BLASTX nr result
ID: Rehmannia23_contig00018887
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00018887
(486 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAO49746.1| nuclear pore complex protein Nup96a [Nicotiana b... 135 4e-30
ref|XP_004235924.1| PREDICTED: nuclear pore complex protein Nup9... 124 2e-26
ref|XP_006341370.1| PREDICTED: nuclear pore complex protein Nup9... 122 5e-26
ref|XP_002527319.1| nucleoporin, putative [Ricinus communis] gi|... 119 4e-25
ref|XP_002271967.1| PREDICTED: nuclear pore complex protein Nup9... 117 2e-24
gb|EPS71530.1| hypothetical protein M569_03229, partial [Genlise... 111 1e-22
gb|EXB67202.1| Nuclear pore complex protein [Morus notabilis] 110 3e-22
ref|XP_002889279.1| hypothetical protein ARALYDRAFT_895920 [Arab... 108 1e-21
ref|XP_002303836.1| PRECOCIOUS family protein [Populus trichocar... 107 2e-21
ref|XP_006300673.1| hypothetical protein CARUB_v10019705mg [Caps... 106 3e-21
ref|XP_006389822.1| hypothetical protein EUTSA_v10018057mg [Eutr... 106 4e-21
gb|AAF14656.1|AC011713_4 Identical to gi|1297187 nucleoprotein 9... 106 4e-21
ref|NP_178183.2| suppressor of auxin resistance 3 [Arabidopsis t... 106 4e-21
dbj|BAJ34529.1| unnamed protein product [Thellungiella halophila] 106 4e-21
gb|AAN03675.1|AF411838_1 putative nucleoporin PRECOZ [Arabidopsi... 106 4e-21
ref|XP_006465209.1| PREDICTED: nuclear pore complex protein Nup9... 105 6e-21
ref|XP_006427580.1| hypothetical protein CICLE_v10024784mg [Citr... 104 1e-20
gb|EOY26007.1| Suppressor of auxin resistance 3 [Theobroma cacao] 101 9e-20
ref|XP_004140177.1| PREDICTED: nuclear pore complex protein Nup9... 100 3e-19
ref|XP_003544079.1| PREDICTED: nuclear pore complex protein Nup9... 99 6e-19
>dbj|BAO49746.1| nuclear pore complex protein Nup96a [Nicotiana benthamiana]
Length = 1037
Score = 135 bits (341), Expect = 4e-30
Identities = 69/109 (63%), Positives = 84/109 (77%)
Frame = +2
Query: 155 MEVDVGILKQMPAAQSQFKRRRISMDGADTSISCQLLHEVENSLPTLRCSDYYTKPCLSE 334
MEVD+GI Q+ +QSQ KRR++S+DG Q+ E E +LPTL+ +DY+T+PCLSE
Sbjct: 1 MEVDIGIHDQLIVSQSQCKRRKVSLDGVALD---QIFGENEAALPTLQSTDYFTEPCLSE 57
Query: 335 LAIRELMNPGYCSRVQDFVVGRVGYGCVKFIGETDVRCLDLDCIVKFNR 481
LAIRELM+PGYCS V+DF VGR GYG VKF GETDVR LDLD IV F+R
Sbjct: 58 LAIRELMSPGYCSSVRDFTVGRFGYGFVKFFGETDVRGLDLDRIVTFSR 106
>ref|XP_004235924.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like [Solanum
lycopersicum]
Length = 1012
Score = 124 bits (310), Expect = 2e-26
Identities = 67/110 (60%), Positives = 83/110 (75%), Gaps = 1/110 (0%)
Frame = +2
Query: 155 MEVDVGILKQMPAAQSQFKRRRIS-MDGADTSISCQLLHEVENSLPTLRCSDYYTKPCLS 331
MEVD+G +Q+ +QSQ KRR+IS +D Q+L E E LPTLR DY+T+PCLS
Sbjct: 1 MEVDLGNPEQLIVSQSQCKRRKISALD--------QILGENEADLPTLRSPDYFTEPCLS 52
Query: 332 ELAIRELMNPGYCSRVQDFVVGRVGYGCVKFIGETDVRCLDLDCIVKFNR 481
ELA+RELM+ GYCS+V++F VGR GYG V+F GETDVR LDLD IVKF+R
Sbjct: 53 ELAVRELMSSGYCSKVENFTVGRFGYGFVEFSGETDVRGLDLDRIVKFSR 102
>ref|XP_006341370.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like [Solanum
tuberosum]
Length = 1033
Score = 122 bits (306), Expect = 5e-26
Identities = 67/110 (60%), Positives = 81/110 (73%), Gaps = 1/110 (0%)
Frame = +2
Query: 155 MEVDVGILKQMPAAQSQFKRRRIS-MDGADTSISCQLLHEVENSLPTLRCSDYYTKPCLS 331
MEV++G +Q+ +QSQ KRR+IS +D Q+L E E LPTLR DY+T PCLS
Sbjct: 1 MEVELGTPEQLIVSQSQCKRRKISALD--------QILGENEADLPTLRSPDYFTDPCLS 52
Query: 332 ELAIRELMNPGYCSRVQDFVVGRVGYGCVKFIGETDVRCLDLDCIVKFNR 481
ELA+RELM GYCS+V++F VGR GYG VKF GETDVR LDLD IVKF+R
Sbjct: 53 ELAVRELMISGYCSKVENFTVGRFGYGFVKFSGETDVRGLDLDRIVKFSR 102
>ref|XP_002527319.1| nucleoporin, putative [Ricinus communis]
gi|223533319|gb|EEF35071.1| nucleoporin, putative
[Ricinus communis]
Length = 1067
Score = 119 bits (298), Expect = 4e-25
Identities = 57/108 (52%), Positives = 81/108 (75%)
Frame = +2
Query: 158 EVDVGILKQMPAAQSQFKRRRISMDGADTSISCQLLHEVENSLPTLRCSDYYTKPCLSEL 337
+ +VG+ + Q+Q+K+RR+S + D +SC++ E+E SLPTL +DYY +P L++L
Sbjct: 32 DCEVGVF----SLQTQYKKRRLSPNNDD--VSCEISREIECSLPTLCSTDYYMEPSLTDL 85
Query: 338 AIRELMNPGYCSRVQDFVVGRVGYGCVKFIGETDVRCLDLDCIVKFNR 481
EL++PGYCSRV DF+VGR+G+GCVKF+G TD+R LDLD IVKF R
Sbjct: 86 VAHELIDPGYCSRVPDFIVGRLGFGCVKFLGTTDLRWLDLDKIVKFRR 133
>ref|XP_002271967.1| PREDICTED: nuclear pore complex protein Nup98-Nup96 [Vitis
vinifera]
Length = 1041
Score = 117 bits (292), Expect = 2e-24
Identities = 60/96 (62%), Positives = 72/96 (75%)
Frame = +2
Query: 194 AQSQFKRRRISMDGADTSISCQLLHEVENSLPTLRCSDYYTKPCLSELAIRELMNPGYCS 373
A Q+KRR+IS + S C++ EVE SLPTLR S YY +PCL ELA RELM+ G+CS
Sbjct: 15 ALHQYKRRKISQK--NVSSLCEVHGEVEASLPTLRSSGYYMEPCLKELAKRELMDSGFCS 72
Query: 374 RVQDFVVGRVGYGCVKFIGETDVRCLDLDCIVKFNR 481
RVQDF VGR GYG VKF+G+TDVR LDLD I++F R
Sbjct: 73 RVQDFTVGRFGYGRVKFLGDTDVRWLDLDQIIRFGR 108
>gb|EPS71530.1| hypothetical protein M569_03229, partial [Genlisea aurea]
Length = 1005
Score = 111 bits (277), Expect = 1e-22
Identities = 53/70 (75%), Positives = 60/70 (85%)
Frame = +2
Query: 272 VENSLPTLRCSDYYTKPCLSELAIRELMNPGYCSRVQDFVVGRVGYGCVKFIGETDVRCL 451
VEN LP +R SDYYT P L+ELAI EL +PGYCSRV+DFVVGRVGYGC+KF+ ETDVR L
Sbjct: 1 VENILPKIRQSDYYTVPSLTELAILELRSPGYCSRVRDFVVGRVGYGCIKFVDETDVRHL 60
Query: 452 DLDCIVKFNR 481
DL+ IVKFNR
Sbjct: 61 DLNSIVKFNR 70
>gb|EXB67202.1| Nuclear pore complex protein [Morus notabilis]
Length = 948
Score = 110 bits (274), Expect = 3e-22
Identities = 52/93 (55%), Positives = 68/93 (73%)
Frame = +2
Query: 203 QFKRRRISMDGADTSISCQLLHEVENSLPTLRCSDYYTKPCLSELAIRELMNPGYCSRVQ 382
++K+RRI ++ + S S ++L E+E SLPTL +YY +PC EL RELM+PGYCSRV
Sbjct: 40 EWKKRRIILN--ENSSSSEILREIEASLPTLHKPEYYMEPCFDELVQRELMDPGYCSRVP 97
Query: 383 DFVVGRVGYGCVKFIGETDVRCLDLDCIVKFNR 481
D +GR GYG VK++GETDVR LD+D IV F R
Sbjct: 98 DLTIGRYGYGSVKYVGETDVRLLDVDAIVTFGR 130
>ref|XP_002889279.1| hypothetical protein ARALYDRAFT_895920 [Arabidopsis lyrata subsp.
lyrata] gi|297335120|gb|EFH65538.1| hypothetical protein
ARALYDRAFT_895920 [Arabidopsis lyrata subsp. lyrata]
Length = 1045
Score = 108 bits (269), Expect = 1e-21
Identities = 51/91 (56%), Positives = 66/91 (72%)
Frame = +2
Query: 209 KRRRISMDGADTSISCQLLHEVENSLPTLRCSDYYTKPCLSELAIRELMNPGYCSRVQDF 388
K+RRIS+DG + C+ E+ +SLP L DY+ KPC+++L RE+ NP YCSRV DF
Sbjct: 23 KKRRISLDGI--AALCEHSKEIIDSLPMLNSPDYFLKPCMNDLVEREIKNPDYCSRVPDF 80
Query: 389 VVGRVGYGCVKFIGETDVRCLDLDCIVKFNR 481
+GR+GYG +KF+G TDVR LDLD IVKF R
Sbjct: 81 TIGRIGYGYIKFLGNTDVRRLDLDQIVKFRR 111
>ref|XP_002303836.1| PRECOCIOUS family protein [Populus trichocarpa]
gi|222841268|gb|EEE78815.1| PRECOCIOUS family protein
[Populus trichocarpa]
Length = 1067
Score = 107 bits (266), Expect = 2e-21
Identities = 54/96 (56%), Positives = 68/96 (70%)
Frame = +2
Query: 194 AQSQFKRRRISMDGADTSISCQLLHEVENSLPTLRCSDYYTKPCLSELAIRELMNPGYCS 373
++ Q+K+RR S+ C+ VE LPTLR DYY +PCL +LA E+++PGYCS
Sbjct: 40 SEGQYKKRRTSLKSEPR---CEDFRMVEALLPTLRSVDYYMEPCLMDLAAGEVVDPGYCS 96
Query: 374 RVQDFVVGRVGYGCVKFIGETDVRCLDLDCIVKFNR 481
RV DF VGR GYG VKF+G+TDVR L+LD IVKFNR
Sbjct: 97 RVLDFTVGRFGYGRVKFLGKTDVRRLNLDQIVKFNR 132
>ref|XP_006300673.1| hypothetical protein CARUB_v10019705mg [Capsella rubella]
gi|482569383|gb|EOA33571.1| hypothetical protein
CARUB_v10019705mg [Capsella rubella]
Length = 1046
Score = 106 bits (265), Expect = 3e-21
Identities = 53/91 (58%), Positives = 68/91 (74%)
Frame = +2
Query: 209 KRRRISMDGADTSISCQLLHEVENSLPTLRCSDYYTKPCLSELAIRELMNPGYCSRVQDF 388
K+RRIS+DG T++S + E+ +SLP L DY+ KPC++EL RE+ NP YCSRV DF
Sbjct: 23 KKRRISLDGV-TALS-EHSKEIIDSLPMLNSPDYFLKPCMNELIEREIENPDYCSRVPDF 80
Query: 389 VVGRVGYGCVKFIGETDVRCLDLDCIVKFNR 481
+GR+GYG +KF+G TDVR LDLD IVKF R
Sbjct: 81 TIGRIGYGYIKFLGNTDVRRLDLDQIVKFQR 111
>ref|XP_006389822.1| hypothetical protein EUTSA_v10018057mg [Eutrema salsugineum]
gi|557086256|gb|ESQ27108.1| hypothetical protein
EUTSA_v10018057mg [Eutrema salsugineum]
Length = 1042
Score = 106 bits (264), Expect = 4e-21
Identities = 52/91 (57%), Positives = 65/91 (71%)
Frame = +2
Query: 209 KRRRISMDGADTSISCQLLHEVENSLPTLRCSDYYTKPCLSELAIRELMNPGYCSRVQDF 388
K+RRIS+D + C+ ++ +SLPTL DY+ KP ++EL REL NP YCSRV DF
Sbjct: 19 KKRRISLDA--NPVVCEHYKDIRDSLPTLNSPDYFLKPSMNELVQRELENPDYCSRVPDF 76
Query: 389 VVGRVGYGCVKFIGETDVRCLDLDCIVKFNR 481
VGR+GYG +KF+G TDVR LDLD IVKF R
Sbjct: 77 TVGRIGYGYIKFLGCTDVRKLDLDQIVKFQR 107
>gb|AAF14656.1|AC011713_4 Identical to gi|1297187 nucleoprotein 98 homolog from Arabidopsis
thaliana cosmid gb|U53501. EST gb|W43800 comes from this
gene [Arabidopsis thaliana] gi|1297187|gb|AAA98914.1|
Theoretical protein with similarity to protein encoded
by GenBank Accession Number U41815, nucleoporin 98
[Arabidopsis thaliana]
Length = 850
Score = 106 bits (264), Expect = 4e-21
Identities = 50/91 (54%), Positives = 67/91 (73%)
Frame = +2
Query: 209 KRRRISMDGADTSISCQLLHEVENSLPTLRCSDYYTKPCLSELAIRELMNPGYCSRVQDF 388
K+RRIS+DG + C+ E+ +SLP L DY+ KPC++EL RE+ +P YCSRV DF
Sbjct: 16 KKRRISLDGI--AALCEHSKEIIDSLPMLNSPDYFLKPCINELVEREIESPDYCSRVPDF 73
Query: 389 VVGRVGYGCVKFIGETDVRCLDLDCIVKFNR 481
+GR+GYG ++F+G TDVR LDLD IVKF+R
Sbjct: 74 TIGRIGYGYIRFLGNTDVRRLDLDHIVKFHR 104
>ref|NP_178183.2| suppressor of auxin resistance 3 [Arabidopsis thaliana]
gi|22652299|gb|AAN03676.1|AF411839_1 putative
nucleoporin PRECOZ [Arabidopsis thaliana]
gi|61353788|gb|AAX44044.1| putative nucleoporin 96
[Arabidopsis thaliana] gi|332198315|gb|AEE36436.1|
suppressor of auxin resistance 3 [Arabidopsis thaliana]
Length = 1046
Score = 106 bits (264), Expect = 4e-21
Identities = 50/91 (54%), Positives = 67/91 (73%)
Frame = +2
Query: 209 KRRRISMDGADTSISCQLLHEVENSLPTLRCSDYYTKPCLSELAIRELMNPGYCSRVQDF 388
K+RRIS+DG + C+ E+ +SLP L DY+ KPC++EL RE+ +P YCSRV DF
Sbjct: 23 KKRRISLDGI--AALCEHSKEIIDSLPMLNSPDYFLKPCINELVEREIESPDYCSRVPDF 80
Query: 389 VVGRVGYGCVKFIGETDVRCLDLDCIVKFNR 481
+GR+GYG ++F+G TDVR LDLD IVKF+R
Sbjct: 81 TIGRIGYGYIRFLGNTDVRRLDLDHIVKFHR 111
>dbj|BAJ34529.1| unnamed protein product [Thellungiella halophila]
Length = 1042
Score = 106 bits (264), Expect = 4e-21
Identities = 52/91 (57%), Positives = 65/91 (71%)
Frame = +2
Query: 209 KRRRISMDGADTSISCQLLHEVENSLPTLRCSDYYTKPCLSELAIRELMNPGYCSRVQDF 388
K+RRIS+D + C+ ++ +SLPTL DY+ KP ++EL REL NP YCSRV DF
Sbjct: 19 KKRRISLDA--NPVVCEHYKDIRDSLPTLNSPDYFLKPSMNELVQRELENPDYCSRVPDF 76
Query: 389 VVGRVGYGCVKFIGETDVRCLDLDCIVKFNR 481
VGR+GYG +KF+G TDVR LDLD IVKF R
Sbjct: 77 TVGRIGYGYIKFLGCTDVRKLDLDQIVKFQR 107
>gb|AAN03675.1|AF411838_1 putative nucleoporin PRECOZ [Arabidopsis thaliana]
Length = 1046
Score = 106 bits (264), Expect = 4e-21
Identities = 50/91 (54%), Positives = 67/91 (73%)
Frame = +2
Query: 209 KRRRISMDGADTSISCQLLHEVENSLPTLRCSDYYTKPCLSELAIRELMNPGYCSRVQDF 388
K+RRIS+DG + C+ E+ +SLP L DY+ KPC++EL RE+ +P YCSRV DF
Sbjct: 23 KKRRISLDGI--AALCEHSKEIIDSLPMLNSPDYFLKPCINELVEREIESPDYCSRVPDF 80
Query: 389 VVGRVGYGCVKFIGETDVRCLDLDCIVKFNR 481
+GR+GYG ++F+G TDVR LDLD IVKF+R
Sbjct: 81 TIGRIGYGYIRFLGNTDVRRLDLDHIVKFHR 111
>ref|XP_006465209.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like [Citrus
sinensis]
Length = 1041
Score = 105 bits (262), Expect = 6e-21
Identities = 53/93 (56%), Positives = 69/93 (74%)
Frame = +2
Query: 203 QFKRRRISMDGADTSISCQLLHEVENSLPTLRCSDYYTKPCLSELAIRELMNPGYCSRVQ 382
Q+++R ISM+ S+SC++ E +SLP L DYYT+P L++L RE+++PGY SRV
Sbjct: 16 QYRKRNISMNAY--SLSCEISSENGDSLPVLCSPDYYTEPLLNDLGKREVIDPGYSSRVP 73
Query: 383 DFVVGRVGYGCVKFIGETDVRCLDLDCIVKFNR 481
DF VGR+GYG VKF+G TDVR LDLD IVKF R
Sbjct: 74 DFTVGRLGYGYVKFLGNTDVRWLDLDQIVKFGR 106
>ref|XP_006427580.1| hypothetical protein CICLE_v10024784mg [Citrus clementina]
gi|557529570|gb|ESR40820.1| hypothetical protein
CICLE_v10024784mg [Citrus clementina]
Length = 1041
Score = 104 bits (259), Expect = 1e-20
Identities = 53/93 (56%), Positives = 69/93 (74%)
Frame = +2
Query: 203 QFKRRRISMDGADTSISCQLLHEVENSLPTLRCSDYYTKPCLSELAIRELMNPGYCSRVQ 382
Q+++ ISM+ S+SC++ E +SLP L DYYT+P L++LA RE+++PGY SRV
Sbjct: 16 QYRKGNISMNAY--SLSCEISSENGDSLPVLCSPDYYTEPLLNDLAKREVIDPGYSSRVP 73
Query: 383 DFVVGRVGYGCVKFIGETDVRCLDLDCIVKFNR 481
DF VGR+GYG VKF+G TDVR LDLD IVKF R
Sbjct: 74 DFTVGRLGYGYVKFLGNTDVRWLDLDQIVKFGR 106
>gb|EOY26007.1| Suppressor of auxin resistance 3 [Theobroma cacao]
Length = 1069
Score = 101 bits (252), Expect = 9e-20
Identities = 49/94 (52%), Positives = 67/94 (71%)
Frame = +2
Query: 200 SQFKRRRISMDGADTSISCQLLHEVENSLPTLRCSDYYTKPCLSELAIRELMNPGYCSRV 379
S +K+R +S +S + +++ SLP+L SDYY +P L ++ ELM+PG+CSR+
Sbjct: 41 SLYKKRSLST--TTDFLSHYVSRKIKESLPSLHSSDYYMEPSLKDMVTLELMDPGFCSRI 98
Query: 380 QDFVVGRVGYGCVKFIGETDVRCLDLDCIVKFNR 481
DFVVGR+GYGCVKF G TDVR L+LD IVKF+R
Sbjct: 99 PDFVVGRIGYGCVKFFGNTDVRGLNLDQIVKFHR 132
>ref|XP_004140177.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like [Cucumis
sativus] gi|449481026|ref|XP_004156060.1| PREDICTED:
nuclear pore complex protein Nup98-Nup96-like [Cucumis
sativus]
Length = 1073
Score = 100 bits (248), Expect = 3e-19
Identities = 58/130 (44%), Positives = 76/130 (58%), Gaps = 11/130 (8%)
Frame = +2
Query: 125 LLS*NYSE-----------LSMEVDVGILKQMPAAQSQFKRRRISMDGADTSISCQLLHE 271
L+S N+SE +S D+ + A Q KRR+I+ D +S L E
Sbjct: 9 LVSENFSEDHDGKSYLPPFMSSRPDLDAMTSEDQATLQHKRRKIASDAGFSSHDH--LKE 66
Query: 272 VENSLPTLRCSDYYTKPCLSELAIRELMNPGYCSRVQDFVVGRVGYGCVKFIGETDVRCL 451
+NS PTL+ DYY P L E++I L +P Y S+V DF +GR GYG VKF G+TDVRCL
Sbjct: 67 HKNSFPTLQSPDYYISPSLEEMSIHVLKDPNYTSQVLDFTIGRCGYGSVKFFGKTDVRCL 126
Query: 452 DLDCIVKFNR 481
DLD IVKF++
Sbjct: 127 DLDQIVKFHK 136
>ref|XP_003544079.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X1
[Glycine max] gi|571506071|ref|XP_006595657.1|
PREDICTED: nuclear pore complex protein Nup98-Nup96-like
isoform X2 [Glycine max]
Length = 1022
Score = 99.0 bits (245), Expect = 6e-19
Identities = 57/109 (52%), Positives = 68/109 (62%)
Frame = +2
Query: 155 MEVDVGILKQMPAAQSQFKRRRISMDGADTSISCQLLHEVENSLPTLRCSDYYTKPCLSE 334
ME DVG + + KRRR+ SI ++ E E SLP L S YYTKP L E
Sbjct: 1 MECDVGGVSDSCILHT-CKRRRVYKGCFHPSID--IMTETEASLPILNSSGYYTKPSLKE 57
Query: 335 LAIRELMNPGYCSRVQDFVVGRVGYGCVKFIGETDVRCLDLDCIVKFNR 481
L REL+ PGYCSRV DF VGR GYG V+++ ETDVR L +D IVKF+R
Sbjct: 58 LVARELVEPGYCSRVPDFTVGRFGYGYVRYLNETDVRGLRIDEIVKFHR 106