BLASTX nr result
ID: Rehmannia23_contig00018706
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00018706
(308 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004241216.1| PREDICTED: pumilio homolog 2-like [Solanum l... 145 7e-33
ref|XP_002283191.1| PREDICTED: pumilio homolog 1-like [Vitis vin... 144 9e-33
emb|CAN61602.1| hypothetical protein VITISV_024967 [Vitis vinifera] 144 9e-33
ref|XP_006350784.1| PREDICTED: pumilio homolog 2-like isoform X2... 144 2e-32
ref|XP_006350783.1| PREDICTED: pumilio homolog 2-like isoform X1... 144 2e-32
ref|XP_004294652.1| PREDICTED: pumilio homolog 2-like [Fragaria ... 140 2e-31
ref|XP_006358700.1| PREDICTED: pumilio homolog 2-like [Solanum t... 137 1e-30
ref|XP_004240371.1| PREDICTED: pumilio homolog 2-like [Solanum l... 137 1e-30
gb|EMJ09319.1| hypothetical protein PRUPE_ppa000627mg [Prunus pe... 137 1e-30
ref|XP_002299859.2| pumilio/Puf RNA-binding domain-containing fa... 137 2e-30
ref|XP_004486985.1| PREDICTED: pumilio homolog 2-like [Cicer ari... 130 2e-28
gb|EOY33975.1| Pumilio 2 isoform 3 [Theobroma cacao] 129 4e-28
gb|EOY33974.1| Pumilio 2 isoform 2 [Theobroma cacao] 129 4e-28
gb|EOY33973.1| Pumilio 2 isoform 1 [Theobroma cacao] 129 4e-28
ref|XP_003547219.1| PREDICTED: pumilio homolog 2-like [Glycine max] 128 7e-28
gb|EXC10703.1| Pumilio-2-like protein [Morus notabilis] 128 9e-28
ref|XP_006424877.1| hypothetical protein CICLE_v10027726mg [Citr... 125 4e-27
ref|XP_006424876.1| hypothetical protein CICLE_v10027726mg [Citr... 125 4e-27
ref|XP_004160189.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homo... 125 4e-27
ref|XP_004143128.1| PREDICTED: pumilio homolog 1-like [Cucumis s... 125 4e-27
>ref|XP_004241216.1| PREDICTED: pumilio homolog 2-like [Solanum lycopersicum]
Length = 993
Score = 145 bits (365), Expect = 7e-33
Identities = 74/106 (69%), Positives = 87/106 (82%), Gaps = 4/106 (3%)
Frame = +2
Query: 2 GLPGLGLGSKQKSIAELFQEDLNRATPASGHPSRPASRNAFDDNASAMGSVEAELAHLRR 181
GLPGLGLGSKQKSIAE+FQ+DL+RATPA G PSRPASRNAFD+++ +GS EAEL+HLR
Sbjct: 175 GLPGLGLGSKQKSIAEIFQDDLSRATPAPGPPSRPASRNAFDESSDNLGSAEAELSHLRH 234
Query: 182 DLASSDPLHSTQNIQSSSAV----TPASYSYAAVLGASLSRSSTPD 307
+ ++SDPL S N Q SS V PAS+SYAA LGASLSRS+TPD
Sbjct: 235 EFSTSDPLRSVSNGQGSSGVQHVGAPASFSYAAALGASLSRSTTPD 280
>ref|XP_002283191.1| PREDICTED: pumilio homolog 1-like [Vitis vinifera]
Length = 1065
Score = 144 bits (364), Expect = 9e-33
Identities = 73/106 (68%), Positives = 85/106 (80%), Gaps = 4/106 (3%)
Frame = +2
Query: 2 GLPGLGLGSKQKSIAELFQEDLNRATPASGHPSRPASRNAFDDNASAMGSVEAELAHLRR 181
GL GLGLGSKQKS+AE+FQ+DL R TP SGHPSRPASRNAFD+NA +GSVEAEL HLRR
Sbjct: 190 GLSGLGLGSKQKSLAEIFQDDLGRTTPVSGHPSRPASRNAFDENAEPLGSVEAELGHLRR 249
Query: 182 DLASSDPLHSTQNIQSSSAV----TPASYSYAAVLGASLSRSSTPD 307
+L S+D L S ++Q SS V P SY+YA+VLG SLSRS+TPD
Sbjct: 250 ELKSADVLRSGASVQGSSTVQNIGAPTSYTYASVLGGSLSRSTTPD 295
>emb|CAN61602.1| hypothetical protein VITISV_024967 [Vitis vinifera]
Length = 1039
Score = 144 bits (364), Expect = 9e-33
Identities = 73/106 (68%), Positives = 85/106 (80%), Gaps = 4/106 (3%)
Frame = +2
Query: 2 GLPGLGLGSKQKSIAELFQEDLNRATPASGHPSRPASRNAFDDNASAMGSVEAELAHLRR 181
GL GLGLGSKQKS+AE+FQ+DL R TP SGHPSRPASRNAFD+NA +GSVEAEL HLRR
Sbjct: 164 GLSGLGLGSKQKSLAEIFQDDLGRTTPVSGHPSRPASRNAFDENAEPLGSVEAELGHLRR 223
Query: 182 DLASSDPLHSTQNIQSSSAV----TPASYSYAAVLGASLSRSSTPD 307
+L S+D L S ++Q SS V P SY+YA+VLG SLSRS+TPD
Sbjct: 224 ELKSADVLRSGASVQGSSTVQNIGAPTSYTYASVLGGSLSRSTTPD 269
>ref|XP_006350784.1| PREDICTED: pumilio homolog 2-like isoform X2 [Solanum tuberosum]
Length = 942
Score = 144 bits (362), Expect = 2e-32
Identities = 73/106 (68%), Positives = 87/106 (82%), Gaps = 4/106 (3%)
Frame = +2
Query: 2 GLPGLGLGSKQKSIAELFQEDLNRATPASGHPSRPASRNAFDDNASAMGSVEAELAHLRR 181
GLPGLGLGSKQKSIAE+FQ+DL+RATPA G PSRPASRNAFD+++ +GS EAEL+HLR
Sbjct: 175 GLPGLGLGSKQKSIAEIFQDDLSRATPAPGPPSRPASRNAFDESSDNLGSAEAELSHLRH 234
Query: 182 DLASSDPLHSTQNIQSSSAV----TPASYSYAAVLGASLSRSSTPD 307
+ ++SDPL S N Q SSA PAS++YAA LGASLSRS+TPD
Sbjct: 235 EFSTSDPLRSVSNGQGSSAAQHVGAPASFTYAAALGASLSRSTTPD 280
>ref|XP_006350783.1| PREDICTED: pumilio homolog 2-like isoform X1 [Solanum tuberosum]
Length = 993
Score = 144 bits (362), Expect = 2e-32
Identities = 73/106 (68%), Positives = 87/106 (82%), Gaps = 4/106 (3%)
Frame = +2
Query: 2 GLPGLGLGSKQKSIAELFQEDLNRATPASGHPSRPASRNAFDDNASAMGSVEAELAHLRR 181
GLPGLGLGSKQKSIAE+FQ+DL+RATPA G PSRPASRNAFD+++ +GS EAEL+HLR
Sbjct: 175 GLPGLGLGSKQKSIAEIFQDDLSRATPAPGPPSRPASRNAFDESSDNLGSAEAELSHLRH 234
Query: 182 DLASSDPLHSTQNIQSSSAV----TPASYSYAAVLGASLSRSSTPD 307
+ ++SDPL S N Q SSA PAS++YAA LGASLSRS+TPD
Sbjct: 235 EFSTSDPLRSVSNGQGSSAAQHVGAPASFTYAAALGASLSRSTTPD 280
>ref|XP_004294652.1| PREDICTED: pumilio homolog 2-like [Fragaria vesca subsp. vesca]
Length = 1077
Score = 140 bits (352), Expect = 2e-31
Identities = 71/105 (67%), Positives = 84/105 (80%), Gaps = 3/105 (2%)
Frame = +2
Query: 2 GLPGLGLGSKQKSIAELFQEDLNRATPASGHPSRPASRNAFDDNASAMGSVEAELAHLRR 181
GLPGLGLG+KQKS+AE+FQ+D+ R TP G PSRPASRNAFD+N A+GS EA+L HLRR
Sbjct: 202 GLPGLGLGNKQKSLAEIFQDDMGRTTPVPGLPSRPASRNAFDENVEALGSAEADLTHLRR 261
Query: 182 DLASSDPLHSTQNIQSSSAVT---PASYSYAAVLGASLSRSSTPD 307
DL +SD L S N Q S+A + P+SYSYAA LGASLSRS+TPD
Sbjct: 262 DLMTSDALRSGANGQGSAAQSMGPPSSYSYAAALGASLSRSTTPD 306
>ref|XP_006358700.1| PREDICTED: pumilio homolog 2-like [Solanum tuberosum]
Length = 972
Score = 137 bits (346), Expect = 1e-30
Identities = 69/106 (65%), Positives = 82/106 (77%), Gaps = 4/106 (3%)
Frame = +2
Query: 2 GLPGLGLGSKQKSIAELFQEDLNRATPASGHPSRPASRNAFDDNASAMGSVEAELAHLRR 181
GLPGLGLGSK+KSIAE+FQ+D +R +PA GHPSRPASRNAFD N +GS EAEL+HLR
Sbjct: 174 GLPGLGLGSKKKSIAEMFQDDFSRVSPAPGHPSRPASRNAFDGNGDIIGSAEAELSHLRH 233
Query: 182 DLASSDPLHSTQNIQSSSAV----TPASYSYAAVLGASLSRSSTPD 307
+++SS P+ S + Q SA P SYSYAA LGASLSRS+TPD
Sbjct: 234 EVSSSKPIRSASSTQIPSAAQHDEVPTSYSYAAALGASLSRSTTPD 279
>ref|XP_004240371.1| PREDICTED: pumilio homolog 2-like [Solanum lycopersicum]
Length = 1000
Score = 137 bits (346), Expect = 1e-30
Identities = 69/106 (65%), Positives = 83/106 (78%), Gaps = 4/106 (3%)
Frame = +2
Query: 2 GLPGLGLGSKQKSIAELFQEDLNRATPASGHPSRPASRNAFDDNASAMGSVEAELAHLRR 181
GLPGLGLGSK+KSIAE+FQ+D +R +PA GHPSRPASRNAFD +A +GSVE EL+HLR
Sbjct: 174 GLPGLGLGSKKKSIAEMFQDDFSRVSPAPGHPSRPASRNAFDGSADTIGSVEGELSHLRH 233
Query: 182 DLASSDPLHSTQNIQSSSAV----TPASYSYAAVLGASLSRSSTPD 307
+++SS P+ S + Q SA P SYSYAA LGASLSRS+TPD
Sbjct: 234 EVSSSKPIRSASSTQIPSAAQHDEVPTSYSYAAALGASLSRSTTPD 279
>gb|EMJ09319.1| hypothetical protein PRUPE_ppa000627mg [Prunus persica]
Length = 1062
Score = 137 bits (345), Expect = 1e-30
Identities = 73/106 (68%), Positives = 85/106 (80%), Gaps = 4/106 (3%)
Frame = +2
Query: 2 GLPGLGLGSKQKSIAELFQEDLNRATPASGHPSRPASRNAFDDNASAMGSVEAELAHLRR 181
GLPGLGLG+KQKS+AE+FQ+DL RA+P SG PSRPASRNAFD+N GS EA+LAHLRR
Sbjct: 196 GLPGLGLGNKQKSLAEIFQDDLGRASPVSGLPSRPASRNAFDENVD--GSAEADLAHLRR 253
Query: 182 DLASSDPLHSTQNIQSSSAV----TPASYSYAAVLGASLSRSSTPD 307
D+ +SD L S+ N Q SSA P+SYSYAA LGASLSRS+TPD
Sbjct: 254 DVMASDGLRSSANGQGSSAAQSMGPPSSYSYAAALGASLSRSTTPD 299
>ref|XP_002299859.2| pumilio/Puf RNA-binding domain-containing family protein [Populus
trichocarpa] gi|550348126|gb|EEE84664.2| pumilio/Puf
RNA-binding domain-containing family protein [Populus
trichocarpa]
Length = 1065
Score = 137 bits (344), Expect = 2e-30
Identities = 72/105 (68%), Positives = 82/105 (78%), Gaps = 3/105 (2%)
Frame = +2
Query: 2 GLPGLGLGSKQKSIAELFQEDLNRATPASGHPSRPASRNAFDDNASAMGSVEAELAHLRR 181
GLPGLGL SKQKS AE+FQ+DL RATP +G PSRPASRNAF++N +GS EAELAHLRR
Sbjct: 193 GLPGLGLASKQKSFAEIFQDDLGRATPVTGPPSRPASRNAFNENVETLGSAEAELAHLRR 252
Query: 182 DLASSDPLHSTQNIQSSSAVT---PASYSYAAVLGASLSRSSTPD 307
+L+S+D L S N Q SS V SYSYAA LGASLSRS+TPD
Sbjct: 253 ELSSADTLRSGANGQGSSPVQNIGQPSYSYAAALGASLSRSTTPD 297
>ref|XP_004486985.1| PREDICTED: pumilio homolog 2-like [Cicer arietinum]
Length = 1050
Score = 130 bits (326), Expect = 2e-28
Identities = 67/106 (63%), Positives = 79/106 (74%), Gaps = 4/106 (3%)
Frame = +2
Query: 2 GLPGLGLGSKQKSIAELFQEDLNRATPASGHPSRPASRNAFDDNASAMGSVEAELAHLRR 181
GLPG GLG+KQKS+AE+FQ+DL RATP +G PSRPASRNAFD+N S EAELAHLR
Sbjct: 191 GLPGPGLGTKQKSLAEIFQDDLGRATPVTGFPSRPASRNAFDENVEITSSAEAELAHLRH 250
Query: 182 DLASSDPLHSTQNIQSSSAV----TPASYSYAAVLGASLSRSSTPD 307
D + +D L S N+Q S A ASYSYAA LG+SLS+S+TPD
Sbjct: 251 DSSVTDALRSGSNVQGSPAAQNVGPQASYSYAAALGSSLSQSTTPD 296
>gb|EOY33975.1| Pumilio 2 isoform 3 [Theobroma cacao]
Length = 945
Score = 129 bits (324), Expect = 4e-28
Identities = 67/106 (63%), Positives = 82/106 (77%), Gaps = 4/106 (3%)
Frame = +2
Query: 2 GLPGLGLGSKQKSIAELFQEDLNRATPASGHPSRPASRNAFDDNASAMGSVEAELAHLRR 181
GL G+GLGSKQKS+AE+FQ+DL + P + PSRPASRNAFD+N +GS E+ELAHLRR
Sbjct: 204 GLSGIGLGSKQKSLAEIFQDDLGHSAPVTRIPSRPASRNAFDENFENVGSAESELAHLRR 263
Query: 182 DLASSDPLHSTQNIQSSSAV----TPASYSYAAVLGASLSRSSTPD 307
+L S D L S+ + Q SSAV P+SYSYAA +GASLSRS+TPD
Sbjct: 264 ELTSGDTLRSSASGQGSSAVHSIGPPSSYSYAAAVGASLSRSTTPD 309
>gb|EOY33974.1| Pumilio 2 isoform 2 [Theobroma cacao]
Length = 1067
Score = 129 bits (324), Expect = 4e-28
Identities = 67/106 (63%), Positives = 82/106 (77%), Gaps = 4/106 (3%)
Frame = +2
Query: 2 GLPGLGLGSKQKSIAELFQEDLNRATPASGHPSRPASRNAFDDNASAMGSVEAELAHLRR 181
GL G+GLGSKQKS+AE+FQ+DL + P + PSRPASRNAFD+N +GS E+ELAHLRR
Sbjct: 204 GLSGIGLGSKQKSLAEIFQDDLGHSAPVTRIPSRPASRNAFDENFENVGSAESELAHLRR 263
Query: 182 DLASSDPLHSTQNIQSSSAV----TPASYSYAAVLGASLSRSSTPD 307
+L S D L S+ + Q SSAV P+SYSYAA +GASLSRS+TPD
Sbjct: 264 ELTSGDTLRSSASGQGSSAVHSIGPPSSYSYAAAVGASLSRSTTPD 309
>gb|EOY33973.1| Pumilio 2 isoform 1 [Theobroma cacao]
Length = 1067
Score = 129 bits (324), Expect = 4e-28
Identities = 67/106 (63%), Positives = 82/106 (77%), Gaps = 4/106 (3%)
Frame = +2
Query: 2 GLPGLGLGSKQKSIAELFQEDLNRATPASGHPSRPASRNAFDDNASAMGSVEAELAHLRR 181
GL G+GLGSKQKS+AE+FQ+DL + P + PSRPASRNAFD+N +GS E+ELAHLRR
Sbjct: 204 GLSGIGLGSKQKSLAEIFQDDLGHSAPVTRIPSRPASRNAFDENFENVGSAESELAHLRR 263
Query: 182 DLASSDPLHSTQNIQSSSAV----TPASYSYAAVLGASLSRSSTPD 307
+L S D L S+ + Q SSAV P+SYSYAA +GASLSRS+TPD
Sbjct: 264 ELTSGDTLRSSASGQGSSAVHSIGPPSSYSYAAAVGASLSRSTTPD 309
>ref|XP_003547219.1| PREDICTED: pumilio homolog 2-like [Glycine max]
Length = 1054
Score = 128 bits (322), Expect = 7e-28
Identities = 67/106 (63%), Positives = 79/106 (74%), Gaps = 4/106 (3%)
Frame = +2
Query: 2 GLPGLGLGSKQKSIAELFQEDLNRATPASGHPSRPASRNAFDDNASAMGSVEAELAHLRR 181
GLPGLGLGSKQKS+AE+FQ+DL +G PSRPASRNAFD+N + SVE+ELAHLRR
Sbjct: 198 GLPGLGLGSKQKSLAEIFQDDLGLNASVTGFPSRPASRNAFDENGDIISSVESELAHLRR 257
Query: 182 DLASSDPLHSTQNIQSSSAV----TPASYSYAAVLGASLSRSSTPD 307
D ++D L S N+ SSA ASYSYAA LG+SLSRS+TPD
Sbjct: 258 DSLATDTLRSVSNVPVSSAAQNTGPQASYSYAAALGSSLSRSTTPD 303
>gb|EXC10703.1| Pumilio-2-like protein [Morus notabilis]
Length = 1062
Score = 128 bits (321), Expect = 9e-28
Identities = 68/107 (63%), Positives = 81/107 (75%), Gaps = 5/107 (4%)
Frame = +2
Query: 2 GLPGLGLGSKQKSIAELFQEDLNRATPASGHPSRPASRNAFDDNASAMGSVEAELAHLRR 181
GL GLGLG+KQKS+AE+ Q+DL RATP SG PSRPASRNAFD+N + SV+A+L HL
Sbjct: 198 GLAGLGLGNKQKSLAEIIQDDLGRATPVSGLPSRPASRNAFDENVDTVSSVDADLVHLHH 257
Query: 182 DLASSDPLHSTQN-IQSSSAV----TPASYSYAAVLGASLSRSSTPD 307
DL +SD L S N I+ SS V P+SY+YAA LGASLSRS+TPD
Sbjct: 258 DLRNSDTLQSGANGIKGSSVVQSMGAPSSYTYAAALGASLSRSTTPD 304
>ref|XP_006424877.1| hypothetical protein CICLE_v10027726mg [Citrus clementina]
gi|557526811|gb|ESR38117.1| hypothetical protein
CICLE_v10027726mg [Citrus clementina]
Length = 1003
Score = 125 bits (315), Expect = 4e-27
Identities = 63/102 (61%), Positives = 81/102 (79%)
Frame = +2
Query: 2 GLPGLGLGSKQKSIAELFQEDLNRATPASGHPSRPASRNAFDDNASAMGSVEAELAHLRR 181
GL G+GLGSKQKS+AE+FQ+DL RATP +G+PSRPASRNAFD++ ++ S EAELA+LR
Sbjct: 198 GLSGIGLGSKQKSLAEIFQDDLGRATPVTGNPSRPASRNAFDESIESISSAEAELANLRH 257
Query: 182 DLASSDPLHSTQNIQSSSAVTPASYSYAAVLGASLSRSSTPD 307
DL S + T +Q+ P+SY+YAAVLG+SLSRS+TPD
Sbjct: 258 DLKSGANVQGTSAVQTIG--PPSSYTYAAVLGSSLSRSTTPD 297
>ref|XP_006424876.1| hypothetical protein CICLE_v10027726mg [Citrus clementina]
gi|568870351|ref|XP_006488369.1| PREDICTED: pumilio
homolog 2-like [Citrus sinensis]
gi|557526810|gb|ESR38116.1| hypothetical protein
CICLE_v10027726mg [Citrus clementina]
Length = 1058
Score = 125 bits (315), Expect = 4e-27
Identities = 63/102 (61%), Positives = 81/102 (79%)
Frame = +2
Query: 2 GLPGLGLGSKQKSIAELFQEDLNRATPASGHPSRPASRNAFDDNASAMGSVEAELAHLRR 181
GL G+GLGSKQKS+AE+FQ+DL RATP +G+PSRPASRNAFD++ ++ S EAELA+LR
Sbjct: 198 GLSGIGLGSKQKSLAEIFQDDLGRATPVTGNPSRPASRNAFDESIESISSAEAELANLRH 257
Query: 182 DLASSDPLHSTQNIQSSSAVTPASYSYAAVLGASLSRSSTPD 307
DL S + T +Q+ P+SY+YAAVLG+SLSRS+TPD
Sbjct: 258 DLKSGANVQGTSAVQTIG--PPSSYTYAAVLGSSLSRSTTPD 297
>ref|XP_004160189.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 1-like [Cucumis
sativus]
Length = 1043
Score = 125 bits (315), Expect = 4e-27
Identities = 66/106 (62%), Positives = 82/106 (77%), Gaps = 4/106 (3%)
Frame = +2
Query: 2 GLPGLGLGSKQKSIAELFQEDLNRATPASGHPSRPASRNAFDDNASAMGSVEAELAHLRR 181
GLPGLGLG+KQKS+AE+FQ+D+ R TP +G PSRPASRNAFDDN MG+ + ELA+LR
Sbjct: 184 GLPGLGLGTKQKSLAEIFQDDMGRTTPVTGLPSRPASRNAFDDNVETMGATD-ELANLRH 242
Query: 182 DLASSDPLHSTQNIQSSSA----VTPASYSYAAVLGASLSRSSTPD 307
DL S+ + + N QSSSA P+SY+YAA +GASLSRS+TPD
Sbjct: 243 DLMISEVMRTGANGQSSSAGQSIGAPSSYTYAAAVGASLSRSNTPD 288
>ref|XP_004143128.1| PREDICTED: pumilio homolog 1-like [Cucumis sativus]
Length = 1043
Score = 125 bits (315), Expect = 4e-27
Identities = 66/106 (62%), Positives = 82/106 (77%), Gaps = 4/106 (3%)
Frame = +2
Query: 2 GLPGLGLGSKQKSIAELFQEDLNRATPASGHPSRPASRNAFDDNASAMGSVEAELAHLRR 181
GLPGLGLG+KQKS+AE+FQ+D+ R TP +G PSRPASRNAFDDN MG+ + ELA+LR
Sbjct: 184 GLPGLGLGTKQKSLAEIFQDDMGRTTPVTGLPSRPASRNAFDDNVETMGATD-ELANLRH 242
Query: 182 DLASSDPLHSTQNIQSSSA----VTPASYSYAAVLGASLSRSSTPD 307
DL S+ + + N QSSSA P+SY+YAA +GASLSRS+TPD
Sbjct: 243 DLMISEVMRTGANGQSSSAGQSIGAPSSYTYAAAVGASLSRSNTPD 288