTFVNDSYGIKVLQSCNGLLLCSSS-----R 140
Query: 451 RMSPIRSCYVYNPTTKCSTKLPLPGVMNGVPENVYGVNLAF 573
P R YVYNPT K T LP V G+ ++GVNLAF
Sbjct: 141 AYQPRRIYYVYNPTNKQYTILPRLHVDRGIFRLIFGVNLAF 181
Score = 49.7 bits (117), Expect(2) = 2e-17
Identities = 24/44 (54%), Positives = 33/44 (75%)
Frame = +2
Query: 110 SADVIGSIDDLLMQIFVRLPVKSLIRFKLVSKHWKSLITSHHFS 241
S + I + DDLL +I + LP+KSL++FK VSKHW SLI++ FS
Sbjct: 28 SVETIINNDDLLTEILLCLPIKSLLKFKAVSKHWLSLISNPIFS 71
>ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera]
gi|297743579|emb|CBI36446.3| unnamed protein product
[Vitis vinifera]
Length = 374
Score = 69.7 bits (169), Expect(2) = 8e-17
Identities = 36/86 (41%), Positives = 53/86 (61%)
Frame = +2
Query: 110 SADVIGSIDDLLMQIFVRLPVKSLIRFKLVSKHWKSLITSHHFSLLRYPRPNPILGLVYP 289
SA ++ S DDLL ++ +RLP+KSL++FK VSKHW SLIT HFS + +PNP+
Sbjct: 13 SAHIVASNDDLLSELLLRLPIKSLLKFKSVSKHWLSLITDPHFSRRKNLKPNPV------ 66
Query: 290 RRKSSVFTFT*MCQSQITRPLGNSNF 367
S++F+F + Q + P + F
Sbjct: 67 ---SALFSFVPLDPLQTSAPFTSLTF 89
Score = 43.1 bits (100), Expect(2) = 8e-17
Identities = 34/76 (44%), Positives = 36/76 (47%)
Frame = +1
Query: 346 PFRKLKFPGDSFWYGIQHSCNGLLLCCCSWNDPCYRMSPIRSCYVYNPTTKCSTKLPLPG 525
PF L F I SCNGL CCS D Y S R Y+YNPTTK T LP
Sbjct: 83 PFTSLTFVDHPRGIEILQSCNGLF--CCSSVD--YNDSE-RKYYIYNPTTKQFT--TLPP 135
Query: 526 VMNGVPENVYGVNLAF 573
+ V GVNLAF
Sbjct: 136 LCGRSVRRVLGVNLAF 151
>gb|EOY22796.1| F-box family protein, putative [Theobroma cacao]
Length = 407
Score = 57.0 bits (136), Expect(2) = 5e-16
Identities = 36/83 (43%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Frame = +1
Query: 334 PNYPPFRKLKFPGDSFWYGIQHSCNGLLLCCCSWNDPCYRMS-PIRSCYVYNPTTKCSTK 510
P+ PF+ L F D I SCNGLLLCC +R + P + Y+YNPTTK T
Sbjct: 98 PSRAPFQSLTFVDDPSGIRILQSCNGLLLCC------SFRANRPETTYYIYNPTTKQYTV 151
Query: 511 LP--LPGVMNGVPENVYGVNLAF 573
LP PG N +GV+LAF
Sbjct: 152 LPGLGPGPRGRSSRNTFGVSLAF 174
Score = 53.1 bits (126), Expect(2) = 5e-16
Identities = 25/49 (51%), Positives = 36/49 (73%)
Frame = +2
Query: 95 IITARSADVIGSIDDLLMQIFVRLPVKSLIRFKLVSKHWKSLITSHHFS 241
++++ SAD+I S D++L I + LP+K L++FK VSKHW SLIT FS
Sbjct: 17 LLSSSSADLIASDDNILTLILLCLPLKCLLKFKTVSKHWLSLITDPRFS 65
>ref|XP_004238485.1| PREDICTED: F-box protein At5g07610-like [Solanum lycopersicum]
Length = 410
Score = 57.0 bits (136), Expect(2) = 5e-15
Identities = 27/49 (55%), Positives = 37/49 (75%)
Frame = +2
Query: 134 DDLLMQIFVRLPVKSLIRFKLVSKHWKSLITSHHFSLLRYPRPNPILGL 280
++L+++IF+RLPVKSL+R K V+K W +LITS F+ LR P NP GL
Sbjct: 5 EELMIEIFLRLPVKSLVRCKCVAKKWNNLITSPEFTRLRVPCFNPARGL 53
Score = 49.7 bits (117), Expect(2) = 5e-15
Identities = 32/84 (38%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Frame = +1
Query: 325 VSKPNYPPFRKLKFPGDSFWYGIQHSCNGLLLCCCSWNDPCYRM-SPIRSCYVYNPTTKC 501
+ P PF KL F D + I SCNGLLLCC +R+ P + YVYNPTT+
Sbjct: 73 LENPIQSPFHKLIFVDDPYGIRILQSCNGLLLCC------SFRVRGPNENYYVYNPTTQQ 126
Query: 502 STKLPLPGVMNGVPENVYGVNLAF 573
L + + V G+ LAF
Sbjct: 127 FVTLSRLEGHGQISKAVIGMKLAF 150
>ref|XP_002526240.1| conserved hypothetical protein [Ricinus communis]
gi|223534434|gb|EEF36137.1| conserved hypothetical
protein [Ricinus communis]
Length = 393
Score = 65.9 bits (159), Expect(2) = 7e-15
Identities = 41/95 (43%), Positives = 54/95 (56%), Gaps = 6/95 (6%)
Frame = +2
Query: 110 SADVIGSIDDLLMQIFVRLPVKSLIRFKLVSKHWKSLITSHHFSLLRYPR-PNPILGLVY 286
SA++IGS +DL+ QI +RLPVK L+RFK VSK W SLI++ HFS L R PN + ++
Sbjct: 6 SAEIIGSNEDLITQILLRLPVKPLLRFKSVSKQWLSLISTPHFSSLHTLRNPNHTISALF 65
Query: 287 PRRKSSVFTFT*MCQSQIT-----RPLGNSNFQGI 376
R F F + S + PL F GI
Sbjct: 66 LRNSPLEFKFLSLSSSSSSSSSSASPLSFDLFHGI 100
Score = 40.4 bits (93), Expect(2) = 7e-15
Identities = 27/63 (42%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +1
Query: 391 IQHSCNGLLLCCCSWNDPCYRMSPIRSCYVYNPTTKCSTKLP-LPGVMNGV-PENVYGVN 564
I SCNGLLLC ++ R+ Y+ NPTTK LP L G N P ++G+N
Sbjct: 102 ILQSCNGLLLC-----STLPKIGQKRNYYISNPTTKQMFTLPSLVGDANAASPTTLFGLN 156
Query: 565 LAF 573
LAF
Sbjct: 157 LAF 159
>ref|XP_006359839.1| PREDICTED: F-box protein At5g07610-like [Solanum tuberosum]
Length = 142
Score = 58.2 bits (139), Expect(2) = 1e-14
Identities = 31/61 (50%), Positives = 43/61 (70%)
Frame = +2
Query: 98 ITARSADVIGSIDDLLMQIFVRLPVKSLIRFKLVSKHWKSLITSHHFSLLRYPRPNPILG 277
I++ SA+ + ++LL++IF+RLPVKSL+R K V+K W LITS F+ LR P NP G
Sbjct: 10 ISSISANEVIPNEELLIEIFLRLPVKSLVRCKCVAKKWNYLITSPKFTRLRVPCFNPARG 69
Query: 278 L 280
L
Sbjct: 70 L 70
Score = 47.4 bits (111), Expect(2) = 1e-14
Identities = 26/52 (50%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +1
Query: 346 PFRKLKFPGDSFWYGIQHSCNGLLLCCCSWNDPCYRM-SPIRSCYVYNPTTK 498
PF KL F DS+ I SCNGLLLCC +R+ P + YVYNPTT+
Sbjct: 97 PFHKLIFVDDSYGIRILQSCNGLLLCC------SFRVHGPNENYYVYNPTTQ 142
>ref|XP_004301403.1| PREDICTED: F-box protein At5g07610-like [Fragaria vesca subsp.
vesca]
Length = 370
Score = 51.2 bits (121), Expect(2) = 3e-13
Identities = 30/83 (36%), Positives = 43/83 (51%)
Frame = +1
Query: 274 GIGISSPQELCVHIHLDVSKPNYPPFRKLKFPGDSFWYGIQHSCNGLLLCCCSWNDPCYR 453
G+ + ++ H+ L S +Y PF L F DS I S +GLLLCC + Y+
Sbjct: 48 GVILCRRTDIIHHVSLAGSNSDYQPFTSLCFIDDSAGVKILQSSHGLLLCCSN-----YK 102
Query: 454 MSPIRSCYVYNPTTKCSTKLPLP 522
+ RS Y+ NP+TK + LP P
Sbjct: 103 LGKARSYYICNPSTKKYSILPEP 125
Score = 49.3 bits (116), Expect(2) = 3e-13
Identities = 26/53 (49%), Positives = 35/53 (66%)
Frame = +2
Query: 137 DLLMQIFVRLPVKSLIRFKLVSKHWKSLITSHHFSLLRYPRPNPILGLVYPRR 295
DL+ +I +RLPVKSL+RFK VSK W SLI+ HF R+ + G++ RR
Sbjct: 5 DLITEILLRLPVKSLLRFKCVSKQWLSLISDTHF---RHHHRHASSGVILCRR 54
>ref|XP_002267226.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera]
gi|296090309|emb|CBI40128.3| unnamed protein product
[Vitis vinifera]
Length = 415
Score = 50.4 bits (119), Expect(2) = 5e-13
Identities = 34/100 (34%), Positives = 47/100 (47%)
Frame = +1
Query: 274 GIGISSPQELCVHIHLDVSKPNYPPFRKLKFPGDSFWYGIQHSCNGLLLCCCSWNDPCYR 453
G+ + P I D K + PP R L F GD + CNGLL CCS
Sbjct: 84 GVLLGLPNSNFDFISFDEKKASEPPLRSLDFIGDPLGVKVLQVCNGLL--CCS---TVRS 138
Query: 454 MSPIRSCYVYNPTTKCSTKLPLPGVMNGVPENVYGVNLAF 573
+ R+ Y+ N T+ + LP P +G + V+G+NLAF
Sbjct: 139 LGTSRNYYICNLATRRFSVLP-PPCSSGGRDTVFGINLAF 177
Score = 49.7 bits (117), Expect(2) = 5e-13
Identities = 23/47 (48%), Positives = 32/47 (68%)
Frame = +2
Query: 98 ITARSADVIGSIDDLLMQIFVRLPVKSLIRFKLVSKHWKSLITSHHF 238
++ SA+ + DLL +IF+R PVK L+RF+ VSK W SLI+ HF
Sbjct: 24 MSTSSAEQVAGNGDLLTEIFLRTPVKPLLRFRSVSKRWLSLISDPHF 70
>ref|XP_006421557.1| hypothetical protein CICLE_v10005086mg [Citrus clementina]
gi|567857750|ref|XP_006421558.1| hypothetical protein
CICLE_v10005086mg [Citrus clementina]
gi|557523430|gb|ESR34797.1| hypothetical protein
CICLE_v10005086mg [Citrus clementina]
gi|557523431|gb|ESR34798.1| hypothetical protein
CICLE_v10005086mg [Citrus clementina]
Length = 405
Score = 60.5 bits (145), Expect(2) = 6e-13
Identities = 28/58 (48%), Positives = 41/58 (70%)
Frame = +2
Query: 110 SADVIGSIDDLLMQIFVRLPVKSLIRFKLVSKHWKSLITSHHFSLLRYPRPNPILGLV 283
S++ + S D LL +I V LP+KSL++FK +SKHW+SLI+S FS YP + + GL+
Sbjct: 3 SSEAVASNDGLLTEILVHLPIKSLMKFKCISKHWQSLISSPGFSRRLYPDSHLVSGLI 60
Score = 39.3 bits (90), Expect(2) = 6e-13
Identities = 27/66 (40%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Frame = +1
Query: 346 PFRKLKFPGDSFWYGIQHSCNGLLLCCCS---WNDPCYRMSPIRSCYVYNPTTKCSTKLP 516
PFR L F I SCNGLLLC S WN PC VYNPT+ +P
Sbjct: 86 PFRSLTFVNHPSGLIILQSCNGLLLCASSISDWNIPC-------DYCVYNPTSHEFVTVP 138
Query: 517 LPGVMN 534
G N
Sbjct: 139 PLGDEN 144
>ref|XP_004305934.1| PREDICTED: F-box protein At5g07610-like [Fragaria vesca subsp.
vesca]
Length = 415
Score = 56.2 bits (134), Expect(2) = 6e-12
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = +2
Query: 113 ADVIGSIDDLLMQIFVRLPVKSLIRFKLVSKHWKSLITSHHFSLLR-YPRPNPILGLVYP 289
A+ I SI+ +L +I VR+P K L+RFK VSKHW SLI+ F PNP + V+
Sbjct: 16 AETIASIEQVLTEILVRVPAKPLVRFKCVSKHWLSLISDPKFCHRHTLQNPNPPVSAVFC 75
Query: 290 RRKSSVFTF 316
+ + +F F
Sbjct: 76 DKSNRIFCF 84
Score = 40.0 bits (92), Expect(2) = 6e-12
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Frame = +1
Query: 328 SKPNYPPFRKLKFPGDSFWYGIQ--HSCNGLLLCCCSWNDPCYRMSPIRSCYVYNPTTKC 501
S + PPF LKF + + I+ SCNGL LC ++ + P +++NPTT
Sbjct: 111 SPSSSPPFNPLKFAQNQYHADIKIIQSCNGLFLCRLLYSP---KQGP--PYFIFNPTTNQ 165
Query: 502 STKLPLPGVMNGVPENVYGVNLAF 573
+ L P GV V + LAF
Sbjct: 166 FSTLIPPATGEGVQPCVISIALAF 189
>ref|XP_004304008.1| PREDICTED: F-box protein At5g07610-like isoform 1 [Fragaria vesca
subsp. vesca]
Length = 415
Score = 56.2 bits (134), Expect(2) = 6e-12
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = +2
Query: 113 ADVIGSIDDLLMQIFVRLPVKSLIRFKLVSKHWKSLITSHHFSLLR-YPRPNPILGLVYP 289
A+ I SI+ +L +I VR+P K L+RFK VSKHW SLI+ F PNP + V+
Sbjct: 16 AETIASIEQVLTEILVRVPAKPLVRFKCVSKHWLSLISDPKFCHRHTLQNPNPPVSAVFC 75
Query: 290 RRKSSVFTF 316
+ + +F F
Sbjct: 76 DKSNRIFCF 84
Score = 40.0 bits (92), Expect(2) = 6e-12
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Frame = +1
Query: 328 SKPNYPPFRKLKFPGDSFWYGIQ--HSCNGLLLCCCSWNDPCYRMSPIRSCYVYNPTTKC 501
S + PPF LKF + + I+ SCNGL LC ++ + P +++NPTT
Sbjct: 111 SPSSSPPFNPLKFAQNQYHADIKIIQSCNGLFLCRLLYSP---KQGP--PYFIFNPTTNQ 165
Query: 502 STKLPLPGVMNGVPENVYGVNLAF 573
+ L P GV V + LAF
Sbjct: 166 FSTLIPPATGEGVQPCVISIALAF 189
>ref|XP_004304009.1| PREDICTED: F-box protein At5g07610-like isoform 2 [Fragaria vesca
subsp. vesca]
Length = 333
Score = 56.2 bits (134), Expect(2) = 6e-12
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = +2
Query: 113 ADVIGSIDDLLMQIFVRLPVKSLIRFKLVSKHWKSLITSHHFSLLR-YPRPNPILGLVYP 289
A+ I SI+ +L +I VR+P K L+RFK VSKHW SLI+ F PNP + V+
Sbjct: 16 AETIASIEQVLTEILVRVPAKPLVRFKCVSKHWLSLISDPKFCHRHTLQNPNPPVSAVFC 75
Query: 290 RRKSSVFTF 316
+ + +F F
Sbjct: 76 DKSNRIFCF 84
Score = 40.0 bits (92), Expect(2) = 6e-12
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Frame = +1
Query: 328 SKPNYPPFRKLKFPGDSFWYGIQ--HSCNGLLLCCCSWNDPCYRMSPIRSCYVYNPTTKC 501
S + PPF LKF + + I+ SCNGL LC ++ + P +++NPTT
Sbjct: 111 SPSSSPPFNPLKFAQNQYHADIKIIQSCNGLFLCRLLYSP---KQGP--PYFIFNPTTNQ 165
Query: 502 STKLPLPGVMNGVPENVYGVNLAF 573
+ L P GV V + LAF
Sbjct: 166 FSTLIPPATGEGVQPCVISIALAF 189
>ref|XP_004301401.1| PREDICTED: F-box protein At5g07610-like [Fragaria vesca subsp.
vesca]
Length = 408
Score = 48.9 bits (115), Expect(2) = 8e-12
Identities = 23/43 (53%), Positives = 29/43 (67%)
Frame = +2
Query: 113 ADVIGSIDDLLMQIFVRLPVKSLIRFKLVSKHWKSLITSHHFS 241
A+ + DL+ I +RLPVKSL+RFK VSK W SLI+ FS
Sbjct: 28 AEAVSGNQDLITDILLRLPVKSLLRFKCVSKQWLSLISDPQFS 70
Score = 47.0 bits (110), Expect(2) = 8e-12
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +1
Query: 343 PPFRKLKFPGDSFWYGIQHSCNGLLLCCCSWNDPCYRMSPIRSCYVYNPTTKCSTKLPLP 522
PPF L F DS I SCNGL+LCC + + R+ Y+ NP+ + LP P
Sbjct: 102 PPFTSLGFIDDSAGTKILQSCNGLVLCC-----SFFELGKSRNYYICNPSRRQFLMLPPP 156
Query: 523 GVMN-GVPENVYGVNLAF 573
P ++GV+L F
Sbjct: 157 SAKGCDEPITIFGVHLYF 174
>gb|AAR15451.1| F-box protein [Arabidopsis arenosa]
Length = 421
Score = 57.8 bits (138), Expect(2) = 4e-11
Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Frame = +2
Query: 101 TARSADVIGSIDDLLMQIFVRLPVKSLIRFKLVSKHWKSLITSHHFS--LLRYPRPNPIL 274
++ SA ++ IDD+L+QI LP+K+L+RFK VSK W SLIT+ FS +++ P PI
Sbjct: 24 SSSSATIVADIDDILIQILSLLPIKTLLRFKRVSKRWLSLITNPDFSNRVIKSNHPLPIS 83
Query: 275 GLVYPRRKSSVFTF 316
G ++ ++F
Sbjct: 84 GFFLHSPRAFKYSF 97
Score = 35.8 bits (81), Expect(2) = 4e-11
Identities = 22/43 (51%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 391 IQHSCNGLLLCCCSWNDPCYRMSPIRS-CYVYNPTTKCSTKLP 516
I S NGLLLC CS C + + YVYNPTTK T LP
Sbjct: 128 IMQSTNGLLLCKCS----CASSNHFNTNYYVYNPTTKQYTLLP 166
>ref|XP_002871279.1| F box protein family [Arabidopsis lyrata subsp. lyrata]
gi|34013883|gb|AAQ56109.1| F box protein family
[Arabidopsis lyrata subsp. lyrata]
gi|297317116|gb|EFH47538.1| F box protein family
[Arabidopsis lyrata subsp. lyrata]
Length = 421
Score = 57.8 bits (138), Expect(2) = 4e-11
Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Frame = +2
Query: 101 TARSADVIGSIDDLLMQIFVRLPVKSLIRFKLVSKHWKSLITSHHFS--LLRYPRPNPIL 274
++ SA ++ +IDD+L+QI LP+K+L+RFK VSK W SLIT+ FS +++ P PI
Sbjct: 24 SSSSATIVANIDDVLIQILSFLPIKTLLRFKRVSKRWLSLITNPDFSNRIIKSNHPLPIS 83
Query: 275 GLVYPRRKSSVFTF 316
G ++ ++F
Sbjct: 84 GFFLHSPRAIKYSF 97
Score = 35.8 bits (81), Expect(2) = 4e-11
Identities = 22/43 (51%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 391 IQHSCNGLLLCCCSWNDPCYRMSPIRS-CYVYNPTTKCSTKLP 516
I S NGLLLC CS C + + YVYNPTTK T LP
Sbjct: 128 IMQSTNGLLLCQCS----CASSNHFNTNYYVYNPTTKQYTLLP 166