BLASTX nr result
ID: Rehmannia23_contig00018786
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00018786
(446 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAH66715.1| OSIGBa0118P15.5 [Oryza sativa Indica Group] 45 2e-08
gb|AAP68389.1| putative polyprotein [Oryza sativa Japonica Group] 42 2e-08
gb|ABF98227.1| retrotransposon protein, putative, unclassified [... 42 2e-08
gb|AAP53789.1| retrotransposon protein, putative, unclassified [... 42 3e-08
gb|ABG22014.1| retrotransposon protein, putative, unclassified [... 43 7e-08
gb|ADB85304.1| putative retrotransposon protein [Phyllostachys e... 45 7e-08
emb|CAE04958.2| OSJNBa0070D17.9 [Oryza sativa Japonica Group] 40 3e-07
ref|XP_004295307.1| PREDICTED: uncharacterized protein LOC101309... 47 4e-07
gb|AAX95226.1| retrotransposon protein, putative, unclassified [... 40 7e-06
gb|ABA91843.2| retrotransposon protein, putative, unclassified [... 40 7e-06
ref|XP_006601642.1| PREDICTED: uncharacterized protein LOC100813... 40 8e-06
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas... 41 1e-05
>emb|CAH66715.1| OSIGBa0118P15.5 [Oryza sativa Indica Group]
Length = 1434
Score = 44.7 bits (104), Expect(2) = 2e-08
Identities = 21/40 (52%), Positives = 24/40 (60%)
Frame = -3
Query: 375 LDHPPGSRIHPVFHVLLLKKRISGEFVPSPELPLADSEGN 256
L P + IHPVFHV LKK + VP P LPL D +GN
Sbjct: 1358 LQLPEEAGIHPVFHVSQLKKHVGNLAVPLPNLPLVDEDGN 1397
Score = 38.9 bits (89), Expect(2) = 2e-08
Identities = 20/39 (51%), Positives = 23/39 (58%)
Frame = -2
Query: 262 GQFKIEPFRVLDRRDCIRKGEKVSQILVEWVNSSPEKAT 146
G K EP VL RR R+ E V+Q LV W N +PE AT
Sbjct: 1396 GNIKAEPVAVLARRVVPRRNEPVTQWLVHWENLTPEDAT 1434
>gb|AAP68389.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1246
Score = 42.4 bits (98), Expect(2) = 2e-08
Identities = 18/40 (45%), Positives = 25/40 (62%)
Frame = -3
Query: 378 RLDHPPGSRIHPVFHVLLLKKRISGEFVPSPELPLADSEG 259
+L P + IHPVFHV LKK + + +P P LPL ++G
Sbjct: 1153 KLQLPEEANIHPVFHVSQLKKHVGRQAIPLPNLPLVGADG 1192
Score = 41.2 bits (95), Expect(2) = 2e-08
Identities = 20/41 (48%), Positives = 24/41 (58%)
Frame = -2
Query: 262 GQFKIEPFRVLDRRDCIRKGEKVSQILVEWVNSSPEKATWK 140
G K EP VL RR R+ E V Q L+ W N +PE ATW+
Sbjct: 1192 GTVKTEPLAVLARRVIPRQNEPVVQWLIHWENLTPEDATWE 1232
>gb|ABF98227.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1160
Score = 42.4 bits (98), Expect(2) = 2e-08
Identities = 18/40 (45%), Positives = 25/40 (62%)
Frame = -3
Query: 378 RLDHPPGSRIHPVFHVLLLKKRISGEFVPSPELPLADSEG 259
+L P + IHPVFHV LKK + + +P P LPL ++G
Sbjct: 1067 KLQLPEEANIHPVFHVSQLKKHVGRQAIPLPNLPLVGADG 1106
Score = 41.2 bits (95), Expect(2) = 2e-08
Identities = 20/41 (48%), Positives = 24/41 (58%)
Frame = -2
Query: 262 GQFKIEPFRVLDRRDCIRKGEKVSQILVEWVNSSPEKATWK 140
G K EP VL RR R+ E V Q L+ W N +PE ATW+
Sbjct: 1106 GTVKTEPLAVLARRVIPRQNEPVVQWLIHWENLTPEDATWE 1146
>gb|AAP53789.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1611
Score = 41.6 bits (96), Expect(2) = 3e-08
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = -3
Query: 378 RLDHPPGSRIHPVFHVLLLKKRISGEFVPSPELPLADSEG 259
+L P G+ IHPVFHV LKK + +P P LP +G
Sbjct: 1518 KLQLPDGAGIHPVFHVSQLKKHLGARAIPMPNLPAIGPDG 1557
Score = 41.6 bits (96), Expect(2) = 3e-08
Identities = 20/41 (48%), Positives = 25/41 (60%)
Frame = -2
Query: 262 GQFKIEPFRVLDRRDCIRKGEKVSQILVEWVNSSPEKATWK 140
GQ K EP VL RR R E V+Q L+ W N +P +ATW+
Sbjct: 1557 GQIKTEPAAVLQRRMIPRHNEPVTQWLILWENLTPAEATWE 1597
>gb|ABG22014.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1422
Score = 43.1 bits (100), Expect(2) = 7e-08
Identities = 21/41 (51%), Positives = 25/41 (60%)
Frame = -2
Query: 262 GQFKIEPFRVLDRRDCIRKGEKVSQILVEWVNSSPEKATWK 140
GQ K EP ++ RR R+G V+Q LV W N SP ATWK
Sbjct: 1379 GQIKTEPVAIMRRRMIPRRGVAVTQWLVFWKNLSPADATWK 1419
Score = 38.9 bits (89), Expect(2) = 7e-08
Identities = 19/40 (47%), Positives = 22/40 (55%)
Frame = -3
Query: 378 RLDHPPGSRIHPVFHVLLLKKRISGEFVPSPELPLADSEG 259
+L P + IHPVFHV LKK + VP LP A EG
Sbjct: 1340 KLQLPAEALIHPVFHVSQLKKHLGSHAVPMANLPAAGPEG 1379
>gb|ADB85304.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 335
Score = 44.7 bits (104), Expect(2) = 7e-08
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = -2
Query: 262 GQFKIEPFRVLDRRDCIRKGEKVSQILVEWVNSSPEKAT 146
G+ K EP VLDRR R+ E V+Q+L++W+N PE AT
Sbjct: 297 GKIKTEPVVVLDRRIVPRRNEPVAQLLIQWLNLGPEDAT 335
Score = 37.4 bits (85), Expect(2) = 7e-08
Identities = 19/40 (47%), Positives = 21/40 (52%)
Frame = -3
Query: 378 RLDHPPGSRIHPVFHVLLLKKRISGEFVPSPELPLADSEG 259
RL P + IHPVFHV LKK + VP LPL G
Sbjct: 258 RLQLPEHTLIHPVFHVNQLKKHLGSHAVPLTGLPLVGENG 297
>emb|CAE04958.2| OSJNBa0070D17.9 [Oryza sativa Japonica Group]
Length = 394
Score = 40.4 bits (93), Expect(2) = 3e-07
Identities = 19/40 (47%), Positives = 22/40 (55%)
Frame = -3
Query: 378 RLDHPPGSRIHPVFHVLLLKKRISGEFVPSPELPLADSEG 259
RL P + IHPVFHV LKK + +P P LP EG
Sbjct: 301 RLQLPNDATIHPVFHVSQLKKHLGKRAIPMPNLPSVGPEG 340
Score = 39.3 bits (90), Expect(2) = 3e-07
Identities = 19/41 (46%), Positives = 23/41 (56%)
Frame = -2
Query: 262 GQFKIEPFRVLDRRDCIRKGEKVSQILVEWVNSSPEKATWK 140
GQ K +P VL RR R G V+Q L+ W N P ATW+
Sbjct: 340 GQIKTQPTAVLQRRMMPRNGVAVTQWLILWENLGPTDATWE 380
>ref|XP_004295307.1| PREDICTED: uncharacterized protein LOC101309522 [Fragaria vesca
subsp. vesca]
Length = 249
Score = 46.6 bits (109), Expect(2) = 4e-07
Identities = 24/41 (58%), Positives = 26/41 (63%)
Frame = -3
Query: 378 RLDHPPGSRIHPVFHVLLLKKRISGEFVPSPELPLADSEGN 256
RL PP S+IHPVFHV LLKKRI S LP DS G+
Sbjct: 145 RLKLPPNSKIHPVFHVSLLKKRIGEGLPVSTTLPQFDSSGD 185
Score = 33.1 bits (74), Expect(2) = 4e-07
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = -2
Query: 247 EPFRVLDRRDCIRKGEKVSQILVEWVNSSPEKATWK 140
+P RVLD +K ++++ LV+W + S E ATW+
Sbjct: 189 QPLRVLDMGVRTKKKQRITTWLVQWKSMSEEDATWE 224
>gb|AAX95226.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1513
Score = 39.7 bits (91), Expect(2) = 7e-06
Identities = 19/41 (46%), Positives = 23/41 (56%)
Frame = -2
Query: 262 GQFKIEPFRVLDRRDCIRKGEKVSQILVEWVNSSPEKATWK 140
GQ K +P VL RR R G V+Q L+ W N P ATW+
Sbjct: 1459 GQIKTQPVAVLQRRMIPRNGVAVTQWLILWENLGPADATWE 1499
Score = 35.4 bits (80), Expect(2) = 7e-06
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = -3
Query: 378 RLDHPPGSRIHPVFHVLLLKKRISGEFVPSPELPLADSEG 259
+L P + IHPVFHV LKK + VP LP +G
Sbjct: 1420 KLQLPEDASIHPVFHVSQLKKHLGQRAVPMSNLPSMGPDG 1459
>gb|ABA91843.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1411
Score = 39.7 bits (91), Expect(2) = 7e-06
Identities = 19/41 (46%), Positives = 23/41 (56%)
Frame = -2
Query: 262 GQFKIEPFRVLDRRDCIRKGEKVSQILVEWVNSSPEKATWK 140
GQ K +P VL RR R G V+Q L+ W N P ATW+
Sbjct: 1357 GQIKTQPVAVLQRRMIPRNGVAVTQWLILWENLGPADATWE 1397
Score = 35.4 bits (80), Expect(2) = 7e-06
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = -3
Query: 378 RLDHPPGSRIHPVFHVLLLKKRISGEFVPSPELPLADSEG 259
+L P + IHPVFHV LKK + VP LP +G
Sbjct: 1318 KLQLPEDASIHPVFHVSQLKKHLGQRAVPMSNLPSMGPDG 1357
>ref|XP_006601642.1| PREDICTED: uncharacterized protein LOC100813187 [Glycine max]
Length = 227
Score = 40.0 bits (92), Expect(2) = 8e-06
Identities = 16/37 (43%), Positives = 25/37 (67%)
Frame = -2
Query: 250 IEPFRVLDRRDCIRKGEKVSQILVEWVNSSPEKATWK 140
+EP VLD R +R +V Q+L++W +SP+KA W+
Sbjct: 103 VEPKAVLDSRVVLRDSSQVQQVLIQWELASPKKAMWE 139
Score = 35.0 bits (79), Expect(2) = 8e-06
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = -3
Query: 378 RLDHPPGSRIHPVFHVLLLKKRISGEFVPSPELPLADSE 262
+L P +RIHPVFH+ +LKK + P LPL S+
Sbjct: 60 KLKLPETTRIHPVFHISILKKFVGSSKQPYLPLPLTLSD 98
>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
finger, CCHC-type; Peptidase aspartic, active site;
Polynucleotidyl transferase, Ribonuclease H fold
[Medicago truncatula]
Length = 1297
Score = 40.8 bits (94), Expect(2) = 1e-05
Identities = 18/37 (48%), Positives = 24/37 (64%)
Frame = -2
Query: 250 IEPFRVLDRRDCIRKGEKVSQILVEWVNSSPEKATWK 140
IEP VL RR +GEK+ Q+LV W+ E+ATW+
Sbjct: 1205 IEPETVLTRRTIQVQGEKIDQVLVHWMGQKVEEATWE 1241
Score = 33.9 bits (76), Expect(2) = 1e-05
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = -3
Query: 378 RLDHPPGSRIHPVFHVLLLKKRISGEFVPSPELP 277
+L P GSR+H VFHV LLKK + G + LP
Sbjct: 1163 KLKLPEGSRVHSVFHVSLLKKAV-GNYHEEENLP 1195